CANDIDATE ID: 1127

CANDIDATE ID: 1127

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9939767e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11573 (thiP) (b0067)
   Products of gene:
     - SFUB-MONOMER (SfuB)
     - ABC-32-CPLX (thiamin ABC transporter)
       Reactions:
        ATP + thiamin[periplasmic space] + H2O  ->  ADP + phosphate + thiamin[cytosol]

- EG10198 (cysW) (b2423)
   Products of gene:
     - CYSW-MONOMER (CysW)
     - ABC-70-CPLX (sulfate ABC transporter)
       Reactions:
        sulfate[periplasmic space] + ATP + H2O  ->  sulfate[cytosol] + phosphate + ADP
     - ABC-7-CPLX (thiosulfate ABC transporter)
       Reactions:
        sulfate[periplasmic space] + ATP + H2O  ->  sulfate[cytosol] + phosphate + ADP

- EG10197 (cysU) (b2424)
   Products of gene:
     - CYST-MONOMER (CysU)
     - ABC-70-CPLX (sulfate ABC transporter)
       Reactions:
        sulfate[periplasmic space] + ATP + H2O  ->  sulfate[cytosol] + phosphate + ADP
     - ABC-7-CPLX (thiosulfate ABC transporter)
       Reactions:
        sulfate[periplasmic space] + ATP + H2O  ->  sulfate[cytosol] + phosphate + ADP

- EG10002 (modB) (b0764)
   Products of gene:
     - MODB-MONOMER (ModB)
     - ABC-19-CPLX (molybdate ABC transporter)
       Reactions:
        ATP + molybdate[periplasmic space] + H2O  ->  ADP + phosphate + molybdate[cytosol]



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 226
Effective number of orgs (counting one per cluster within 468 clusters): 155

