CANDIDATE ID: 1113

CANDIDATE ID: 1113

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9916900e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11203 (yihA) (b3865)
   Products of gene:
     - EG11203-MONOMER (cell division protein; predicted checkpoint GTPase)

- EG11197 (yidC) (b3705)
   Products of gene:
     - YIDC (inner-membrane protein insertion factor)
     - SECD-SECF-YAJC-YIDC-CPLX (SecD-SecF-YajC-YidC Secretion Complex)
     - SEC-SECRETION-CPLX (Sec Protein Secretion Complex)

- EG10064 (argB) (b3959)
   Products of gene:
     - ACETYLGLUTKIN-MONOMER (acetylglutamate kinase monomer)
     - ACETYLGLUTKIN-CPLX (acetylglutamate kinase)
       Reactions:
        N-acetyl-L-glutamate + ATP  ->  N-acetylglutamyl-phosphate + ADP + H+
         In pathways
         ARG+POLYAMINE-SYN (superpathway of arginine and polyamine biosynthesis)
         ARGSYN-PWY (arginine biosynthesis I)
         GLUTORN-PWY (ornithine biosynthesis)
         ARGSYNBSUB-PWY (ARGSYNBSUB-PWY)
         PWY-5154 (PWY-5154)

- EG10063 (argA) (b2818)
   Products of gene:
     - N-ACETYLTRANSFER-MONOMER (ArgA)
     - N-ACETYLTRANSFER-CPLX (N-acetylglutamate synthase)
       Reactions:
        L-glutamate + acetyl-CoA  =  N-acetyl-L-glutamate + coenzyme A + H+
         In pathways
         ARG+POLYAMINE-SYN (superpathway of arginine and polyamine biosynthesis)
         ARGSYN-PWY (arginine biosynthesis I)
         GLUTORN-PWY (ornithine biosynthesis)
         ARGSYNBSUB-PWY (ARGSYNBSUB-PWY)
         PWY-5154 (PWY-5154)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 317
Effective number of orgs (counting one per cluster within 468 clusters): 242

