CANDIDATE ID: 7

NUMBER OF GENES: 17
AVERAGE SCORE:    9.9976110e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.8823529e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages

GENE LIST:

- G7305 (hyfH) (b2488)
   Products of gene:
     - MONOMER0-144 (hydrogenase 4, component H)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- G7304 (hyfG) (b2487)
   Products of gene:
     - MONOMER0-150 (hydrogenase 4, large subunit)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- G7301 (hyfD) (b2484)
   Products of gene:
     - MONOMER0-141 (hydrogenase 4, component D)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- EG12093 (nuoN) (b2276)
   Products of gene:
     - NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12092 (nuoL) (b2278)
   Products of gene:
     - NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12091 (nuoK) (b2279)
   Products of gene:
     - NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12090 (nuoJ) (b2280)
   Products of gene:
     - NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12089 (nuoI) (b2281)
   Products of gene:
     - NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
     - CPLX0-3362 (connecting fragment of NADH dehydrogenase I)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12088 (nuoH) (b2282)
   Products of gene:
     - NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12084 (nuoC) (b2286)
   Products of gene:
     - NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
     - CPLX0-3362 (connecting fragment of NADH dehydrogenase I)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12083 (nuoB) (b2287)
   Products of gene:
     - NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
     - CPLX0-3362 (connecting fragment of NADH dehydrogenase I)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12082 (nuoA) (b2288)
   Products of gene:
     - NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG11774 (nuoF) (b2284)
   Products of gene:
     - NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
     - CPLX0-3361 (soluble NADH dehydrogenase fragment)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG11773 (nuoM) (b2277)
   Products of gene:
     - NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG10479 (hycF) (b2720)
   Products of gene:
     - HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10478 (hycE) (b2721)
   Products of gene:
     - HYCELARGE-MONOMER (hydrogenase 3, large subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10477 (hycD) (b2722)
   Products of gene:
     - HYCD-MONOMER (hydrogenase 3, membrane subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

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ORGANISMS CONTAINING AT LEAST 15 GENES FROM THE GROUP:

Total number of orgs: 156
Effective number of orgs (counting one per cluster within 468 clusters): 112