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TFUS269800 ncbi Thermobifida fusca YX3
TELO197221 ncbi Thermosynechococcus elongatus BP-14
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STRO369723 ncbi Salinispora tropica CNB-4403
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B4
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68033
SSON300269 ncbi Shigella sonnei Ss0464
SPRO399741 ncbi Serratia proteamaculans 5684
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23383
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1974
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAVE227882 ncbi Streptomyces avermitilis MA-46803
SARE391037 ncbi Salinispora arenicola CNS-2053
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSP101510 ncbi Rhodococcus jostii RHA13
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RCAS383372 ncbi Roseiflexus castenholzii DSM 139413
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30003
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSTU379731 ncbi Pseudomonas stutzeri A15013
PSP56811 Psychrobacter sp.3
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-13
PPUT351746 ncbi Pseudomonas putida F13
PPUT160488 ncbi Pseudomonas putida KT24403
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm703
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUT319225 ncbi Chlorobium luteolum DSM 2734
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PFLU220664 ncbi Pseudomonas fluorescens Pf-53
PFLU216595 ncbi Pseudomonas fluorescens SBW253
PFLU205922 ncbi Pseudomonas fluorescens Pf0-13
PENT384676 ncbi Pseudomonas entomophila L483
PAER208964 ncbi Pseudomonas aeruginosa PAO13
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA143
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP35761 Nocardioides sp.4
NSP103690 ncbi Nostoc sp. PCC 71203
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10903
NFAR247156 ncbi Nocardia farcinica IFM 101524
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MXAN246197 ncbi Myxococcus xanthus DK 16224
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-14
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra3
MTUB336982 ncbi Mycobacterium tuberculosis F113
MTBRV ncbi Mycobacterium tuberculosis H37Rv3
MTBCDC ncbi Mycobacterium tuberculosis CDC15513
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP400668 ncbi Marinomonas sp. MWYL14
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK3
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath4
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P23
MBOV233413 ncbi Mycobacterium bovis AF2122/973
MAVI243243 ncbi Mycobacterium avium 1043
MAQU351348 ncbi Marinobacter aquaeolei VT83
MAER449447 ncbi Microcystis aeruginosa NIES-8433
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1304
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
LCHO395495 ncbi Leptothrix cholodnii SP-63
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1974
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5504
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)3
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)3
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
HMOD498761 ncbi Heliobacterium modesticaldum Ice13
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf44
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GMET269799 ncbi Geobacter metallireducens GS-154
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FSP106370 ncbi Frankia sp. CcI33
FALN326424 ncbi Frankia alni ACN14a3
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSP78 Caulobacter sp.3
CPHY357809 ncbi Clostridium phytofermentans ISDg3
CKLU431943 ncbi Clostridium kluyveri DSM 5553
CJAP155077 Cellvibrio japonicus4
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
BWEI315730 ncbi Bacillus weihenstephanensis KBAB43
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola3
BCER405917 Bacillus cereus W3
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AHYD196024 Aeromonas hydrophila dhakensis4
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABUT367737 ncbi Arcobacter butzleri RM40183
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  EG11573   EG10198   EG10197   EG10002   
YPSE349747 YPSIP31758_3415YPSIP31758_1301YPSIP31758_1300YPSIP31758_2849
YPSE273123 YPTB0662YPTB2733YPTB2734YPTB1177
YPES386656 YPDSF_3113YPDSF_2120YPDSF_2121YPDSF_2551
YPES377628 YPN_0396YPN_1370YPN_1369YPN_2855
YPES360102 YPA_3574YPA_2202YPA_2203YPA_1053
YPES349746 YPANGOLA_A2944YPANGOLA_A2767YPANGOLA_A2768YPANGOLA_A1420
YPES214092 YPO0521YPO3013YPO3014YPO1146
YPES187410 Y3652Y1468Y1467Y3036
YENT393305 YE0641YE1196YE1195YE2912
XORY360094 XOOORF_4367XOOORF_4366XOOORF_4367XOOORF_4156
XORY342109 XOO3484XOO3483XOO3484XOO1089
XORY291331 XOO3689XOO3688XOO3689XOO1194
XFAS405440 XFASM12_0699XFASM12_0700XFASM12_0699
XFAS183190 PD_0589PD_0590PD_0589
XFAS160492 XF1345XF1346XF1345
XCAM487884 XCC-B100_3412XCC-B100_3411XCC-B100_3412XCC-B100_0977
XCAM316273 XCAORF_1135XCAORF_1136XCAORF_1135XCAORF_3541
XCAM314565 XC_3294XC_3293XC_3294XC_0911
XCAM190485 XCC0941XCC0942XCC0941XCC3201
XAXO190486 XAC1018XAC1019XAC1018XAC3359
XAUT78245 XAUT_2151XAUT_1392XAUT_2216XAUT_3201
VVUL216895 VV1_0702VV2_0687VV2_0686VV2_0328
VEIS391735 VEIS_0867VEIS_0868VEIS_0867VEIS_0867
VCHO345073 VC0395_A2118VC0395_A0067VC0395_A0066VC0395_0664
VCHO VC2538VC0540VC0539VCA0725
TFUS269800 TFU_0327TFU_0327TFU_0327
TELO197221 TLR0276TLR0276TLR0275TLR0276
STYP99287 STM0107STM2442STM2443STM0782
STRO369723 STROP_2546STROP_2546STROP_2546
SSP94122 SHEWANA3_0279SHEWANA3_3191SHEWANA3_3190SHEWANA3_0742
SSP644076 SCH4B_3047SCH4B_3546SCH4B_3545SCH4B_3724
SSP321332 CYB_0236CYB_0237CYB_0398
SSP321327 CYA_2783CYA_0468CYA_0469CYA_1846
SSP292414 TM1040_2817TM1040_3331TM1040_3332TM1040_3663
SSP1148 SLR1454SLR1453SLL0739
SSON300269 SSO_0073SSO_2512SSO_2513SSO_0716
SPRO399741 SPRO_0736SPRO_3455SPRO_3456SPRO_1304
SONE211586 SO_4447SO_3601SO_3600SO_3864
SMEL266834 SMC03870SMB21131SMB21132SMC03197
SMED366394 SMED_3108SMED_4542SMED_4543SMED_2822
SHIGELLA YABKCYSWCYSUMODB
SGLO343509 SG0432SG1707SG1708SG1708
SFLE373384 SFV_0059SFV_2476SFV_2477SFV_0576
SFLE198214 AAN41727.1AAN43983.1AAN43983.1AAN42184.1
SERY405948 SACE_0982SACE_0572SACE_0572
SENT454169 SEHA_C0113SEHA_C2702SEHA_C2703SEHA_C0909
SENT321314 SCH_0101SCH_2441SCH_2442SCH_0780
SENT295319 SPA0109SPA0424SPA0423SPA1970
SENT220341 STY0124STY2679STY2680STY0815
SENT209261 T0111T0416T0415T2105
SELO269084 SYC2402_CSYC2405_CSYC2408_CSYC2518_D
SDYS300267 SDY_0094SDY_2619SDY_2620SDY_0711
SCO SCO5647SCO3705SCO3705SCO3705
SBOY300268 SBO_0054SBO_2448SBO_2449SBO_0619
SBAL402882 SHEW185_0282SHEW185_1064SHEW185_1065SHEW185_0797
SBAL399599 SBAL195_0290SBAL195_1097SBAL195_1098SBAL195_0829
SAVE227882 SAV2619SAV1720SAV1720
SARE391037 SARE_2733SARE_2733SARE_2733
RSPH349102 RSPH17025_2799RSPH17025_0792RSPH17025_4088
RSPH349101 RSPH17029_0059RSPH17029_3434RSPH17029_3433RSPH17029_4170
RSPH272943 RSP_1392RSP_3699RSP_3698
RSP101510 RHA1_RO01271RHA1_RO01272RHA1_RO03637
RSOL267608 RSC1345RSC1346RSC1345RSP1144
RRUB269796 RRU_A3401RRU_A3402RRU_A3401RRU_A0703
RPAL316058 RPB_1046RPB_1396RPB_1397
RPAL316057 RPD_1157RPD_1376RPD_1377
RPAL316056 RPC_4009RPC_4008RPC_4019