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XAUT78245 ncbi Xanthobacter autotrophicus Py24
WSUC273121 ncbi Wolinella succinogenes DSM 17403
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP28240 Thermotoga sp.3
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TPET390874 ncbi Thermotoga petrophila RKU-13
TMAR243274 ncbi Thermotoga maritima MSB83
TLET416591 ncbi Thermotoga lettingae TMO3
TFUS269800 ncbi Thermobifida fusca YX3
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12513
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B4
SSP387093 ncbi Sulfurovum sp. NBC37-14
SSP292414 ncbi Ruegeria sp. TM10404
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans3
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
RALB246199 Ruminococcus albus 83
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PSP117 Pirellula sp.3
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMOB403833 ncbi Petrotoga mobilis SJ953
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUT319225 ncbi Chlorobium luteolum DSM 2734
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1253
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PDIS435591 ncbi Parabacteroides distasonis ATCC 85033
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OIHE221109 ncbi Oceanobacillus iheyensis HTE8313
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP387092 ncbi Nitratiruptor sp. SB155-24
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16223
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53343
LMON265669 ncbi Listeria monocytogenes 4b F23653
LMON169963 ncbi Listeria monocytogenes EGD-e3
LLAC272623 ncbi Lactococcus lactis lactis Il14033
LLAC272622 ncbi Lactococcus lactis cremoris SK113
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-003
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1303
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566013
LINN272626 ncbi Listeria innocua Clip112623
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1973
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5503
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)3
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)3
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR3
HNEP81032 Hyphomonas neptunium3
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HHEP235279 ncbi Helicobacter hepaticus ATCC 514493
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-23
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4263
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S854
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
ESP42895 Enterobacter sp.4
ERUM302409 ncbi Ehrlichia ruminantium Gardel3
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden3
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas3
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
ECAN269484 ncbi Ehrlichia canis Jake3
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-14
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPHY357809 ncbi Clostridium phytofermentans ISDg3
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10623
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJEJ407148 ncbi Campylobacter jejuni jejuni 811163
CJEJ360109 ncbi Campylobacter jejuni doylei 269.973
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1763
CJEJ195099 ncbi Campylobacter jejuni RM12213
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111683
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334063
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3813
CFET360106 ncbi Campylobacter fetus fetus 82-404
CDIF272563 ncbi Clostridium difficile 6304
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C3
CCUR360105 ncbi Campylobacter curvus 525.923
CCHL340177 ncbi Chlorobium chlorochromatii CaD34
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHU412694 ncbi Bacillus thuringiensis Al Hakam3
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-273
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1683
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)4
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0323
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145803
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1253
BFRA295405 ncbi Bacteroides fragilis YCH463
BFRA272559 ncbi Bacteroides fragilis NCTC 93433
BCLA66692 ncbi Bacillus clausii KSM-K163
BCER572264 ncbi Bacillus cereus 03BB1023
BCER405917 Bacillus cereus W3
BCER315749 ncbi Bacillus cytotoxicus NVH 391-983
BCER288681 ncbi Bacillus cereus E33L3
BCER226900 ncbi Bacillus cereus ATCC 145793
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5834
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)3
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)4
BANT592021 ncbi Bacillus anthracis A02483
BANT568206 ncbi Bacillus anthracis CDC 6843
BANT261594 ncbi Bacillus anthracis Ames Ancestor3
BANT260799 ncbi Bacillus anthracis Sterne3
BAMY326423 ncbi Bacillus amyloliquefaciens FZB423
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABUT367737 ncbi Arcobacter butzleri RM40184
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  EG11203   EG11197   EG10064   EG10063   
ZMOB264203 ZMO1627ZMO1626ZMO1494ZMO1494
YPSE349747 YPSIP31758_0022YPSIP31758_4157YPSIP31758_0128YPSIP31758_0993
YPSE273123 YPTB0019YPTB3948YPTB0111YPTB3023
YPES386656 YPDSF_3885YPDSF_3932YPDSF_3536YPDSF_1693
YPES377628 YPN_0246YPN_3959YPN_0043YPN_2979
YPES360102 YPA_3523YPA_4147YPA_0098YPA_0494
YPES349746 YPANGOLA_A0024YPANGOLA_A4182YPANGOLA_A3897YPANGOLA_A3229
YPES214092 YPO0019YPO4102YPO3925YPO1022
YPES187410 Y3809Y4117Y0311Y3162
YENT393305 YE0022YE4177YE0120YE3308
XCAM487884 XCC-B100_0800XCC-B100_4466XCC-B100_1934
XCAM316273 XCAORF_3735XCAORF_4596XCAORF_2514
XAUT78245 XAUT_0361XAUT_1921XAUT_0013XAUT_0013
WSUC273121 WS1286WS2140WS2140
VVUL216895 VV1_0900VV1_1007VV1_1372VV1_1799
VVUL196600 VV0187VV0003VV3001VV2611
VPAR223926 VP0109VP0003VP2758VP2371
VFIS312309 VF0075VF0003VF2305VF0585
VEIS391735 VEIS_4840VEIS_5012VEIS_1226VEIS_0871
VCHO345073 VC0395_A2407VC0395_A2514VC0395_A2219VC0395_A1901
VCHO VC0111VC0004VC2643VC2316
TTUR377629 TERTU_4644TERTU_4739TERTU_0187TERTU_0377
TTEN273068 TTE0628TTE2799TTE2496TTE2496
TSP28240 TRQ2_1359TRQ2_1041TRQ2_1041
TSP1755 TETH514_2298TETH514_2411TETH514_0659TETH514_0659
TPSE340099 TETH39_1648TETH39_2292TETH39_0225TETH39_0225
TPET390874 TPET_1327TPET_1071TPET_1071
TMAR243274 TM_1466TM_1784TM_1784
TLET416591 TLET_0795TLET_0367TLET_0367
TFUS269800 TFU_3114TFU_2055TFU_2055
TDEN326298 TMDEN_0524TMDEN_0854TMDEN_0854
TDEN292415 TBD_0188TBD_2825TBD_2686TBD_0154
TCRU317025 TCR_0047TCR_2197TCR_1899TCR_0598
SWOL335541 SWOL_1652SWOL_2289SWOL_2289
STYP99287 STM4001STM3842STM4122STM2992
STHE292459 STH362STH3338STH2882STH2882
SSP94122 SHEWANA3_4110SHEWANA3_0006SHEWANA3_3904SHEWANA3_3767
SSP644076 SCH4B_1091SCH4B_1093SCH4B_1087SCH4B_1087
SSP387093 SUN_1223SUN_1571SUN_1628SUN_1628
SSP292414 TM1040_0305TM1040_0307TM1040_0301TM1040_0301
SSON300269 SSO_4037SSO_3656SSO_4132SSO_2975
SSED425104 SSED_0095SSED_0002SSED_4275SSED_0388
SPRO399741 SPRO_4886SPRO_0028SPRO_4780SPRO_3812
SPEA398579 SPEA_0101SPEA_4257SPEA_0228SPEA_3834
SONE211586 SO_4667SO_0004SO_0276SO_4245
SMEL266834 SMC01722SMC01721SMC01726SMC01726
SMED366394 SMED_0078SMED_0079SMED_0075SMED_0075
SLOI323850 SHEW_3715SHEW_3866SHEW_0203SHEW_3478
SLAC55218 SL1157_1618SL1157_1620SL1157_1615SL1157_1615
SHIGELLA YIHAYIDCARGBARGA
SHAL458817 SHAL_4221SHAL_4311SHAL_4092SHAL_0432
SGLO343509 SG2234SG2429SG2160
SFUM335543 SFUM_4052SFUM_2597SFUM_0064SFUM_0064
SFLE373384 SFV_3636SFV_3807SFV_4028SFV_2896
SFLE198214 AAN45370.1AAN45202.1AAN45466.1AAN44316.1
SENT454169 SEHA_C4329SEHA_C4176SEHA_C4450SEHA_C3204
SENT321314 SCH_3893SCH_3759SCH_4012SCH_2930
SENT295319 SPA3842SPA3686SPA3960SPA2857
SENT220341 STY3880STY3938STY3751STY3130
SENT209261 T3620T3678T3502T2900
SDYS300267 SDY_3878SDY_4188SDY_3794SDY_3035
SDEN318161 SDEN_3621SDEN_3775SDEN_0251SDEN_0329
SDEG203122 SDE_0075SDE_4014SDE_3675SDE_0360
SBOY300268 SBO_3877SBO_3671SBO_3978SBO_2708
SBAL402882 SHEW185_4346SHEW185_4379SHEW185_4094SHEW185_0379
SBAL399599 SBAL195_4486SBAL195_4521SBAL195_4212SBAL195_0391
SALA317655 SALA_0003SALA_0004SALA_3095SALA_3095
SACI56780 SYN_00589SYN_01014SYN_02154SYN_02154
RSPH349102 RSPH17025_2867RSPH17025_2869RSPH17025_2865RSPH17025_2865
RSPH349101 RSPH17029_2727RSPH17029_2725RSPH17029_2729RSPH17029_2729
RSPH272943 RSP_1066RSP_1064RSP_1068RSP_1068
RSOL267608 RSC2988RSC0004RSC0033RSC1250
RRUB269796 RRU_A3340RRU_A3339RRU_A3341RRU_A3341
RPOM246200 SPO_0530SPO_0532SPO_0526SPO_0526
RPAL316058 RPB_0682RPB_0683RPB_0680RPB_0680
RPAL316057 RPD_0070RPD_0069RPD_0072RPD_0072
RPAL316056 RPC_0816RPC_0817RPC_0814RPC_0814
RPAL316055 RPE_0645RPE_0644RPE_0647RPE_0647
RPAL258594 RPA0631RPA0632RPA0629RPA0629
RMET266264 RMET_3285RMET_3613RMET_0140RMET_2070
RLEG216596 RL0452RL0453RL0445RL0445
RFER338969 RFER_3190RFER_4242RFER_3524RFER_2105
REUT381666 H16_A3452H16_A3744H16_A0208H16_A2343
REUT264198 REUT_A3148REUT_A3460REUT_A0180REUT_A2066
RETL347834 RHE_CH00436RHE_CH00437RHE_CH00428RHE_CH00428
RDEN375451 RD1_1453RD1_1455RD1_1452RD1_1452
RALB246199 GRAORF_1227GRAORF_1967GRAORF_1967
PTHE370438 PTH_0808PTH_2919PTH_0503PTH_0503
PSYR223283 PSPTO_0343PSPTO_5612PSPTO_0082PSPTO_0324
PSYR205918 PSYR_0269PSYR_5134PSYR_0218PSYR_0254
PSTU379731 PST_4061PST_4211PST_0469PST_0275
PSP56811 PSYCPRWF_1891PSYCPRWF_2388PSYCPRWF_1828PSYCPRWF_2250
PSP312153 PNUC_0084PNUC_2085PNUC_2013PNUC_1262
PSP296591 BPRO_0771BPRO_4905BPRO_3982BPRO_2397
PSP117 RB8240RB5983RB5983
PPUT76869 PPUTGB1_0139PPUTGB1_5444PPUTGB1_5339PPUTGB1_5245
PPUT351746 PPUT_0141PPUT_5309PPUT_5198PPUT_5092
PPUT160488 PP_0124PP_0006PP_5289PP_5185
PPRO298386 PBPRA3502PBPRA0003PBPRA0267PBPRA2996
