CANDIDATE ID: 1089

CANDIDATE ID: 1089

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9957217e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7352 (bamD) (bamD)
   Products of gene:
     - G7352-MONOMER (BamD)
     - CPLX0-3933 (Outer Membrane Protein Assembly Complex)

- EG12098 (rluD) (b2594)
   Products of gene:
     - EG12098-MONOMER (23S rRNA pseudouridine synthase)
       Reactions:
        rRNA  ->  rRNA containing pseudouridine

- EG12097 (yfiH) (b2593)
   Products of gene:
     - EG12097-MONOMER (conserved protein)

- EG10157 (clpB) (b2592)
   Products of gene:
     - EG10157-MONOMER (ClpB chaperone)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 317
Effective number of orgs (counting one per cluster within 468 clusters): 223

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TROS309801 ncbi Thermomicrobium roseum DSM 51593
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSP84588 ncbi Synechococcus sp. WH 81023
SSP644076 Silicibacter sp. TrichCH4B4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP292414 ncbi Ruegeria sp. TM10404
SSP1131 Synechococcus sp. CC96053
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SRUB309807 ncbi Salinibacter ruber DSM 138553
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122283
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB4
RTYP257363 ncbi Rickettsia typhi Wilmington4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RRIC452659 ncbi Rickettsia rickettsii Iowa4
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith4
RPRO272947 ncbi Rickettsia prowazekii Madrid E3
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RMAS416276 ncbi Rickettsia massiliae MTU54
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38413
RFER338969 ncbi Rhodoferax ferrireducens T1184
RFEL315456 ncbi Rickettsia felis URRWXCal23
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 423
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
RCON272944 ncbi Rickettsia conorii Malish 74
RCAN293613 ncbi Rickettsia canadensis McKiel4
RBEL391896 ncbi Rickettsia bellii OSU 85-3894
RBEL336407 ncbi Rickettsia bellii RML369-C4
RAKA293614 ncbi Rickettsia akari Hartford4
PTHE370438 ncbi Pelotomaculum thermopropionicum SI3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.3
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13753
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PINT246198 Prevotella intermedia 173
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X143
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16223
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC13
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS103
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-003
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HNEP81032 Hyphomonas neptunium3
HMOD498761 ncbi Heliobacterium modesticaldum Ice13
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237793
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-23
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4263
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y513
DGEO319795 ncbi Deinococcus geothermalis DSM 113003
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CSP78 Caulobacter sp.3
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPHY357809 ncbi Clostridium phytofermentans ISDg3
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CDIF272563 ncbi Clostridium difficile 6303
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C3
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland3
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
CBOT36826 Clostridium botulinum A3
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CAULO ncbi Caulobacter crescentus CB154
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054763