RPAL316055 RPE_1769RPE_1758RPE_1759RPE_1759
RPAL258594 RPA0749RPA0748RPA0749
RMET266264 RMET_4841RMET_1377RMET_1376RMET_0570
RLEG216596 PRL110373PRL110372PRL110373RL4686
RFER338969 RFER_3245RFER_1760RFER_1761RFER_1761
REUT381666 H16_A2239H16_A2238H16_A2239H16_A0676
REUT264198 REUT_A1970REUT_A1969REUT_A1970REUT_A0633
RETL347834 RHE_PE00258RHE_PE00257RHE_PE00258RHE_CH04072
RCAS383372 RCAS_1235RCAS_2177RCAS_2177
PSYR223283 PSPTO_0309PSPTO_0310PSPTO_0309
PSYR205918 PSYR_0083PSYR_0082PSYR_0083
PSTU379731 PST_0210PST_0209PST_0210
PSP56811 PSYCPRWF_1135PSYCPRWF_1134PSYCPRWF_1134
PSP296591 BPRO_0162BPRO_2378BPRO_2377BPRO_2377
PPUT76869 PPUTGB1_5230PPUTGB1_5229PPUTGB1_5230
PPUT351746 PPUT_5077PPUT_5076PPUT_5077
PPUT160488 PP_5170PP_5169PP_5170
PNAP365044 PNAP_1544PNAP_1545PNAP_1544PNAP_1544
PMUL272843 PM0377PM0743PM0743
PMEN399739 PMEN_4346PMEN_4316PMEN_4317PMEN_4317
PLUT319225 PLUT_1553PLUT_1554PLUT_1553PLUT_1709
PLUM243265 PLU0618PLU1389PLU1388PLU1477
PFLU220664 PFL_0193PFL_0194PFL_0193
PFLU216595 PFLU0188PFLU0189PFLU0188
PFLU205922 PFL_0195PFL_0196PFL_0195
PENT384676 PSEEN5283PSEEN5282PSEEN5283
PAER208964 PA0282PA0281PA0282
PAER208963 PA14_03680PA14_03670PA14_03680
OCAR504832 OCAR_7385OCAR_7384OCAR_7385OCAR_7587
OANT439375 OANT_1141OANT_0122OANT_1855OANT_4253
NWIN323098 NWI_2759NWI_2758NWI_2759NWI_0339
NSP35761 NOCA_0434NOCA_0540NOCA_0539NOCA_1068
NSP103690 ALL0320ALL0321ALR2433
NMUL323848 NMUL_A0505NMUL_A0504NMUL_A0505
NMEN374833 NMCC_0173NMCC_0842NMCC_0843NMCC_0843
NMEN272831 NMC2005NMC0821NMC0822NMC0822
NMEN122587 NMA0414NMA1098NMA1100NMA1100
NMEN122586 NMB_2026NMB_0880NMB_0881NMB_0881
NHAM323097 NHAM_3559NHAM_3558NHAM_3559NHAM_0434
NGON242231 NGO2078NGO0446NGO0446
NFAR247156 NFA43290NFA14060NFA14050NFA43290
NEUT335283 NEUT_1026NEUT_1025NEUT_1026NEUT_1026
NEUR228410 NE0578NE0577NE0578NE0578
MXAN246197 MXAN_4820MXAN_4819MXAN_4820MXAN_6644
MVAN350058 MVAN_2537MVAN_3873MVAN_3874MVAN_2537
MTUB419947 MRA_2422MRA_2423MRA_1869
MTUB336982 TBFG_12426TBFG_12427TBFG_11886
MTBRV RV2398CRV2399CRV1858
MTBCDC MT2469MT2470MT1906
MSUC221988 MS1525MS1260MS1259MS1341
MSP400668 MMWYL1_3471MMWYL1_0650MMWYL1_0651MMWYL1_0966
MSME246196 MSMEG_2015MSMEG_4531MSMEG_4532MSMEG_2015
MPET420662 MPE_A3714MPE_A0125MPE_A0124MPE_A3714
MMAG342108 AMB2010AMB2011AMB2010AMB3404
MLOT266835 MLL3865MLR1668MLR1667MLL1464
MGIL350054 MFLV_2680MFLV_2679MFLV_3860
MFLA265072 MFLA_0611MFLA_0610MFLA_0611MFLA_0611
MEXT419610 MEXT_0583MEXT_0582MEXT_3633
MCAP243233 MCA_1183MCA_1182MCA_1183MCA_2579
MBOV410289 BCG_2413CBCG_2414CBCG_1894
MBOV233413 MB2420CMB2421CMB1889
MAVI243243 MAV_1784MAV_1783MAV_2861
MAQU351348 MAQU_1199MAQU_1371MAQU_1372
MAER449447 MAE_31520MAE_31530MAE_55530
LSPH444177 BSPH_0596BSPH_0595BSPH_0596BSPH_3312
LINT267671 LIC_12528LIC_12527LIC_12528LIC_12528
LINT189518 LA1156LA1157LA1156LA1156
LCHO395495 LCHO_3805LCHO_3806LCHO_3805
LBOR355277 LBJ_2148LBJ_2147LBJ_2148LBJ_2148
LBOR355276 LBL_2142LBL_2141LBL_2142LBL_2142
LBIF456481 LEPBI_I1186LEPBI_I1187LEPBI_I1187
LBIF355278 LBF_1143LBF_1144LBF_1144
KPNE272620 GKPORF_B4345GKPORF_B2089GKPORF_B2090GKPORF_B5198
JSP375286 MMA_0812MMA_2592MMA_2591MMA_2591
HMOD498761 HM1_1172HM1_1171HM1_1550
HAUR316274 HAUR_3445HAUR_0257HAUR_0258HAUR_0258
HARS204773 HEAR0836HEAR2501HEAR2500HEAR2500
GVIO251221 GLR2073GLR2074GLR2073GLL4282
GURA351605 GURA_3893GURA_3892GURA_3893GURA_3322
GSUL243231 GSU_1347GSU_1348GSU_1347GSU_2961
GMET269799 GMET_1905GMET_1904GMET_1905GMET_0513
GBET391165 GBCGDNIH1_1897GBCGDNIH1_1898GBCGDNIH1_1897GBCGDNIH1_1897
FSP106370 FRANCCI3_3985FRANCCI3_3985FRANCCI3_3985
FALN326424 FRAAL6312FRAAL6312FRAAL6312
ESP42895 ENT638_0614ENT638_2949ENT638_2950ENT638_1255
EFER585054 EFER_0081EFER_0750EFER_0749EFER_2345
ECOO157 YABKCYSWCYSUMODB
ECOL83334 ECS0071ECS3294ECS3295ECS0792
ECOL585397 ECED1_0068ECED1_2866ECED1_2867ECED1_0726
ECOL585057 ECIAI39_0072ECIAI39_2568ECIAI39_2569ECIAI39_0732
ECOL585056 ECUMN_0068ECUMN_2744ECUMN_2745ECUMN_0849
ECOL585055 EC55989_0065EC55989_2712EC55989_2713EC55989_0744
ECOL585035 ECS88_0072ECS88_2612ECS88_2613ECS88_0780
ECOL585034 ECIAI1_0067ECIAI1_2480ECIAI1_2481ECIAI1_0732
ECOL481805 ECOLC_3590ECOLC_1256ECOLC_1255ECOLC_2898
ECOL469008 ECBD_3550ECBD_1258ECBD_1257ECBD_1257
ECOL439855 ECSMS35_0071ECSMS35_2578ECSMS35_2579ECSMS35_0787
ECOL413997 ECB_00069ECB_02323ECB_02324ECB_00717
ECOL409438 ECSE_0067ECSE_2713ECSE_2714ECSE_0817
ECOL405955 APECO1_1915APECO1_4123APECO1_4122APECO1_1325
ECOL364106 UTI89_C0075UTI89_C2756UTI89_C2757UTI89_C0762
ECOL362663 ECP_0070ECP_2446ECP_2447ECP_0776
ECOL331111 ECE24377A_0069ECE24377A_2709ECE24377A_2710ECE24377A_0791
ECOL316407 ECK0068:JW0066:B0067ECK2418:JW2416:B2423ECK2419:JW2417:B2424ECK0753:JW0747:B0764
ECOL199310 C0083C2957C2958C0841
ECAR218491 ECA3845ECA0885ECA0884ECA1394
DHAF138119 DSY2957DSY2956DSY2957DSY3397
DARO159087 DARO_3692DARO_3691DARO_3692DARO_3692
CVIO243365 CV_3162CV_1829CV_1830CV_1830
CSP78 CAUL_2732CAUL_2194CAUL_2193
CPHY357809 CPHY_1828CPHY_1827CPHY_1483
CKLU431943 CKL_1801CKL_1802CKL_3086
CJAP155077 CJA_2348CJA_2347CJA_2348CJA_0317
CBLO291272 BPEN_529BPEN_530BPEN_530
CBLO203907 BFL512BFL513BFL513
CBEI290402 CBEI_4192CBEI_4191CBEI_4192CBEI_1966
BWEI315730 BCERKBAB4_1013BCERKBAB4_1012BCERKBAB4_1012
BVIE269482 BCEP1808_1554BCEP1808_1555BCEP1808_1554BCEP1808_4235
BTHA271848 BTH_I2479BTH_I2478BTH_I2479BTH_II0592
BSUI470137 BSUIS_B1235BSUIS_A0114BSUIS_A1379BSUIS_B0094
BSUI204722 BR_1758BR_0109BR_1329BR_A0089
BSP376 BRADO1071BRADO1072BRADO1071
BSP36773 BCEP18194_A4740BCEP18194_A4741BCEP18194_A4740BCEP18194_B2237
BPSE320373 BURPS668_1848BURPS668_1848BURPS668_1848BURPS668_A2565
BPSE320372 BURPS1710B_A2175BURPS1710B_A2176BURPS1710B_A2175BURPS1710B_B1023
BPSE272560 BPSL1838BPSL1837BPSL1838BPSS1787
BPET94624 BPET1905BPET1906BPET1905BPET1905
BPAR257311 BPP1656BPP1657BPP1656BPP1656
BOVI236 GBOORFA0833GBOORF0112GBOORF1340GBOORFA0089
BMEL359391 BAB1_1771BAB1_0106BAB1_1350BAB2_0088
BMEL224914 BMEI0284BMEI1839BMEI0674BMEII0004
BMAL320389 BMA10247_0807BMA10247_0808BMA10247_0807BMA10247_A0329
BMAL320388 BMASAVP1_A1697BMASAVP1_A1696BMASAVP1_A1697BMASAVP1_1477
BMAL243160 BMA_1208BMA_1207BMA_1208BMA_A0298
BJAP224911 BLR1483BLR1484BLR1483BLR8161
BHAL272558 BH0514BH3129BH3128BH3328
BCLA66692 ABC1227ABC1228ABC1227ABC3373
BCIC186490 BCI_0078BCI_0077BCI_0077
BCER405917 BCE_1198BCE_1197BCE_0221
BCER226900 BC_1092BC_1093BC_1092BC_0220
BCEN331272 BCEN2424_1602BCEN2424_1603BCEN2424_1602BCEN2424_3859
BCEN331271 BCEN_1122BCEN_1123BCEN_1122BCEN_4505
BCAN483179 BCAN_A1797BCAN_A0112BCAN_A1354BCAN_B0092
BBRO257310 BB3452BB3451BB3452BB3452
BAMB398577 BAMMC406_1518BAMMC406_1519BAMMC406_1518BAMMC406_3756
BAMB339670 BAMB_1498BAMB_1499BAMB_1498BAMB_3227
BABO262698 BRUAB1_1743BRUAB1_0106BRUAB1_1329BRUAB2_0089
AVAR240292 AVA_4712AVA_4713AVA_0243
ASP76114 EBA6206EBA6207EBA6206EBA6206
ASP62977 ACIAD2594ACIAD2595ACIAD2594ACIAD1900
ASP62928 AZO1335AZO1334AZO1335AZO1335
ASP232721 AJS_2337AJS_2336AJS_2337AJS_2337
ASAL382245 ASA_3416ASA_0596ASA_0595
APLE434271 APJL_1335APJL_1889APJL_1888APJL_0269
APLE416269 APL_1321APL_1847APL_1846APL_0261
AHYD196024 AHA_0875AHA_0607AHA_0606AHA_0606
ACAU438753 AZC_1799AZC_3734AZC_3733AZC_2369
ABUT367737 ABU_2298ABU_2297ABU_2298
AAVE397945 AAVE_2546AAVE_2547AAVE_2546AAVE_2546