PNAP365044 PNAP_0663PNAP_4113PNAP_3479PNAP_2177
PMUL272843 PM1511PM1165PM1119PM0828
PMOB403833 PMOB_1361PMOB_1697PMOB_1697
PMEN399739 PMEN_0155PMEN_4620PMEN_4380PMEN_0354
PLUT319225 PLUT_0212PLUT_2129PLUT_1047PLUT_1047
PLUM243265 PLU0390PLU4906PLU4743PLU0644
PING357804 PING_0211PING_3611PING_0229PING_0872
PHAL326442 PSHAA2753PSHAA3022PSHAA2290
PFLU220664 PFL_0083PFL_6230PFL_6055PFL_5941
PFLU216595 PFLU0080PFLU6134PFLU5987PFLU5862
PFLU205922 PFL_0055PFL_5743PFL_5543PFL_5419
PENT384676 PSEEN0078PSEEN5556PSEEN5435PSEEN5300
PDIS435591 BDI_1441BDI_0520BDI_0488
PCRY335284 PCRYO_0285PCRYO_2473PCRYO_0568PCRYO_2405
PCAR338963 PCAR_2742PCAR_3143PCAR_2413PCAR_2413
PATL342610 PATL_0014PATL_4312PATL_0981PATL_0977
PARC259536 PSYC_0259PSYC_2144PSYC_0579PSYC_2089
PAER208964 PA5492PA5568PA5323PA5204
PAER208963 PA14_72480PA14_73410PA14_70280PA14_68740
OIHE221109 OB2075OB3494OB1077
OCAR504832 OCAR_7531OCAR_7530OCAR_7533OCAR_7533
OANT439375 OANT_1360OANT_1361OANT_1358OANT_1358
NWIN323098 NWI_3073NWI_3074NWI_3071NWI_3071
NSP387092 NIS_0781NIS_0881NIS_1042NIS_1042
NOCE323261 NOC_0553NOC_3087NOC_2995NOC_2013
NMUL323848 NMUL_A2080NMUL_A2776NMUL_A1116NMUL_A0380
NMEN374833 NMCC_0422NMCC_0313NMCC_0992NMCC_0345
NMEN272831 NMC0415NMC0316NMC1038NMC0343
NMEN122587 NMA0656NMA0548NMA1275NMA0580
NMEN122586 NMB_1806NMB_1907NMB_1074NMB_1876
NHAM323097 NHAM_3702NHAM_3703NHAM_3700NHAM_3700
NGON242231 NGO0100NGO2178NGO0844NGO0027
NEUT335283 NEUT_0234NEUT_2154NEUT_2384NEUT_1048
NEUR228410 NE2458NE0387NE1005NE0778
NARO279238 SARO_0579SARO_0578SARO_3297SARO_3297
MXAN246197 MXAN_3024MXAN_7509MXAN_5105
MTHE264732 MOTH_2521MOTH_2288MOTH_2288
MSUC221988 MS1997MS0481MS0236MS0754
MSP409 M446_5082M446_5081M446_0868M446_0868
MSP400668 MMWYL1_0749MMWYL1_4485MMWYL1_0621MMWYL1_1103
MSP266779 MESO_0378MESO_0376MESO_0380MESO_0380
MPET420662 MPE_A0431MPE_A3825MPE_A0499MPE_A1373
MLOT266835 MLR4815MLR4812MLR4826MLR4826
MFLA265072 MFLA_0232MFLA_2758MFLA_2255MFLA_2252
MEXT419610 MEXT_2350MEXT_2351MEXT_2342MEXT_2342
MCAP243233 MCA_2604MCA_3037MCA_2781MCA_2084
MAQU351348 MAQU_3570MAQU_3895MAQU_3560MAQU_3557
LWEL386043 LWE1571LWE2777LWE1602
LMON265669 LMOF2365_1579LMOF2365_2844LMOF2365_1611
LMON169963 LMO1558LMO2854LMO1589
LLAC272623 L00157L0107L0107
LLAC272622 LACR_1273LACR_0859LACR_0859
LINT363253 LI1070LI0333LI0333
LINT267671 LIC_10157LIC_20090LIC_20090
LINT189518 LA0178LB114LB114
LINN272626 LIN1593LIN2986LIN1631
LCHO395495 LCHO_0393LCHO_4385LCHO_0539LCHO_2228
LBOR355277 LBJ_0147LBJ_4096LBJ_4096
LBOR355276 LBL_2936LBL_4112LBL_4112
LBIF456481 LEPBI_I0292LEPBI_II0170LEPBI_II0170
LBIF355278 LBF_0283LBF_4165LBF_4165
KPNE272620 GKPORF_B3514GKPORF_B3458GKPORF_B3591GKPORF_B2567
JSP375286 MMA_3377MMA_3694MMA_3235MMA_1179
JSP290400 JANN_0634JANN_0637JANN_0633JANN_0633
ILOI283942 IL0027IL2637IL0613
HNEP81032 HNE_0414HNE_0418HNE_0418
HMOD498761 HM1_0475HM1_0910HM1_1430HM1_1430
HHEP235279 HH_0112HH_0179HH_0179
HHAL349124 HHAL_2391HHAL_1230HHAL_2296HHAL_2046
HDUC233412 HD_0342HD_0040HD_0891HD_1384
HCHE349521 HCH_01014HCH_07087HCH_01027HCH_01030
HARS204773 HEAR3135HEAR3469HEAR2988HEAR1078
GURA351605 GURA_4189GURA_4429GURA_0225GURA_0225
GTHE420246 GTNG_2578GTNG_3442GTNG_0672
GSUL243231 GSU_3013GSU_3466GSU_0150GSU_0150
GOXY290633 GOX1828GOX1827GOX1829GOX1829
GMET269799 GMET_0465GMET_3561GMET_0203GMET_0203
GKAU235909 GK2649GK3496GK0792
GBET391165 GBCGDNIH1_0727GBCGDNIH1_0726GBCGDNIH1_0734GBCGDNIH1_0734
FSUC59374 FSU1605FSU2248FSU2745FSU1986
FPHI484022 FPHI_1545FPHI_0760FPHI_0558
ESP42895 ENT638_4101ENT638_4149ENT638_4027ENT638_3261
ERUM302409 ERGA_CDS_03140ERGA_CDS_04600ERGA_CDS_04600
ERUM254945 ERWE_CDS_03190ERWE_CDS_04700ERWE_CDS_04700
ELIT314225 ELI_10630ELI_10635ELI_11540ELI_11540
EFER585054 EFER_3612EFER_4002EFER_3804EFER_0252
ECOO157 YIHAYIDCARGBARGA
ECOL83334 ECS4787ECS4640ECS4888ECS3675
ECOL585397 ECED1_4565ECED1_4397ECED1_4664ECED1_3274
ECOL585057 ECIAI39_3136ECIAI39_4310ECIAI39_3030ECIAI39_3237
ECOL585056 ECUMN_4388ECUMN_4237ECUMN_4490ECUMN_3145
ECOL585055 EC55989_4340EC55989_4176EC55989_4441EC55989_3094
ECOL585035 ECS88_4314ECS88_4129ECS88_4414ECS88_3113
ECOL585034 ECIAI1_4064ECIAI1_3885ECIAI1_4167ECIAI1_2926
ECOL481805 ECOLC_4151ECOLC_4289ECOLC_4057ECOLC_0897
ECOL469008 ECBD_4163ECBD_4327ECBD_4065ECBD_0907
ECOL439855 ECSMS35_4248ECSMS35_4072ECSMS35_4406ECSMS35_2965
ECOL413997 ECB_03750ECB_03589ECB_03844ECB_02666
ECOL409438 ECSE_4147ECSE_3991ECSE_4252ECSE_3075
ECOL405955 APECO1_2597APECO1_2754APECO1_2508APECO1_3687
ECOL364106 UTI89_C4454UTI89_C4258UTI89_C4550UTI89_C3219
ECOL362663 ECP_4075ECP_3906ECP_4172ECP_2830
ECOL331111 ECE24377A_4383ECE24377A_4215ECE24377A_4498ECE24377A_3138
ECOL316407 ECK3857:JW5930:B3865ECK3698:JW3683:B3705ECK3950:JW5553:B3959ECK2814:JW2786:B2818
ECOL199310 C4812C4629C4918C3412
ECHA205920 ECH_0782ECH_0594ECH_0594
ECAR218491 ECA0022ECA4445ECA0193ECA0999
ECAN269484 ECAJ_0293ECAJ_0444ECAJ_0444
DVUL882 DVU_1664DVU_1077DVU_1466DVU_1466
DSHI398580 DSHI_0326DSHI_0328DSHI_0324DSHI_0324
DRED349161 DRED_2558DRED_3326DRED_0273DRED_0273
DPSY177439 DP2637DP0855DP0439DP0439
DOLE96561 DOLE_1117DOLE_0102DOLE_2494DOLE_2494
DHAF138119 DSY3194DSY5057DSY0762DSY0762
DDES207559 DDE_1950DDE_2394DDE_2015DDE_2015
DARO159087 DARO_0625DARO_4201DARO_0629DARO_3584
CVIO243365 CV_4385CV_4404CV_3921CV_3355
CVES412965 COSY_0199COSY_0941COSY_0223COSY_0223
CTEP194439 CT_2155CT_0006CT_1111CT_1111
CSP78 CAUL_0639CAUL_0640CAUL_4558CAUL_4558
CSP501479 CSE45_0218CSE45_0220CSE45_0217CSE45_0217
CSAL290398 CSAL_3117CSAL_3316CSAL_2984CSAL_0713
CRUT413404 RMAG_0200RMAG_1040RMAG_0232RMAG_0232
CPSY167879 CPS_0284CPS_5050CPS_0461CPS_0465
CPHY357809 CPHY_0380CPHY_1950CPHY_1950
CPEL335992 SAR11_0466SAR11_0465SAR11_0465
CKLU431943 CKL_3348CKL_1555CKL_1555
CJEJ407148 C8J_0900C8J_0204C8J_0204
CJEJ360109 JJD26997_0823JJD26997_0224JJD26997_0224
CJEJ354242 CJJ81176_0981CJJ81176_0251CJJ81176_0251
CJEJ195099 CJE_1038CJE_0277CJE_0277
CJEJ192222 CJ0958CCJ0226CJ0226
CJAP155077 CJA_3477CJA_3823CJA_3525CJA_0479
CHYD246194 CHY_0004CHY_2263CHY_2263
CHUT269798 CHU_2716CHU_2557CHU_3086
CHOM360107 CHAB381_0652CHAB381_1022CHAB381_1022
CFET360106 CFF8240_1185CFF8240_0553CFF8240_1081CFF8240_1081
CDIF272563 CD3300CD3678CD2032CD2032
CDES477974 DAUD_2235DAUD_0341DAUD_0341
CCUR360105 CCV52592_1831CCV52592_0128CCV52592_0128
CCHL340177 CAG_1817CAG_2030CAG_0774CAG_0774
CBOT508765 CLL_A2886CLL_A3118CLL_A3118
CBEI290402 CBEI_1331CBEI_4519CBEI_4519
CAULO CC0766CC0767CC0283CC0283
CACE272562 CAC2636CAC3736CAC2389CAC2389
BWEI315730 BCERKBAB4_4314BCERKBAB4_4848BCERKBAB4_3963
BVIE269482 BCEP1808_0361BCEP1808_3310BCEP1808_3179BCEP1808_2235
BTRI382640 BT_1890BT_1889BT_0069BT_0069
BTHU412694 BALH_4062BALH_4558BALH_3745
BTHU281309 BT9727_4202BT9727_4731BT9727_3877
BTHA271848 BTH_I3037BTH_I3235BTH_I0160BTH_I1837
BSUI470137 BSUIS_B1020BSUIS_B1019BSUIS_B1021BSUIS_B1021
BSUI204722 BR_A1024BR_A1023BR_A1025BR_A1025
BSUB BSU28190BSU41040BSU11210
BSP376 BRADO0781BRADO0782BRADO0779BRADO0779
BSP36773 BCEP18194_A3478BCEP18194_A6520BCEP18194_A6447BCEP18194_A5465
BSP107806 BU432BU015BU049BU456
BQUI283165 BQ09790BQ09780BQ00620BQ00620
BPUM315750 BPUM_2460BPUM_3735BPUM_1044
BPSE320373 BURPS668_3715BURPS668_0093BURPS668_0185BURPS668_2643
BPSE320372 BURPS1710B_A4038BURPS1710B_A0319BURPS1710B_A0404BURPS1710B_A3010
BPSE272560 BPSL3182BPSL0078BPSL0200BPSL2325
BPET94624 BPET4918BPET5011BPET0434BPET1964
BPER257313 BP3649BP0495BP0383BP2335
BPAR257311 BPP0064BPP4405BPP4047BPP1704
BOVI236 GBOORFA1058GBOORFA1056GBOORFA1059GBOORFA1059
BMEL359391 BAB2_0987BAB2_0986BAB2_0988BAB2_0988
BMEL224914 BMEII0274BMEII0275BMEII0273BMEII0273
BMAL320389 BMA10247_3509BMA10247_3550BMA10247_3438BMA10247_1532
BMAL320388 BMASAVP1_A3138BMASAVP1_A2844BMASAVP1_A2910BMASAVP1_A2260
BMAL243160 BMA_2600BMA_3397BMA_3249BMA_1751
BLIC279010 BL00622BL00112BL03243
BJAP224911 BLR8099BLR8098BLR8101BLR8101
BHEN283166 BH12420BH12410BH00690BH00690
BHAL272558 BH3049BH4064BH2898
BFRA295405 BF2048BF2603BF0240
BFRA272559 BF2101BF2625BF0197
BCLA66692 ABC2633ABC4119ABC2556
BCER572264 BCA_4581BCA_5168BCA_4243
BCER405917 BCE_4560BCE_5161BCE_4201
BCER315749 BCER98_3183BCER98_3610BCER98_2827
BCER288681 BCE33L4213BCE33L4746BCE33L3885
BCER226900 BC_4476BC_5016BC_4128
BCEN331272 BCEN2424_0379BCEN2424_3163BCEN2424_3096BCEN2424_2156
BCEN331271 BCEN_2728BCEN_2549BCEN_2482BCEN_5921
BCAN483179 BCAN_B1045BCAN_B1044BCAN_B1046BCAN_B1046
BBRO257310 BB0064BB4993BB4520BB3404
BBAC360095 BARBAKC583_1049BARBAKC583_1048BARBAKC583_1326BARBAKC583_1326
BAPH372461 BCC_266BCC_007BCC_031
BAPH198804 BUSG417BUSG016BUSG046BUSG441
BANT592021 BAA_4719BAA_5294BAA_4374
BANT568206 BAMEG_4736BAMEG_5316BAMEG_4392
BANT261594 GBAA4701GBAA5263GBAA4353
BANT260799 BAS4366BAS4889BAS4038
BAMY326423 RBAM_025250RBAM_038140RBAM_011210
BAMB398577 BAMMC406_0307BAMMC406_3099BAMMC406_3005BAMMC406_2066
BAMB339670 BAMB_0298BAMB_3215BAMB_3143BAMB_2193
BABO262698 BRUAB2_0964BRUAB2_0963BRUAB2_0965BRUAB2_0965
ASP76114 EBA1073EBA2842EBA4330EBA1090
ASP62977 ACIAD3228ACIAD3681ACIAD0903ACIAD0039
ASP62928 AZO2822AZO3989AZO3244AZO2830
ASP232721 AJS_0709AJS_4140AJS_0588AJS_2327
ASAL382245 ASA_4129ASA_4382ASA_0579ASA_2577
APLE434271 APJL_0094APJL_1456APJL_0248APJL_0696
APLE416269 APL_0094APL_1424APL_0243APL_0698
AMET293826 AMET_1073AMET_4799AMET_3381AMET_3381
AHYD196024 AHA_0268AHA_4281AHA_0594AHA_2569
AFER243159 AFE_0023AFE_2992AFE_2772AFE_2376
AEHR187272 MLG_2857MLG_2882MLG_0084MLG_0363
ADEH290397 ADEH_4358ADEH_0587ADEH_0587
ACRY349163 ACRY_2142ACRY_2141ACRY_2143ACRY_2143
ACAU438753 AZC_4050AZC_4053AZC_0701
ABUT367737 ABU_0981ABU_1622ABU_2068ABU_2068
ABOR393595 ABO_2652ABO_2753ABO_0210ABO_2306
ABAU360910 BAV0066BAV3416BAV3167BAV2242
ABAC204669 ACID345_1596ACID345_0217ACID345_4160
AAVE397945 AAVE_0983AAVE_4793AAVE_4139AAVE_2553
AAEO224324 AQ_175AQ_2068AQ_2068