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54823
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BQUI283165 ncbi Bartonella quintana Toulouse3
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-13
BFRA295405 ncbi Bacteroides fragilis YCH463
BFRA272559 ncbi Bacteroides fragilis NCTC 93433
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCER315749 ncbi Bacillus cytotoxicus NVH 391-983
BCER288681 ncbi Bacillus cereus E33L3
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5833
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1003
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  G7352   EG12098   EG12097   EG10157   
ZMOB264203 ZMO1758ZMO0750ZMO1723ZMO1424
YPSE349747 YPSIP31758_3215YPSIP31758_3214YPSIP31758_3213YPSIP31758_3212
YPSE273123 YPTB0845YPTB0846YPTB0847YPTB0848
YPES386656 YPDSF_2914YPDSF_2913YPDSF_2912YPDSF_2911
YPES377628 YPN_0818YPN_0819YPN_0820YPN_0821
YPES360102 YPA_2769YPA_2768YPA_2767YPA_2766
YPES349746 YPANGOLA_A3478YPANGOLA_A3477YPANGOLA_A3476YPANGOLA_A3475
YPES214092 YPO3278YPO3277YPO3276YPO3275
YPES187410 Y0911Y0912Y0913Y0914
YENT393305 YE0890YE0891YE0892YE0893
XORY360094 XOOORF_1542XOOORF_1543XOOORF_1544XOOORF_3981
XORY342109 XOO1480XOO1481XOO1482XOO1229
XORY291331 XOO1596XOO1597XOO1598XOO1337
XFAS405440 XFASM12_1919XFASM12_1918XFASM12_1917XFASM12_1850
XFAS183190 PD_1756PD_1755PD_1754PD_1685
XFAS160492 XF0938XF0939XF0940XF0381
XCAM487884 XCC-B100_1102XCC-B100_1103XCC-B100_1104XCC-B100_1123
XCAM316273 XCAORF_3431XCAORF_3429XCAORF_3428XCAORF_3408
XCAM314565 XC_1069XC_1070XC_1071XC_1088
XCAM190485 XCC3089XCC3088XCC3087XCC3070
XAXO190486 XAC3218XAC3217XAC3216XAC3195
XAUT78245 XAUT_0330XAUT_1985XAUT_2550XAUT_1902
VVUL216895 VV1_0485VV1_0484VV1_0483VV1_0482
VVUL196600 VV0712VV0713VV0714VV0715
VPAR223926 VP0558VP0559VP0560VP0561
VFIS312309 VF0563VF0564VF0565VF0566
VEIS391735 VEIS_4485VEIS_0087VEIS_3820VEIS_3599
VCHO345073 VC0395_A0237VC0395_A0238VC0395_A0239VC0395_A0240
VCHO VC0708VC0709VC0710VC0711
TTUR377629 TERTU_1052TERTU_1054TERTU_1055TERTU_1057
TROS309801 TRD_1032TRD_0820TRD_0443
TDEN292415 TBD_0809TBD_0810TBD_0811TBD_0815
TCRU317025 TCR_1371TCR_1370TCR_1369TCR_0414
SWOL335541 SWOL_1286SWOL_0015SWOL_0493
STYP99287 STM2663STM2662STM2661STM2660
SSP94122 SHEWANA3_3172SHEWANA3_3171SHEWANA3_3170SHEWANA3_3169
SSP84588 SYNW2326OR2545SYNW1742OR0609SYNW1503OR0438
SSP644076 SCH4B_4012SCH4B_1573SCH4B_3926SCH4B_3513
SSP321327 CYA_0740CYA_1715CYA_0180
SSP292414 TM1040_0691TM1040_2118TM1040_0618TM1040_0130
SSP1131 SYNCC9605_2457SYNCC9605_0724SYNCC9605_1007
SSON300269 SSO_2721SSO_2720SSO_2719SSO_2718
SSED425104 SSED_3500SSED_3499SSED_3498SSED_3497
SRUB309807 SRU_2073SRU_2231SRU_2833
SPRO399741 SPRO_0883SPRO_0884SPRO_0885SPRO_0886
SPEA398579 SPEA_3167SPEA_3166SPEA_3165SPEA_3164
SONE211586 SO_3580SO_3579SO_3578SO_3577
SMEL266834 SMC01876SMC02683SMC02433
SMED366394 SMED_2072SMED_2254SMED_2499
SLOI323850 SHEW_2951SHEW_2950SHEW_2949SHEW_2948
SLAC55218 SL1157_3402SL1157_3240SL1157_2006SL1157_0934
SHIGELLA S2828SFHBYFIHCLPB
SHAL458817 SHAL_3249SHAL_3248SHAL_3247SHAL_3246
SGLO343509 SG0582SG0583SG1321SG0584
SFUM335543 SFUM_1710SFUM_3657SFUM_2852SFUM_0263
SFLE373384 SFV_2657SFV_2658SFV_2659SFV_2660
SFLE198214 AAN44148.1AAN44149.1AAN44150.1AAN44151.1
SEPI176280 SE_0872SE_0862SE_0674
SENT454169 SEHA_C2880SEHA_C2879SEHA_C2878SEHA_C2877
SENT321314 SCH_2666SCH_2665SCH_2664SCH_2663
SENT295319 SPA2524SPA2523SPA2522SPA2521
SENT220341 STY2852STY2851STY2850STY2849
SENT209261 T2619T2618T2617T2616
SDYS300267 SDY_2838SDY_2837SDY_2836SDY_2835
SDEN318161 SDEN_2864SDEN_2863SDEN_2862SDEN_2861
SDEG203122 SDE_2552SDE_2551SDE_2550SDE_2548
SBOY300268 SBO_2630SBO_2629SBO_2628SBO_2627
SBAL402882 SHEW185_1085SHEW185_1086SHEW185_1087SHEW185_1088