Organism features enriched in list (features available for 211 out of the 226 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00055052092
Arrangment:Clusters 0.0042389117
Arrangment:Filaments 0.0050826810
Disease:Brucellosis 0.006022955
Disease:Bubonic_plague 0.002146666
Disease:Dysentery 0.002146666
Endospores:No 5.673e-1043211
GC_Content_Range4:0-40 4.568e-3513213
GC_Content_Range4:40-60 0.0000399103224
GC_Content_Range4:60-100 5.588e-1795145
GC_Content_Range7:0-30 6.512e-6447
GC_Content_Range7:30-40 1.269e-269166
GC_Content_Range7:50-60 2.935e-1169107
GC_Content_Range7:60-70 2.757e-1689134
Genome_Size_Range5:0-2 1.576e-332155
Genome_Size_Range5:2-4 2.672e-842197
Genome_Size_Range5:4-6 8.908e-30128184
Genome_Size_Range5:6-10 7.757e-123947
Genome_Size_Range9:0-1 0.0004894227
Genome_Size_Range9:2-3 1.231e-622120
Genome_Size_Range9:4-5 9.322e-136696
Genome_Size_Range9:5-6 1.013e-126288
Genome_Size_Range9:6-8 3.870e-103238
Gram_Stain:Gram_Neg 4.775e-13161333
Gram_Stain:Gram_Pos 4.981e-828150
Habitat:Aquatic 0.00150572191
Habitat:Multiple 0.000101184178
Habitat:Specialized 0.00225781053
Motility:No 3.232e-730151
Motility:Yes 4.099e-7125267
Optimal_temp.:- 0.0055023106257
Optimal_temp.:25-30 1.511e-61719
Optimal_temp.:28-30 0.009687567
Oxygen_Req:Aerobic 0.000042088185
Oxygen_Req:Anaerobic 5.999e-129102
Oxygen_Req:Facultative 0.009107984201
Pathogenic_in:Plant 0.00285821115
Shape:Coccus 2.564e-61282
Shape:Rod 4.697e-10160347
Shape:Sphere 0.0018723119
Temp._range:Mesophilic 1.073e-6192473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 351
Effective number of orgs (counting one per cluster within 468 clusters): 274