Organism features enriched in list (features available for 296 out of the 317 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Food_poisoning 0.002109799
Endospores:No 6.847e-1268211
GC_Content_Range4:0-40 1.259e-1464213
GC_Content_Range4:40-60 4.238e-8145224
GC_Content_Range4:60-100 0.004590586145
GC_Content_Range7:0-30 0.00004711147
GC_Content_Range7:30-40 4.189e-953166
GC_Content_Range7:50-60 5.161e-879107
GC_Content_Range7:60-70 0.000290085134
GC_Content_Range7:70-100 0.0043804111
Genome_Size_Range5:0-2 1.121e-2129155
Genome_Size_Range5:4-6 1.249e-22147184
Genome_Size_Range9:0-1 0.0000710427
Genome_Size_Range9:1-2 2.115e-1625128
Genome_Size_Range9:2-3 0.000196944120
Genome_Size_Range9:4-5 3.316e-107696
Genome_Size_Range9:5-6 2.984e-107188
Genome_Size_Range9:6-8 0.00463982738
Gram_Stain:Gram_Neg 1.908e-28234333
Gram_Stain:Gram_Pos 2.782e-1240150
Habitat:Host-associated 1.632e-678206
Habitat:Multiple 3.685e-6115178
Habitat:Terrestrial 0.00127292431
Motility:No 5.607e-1832151
Motility:Yes 9.366e-19188267
Optimal_temp.:- 0.0009315148257
Optimal_temp.:25-30 0.00198571619
Optimal_temp.:30-37 0.0022953318
Optimal_temp.:37 0.000536739106
Shape:Coccus 3.089e-101682
Shape:Rod 1.111e-15223347
Shape:Sphere 0.0002134219
Temp._range:Hyperthermophilic 0.0092129623
Temp._range:Psychrophilic 0.002109799