SBAL399599 SBAL195_1118SBAL195_1119SBAL195_1120SBAL195_1121
SALA317655 SALA_0545SALA_1742SALA_0485SALA_0406
SACI56780 SYN_00044SYN_01800SYN_01799SYN_02525
RTYP257363 RT0174RT0834RT0481RT0094
RSPH349102 RSPH17025_0702RSPH17025_1573RSPH17025_0258RSPH17025_2815
RSPH349101 RSPH17029_0792RSPH17029_1072RSPH17029_0230RSPH17029_0075
RSPH272943 RSP_2117RSP_2409RSP_1578RSP_1408
RSOL267608 RSC1627RSC1628RSC1629RSC1335
RRUB269796 RRU_A0941RRU_A1111RRU_A0643RRU_A0753
RRIC452659 RRIOWA_0285RRIOWA_1537RRIOWA_0800RRIOWA_0079
RRIC392021 A1G_01315A1G_07185A1G_03810A1G_00380
RPRO272947 RP183RP494RP036
RPOM246200 SPO_1206SPO_1408SPO_0906SPO_3276
RPAL316058 RPB_2006RPB_0454RPB_4166RPB_4247
RPAL316057 RPD_3384RPD_0359RPD_3877RPD_4095
RPAL316056 RPC_3296RPC_0606RPC_1411RPC_4277
RPAL316055 RPE_2118RPE_0817RPE_1432RPE_4337
RPAL258594 RPA3520RPA0368RPA4360RPA4433
RMET266264 RMET_1352RMET_1353RMET_1354RMET_1959
RMAS416276 RMA_0243RMA_1333RMA_0677RMA_0063
RLEG216596 RL3296RL3465RL4279
RFER338969 RFER_2315RFER_2314RFER_2564RFER_1919
RFEL315456 RF_1088RF_1341RF_0729
REUT381666 H16_A1433H16_A1434H16_A1435H16_A2249
REUT264198 REUT_A1343REUT_A1344REUT_A1345REUT_A1980
RETL347834 RHE_CH02838RHE_CH03020RHE_CH03753
RDEN375451 RD1_3345RD1_1813RD1_3503RD1_0721
RCON272944 RC0230RC1310RC0672RC0059
RCAN293613 A1E_00915A1E_05425A1E_02885A1E_00165
RBEL391896 A1I_01815A1I_00930A1I_04480A1I_07620
RBEL336407 RBE_1102RBE_1246RBE_0680RBE_1372
RAKA293614 A1C_01315A1C_06555A1C_03610A1C_00065
PTHE370438 PTH_1818PTH_1832PTH_2122
PSYR223283 PSPTO_0826PSPTO_0827PSPTO_0828PSPTO_0829
PSYR205918 PSYR_0725PSYR_0726PSYR_0727PSYR_0728
PSTU379731 PST_3643PST_3642PST_3641PST_3640
PSP56811 PSYCPRWF_1573PSYCPRWF_1572PSYCPRWF_0876
PSP312153 PNUC_0920PNUC_0921PNUC_0922PNUC_0447
PSP296591 BPRO_2616BPRO_2615BPRO_2137BPRO_2201
PPUT76869 PPUTGB1_0668PPUTGB1_0669PPUTGB1_0670PPUTGB1_0671
PPUT351746 PPUT_0662PPUT_0663PPUT_0664PPUT_0665
PPUT160488 PP_0622PP_0623PP_0624PP_0625
PPRO298386 PBPRA3022PBPRA3021PBPRA3020PBPRA3018
PNAP365044 PNAP_1864PNAP_1865PNAP_2806PNAP_2225
PMUL272843 PM1720PM1719PM1718PM1704
PMEN399739 PMEN_0968PMEN_0969PMEN_0970PMEN_3639
PMAR167539 PRO_0219PRO_0528PRO_1082
PLUM243265 PLU1267PLU1268PLU1269PLU1270
PINT246198 PIN_A1624PIN_A0401PIN_A1101
PING357804 PING_3266PING_3265PING_3264PING_3263
PHAL326442 PSHAA0932PSHAA0933PSHAA0934PSHAA0935
PFLU220664 PFL_5307PFL_5306PFL_5305PFL_5304
PFLU216595 PFLU0779PFLU0780PFLU0781PFLU0782
PFLU205922 PFL_4837PFL_4836PFL_4835PFL_4834
PENT384676 PSEEN4681PSEEN4680PSEEN4679PSEEN4678
PCRY335284 PCRYO_1126PCRYO_1127PCRYO_1128PCRYO_0841
PCAR338963 PCAR_2383PCAR_2950PCAR_2951PCAR_0359
PATL342610 PATL_1334PATL_1335PATL_1336PATL_1337
PARC259536 PSYC_1258PSYC_1257PSYC_1256PSYC_0823
PAER208964 PA4545PA4544PA4543PA4542
PAER208963 PA14_60230PA14_60210PA14_60200PA14_60190
OCAR504832 OCAR_5252OCAR_7148OCAR_7195OCAR_4780
OANT439375 OANT_1752OANT_1637OANT_1039
NWIN323098 NWI_1060NWI_2502NWI_0589
NOCE323261 NOC_0716NOC_2550NOC_0579NOC_2381
NMUL323848 NMUL_A1975NMUL_A1976NMUL_A1977NMUL_A1541
NMEN374833 NMCC_0662NMCC_0661NMCC_0665NMCC_1384
NMEN272831 NMC0653NMC0654NMC0656NMC1409
NMEN122587 NMA0907NMA0908NMA0911NMA1683
NMEN122586 NMB_0703NMB_0704NMB_0706NMB_1472
NHAM323097 NHAM_1288NHAM_3093NHAM_0681
NGON242231 NGO0277NGO0278NGO0281NGO1046
NEUT335283 NEUT_1229NEUT_1230NEUT_0462NEUT_0734
NEUR228410 NE0506NE0505NE1654NE2402
NARO279238 SARO_1732SARO_3046SARO_3271SARO_2824
MXAN246197 MXAN_1998MXAN_3352MXAN_2999
MSUC221988 MS1820MS1821MS1822MS1783
MSP409 M446_6695M446_3291M446_5085
MSP400668 MMWYL1_3612MMWYL1_3611MMWYL1_3610MMWYL1_3609
MSP266779 MESO_1999MESO_2152MESO_2996
MPET420662 MPE_A2004MPE_A2003MPE_A1871MPE_A1549
MMAR394221 MMAR10_2068MMAR10_2304MMAR10_0650
MMAG342108 AMB3856AMB3186AMB0593AMB1560