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB31
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-400
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HCHE349521 ncbi Hahella chejuensis KCTC 23961
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GOXY290633 ncbi Gluconobacter oxydans 621H0
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSP1855 Frankia sp. EAN1pec1
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSAL290398 ncbi Chromohalobacter salexigens DSM 30431
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUB ncbi Bacillus subtilis subtilis 1681
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BPER257313 ncbi Bordetella pertussis Tohama I1
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCER572264 ncbi Bacillus cereus 03BB1021
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L1
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-11
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG11573   EG10198   EG10197   EG10002   
ZMOB264203
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX1623
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTEN273068
TSP28240
TSP1755
TROS309801 TRD_A0533
TPSE340099
TPET390874
TPEN368408
TPAL243276 TP_0143
TMAR243274
TLET416591 TLET_1300
TKOD69014 TK0159
TERY203124 TERY_4148
TDEN326298
TDEN292415
TDEN243275 TDE_0144
TCRU317025
TACI273075
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093 SUN_2103
SSP1131
SSOL273057
SSED425104 SSED_4396
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579 SPEA_4114
SMUT210007
SMAR399550
SLOI323850 SHEW_0093
SHAL458817 SHAL_0128
SHAE279808
SGOR29390
SEPI176280
SEPI176279
SDEN318161 SDEN_0106
SDEG203122
SAUR93062 SACOL2271
SAUR93061 SAOUHSC_02547
SAUR426430 NWMN_2178
SAUR418127 SAHV_2262
SAUR367830 SAUSA300_2229
SAUR359787 SAURJH1_2345
SAUR359786 SAURJH9_2303
SAUR282459 SAS2168
SAUR282458 SAR2362
SAUR273036 SAB2150C
SAUR196620 MW2196
SAUR158879 SA2073
SAUR158878 SAV2278
SAGA211110
SAGA208435
SAGA205921
SACI56780 SYN_00270
SACI330779
RTYP257363
RSP357808 ROSERS_1797
RSAL288705 RSAL33209_0680
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_0676
PSP312153 PNUC_0782
PSP117
PRUM264731
PPEN278197
PMOB403833 PMOB_0007
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PISL384616
PINT246198
PING357804 PING_0386
PHOR70601 PH1352
PHAL326442
PGIN242619
PFUR186497 PF1520
PDIS435591
PATL342610
PAST100379
PARS340102
PAER178306
PACN267747 PPA0505
PABY272844 PAB0543
OTSU357244
OIHE221109 OB2722
NSP387092
NSEN222891
NPHA348780
NOCE323261
MTHE349307
MTHE264732 MOTH_1823
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAR444158 MMARC6_0747
MMAR426368 MMARC7_1208
MMAR402880 MMARC5_1454
MMAR394221
MMAR368407 MEMAR_0650
MMAR267377 MMP0206
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_2009
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1552
MBAR269797 MBAR_A2559
MART243272
MAEO419665
MACE188937 MA3902
LXYL281090
LWEL386043
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
KRAD266940 KRAD_4176
ILOI283942
IHOS453591
HWAL362976
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914 HMUK_1934
HMAR272569 RRNAC0146
HHEP235279
HHAL349124
HCHE349521 HCH_01611
HBUT415426
HACI382638
GTHE420246 GTNG_0658
GOXY290633
GKAU235909 GK0769
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSP1855 FRANEAN1_2273
FRANT
FPHI484022
FNUC190304
FNOD381764 FNOD_0487
FMAG334413 FMG_0650
FJOH376686
ERUM302409
ERUM254945
ELIT314225
EFAE226185 EF_1398
ECHA205920
ECAN269484
DSP255470
DSP216389
DRED349161
DPSY177439 DP1351
DOLE96561
DNOD246195
DETH243164 DET_1160
DDES207559 DDE_3519
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439 CT_0451
CSUL444179
CSAL290398 CSAL_2676
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380 CPR_2053
CPER195103 CPF_2341
CPER195102 CPE2084
CPEL335992
CNOV386415
CMUR243161
CMIC443906 CMM_2343
CMIC31964 CMS2523
CMET456442 MBOO_0891
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHUT269798
CHOM360107
CGLU196627 CG0262
CFET360106
CFEL264202
CEFF196164 CE0188
CDIP257309
CDES477974 DAUD_0411
CCUR360105
CCON360104
CCHL340177 CAG_0414
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232 CLM_1722
CBOT515621 CLJ_B1587
CBOT508765
CBOT498213 CLD_3067
CBOT441772 CLI_1567
CBOT441771 CLC_1520
CBOT441770 CLB_1508
CBOT36826 CBO1484
CACE272562
CABO218497
BXEN266265 BXE_B2849
BTUR314724
BTRI382640
BTHU412694 BALH_0202
BTHU281309 BT9727_0188
BTHE226186
BSUB BSU33390
BSP107806
BQUI283165
BPUM315750 BPUM_3003
BPER257313 BP1458
BLON206672
BLIC279010 BL01352
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCER572264 BCA_0246
BCER315749 BCER98_0199
BCER288681 BCE33L0192
BBUR224326
BBAC360095
BBAC264462 BD0594
BAPH372461
BAPH198804
BANT592021 BAA_0234
BANT568206 BAMEG_0234
BANT261594 GBAA0202
BANT260799 BAS0201
BAMY326423 RBAM_030510
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_3747
APHA212042
APER272557
AORE350688 CLOS_2283
AMET293826 AMET_4628
AMAR329726 AM1_0772
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272 MLG_1924
ADEH290397 ADEH_0999
ACRY349163
ACEL351607 ACEL_2039
ABOR393595
ABAC204669
AAEO224324