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 146
Effective number of orgs (counting one per cluster within 468 clusters): 109

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA11
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RCON272944 ncbi Rickettsia conorii Malish 71
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 531
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MLEP272631 ncbi Mycobacterium leprae TN0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FMAG334413 ncbi Finegoldia magna ATCC 293281
FALN326424 ncbi Frankia alni ACN14a1
EFAE226185 ncbi Enterococcus faecalis V5831
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBLO203907 ncbi Candidatus Blochmannia floridanus1
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  EG11203   EG11197   EG10064   EG10063   
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TROS309801 TRD_1085
TPEN368408
TPAL243276
TKOD69014
TDEN243275 TDE_2396
TACI273075
STRO369723 STROP_1890
STOK273063
SSUI391296 SSU98_0838
SSUI391295
SSOL273057
SSAP342451 SSP0223
SPYO370554 MGAS10750_SPY0784
SPYO370553 MGAS2096_SPY0764
SPYO370552 MGAS10270_SPY0750
SPYO370551 MGAS9429_SPY0748
SPYO319701 M28_SPY0672
SPYO293653 M5005_SPY0692
SPYO286636 M6_SPY0709
SPYO198466 SPYM3_0605
SPYO193567 SPS1248
SPYO186103 SPYM18_0947
SPYO160490 SPY0886
SPNE488221 SP70585_1609
SPNE487214 SPH_1682
SPNE487213 SPT_1508
SPNE171101 SPR1426
SPNE170187 SPN05360
SPNE1313 SPJ_1474
SMAR399550
SHAE279808 SH1254
SAGA211110 GBS1382
SAGA208435 SAG_1311
SAGA205921 SAK_1342
SACI330779
RSP101510 RHA1_RO00954
RRIC452659 RRIOWA_0098
RRIC392021 A1G_00475
RCON272944 RC0074
RCAS383372 RCAS_1427
RCAN293613 A1E_00230
PTOR263820
PPEN278197 PEPE_1140
PISL384616
PINT246198 PIN_0520
PHOR70601
PGIN242619 PG_0346
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747 PPA1348
PABY272844
NSEN222891 NSE_0402
NPHA348780
MVAN350058
MTUB419947
MTUB336982
MTBRV
MTBCDC
MSYN262723 MS53_0650
MSP189918 MKMS_3014
MSP164757 MJLS_2985
MSP164756 MMCS_2970
MSME246196
MSED399549
MPUL272635 MYPU_2390
MPNE272634
MPEN272633
MMYC272632 MSC_0290
MMOB267748
MLEP272631
MHYO295358
MHYO262722
MHYO262719
MGIL350054 MFLV_3528
MGEN243273
MFLO265311 MFL357
MCAP340047 MCAP_0245
MBOV410289
MBOV233413
MAVI243243 MAV_3116
MART243272
MABS561007 MAB_2338
LSAK314315 LSA1060
LREU557436 LREU_0654
LCAS321967
LBRE387344 LVIS_1386
KRAD266940 KRAD_3159
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP1343
HPYL357544 HPAG1_1376
HPY HP1450
HMUK485914
HMAR272569
HBUT415426
HAUR316274
HACI382638 HAC_0169
FMAG334413 FMG_1045
FALN326424 FRAAL5206
EFAE226185 EF_1916
DSP255470 CBDBA1180
DSP216389 DEHABAV1_1068
DRAD243230 DR_2442
DGEO319795 DGEO_0079
DETH243164 DET_1257
CTRA471473
CTRA471472
CTET212717
CSUL444179
CPRO264201 PC0235
CPNE182082 CPB0319
CPNE138677 CPJ0310
CPNE115713 CPN0310
CPNE115711 CP_0448
CMUR243161
CMAQ397948
CKOR374847
CGLU196627 CG1582
CFEL264202
CCON360104 CCC13826_1623
CCAV227941
CBLO203907 BFL012
CABO218497
BXEN266265
BTUR314724
BLON206672
BHER314723
BGAR290434 BG0449
BBUR224326 BB_0442
BAFZ390236 BAPKO_0464
AYEL322098
AURANTIMONAS
APER272557
AMAR234826 AM460
ALAI441768
AAUR290340 AAUR_1633