MLOT266835 MLL1543MLR2681MLL3429
MFLA265072 MFLA_1613MFLA_1612MFLA_1611MFLA_2198
MEXT419610 MEXT_2951MEXT_2883MEXT_2346
MCAP243233 MCA_0971MCA_0972MCA_0973MCA_3106
MAQU351348 MAQU_0877MAQU_0878MAQU_0879MAQU_0880
LPNE400673 LPC_0653LPC_0749LPC_0748LPC_1190
LPNE297246 LPP1188LPP1287LPP1286LPP1714
LPNE297245 LPL1194LPL1286LPL1285LPL1714
LPNE272624 LPG1186LPG1333LPG1332LPG1750
LINT363253 LI0365LI0769LI0126
LCHO395495 LCHO_2876LCHO_2875LCHO_2089LCHO_2019
KPNE272620 GKPORF_B2250GKPORF_B2249GKPORF_B2248GKPORF_B2247
JSP375286 MMA_1392MMA_1393MMA_1394MMA_1318
JSP290400 JANN_2748JANN_3401JANN_3335JANN_3987
ILOI283942 IL1184IL1183IL1182IL1181
HSOM228400 HSM_0636HSM_0637HSM_0638HSM_0067
HSOM205914 HS_0366HS_0367HS_0368HS_0199
HNEP81032 HNE_0387HNE_0363HNE_0631
HMOD498761 HM1_2104HM1_2077HM1_1340
HINF71421 HI_0177HI_0176HI_0175HI_0859
HINF374930 CGSHIEE_02415CGSHIEE_02410CGSHIEE_02405CGSHIEE_07745
HINF281310 NTHI0266NTHI0264NTHI0263NTHI1028
HHAL349124 HHAL_2236HHAL_2235HHAL_2234HHAL_2232
HDUC233412 HD_0470HD_0469HD_1216HD_0565
HCHE349521 HCH_05922HCH_05920HCH_05919HCH_05918
HAUR316274 HAUR_2903HAUR_1551HAUR_4974
HARS204773 HEAR1927HEAR1926HEAR1925HEAR2144
GVIO251221 GLR0073GLL3765GLL3577
GURA351605 GURA_4007GURA_0881GURA_0882GURA_3955
GTHE420246 GTNG_1003GTNG_0995GTNG_0678
GSUL243231 GSU_0082GSU_0083GSU_0658
GOXY290633 GOX0166GOX0505GOX1136GOX1463
GMET269799 GMET_3014GMET_3435GMET_3434GMET_2851
GKAU235909 GK1146GK1130GK0799
GBET391165 GBCGDNIH1_0421GBCGDNIH1_0849GBCGDNIH1_2312GBCGDNIH1_1803
FTUL458234 FTA_0739FTA_0738FTA_0927FTA_0103
FTUL418136 FTW_0700FTW_0699FTW_1120FTW_0017
FTUL401614 FTN_1263FTN_1264FTN_1075FTN_1743
FTUL393115 FTF1244CFTF1245FTF0608FTF1769C
FTUL393011 FTH_0702FTH_0701FTH_0862FTH_0089
FTUL351581 FTL_0700FTL_0699FTL_0876FTL_0094
FRANT YFIORLUDFT.0609CLPB
FPHI484022 FPHI_1421FPHI_1420FPHI_0033FPHI_0865
ESP42895 ENT638_3075ENT638_3074ENT638_3073ENT638_3072
ELIT314225 ELI_07230ELI_01180ELI_13630ELI_01435
EFER585054 EFER_0472EFER_0473EFER_0474EFER_0475
ECOO157 Z3889SFHBYFIHCLPB
ECOL83334 ECS3458ECS3457ECS3456ECS3455
ECOL585397 ECED1_3036ECED1_3035ECED1_3034ECED1_3033
ECOL585057 ECIAI39_2800ECIAI39_2799ECIAI39_2798ECIAI39_2797
ECOL585056 ECUMN_2922ECUMN_2921ECUMN_2920ECUMN_2919
ECOL585055 EC55989_2886EC55989_2885EC55989_2884EC55989_2883
ECOL585035 ECS88_2783ECS88_2782ECS88_2781ECS88_2780
ECOL585034 ECIAI1_2718ECIAI1_2717ECIAI1_2716ECIAI1_2715
ECOL481805 ECOLC_1086ECOLC_1087ECOLC_1088ECOLC_1089
ECOL469008 ECBD_1089ECBD_1090ECBD_1091ECBD_1092
ECOL439855 ECSMS35_2749ECSMS35_2748ECSMS35_2747ECSMS35_2746
ECOL413997 ECB_02485ECB_02484ECB_02483ECB_02482
ECOL409438 ECSE_2881ECSE_2880ECSE_2879ECSE_2878
ECOL405955 APECO1_3935APECO1_3936APECO1_3937APECO1_3938
ECOL364106 UTI89_C2928UTI89_C2927UTI89_C2926UTI89_C2925
ECOL362663 ECP_2598ECP_2597ECP_2596ECP_2595
ECOL331111 ECE24377A_2881ECE24377A_2880ECE24377A_2879ECE24377A_2878
ECOL316407 ECK2593:JW2577:B2595ECK2592:JW2576:B2594ECK2591:JW2575:B2593ECK2590:JW2573:B2592
ECOL199310 C3117C3116C3115C3114
ECAR218491 ECA3348ECA3347ECA3346ECA3345
DVUL882 DVU_1837DVU_0365DVU_1874
DSHI398580 DSHI_2414DSHI_2610DSHI_2651DSHI_0617
DPSY177439 DP0808DP2730DP0599DP1910
DOLE96561 DOLE_2055DOLE_2169DOLE_2696
DNOD246195 DNO_1310DNO_1311DNO_0942DNO_0108
DHAF138119 DSY2865DSY2892DSY1668
DGEO319795 DGEO_0604DGEO_0261DGEO_1210
DDES207559 DDE_2065DDE_1447DDE_3616DDE_1661
DARO159087 DARO_1603DARO_1604DARO_1605DARO_2727
CVIO243365 CV_2193CV_2192CV_2191CV_1944
CVES412965 COSY_0470COSY_0312COSY_0716
CSP78 CAUL_3100CAUL_0672CAUL_0991
CSP501479 CSE45_2529CSE45_3827CSE45_0453
CSAL290398 CSAL_0496CSAL_0497CSAL_0498CSAL_0499
CRUT413404 RMAG_0512RMAG_0329RMAG_0787
CPSY167879 CPS_3916CPS_3915CPS_3914CPS_3913
CPHY357809 CPHY_2356CPHY_2397CPHY_3819