Organism features enriched in list (features available for 330 out of the 351 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00003786992
Arrangment:Clusters 0.00071661617
Disease:Gastroenteritis 0.0023508213
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00177561111
Disease:Wide_range_of_infections 0.00177561111
Endospores:No 6.447e-10154211
GC_Content_Range4:0-40 5.090e-39192213
GC_Content_Range4:40-60 0.0010851110224
GC_Content_Range4:60-100 2.959e-2628145
GC_Content_Range7:0-30 4.159e-74247
GC_Content_Range7:30-40 3.137e-28150166
GC_Content_Range7:50-60 6.691e-934107
GC_Content_Range7:60-70 1.314e-2524134
Genome_Size_Range5:0-2 4.435e-37149155
Genome_Size_Range5:2-4 5.330e-6136197
Genome_Size_Range5:4-6 1.453e-3239184
Genome_Size_Range5:6-10 1.004e-10647
Genome_Size_Range9:0-1 0.00003162527
Genome_Size_Range9:1-2 7.572e-31124128
Genome_Size_Range9:2-3 1.706e-690120
Genome_Size_Range9:4-5 7.658e-161996
Genome_Size_Range9:5-6 2.132e-122088
Genome_Size_Range9:6-8 1.179e-9438
Gram_Stain:Gram_Neg 7.041e-14145333
Gram_Stain:Gram_Pos 7.235e-8112150
Habitat:Aquatic 0.00836616191
Habitat:Multiple 0.000122581178
Habitat:Terrestrial 0.00799181131
Motility:No 9.975e-7110151
Motility:Yes 2.119e-6124267
Optimal_temp.:25-30 0.0000291219
Optimal_temp.:30-37 0.00042091718
Optimal_temp.:35-37 0.0002882113
Oxygen_Req:Aerobic 0.000018482185
Oxygen_Req:Anaerobic 1.410e-984102
Shape:Coccus 7.319e-76682
Shape:Irregular_coccus 0.00071661617
Shape:Rod 1.630e-13154347
Shape:Sphere 0.00024611819
Temp._range:Hyperthermophilic 1.464e-62323
Temp._range:Mesophilic 0.0005547253473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652180.5801
PWY-4041 (γ-glutamyl cycle)2791870.5760
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111980.5688
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951470.5490
PWY-5340 (sulfate activation for sulfonation)3852190.5451
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392020.5297
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291960.5126
GLYCOCAT-PWY (glycogen degradation I)2461640.5106
P344-PWY (acrylonitrile degradation)2101460.4931
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491160.4848
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222200.4779
PWY-5148 (acyl-CoA hydrolysis)2271500.4693
PWY0-981 (taurine degradation IV)106910.4669
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491560.4476
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491560.4476
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001750.4421
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761230.4386
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481910.4354
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982070.4352
GLUCONSUPER-PWY (D-gluconate degradation)2291450.4288
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251430.4266
GLUCARDEG-PWY (D-glucarate degradation I)1521100.4264
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181400.4264
P381-PWY (adenosylcobalamin biosynthesis II (late cobalt incorporation))3711970.4246
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891680.4228
PWY-5938 ((R)-acetoin biosynthesis I)3761980.4204
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901680.4203
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961700.4187
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741970.4180
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911680.4178
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96800.4177
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001710.4154
GALACTCAT-PWY (D-galactonate degradation)104840.4143
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112880.4118
PWY-6087 (4-chlorocatechol degradation)2231400.4116
PWY-6389 ((S)-acetoin biosynthesis)3681940.4108
GALACTITOLCAT-PWY (galactitol degradation)73660.4102
PWY-46 (putrescine biosynthesis III)1381010.4095
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582200.4075
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3831980.4052
TRESYN-PWY (trehalose biosynthesis I)1711160.4037
PWY-1269 (CMP-KDO biosynthesis I)3251780.4017
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171750.4007