Organism features enriched in list (features available for 140 out of the 146 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000436614112
Disease:Pharyngitis 9.466e-688
Disease:Wide_range_of_infections 1.125e-71111
Disease:bronchitis_and_pneumonitis 9.466e-688
Endospores:No 6.311e-1894211
Endospores:Yes 4.058e-6153
GC_Content_Range4:0-40 0.000144369213
GC_Content_Range4:40-60 0.002977741224
GC_Content_Range7:0-30 0.00172252047
GC_Content_Range7:50-60 0.000158712107
Genome_Size_Range5:0-2 8.726e-1878155
Genome_Size_Range5:4-6 3.089e-1016184
Genome_Size_Range9:0-1 1.514e-102227
Genome_Size_Range9:1-2 9.789e-956128
Genome_Size_Range9:3-4 0.0002566777
Genome_Size_Range9:4-5 0.0000143896
Genome_Size_Range9:5-6 0.0000844888
Gram_Stain:Gram_Neg 7.631e-1442333
Gram_Stain:Gram_Pos 4.434e-759150
Habitat:Aquatic 0.00583301391
Habitat:Host-associated 4.984e-774206
Habitat:Multiple 0.000021824178
Habitat:Specialized 0.00355122153
Motility:No 7.097e-963151
Motility:Yes 3.730e-739267
Optimal_temp.:- 0.000180544257
Optimal_temp.:30-35 0.000948767
Optimal_temp.:37 1.585e-645106
Pathogenic_in:Animal 0.0057916866
Pathogenic_in:Human 0.000285268213
Pathogenic_in:No 0.003924042226
Pathogenic_in:Swine 0.000755855
Salinity:Extreme_halophilic 0.009318657
Salinity:Non-halophilic 0.000012643106
Shape:Coccus 2.720e-73982
Shape:Rod 1.493e-1051347
Shape:Sphere 4.013e-71519
Temp._range:Hyperthermophilic 0.00010691423