CKLU431943 CKL_1199CKL_1345CKL_2702
CJAP155077 CJA_3206CJA_3205CJA_3204CJA_3194
CDIF272563 CD2596CD2639CD2020
CDES477974 DAUD_0949DAUD_1420DAUD_0452
CBUR434922 COXBU7E912_0772COXBU7E912_0771COXBU7E912_0770COXBU7E912_2015
CBUR360115 COXBURSA331_A1193COXBURSA331_A1194COXBURSA331_A1195COXBURSA331_A0179
CBUR227377 CBU_0758CBU_0757CBU_0756CBU_0094
CBOT536232 CLM_1713CLM_2833CLM_0480
CBOT515621 CLJ_B1578CLJ_B2759CLJ_B0468
CBOT508765 CLL_A2432CLL_A1194CLL_A0752
CBOT498213 CLD_3074CLD_2107CLD_0341
CBOT441772 CLI_1560CLI_2591CLI_0484
CBOT441771 CLC_1513CLC_2387CLC_0449
CBOT441770 CLB_1501CLB_2405CLB_0434
CBOT36826 CBO1476CBO2528CBO0409
CBLO291272 BPEN_186BPEN_187BPEN_188
CBLO203907 BFL180BFL181BFL182
CBEI290402 CBEI_1595CBEI_1124CBEI_0645
CAULO CC1984CC0453CC0490CC0878
BWEI315730 BCERKBAB4_3719BCERKBAB4_3728BCERKBAB4_1077
BVIE269482 BCEP1808_1721BCEP1808_1720BCEP1808_1719BCEP1808_1774
BTRI382640 BT_1583BT_0731BT_1998
BTHU412694 BALH_3523BALH_3531BALH_1032
BTHU281309 BT9727_3634BT9727_3643BT9727_1072
BTHE226186 BT_3712BT_4389BT_4597
BTHA271848 BTH_I2252BTH_I2253BTH_I2254BTH_I2205
BSUI470137 BSUIS_A1473BSUIS_A1589BSUIS_A1705
BSUI204722 BR_1422BR_1530BR_1864
BSP376 BRADO5651BRADO6002BRADO6450
BSP36773 BCEP18194_A5095BCEP18194_A5094BCEP18194_A5093BCEP18194_A5148
BQUI283165 BQ08780BQ03320BQ11170
BPSE320373 BURPS668_2169BURPS668_2168BURPS668_2167BURPS668_2223
BPSE320372 BURPS1710B_A2535BURPS1710B_A2534BURPS1710B_A2533BURPS1710B_A2589
BPSE272560 BPSL1531BPSL1532BPSL1533BPSL1484
BPET94624 BPET1846BPET1847BPET1848BPET3174
BPER257313 BP1146BP1147BP1148BP1198
BPAR257311 BPP3199BPP3198BPP3197BPP1814
BOVI236 GBOORF1437GBOORF1542GBOORF1865
BMEL359391 BAB1_1441BAB1_1546BAB1_1868
BMEL224914 BMEI0587BMEI0486BMEI0195
BMAL320389 BMA10247_1085BMA10247_1084BMA10247_1083BMA10247_1138
BMAL320388 BMASAVP1_A1814BMASAVP1_A1813BMASAVP1_A1812BMASAVP1_A1867
BMAL243160 BMA_1325BMA_1324BMA_1323BMA_1377
BJAP224911 BLL6594BLR7336BLR7446BLR1404
BHEN283166 BH11160BH11820BH14110
BFRA295405 BF0489BF1122BF1205
BFRA272559 BF0434BF1034BF1172
BCIC186490 BCI_0192BCI_0193BCI_0194
BCER572264 BCA_3996BCA_4005BCA_1212
BCER405917 BCE_3937BCE_3946BCE_1287
BCER315749 BCER98_2541BCER98_2550BCER98_0885
BCER288681 BCE33L3651BCE33L3660BCE33L1066
BCER226900 BC_3892BC_3901BC_1168
BCEN331272 BCEN2424_1794BCEN2424_1793BCEN2424_1792BCEN2424_1847
BCEN331271 BCEN_6285BCEN_6286BCEN_6287BCEN_6232
BCAN483179 BCAN_A1455BCAN_A1567BCAN_A1908
BBRO257310 BB3599BB3598BB3597BB3293
BBAC360095 BARBAKC583_0939BARBAKC583_0996BARBAKC583_0216
BBAC264462 BD0125BD3792BD3048
BANT592021 BAA_4057BAA_4066BAA_1256
BANT568206 BAMEG_0597BAMEG_0587BAMEG_3408
BANT261594 GBAA4031GBAA4040GBAA1177
BANT260799 BAS3743BAS3752BAS1090
BAMB398577 BAMMC406_1705BAMMC406_1704BAMMC406_1703BAMMC406_1757
BAMB339670 BAMB_1732BAMB_1731BAMB_1730BAMB_1785
BABO262698 BRUAB1_1417BRUAB1_1519BRUAB1_1843
ASP76114 EBA4724EBA4725EBA4726EBA6667
ASP62977 ACIAD2898ACIAD2897ACIAD2896ACIAD1265
ASP62928 AZO1017AZO1018AZO1019AZO1566
ASP232721 AJS_1829AJS_1163AJS_2076AJS_3198
ASAL382245 ASA_0243ASA_0244ASA_0245ASA_0246
APLE434271 APJL_1140APJL_1141APJL_0456APJL_1103
APLE416269 APL_1121APL_1122APL_0431APL_1087
AHYD196024 AHA_4074AHA_4073AHA_4072AHA_4071
AFER243159 AFE_2607AFE_2606AFE_2605AFE_1122
AEHR187272 MLG_2551MLG_2552MLG_2557MLG_2558
ADEH290397 ADEH_3366ADEH_1901ADEH_2703ADEH_0385
ACRY349163 ACRY_0755ACRY_2719ACRY_0423ACRY_1823
ACAU438753 AZC_4567AZC_4254AZC_3984AZC_4200
ABOR393595 ABO_0475ABO_0476ABO_0477ABO_0479
ABAU360910 BAV1218BAV1219BAV1220BAV2424
ABAC204669 ACID345_0073ACID345_3345ACID345_4103ACID345_4765
AAVE397945 AAVE_3241AAVE_1417AAVE_2475AAVE_1249


Organism features enriched in list (features available for 295 out of the 317 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00154783492