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10198   EG10197   EG10002   
EG115730.9996260.9996530.998881
EG101980.9999480.99913
EG101970.999148
EG10002



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PAIRWISE BLAST SCORES:

  EG11573   EG10198   EG10197   EG10002   
EG115730.0f0--1.3e-11
EG10198-0.0f09.3e-16-
EG10197--0.0f0-
EG10002--1.2e-200.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-7-CPLX (thiosulfate ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
             0.9992 0.9980 EG10195 (cysP) CYSP-MONOMER (CysP)
   *in cand* 0.9997 0.9991 EG10197 (cysU) CYST-MONOMER (CysU)
   *in cand* 0.9997 0.9991 EG10198 (cysW) CYSW-MONOMER (CysW)
             0.9994 0.9983 EG10183 (cysA) CYSA-MONOMER (CysA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9989 EG10002 (modB) MODB-MONOMER (ModB)
   *in cand* 0.9995 0.9989 EG11573 (thiP) SFUB-MONOMER (SfuB)

- ABC-70-CPLX (sulfate ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
             0.9994 0.9983 EG10183 (cysA) CYSA-MONOMER (CysA)
   *in cand* 0.9997 0.9991 EG10197 (cysU) CYST-MONOMER (CysU)
   *in cand* 0.9997 0.9991 EG10198 (cysW) CYSW-MONOMER (CysW)
             0.9987 0.9957 EG10929 (sbp) SBP-MONOMER (Sbp)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9989 EG10002 (modB) MODB-MONOMER (ModB)
   *in cand* 0.9995 0.9989 EG11573 (thiP) SFUB-MONOMER (SfuB)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10197 EG10198 (centered at EG10197)
EG10002 (centered at EG10002)
EG11573 (centered at EG11573)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11573   EG10198   EG10197   EG10002   
263/623233/623232/623309/623
AAUR290340:2:Tyes-0-0
AAVE397945:0:Tyes0100
ABAU360910:0:Tyes891--0
ABUT367737:0:Tyes101-
ACAU438753:0:Tyes019551954576
ACEL351607:0:Tyes---0
ADEH290397:0:Tyes---0
AEHR187272:0:Tyes0---
AHYD196024:0:Tyes259100
AMAR329726:9:Tyes---0
AMET293826:0:Tyes0---
ANAE240017:0:Tyes603--0
AORE350688:0:Tyes---0
APLE416269:0:Tyes1059162816270
APLE434271:0:Tno1045164016390
ASAL382245:5:Tyes270610-
ASP1667:3:Tyes---0
ASP232721:2:Tyes1011
ASP62928:0:Tyes1011
ASP62977:0:Tyes6316326310
ASP76114:2:Tyes0100
AVAR240292:3:Tyes-448444850
BABO262698:0:Tno---0
BABO262698:1:Tno157201164-
BAMB339670:2:Tno---0
BAMB339670:3:Tno010-
BAMB398577:2:Tno---0
BAMB398577:3:Tno010-
BAMY326423:0:Tyes---0
BANT260799:0:Tno---0
BANT261594:2:Tno---0
BANT568206:2:Tyes---0
BANT592021:2:Tno---0
BBAC264462:0:Tyes0---
BBRO257310:0:Tyes1011
BCAN483179:0:Tno---0
BCAN483179:1:Tno162501203-
BCEN331271:1:Tno---0
BCEN331271:2:Tno010-
BCEN331272:2:Tyes---0
BCEN331272:3:Tyes010-
BCER226900:1:Tyes8598608590
BCER288681:0:Tno---0
BCER315749:1:Tyes---0
BCER405917:1:Tyes-9279260
BCER572264:1:Tno---0
BCIC186490:0:Tyes-100
BCLA66692:0:Tyes0102176
BHAL272558:0:Tyes0267326722872
BJAP224911:0:Fyes0106714
BLIC279010:0:Tyes---0
BMAL243160:0:Tno---0
BMAL243160:1:Tno101-
BMAL320388:0:Tno---0
BMAL320388:1:Tno101-
BMAL320389:0:Tyes---0
BMAL320389:1:Tyes010-
BMEL224914:0:Tno---0
BMEL224914:1:Tno01590403-
BMEL359391:0:Tno---0
BMEL359391:1:Tno151601125-
BOVI236:0:Tyes567--0
BOVI236:1:Tyes-01062-
BPAR257311:0:Tno0100
BPER257313:0:Tyes0---
BPET94624:0:Tyes0100
BPSE272560:0:Tyes---0
BPSE272560:1:Tyes101-
BPSE320372:0:Tno---0
BPSE320372:1:Tno010-
BPSE320373:0:Tno---0
BPSE320373:1:Tno000-
BPUM315750:0:Tyes---0
BSP36773:1:Tyes---0
BSP36773:2:Tyes010-
BSP376:0:Tyes010-
BSUB:0:Tyes---0
BSUI204722:0:Tyes---0
BSUI204722:1:Tyes159301179-
BSUI470137:0:Tno1069--0
BSUI470137:1:Tno-01228-
BTHA271848:0:Tno---0
BTHA271848:1:Tno101-
BTHU281309:1:Tno---0
BTHU412694:1:Tno---0
BVIE269482:6:Tyes---0
BVIE269482:7:Tyes010-
BWEI315730:4:Tyes-100
BXEN266265:1:Tyes---0
CAULO:0:Tyes-10-
CBEI290402:0:Tyes2168216721680
CBLO203907:0:Tyes-011
CBLO291272:0:Tno-011
CBOT36826:1:Tno---0
CBOT441770:0:Tyes---0
CBOT441771:0:Tno---0
CBOT441772:1:Tno---0
CBOT498213:1:Tno---0
CBOT515621:2:Tyes---0
CBOT536232:0:Tno---0
CCHL340177:0:Tyes---0
CDES477974:0:Tyes---0
CDIF272563:1:Tyes1483--0
CEFF196164:0:Fyes---0
CGLU196627:0:Tyes---0
CJAP155077:0:Tyes1973197219730
CKLU431943:1:Tyes-011274
CMET456442:0:Tyes---0
CMIC31964:2:Tyes---0
CMIC443906:2:Tyes---0
CPER195102:1:Tyes---0
CPER195103:0:Tno---0
CPER289380:3:Tyes---0
CPHY357809:0:Tyes-3413400
CSAL290398:0:Tyes---0
CSP501479:6:Fyes0---
CSP501479:8:Fyes---0
CSP78:2:Tyes53910-
CTEP194439:0:Tyes---0
CVIO243365:0:Tyes1352011
DARO159087:0:Tyes1011
DDES207559:0:Tyes0---
DETH243164:0:Tyes---0
DGEO319795:0:Tyes---0
DGEO319795:1:Tyes0---
DHAF138119:0:Tyes101449
DPSY177439:2:Tyes0---
DRAD243230:2:Tyes---0
DRAD243230:3:Tyes0---
DSHI398580:5:Tyes0--0
DVUL882:1:Tyes0--0
ECAR218491:0:Tyes300410524
ECOL199310:0:Tno028032804735
ECOL316407:0:Tno023712372688
ECOL331111:6:Tno025302531680
ECOL362663:0:Tno023672368702
ECOL364106:1:Tno026772678684
ECOL405955:2:Tyes023242325606
ECOL409438:6:Tyes026932694773
ECOL413997:0:Tno022622263660
ECOL439855:4:Tno024392440685
ECOL469008:0:Tno2274100
ECOL481805:0:Tno2338101633
ECOL585034:0:Tno023962397670
ECOL585035:0:Tno024592460699
ECOL585055:0:Tno026272628684
ECOL585056:2:Tno026922693793
ECOL585057:0:Tno024962497672
ECOL585397:0:Tno027092710639
ECOL83334:0:Tno032943295744
ECOLI:0:Tno024102411701
ECOO157:0:Tno032993300746
EFAE226185:3:Tyes---0
EFER585054:1:Tyes06556542232
ESP42895:1:Tyes023552356654
FALN326424:0:Tyes0-00
FMAG334413:1:Tyes---0
FNOD381764:0:Tyes0---
FSP106370:0:Tyes0-00
FSP1855:0:Tyes---0
FSUC59374:0:Tyes-10-
GBET391165:0:Tyes0100
GKAU235909:1:Tyes---0
GMET269799:1:Tyes1406140514060
GSUL243231:0:Tyes0101608
GTHE420246:1:Tyes---0
GURA351605:0:Tyes5675665670
GVIO251221:0:Tyes0102235
HARS204773:0:Tyes0157615751575
HAUR316274:2:Tyes3211011
HCHE349521:0:Tyes0---
HDUC233412:0:Tyes0--1394
HINF281310:0:Tyes0--711
HINF374930:0:Tyes580--0
HINF71421:0:Tno0--657
HMAR272569:8:Tyes0---
HMOD498761:0:Tyes-01744
HMUK485914:1:Tyes0---