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951800.5593
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181920.5458
PWY-1269 (CMP-KDO biosynthesis I)3252490.5375
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652680.5363
PWY-5938 ((R)-acetoin biosynthesis I)3762700.5164
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002330.5163
PWY-5340 (sulfate activation for sulfonation)3852740.5161
DAPLYSINESYN-PWY (lysine biosynthesis I)3422540.5161
GLYCOCAT-PWY (glycogen degradation I)2462030.5112
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222880.5033
TYRFUMCAT-PWY (tyrosine degradation I)1841650.5024
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832710.5022
PWY-6389 ((S)-acetoin biosynthesis)3682640.5012
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912250.4951
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162840.4930
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482530.4910
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491410.4906
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552040.4848
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962260.4847
PWY-5918 (heme biosynthesis I)2722130.4829
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582990.4799
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862200.4799
PROSYN-PWY (proline biosynthesis I)4753050.4776
PWY-5913 (TCA cycle variation IV)3012270.4745
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251850.4713
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902190.4598
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831580.4574
REDCITCYC (TCA cycle variation II)1741520.4542
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911610.4444
PWY0-862 (cis-dodecenoyl biosynthesis)3432430.4420
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561390.4419
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761510.4382
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982680.4377
ARGSYN-PWY (arginine biosynthesis I)4512890.4275
PANTO-PWY (pantothenate biosynthesis I)4722970.4258
PWY-5028 (histidine degradation II)1301200.4255
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911580.4235
THISYN-PWY (thiamin biosynthesis I)5023070.4185
GALACTARDEG-PWY (D-galactarate degradation I)1511320.4133
PWY-6317 (galactose degradation I (Leloir pathway))4642910.4043



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11197   EG10064   EG10063   
EG112030.9994650.9991460.998835
EG111970.9990720.998545
EG100640.999951
EG10063