Arrangment:Clusters 0.0000896117
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0045226111
Endospores:No 5.308e-2548211
GC_Content_Range4:0-40 5.229e-1563213
GC_Content_Range4:40-60 0.0000748135224
GC_Content_Range4:60-100 2.430e-697145
GC_Content_Range7:0-30 0.00052371347
GC_Content_Range7:30-40 1.897e-1050166
GC_Content_Range7:50-60 8.567e-1082107
GC_Content_Range7:60-70 1.158e-896134
GC_Content_Range7:70-100 0.0045226111
Genome_Size_Range5:0-2 4.975e-1932155
Genome_Size_Range5:2-4 0.000578882197
Genome_Size_Range5:4-6 1.487e-24149184
Genome_Size_Range5:6-10 0.00529183247
Genome_Size_Range9:0-1 0.0000115327
Genome_Size_Range9:1-2 2.359e-1329128
Genome_Size_Range9:2-3 1.428e-638120
Genome_Size_Range9:4-5 4.809e-97496
Genome_Size_Range9:5-6 2.067e-137588
Genome_Size_Range9:6-8 0.00054792938
Gram_Stain:Gram_Neg 2.173e-39245333
Gram_Stain:Gram_Pos 2.139e-2226150
Habitat:Multiple 0.0003924108178
Habitat:Specialized 0.00086121653
Motility:No 1.455e-1831151
Motility:Yes 1.477e-11175267
Optimal_temp.:- 0.0002600150257
Optimal_temp.:25-30 1.780e-61919
Optimal_temp.:30-37 0.0000456118
Optimal_temp.:35-37 0.00012471313
Oxygen_Req:Aerobic 0.0005883111185
Oxygen_Req:Anaerobic 0.000021533102
Pathogenic_in:Animal 0.00833814266
Pathogenic_in:No 0.0034630100226
Salinity:Non-halophilic 0.003788742106
Shape:Coccobacillus 0.00050691111
Shape:Coccus 3.791e-101682
Shape:Rod 3.386e-25236347
Shape:Sphere 0.0002253219
Shape:Spiral 7.262e-6534
Temp._range:Mesophilic 0.0012876253473
Temp._range:Psychrophilic 0.002045699
Temp._range:Thermophilic 0.0001030735



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 178
Effective number of orgs (counting one per cluster within 468 clusters): 143

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis1
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SCO ncbi Streptomyces coelicolor A3(2)1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SARE391037 ncbi Salinispora arenicola CNS-2051
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.0
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSP35761 Nocardioides sp.1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FMAG334413 ncbi Finegoldia magna ATCC 293280
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-401
CCUR360105 ncbi Campylobacter curvus 525.921
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR329726 ncbi Acaryochloris marina MBIC110171
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  G7352   EG12098   EG12097   EG10157   
WSUC273121 WS0972
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_0473
TPET390874 TPET_0458
TPEN368408
TPAL243276
TMAR243274 TM_0462
TLET416591 TLET_1015
TKOD69014
TDEN326298 TMDEN_0476
TDEN243275 TDE_2327
TACI273075
STRO369723 STROP_0121
STOK273063
STHE322159 STER_0554
STHE299768 STR0522
STHE264199 STU0522
SSUI391296
SSUI391295 SSU05_0786
SSP387093 SUN_1371
SSOL273057
SPYO370554 MGAS10750_SPY0727
SPYO370553
SPYO370552 MGAS10270_SPY0694
SPYO370551 MGAS9429_SPY0693
SPYO319701 M28_SPY0618
SPYO293653 M5005_SPY0638
SPYO286636 M6_SPY0656
SPYO198466 SPYM3_0557
SPYO193567 SPS1297
SPYO186103 SPYM18_0889
SPYO160490 SPY0827
SPNE488221 SP70585_0968
SPNE487214 SPH_1038
SPNE487213 SPT_1270
SPNE171101 SPR0830
SPNE170187 SPN06100
SPNE1313 SPJ_0869
SMUT210007 SMU_854
SMAR399550
SGOR29390 SGO_1090
SEPI176279 SERP0763
SCO SCO2081
SAUR93061 SAOUHSC_01163
SAUR426430 NWMN_1108
SAUR367830 SAUSA300_1090
SAUR282459 SAS1131
SAUR196620 MW1080
SARE391037 SARE_0120
SAGA211110 GBS1435
SAGA208435 SAG_1365
SAGA205921 SAK_1398
SACI330779
RSAL288705 RSAL33209_1871
PTOR263820
PSP117
PPEN278197 PEPE_0941
PMOB403833
PMAR93060
PMAR74546
PMAR59920 PMN2A_0016
PMAR167555 NATL1_06361
PMAR167546
PMAR167542
PMAR167540
PMAR146891
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244 OTBS_1576