HSAL478009:4:Tyes655--0
HSOM205914:1:Tyes0--170
HSOM228400:0:Tno1154--0
HSP64091:2:Tno636--0
JSP290400:1:Tyes0--2157
JSP375286:0:Tyes0180618051805
KPNE272620:2:Tyes2195013023
KRAD266940:2:Fyes---0
LBIF355278:2:Tyes-011
LBIF456481:2:Tno-011
LBOR355276:1:Tyes1011
LBOR355277:1:Tno1011
LCHO395495:0:Tyes010-
LINT189518:1:Tyes0100
LINT267671:1:Tno1011
LSPH444177:1:Tyes1012622
MABS561007:1:Tyes-10-
MACE188937:0:Tyes---0
MAER449447:0:Tyes-012426
MAQU351348:2:Tyes0169170-
MAVI243243:0:Tyes-101069
MBAR269797:1:Tyes---0
MBOV233413:0:Tno-5355360
MBOV410289:0:Tno-5235240
MBUR259564:0:Tyes---0
MCAP243233:0:Tyes1011338
MEXT419610:0:Tyes-103066
MFLA265072:0:Tyes1011
MGIL350054:3:Tyes-101187
MHUN323259:0:Tyes---0
MLOT266835:2:Tyes18521591580
MMAG342108:0:Tyes0101394
MMAR267377:0:Tyes---0
MMAR368407:0:Tyes---0
MMAR402880:1:Tyes---0
MMAR426368:0:Tyes---0
MMAR444158:0:Tyes---0
MMAZ192952:0:Tyes872--0
MPET420662:1:Tyes3583103583
MSME246196:0:Tyes0249724980
MSP164756:1:Tno-01-
MSP164757:0:Tno-01-
MSP189918:2:Tyes-01-
MSP266779:3:Tyes542--0
MSP400668:0:Tyes285701313
MSP409:2:Tyes-01-
MSUC221988:0:Tyes2761087
MTBCDC:0:Tno-5925930
MTBRV:0:Tno-5455460
MTHE264732:0:Tyes---0
MTUB336982:0:Tno-5325330
MTUB419947:0:Tyes-5725730
MVAN350058:0:Tyes0131813190
MXAN246197:0:Tyes1011771
NARO279238:0:Tyes0--0
NEUR228410:0:Tyes1011
NEUT335283:2:Tyes1011
NFAR247156:2:Tyes2950102950
NGON242231:0:Tyes149200-
NHAM323097:2:Tyes3012301130120
NMEN122586:0:Tno1097011
NMEN122587:0:Tyes0644646646
NMEN272831:0:Tno1015011
NMEN374833:0:Tno0658659659
NMUL323848:3:Tyes101-
NSP103690:6:Tyes-012132
NSP35761:1:Tyes0106105618
NWIN323098:0:Tyes2447244624470
OANT439375:4:Tyes---0
OANT439375:5:Tyes103501768-
OCAR504832:0:Tyes101202
OIHE221109:0:Tyes0---
PABY272844:0:Tyes0---
PACN267747:0:Tyes---0
PAER208963:0:Tyes101-
PAER208964:0:Tno101-
PARC259536:0:Tyes-10-
PCAR338963:0:Tyes2575--0
PCRY335284:1:Tyes-01-
PENT384676:0:Tyes101-
PFLU205922:0:Tyes010-
PFLU216595:1:Tyes010-
PFLU220664:0:Tyes010-
PFUR186497:0:Tyes0---
PHOR70601:0:Tyes0---
PING357804:0:Tyes0---
PLUM243265:0:Fyes0794793899
PLUT319225:0:Tyes010153
PMEN399739:0:Tyes30011
PMOB403833:0:Tyes0---
PMUL272843:1:Tyes0366-366
PNAP365044:8:Tyes0100
PPRO298386:1:Tyes---0
PPRO298386:2:Tyes0---
PPUT160488:0:Tno101-
PPUT351746:0:Tyes101-
PPUT76869:0:Tno101-
PSP296591:2:Tyes0220322022202
PSP312153:0:Tyes0---
PSP56811:2:Tyes-100
PSTU379731:0:Tyes101-
PSYR205918:0:Tyes101-
PSYR223283:2:Tyes010-
PTHE370438:0:Tyes---0
RCAS383372:0:Tyes0940-940
RDEN375451:4:Tyes0--2204
RETL347834:3:Tyes101-
RETL347834:5:Tyes---0
REUT264198:3:Tyes1333133213330
REUT381666:2:Tyes1512151115120
RFER338969:1:Tyes1485011
RLEG216596:4:Tyes101-
RLEG216596:6:Tyes---0
RMET266264:1:Tyes0---
RMET266264:2:Tyes-8048030
RPAL258594:0:Tyes101-
RPAL316055:0:Tyes11011
RPAL316056:0:Tyes1011-
RPAL316057:0:Tyes0220221-
RPAL316058:0:Tyes0353354-
RPOM246200:1:Tyes0--0
RRUB269796:1:Tyes2688268926880
RSAL288705:0:Tyes---0
RSOL267608:0:Tyes---0
RSOL267608:1:Tyes010-
RSP101510:3:Fyes-012359
RSP357808:0:Tyes---0
RSPH272943:3:Tyes-10-
RSPH272943:4:Tyes0---
RSPH349101:0:Tno---0
RSPH349101:1:Tno-10-
RSPH349101:2:Tno0---
RSPH349102:3:Tyes--0-
RSPH349102:5:Tyes19880--
RXYL266117:0:Tyes0--1465
SACI56780:0:Tyes---0
SALA317655:1:Tyes0--0
SARE391037:0:Tyes0-00
SAUR158878:1:Tno---0
SAUR158879:1:Tno---0
SAUR196620:0:Tno---0
SAUR273036:0:Tno---0
SAUR282458:0:Tno---0
SAUR282459:0:Tno---0
SAUR359786:1:Tno---0
SAUR359787:1:Tno---0
SAUR367830:3:Tno---0
SAUR418127:0:Tyes---0
SAUR426430:0:Tno---0
SAUR93061:0:Fno---0
SAUR93062:1:Tno---0
SAVE227882:1:Fyes904-00
SBAL399599:3:Tyes0812813543
SBAL402882:1:Tno0774775509
SBOY300268:1:Tyes022582259529
SCO:2:Fyes1966000
SDEN318161:0:Tyes0---
SDYS300267:1:Tyes023912392585
SELO269084:0:Tyes036118
SENT209261:0:Tno02952941897
SENT220341:0:Tno022942295622
SENT295319:0:Tno03013001781
SENT321314:2:Tno023832384699
SENT454169:2:Tno024972498761
SERY405948:0:Tyes4000-0
SFLE198214:0:Tyes023162316468
SFLE373384:0:Tno022872288491
SFUM335543:0:Tyes0--0
SGLO343509:3:Tyes0130913101310
SHAL458817:0:Tyes0---
SHIGELLA:0:Tno022502251458
SLAC55218:1:Fyes631--0
SLOI323850:0:Tyes0---
SMED366394:2:Tyes-01-
SMED366394:3:Tyes282--0
SMEL266834:1:Tyes-01-
SMEL266834:2:Tyes334--0
SONE211586:1:Tyes83710261
SPEA398579:0:Tno0---
SPRO399741:1:Tyes027612762589
SSED425104:0:Tyes0---
SSON300269:1:Tyes023232324616
SSP1148:0:Tyes-1391380
SSP292414:1:Tyes-01339
SSP292414:2:Tyes0---
SSP321327:0:Tyes2204011309
SSP321332:0:Tyes-01161
SSP387093:0:Tyes-0--
SSP644076:3:Fyes-10175
SSP644076:6:Fyes0---
SSP94122:1:Tyes029922991467
STHE292459:0:Tyes0--0
STRO369723:0:Tyes0-00
STYP99287:1:Tyes023162317671
SWOL335541:0:Tyes911--0
TDEN243275:0:Tyes0---
TELO197221:0:Tyes1101
TERY203124:0:Tyes---0
TFUS269800:0:Tyes00-0
TKOD69014:0:Tyes0---
TLET416591:0:Tyes0---
TPAL243276:0:Tyes0---
TROS309801:0:Tyes0---
TTHE262724:1:Tyes1103--0
TTHE300852:2:Tyes1109--0
UMET351160:0:Tyes---0
VCHO:0:Tyes202610-
VCHO:1:Fyes---0
VCHO345073:0:Tno---0
VCHO345073:1:Tno199510-
VEIS391735:1:Tyes0100
VFIS312309:1:Tyes---0
VFIS312309:2:Tyes0---
VPAR223926:0:Tyes---0
VPAR223926:1:Tyes0---
VVUL196600:1:Tyes---0
VVUL196600:2:Tyes0---
VVUL216895:0:Tno-3393380
VVUL216895:1:Tno0---
XAUT78245:1:Tyes76308291806
XAXO190486:0:Tyes0102341
XCAM190485:0:Tyes0102260
XCAM314565:0:Tno2393239223930
XCAM316273:0:Tno0102363
XCAM487884:0:Tno2466246524660
XFAS160492:2:Tno010-
XFAS183190:1:Tyes010-
XFAS405440:0:Tno010-
XORY291331:0:Tno2528252725280
XORY342109:0:Tyes2428242724280
XORY360094:0:Tno3943923940
YENT393305:1:Tyes05455442177
YPES187410:5:Tno2201101572
YPES214092:3:Tno023862387606
YPES349746:2:Tno1480130813090
YPES360102:3:Tyes2554116511660
YPES377628:2:Tno09919902498
YPES386656:2:Tno99601429
YPSE273123:2:Tno020932094534
YPSE349747:2:Tno2095101535



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