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PAIRWISE BLAST SCORES:

  EG11203   EG11197   EG10064   EG10063   
EG112030.0f0---
EG11197-0.0f0--
EG10064--0.0f0-
EG10063---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- GLUTORN-PWY (ornithine biosynthesis) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.500, average score: 0.965)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9985 EG10063 (argA) N-ACETYLTRANSFER-MONOMER (ArgA)
   *in cand* 0.9995 0.9991 EG10064 (argB) ACETYLGLUTKIN-MONOMER (acetylglutamate kinase monomer)
             0.9586 0.8752 EG10065 (argC) N-ACETYLGLUTPREDUCT-MONOMER (N-acetylglutamylphosphate reductase)
             0.9674 0.9213 EG10066 (argD) ACETYLORNTRANSAM-MONOMER (ArgD)
             0.9451 0.8723 G6944 (astC) SUCCORNTRANSAM-MONOMER (AstC)
             0.9670 0.9257 EG11286 (argE) ACETYLORNDEACET-MONOMER (ArgE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9985 EG11197 (yidC) YIDC (inner-membrane protein insertion factor)
   *in cand* 0.9994 0.9988 EG11203 (yihA) EG11203-MONOMER (cell division protein; predicted checkpoint GTPase)

- ARG+POLYAMINE-SYN (superpathway of arginine and polyamine biosynthesis) (degree of match pw to cand: 0.111, degree of match cand to pw: 0.500, average score: 0.781)
  Genes in pathway or complex:
             0.6284 0.2576 EG10963 (speE) SPERMIDINESYN-MONOMER (SpeE)
             0.5632 0.2613 EG10131 (cadA) LYSDECARBOX-MONOMER (CadA)
             0.6235 0.3518 G6094 (ldcC) LDC2-MONOMER (LdcC)
             0.7416 0.4876 EG10962 (speD) SPED-MONOMER (adenosylmethionine decarboxylase, proenzyme)
             0.5732 0.1816 EG10961 (speC) ORNDECARBOX-BIO-MONOMER (SpeC)
             0.8582 0.7833 EG10959 (speA) ARGDECARBOXBIO-MONOMER (SpeA)
             0.2227 0.0446 EG10960 (speB) AGMATIN-MONOMER (SpeB)
   *in cand* 0.9993 0.9985 EG10063 (argA) N-ACETYLTRANSFER-MONOMER (ArgA)
   *in cand* 0.9995 0.9991 EG10064 (argB) ACETYLGLUTKIN-MONOMER (acetylglutamate kinase monomer)
             0.9586 0.8752 EG10065 (argC) N-ACETYLGLUTPREDUCT-MONOMER (N-acetylglutamylphosphate reductase)
             0.9674 0.9213 EG10066 (argD) ACETYLORNTRANSAM-MONOMER (ArgD)
             0.9670 0.9257 EG11286 (argE) ACETYLORNDEACET-MONOMER (ArgE)
             0.6741 0.1900 EG10134 (carA) CARBPSYN-SMALL (CarA)
             0.4163 0.0018 EG10135 (carB) CARBPSYN-LARGE (CarB)
             0.9271 0.8442 EG10067 (argF) CHAINF-MONOMER (ArgF)
             0.9409 0.8633 EG10069 (argI) CHAINI-MONOMER (ArgI)
             0.9931 0.9866 EG11223 (argH) ARGSUCCINLYA-MONOMER (argininosuccinate lyase)
             0.9433 0.8544 EG10068 (argG) ARGSUCCINSYN-MONOMER (ArgG)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9985 EG11197 (yidC) YIDC (inner-membrane protein insertion factor)
   *in cand* 0.9994 0.9988 EG11203 (yihA) EG11203-MONOMER (cell division protein; predicted checkpoint GTPase)

- ARGSYN-PWY (arginine biosynthesis I) (degree of match pw to cand: 0.182, degree of match cand to pw: 0.500, average score: 0.905)
  Genes in pathway or complex:
             0.9433 0.8544 EG10068 (argG) ARGSUCCINSYN-MONOMER (ArgG)
             0.9931 0.9866 EG11223 (argH) ARGSUCCINLYA-MONOMER (argininosuccinate lyase)
             0.9409 0.8633 EG10069 (argI) CHAINI-MONOMER (ArgI)
             0.9271 0.8442 EG10067 (argF) CHAINF-MONOMER (ArgF)
             0.6741 0.1900 EG10134 (carA) CARBPSYN-SMALL (CarA)
             0.4163 0.0018 EG10135 (carB) CARBPSYN-LARGE (CarB)
             0.9670 0.9257 EG11286 (argE) ACETYLORNDEACET-MONOMER (ArgE)
             0.9674 0.9213 EG10066 (argD) ACETYLORNTRANSAM-MONOMER (ArgD)
             0.9586 0.8752 EG10065 (argC) N-ACETYLGLUTPREDUCT-MONOMER (N-acetylglutamylphosphate reductase)
   *in cand* 0.9995 0.9991 EG10064 (argB) ACETYLGLUTKIN-MONOMER (acetylglutamate kinase monomer)
   *in cand* 0.9993 0.9985 EG10063 (argA) N-ACETYLTRANSFER-MONOMER (ArgA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9985 EG11197 (yidC) YIDC (inner-membrane protein insertion factor)
   *in cand* 0.9994 0.9988 EG11203 (yihA) EG11203-MONOMER (cell division protein; predicted checkpoint GTPase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11203 (centered at EG11203)
EG11197 (centered at EG11197)
EG10064 (centered at EG10064)
EG10063 (centered at EG10063)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11203   EG11197   EG10064   EG10063   
414/623397/623428/623346/623
AAEO224324:0:Tyes-013371337
AAUR290340:2:Tyes---0
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