NSP387092 NIS_0069
NSP35761 NOCA_4357
NPHA348780
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_1289
MGEN243273
MFLO265311 MFL387
MCAP340047
MBUR259564 MBUR_2199
MBAR269797
MART243272
MAEO419665
MACE188937
LXYL281090
LSAK314315 LSA0949
LREU557436 LREU_0929
LMES203120 LEUM_1373
LJOH257314 LJ_1186
LHEL405566 LHV_1258
LGAS324831 LGAS_1014
LDEL390333 LDB1022
LDEL321956 LBUL_0930
LCAS321967 LSEI_1458
LBRE387344 LVIS_0832
LBIF456481
LBIF355278
LACI272621 LBA1151
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279 HH_0214
HBUT415426
HACI382638
FSUC59374 FSU0389
FNUC190304
FMAG334413
DSP255470
DSP216389
DETH243164 DET_1375
CTRA471473
CTRA471472
CSUL444179
CMUR243161
CMIC443906
CMIC31964
CMET456442 MBOO_1604
CMAQ397948
CKOR374847
CJEJ407148 C8J_1160
CJEJ360109 JJD26997_0513
CJEJ354242 CJJ81176_1230
CJEJ195099 CJE_1352
CJEJ192222 CJ1217C
CHOM360107
CFET360106 CFF8240_1444
CCUR360105 CCV52592_1906
BXEN266265
BTUR314724
BHER314723
BGAR290434
BBUR224326
BAPH372461
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
ANAE240017 ANA_1096
AMAR329726 AM1_2125
ALAI441768 ACL_0817
AFUL224325
ABUT367737 ABU_1075


Organism features enriched in list (features available for 166 out of the 178 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00032754092
Arrangment:Pairs 0.003373321112
Disease:Wide_range_of_infections 7.817e-71111
Endospores:No 2.625e-25115211
Endospores:Yes 0.0000151353
GC_Content_Range4:0-40 5.102e-15102213
GC_Content_Range4:40-60 0.001477049224
GC_Content_Range4:60-100 4.274e-1014145
GC_Content_Range7:0-30 0.00101712347
GC_Content_Range7:30-40 1.977e-1079166
GC_Content_Range7:50-60 2.021e-612107
GC_Content_Range7:60-70 1.151e-1011134
Genome_Size_Range5:0-2 1.982e-33104155
Genome_Size_Range5:4-6 1.528e-246184
Genome_Size_Range5:6-10 0.0000929347
Genome_Size_Range9:0-1 6.571e-82127
Genome_Size_Range9:1-2 4.499e-2383128
Genome_Size_Range9:3-4 0.00036291077
Genome_Size_Range9:4-5 5.597e-12396
Genome_Size_Range9:5-6 1.080e-10388
Gram_Stain:Gram_Neg 4.372e-1356333
Habitat:Multiple 0.001799637178
Habitat:Specialized 0.00045932653
Habitat:Terrestrial 0.0002940131
Motility:No 2.148e-972151
Motility:Yes 0.000523359267
Optimal_temp.:- 0.003768260257
Optimal_temp.:30-35 0.002524867
Optimal_temp.:85 0.006403744
Oxygen_Req:Aerobic 7.677e-729185
Oxygen_Req:Anaerobic 5.267e-648102
Oxygen_Req:Microaerophilic 0.00268521118
Pathogenic_in:Animal 0.0001660766
Pathogenic_in:Swine 0.001791755
Shape:Coccus 3.549e-84582
Shape:Irregular_coccus 2.881e-101717
Shape:Rod 3.008e-3038347
Shape:Sphere 2.672e-81719
Shape:Spiral 1.545e-72434
Temp._range:Hyperthermophilic 3.719e-92023
Temp._range:Mesophilic 0.0044072124473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002620.7027
GLYCOCAT-PWY (glycogen degradation I)2462270.6688
PWY-1269 (CMP-KDO biosynthesis I)3252690.6661
PWY-5918 (heme biosynthesis I)2722410.6642
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912490.6495
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862450.6409
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482760.6397
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962500.6390
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2252080.6251
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902430.6143
PWY-5913 (TCA cycle variation IV)3012470.6030
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951840.5870
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181980.5862
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831750.5772
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162950.5680
TYRFUMCAT-PWY (tyrosine degradation I)1841720.5516
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491480.5433
PWY-4041 (γ-glutamyl cycle)2792260.5426
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911750.5419
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911750.5419
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552110.5305
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982790.5113
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222880.5033
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392500.4997
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292450.4991
PWY-5028 (histidine degradation II)1301290.4966
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761590.4953
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262420.4894
PWY0-501 (lipoate biosynthesis and incorporation I)3852690.4831
REDCITCYC (TCA cycle variation II)1741540.4685
DAPLYSINESYN-PWY (lysine biosynthesis I)3422450.4580
KDOSYN-PWY (KDO transfer to lipid IVA I)1801560.4563
AST-PWY (arginine degradation II (AST pathway))1201170.4555
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791550.4535
PWY-5340 (sulfate activation for sulfonation)3852640.4500
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561390.4419
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002210.4392
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892140.4310
PWY-5386 (methylglyoxal degradation I)3052220.4291
PWY0-862 (cis-dodecenoyl biosynthesis)3432410.4291
PWY-5188 (tetrapyrrole biosynthesis I)4392840.4267
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652510.4255
PWY1-3 (polyhydroxybutyrate biosynthesis)1151090.4178
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96950.4104
PWY0-1264 (biotin-carboxyl carrier protein assembly)5143100.4096
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491890.4084
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491890.4084
PWY-5966 (fatty acid biosynthesis initiation II)4913010.4020
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121050.4014



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12098   EG12097   EG10157   
G73520.9998520.9997250.999335
EG120980.9998370.99935
EG120970.999334
EG10157



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PAIRWISE BLAST SCORES:

  G7352   EG12098   EG12097   EG10157   
G73520.0f0---
EG12098-0.0f0--
EG12097--0.0f0-
EG10157---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10157 EG12097 EG12098 G7352 (centered at EG12098)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7352   EG12098   EG12097   EG10157   
287/623412/623413/623406/623
AAEO224324:0:Tyes-11220-
AAUR290340:2:Tyes--0156
AAVE397945:0:Tyes196316812100
ABAC204669:0:Tyes0329740654738
ABAU360910:0:Tyes0121216
ABOR393595:0:Tyes0124
ABUT367737:0:Tyes--0-
ACAU438753:0:Tyes6012780224
ACEL351607:0:Tyes--01105
ACRY349163:8:Tyes332230501405
ADEH290397:0:Tyes3012153323430
AEHR187272:0:Tyes0167
AFER243159:0:Tyes1464146314620
AHYD196024:0:Tyes3210
ALAI441768:0:Tyes-0--
AMAR234826:0:Tyes41--0
AMAR329726:9:Tyes---0
AMET293826:0:Tyes-073-
ANAE240017:0:Tyes--0-
AORE350688:0:Tyes-260-
APHA212042:0:Tyes805--0
APLE416269:0:Tyes6866870654
APLE434271:0:Tno6676680630
ASAL382245:5:Tyes0123
ASP1667:3:Tyes--02176
ASP232721:2:Tyes63708741959
ASP62928:0:Tyes012567
ASP62977:0:Tyes1506150515040
ASP76114:2:Tyes0121158
AVAR240292:3:Tyes-2797-0
BABO262698:1:Tno0-101422
BAMB339670:3:Tno21056
BAMB398577:3:Tno21054
BAMY326423:0:Tyes-90-
BANT260799:0:Tno-263226410
BANT261594:2:Tno--26120
BANT568206:2:Tyes-1002793
BANT592021:2:Tno-277227810
BAPH198804:0:Tyes10--
BBAC264462:0:Tyes0-33862707
BBAC360095:0:Tyes670-7240
BBRO257310:0:Tyes3143133120
BCAN483179:1:Tno0-107433
BCEN331271:0:Tno5354550
BCEN331272:3:Tyes21055
BCER226900:1:Tyes-266126700
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ZMOB264203:0:Tyes103701002693



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