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
YPSE349747 ncbi	Yersinia pseudotuberculosis IP 31758	17
YPSE273123 ncbi	Yersinia pseudotuberculosis IP 32953	17
YPES386656 ncbi	Yersinia pestis Pestoides F	17
YPES377628 ncbi	Yersinia pestis Nepal516	17
YPES360102 ncbi	Yersinia pestis Antiqua	17
YPES349746 ncbi	Yersinia pestis Angola	17
YPES214092 ncbi	Yersinia pestis CO92	17
YPES187410 ncbi	Yersinia pestis KIM 10	17
YENT393305 ncbi	Yersinia enterocolitica enterocolitica 8081	17
XAUT78245 ncbi	Xanthobacter autotrophicus Py2	15
WSUC273121 ncbi	Wolinella succinogenes DSM 1740	16
TTHE300852 ncbi	Thermus thermophilus HB8	15
TTHE262724 ncbi	Thermus thermophilus HB27	15
TFUS269800 ncbi	Thermobifida fusca YX	15
STYP99287 ncbi	Salmonella enterica enterica serovar Typhimurium str. LT2	17
STRO369723 ncbi	Salinispora tropica CNB-440	16
STHE292459 ncbi	Symbiobacterium thermophilum IAM 14863	16
SSP387093 ncbi	Sulfurovum sp. NBC37-1	16
SSON300269 ncbi	Shigella sonnei Ss046	17
SPRO399741 ncbi	Serratia proteamaculans 568	17
SONE211586 ncbi	Shewanella oneidensis MR-1	17
SMEL266834 ncbi	Sinorhizobium meliloti 1021	16
SMED366394 ncbi	Sinorhizobium medicae WSM419	17
SHIGELLA ncbi	Shigella flexneri 2a str. 2457T	17
SGLO343509 ncbi	Sodalis glossinidius morsitans	17
SFUM335543 ncbi	Syntrophobacter fumaroxidans MPOB	16
SFLE373384 ncbi	Shigella flexneri 5 str. 8401	17
SFLE198214 ncbi	Shigella flexneri 2a str. 301	17
SERY405948 ncbi	Saccharopolyspora erythraea NRRL 2338	15
SENT454169 ncbi	Salmonella enterica enterica serovar Heidelberg str. SL476	17
SENT321314 ncbi	Salmonella enterica enterica serovar Choleraesuis str. SC-B67	17
SENT295319 ncbi	Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150	17
SENT220341 ncbi	Salmonella enterica enterica serovar Typhi str. CT18	17
SENT209261 ncbi	Salmonella enterica enterica serovar Typhi str. Ty2	17
SDYS300267 ncbi	Shigella dysenteriae Sd197	17
SCO ncbi	Streptomyces coelicolor A3(2)	17
SBOY300268 ncbi	Shigella boydii Sb227	17
SAVE227882 ncbi	Streptomyces avermitilis MA-4680	17
SARE391037 ncbi	Salinispora arenicola CNS-205	16
RSPH349102 ncbi	Rhodobacter sphaeroides ATCC 17025	16
RSPH349101 ncbi	Rhodobacter sphaeroides ATCC 17029	17
RSPH272943 ncbi	Rhodobacter sphaeroides 2.4.1	17
RSP357808 ncbi	Roseiflexus sp. RS-1	16
RRUB269796 ncbi	Rhodospirillum rubrum ATCC 11170	15
RPRO272947 ncbi	Rickettsia prowazekii Madrid E	15
RPAL316058 ncbi	Rhodopseudomonas palustris HaA2	17
RPAL316057 ncbi	Rhodopseudomonas palustris BisB5	17
RPAL316056 ncbi	Rhodopseudomonas palustris BisB18	17
RPAL316055 ncbi	Rhodopseudomonas palustris BisA53	17
RPAL258594 ncbi	Rhodopseudomonas palustris CGA009	17
RLEG216596 ncbi	Rhizobium leguminosarum bv. viciae 3841	16
RFEL315456 ncbi	Rickettsia felis URRWXCal2	15
REUT381666 ncbi	Ralstonia eutropha H16	16
RETL347834 ncbi	Rhizobium etli CFN 42	15
RCAS383372 ncbi	Roseiflexus castenholzii DSM 13941	16
RCAN293613 ncbi	Rickettsia canadensis McKiel	15
PSYR223283 ncbi	Pseudomonas syringae pv. tomato str. DC3000	17
PSYR205918 ncbi	Pseudomonas syringae pv. syringae B728a	17
PSP56811	Psychrobacter sp.	17
PPUT76869 ncbi	Pseudomonas putida GB-1	17
PPUT351746 ncbi	Pseudomonas putida F1	17
PPUT160488 ncbi	Pseudomonas putida KT2440	17
PMEN399739 ncbi	Pseudomonas mendocina ymp	17
PLUM243265 ncbi	Photorhabdus luminescens laumondii TTO1	17
PFLU220664 ncbi	Pseudomonas fluorescens Pf-5	16
PFLU216595 ncbi	Pseudomonas fluorescens SBW25	17
PFLU205922 ncbi	Pseudomonas fluorescens Pf0-1	17
PENT384676 ncbi	Pseudomonas entomophila L48	17
PCRY335284 ncbi	Psychrobacter cryohalolentis K5	17
PCAR338963 ncbi	Pelobacter carbinolicus DSM 2380	16
PARC259536 ncbi	Psychrobacter arcticus 273-4	17
PAER208964 ncbi	Pseudomonas aeruginosa PAO1	17
PAER208963 ncbi	Pseudomonas aeruginosa UCBPP-PA14	17
NSP387092 ncbi	Nitratiruptor sp. SB155-2	15
NSP35761	Nocardioides sp.	16
NOCE323261 ncbi	Nitrosococcus oceani ATCC 19707	17
NMUL323848 ncbi	Nitrosospira multiformis ATCC 25196	17
MVAN350058 ncbi	Mycobacterium vanbaalenii PYR-1	15
MTUB419947 ncbi	Mycobacterium tuberculosis H37Ra	15
MTUB336982 ncbi	Mycobacterium tuberculosis F11	15
MTHE264732 ncbi	Moorella thermoacetica ATCC 39073	16
MTBRV ncbi	Mycobacterium tuberculosis H37Rv	15
MTBCDC ncbi	Mycobacterium tuberculosis CDC1551	15
MSP164757 ncbi	Mycobacterium sp. JLS	15
MSP164756 ncbi	Mycobacterium sp. MCS	15
MSME246196 ncbi	Mycobacterium smegmatis MC2 155	15
MMAG342108 ncbi	Magnetospirillum magneticum AMB-1	15
MGIL350054 ncbi	Mycobacterium gilvum PYR-GCK	15
MCAP243233 ncbi	Methylococcus capsulatus Bath	17
MBOV410289 ncbi	Mycobacterium bovis BCG str. Pasteur 1173P2	15
MBOV233413 ncbi	Mycobacterium bovis AF2122/97	15
MAVI243243 ncbi	Mycobacterium avium 104	16
MABS561007 ncbi	Mycobacterium abscessus ATCC 19977	15
LCHO395495 ncbi	Leptothrix cholodnii SP-6	15
KPNE272620 ncbi	Klebsiella pneumoniae pneumoniae MGH 78578	17
JSP290400 ncbi	Jannaschia sp. CCS1	15
HPYL85963 ncbi	Helicobacter pylori J99	16
HPY ncbi	Helicobacter pylori 26695	15
HHEP235279 ncbi	Helicobacter hepaticus ATCC 51449	15
HAUR316274 ncbi	Herpetosiphon aurantiacus ATCC 23779	15
HACI382638 ncbi	Helicobacter acinonychis Sheeba	15
GURA351605 ncbi	Geobacter uraniireducens Rf4	17
GSUL243231 ncbi	Geobacter sulfurreducens PCA	16
GMET269799 ncbi	Geobacter metallireducens GS-15	17
FSP1855	Frankia sp. EAN1pec	16
FSP106370 ncbi	Frankia sp. CcI3	16
FALN326424 ncbi	Frankia alni ACN14a	15
ESP42895	Enterobacter sp.	17
ELIT314225 ncbi	Erythrobacter litoralis HTCC2594	15
EFER585054 ncbi	Escherichia fergusonii ATCC 35469	17
ECOO157 ncbi	Escherichia coli O157:H7 EDL933	17
ECOL83334	Escherichia coli O157:H7	17
ECOL585397 ncbi	Escherichia coli ED1a	17
ECOL585057 ncbi	Escherichia coli IAI39	17
ECOL585056 ncbi	Escherichia coli UMN026	17
ECOL585055 ncbi	Escherichia coli 55989	17
ECOL585035 ncbi	Escherichia coli S88	17
ECOL585034 ncbi	Escherichia coli IAI1	17
ECOL481805 ncbi	Escherichia coli ATCC 8739	17
ECOL469008 ncbi	Escherichia coli BL21(DE3)	17
ECOL439855 ncbi	Escherichia coli SMS-3-5	17
ECOL413997 ncbi	Escherichia coli B str. REL606	17
ECOL409438 ncbi	Escherichia coli SE11	17
ECOL405955 ncbi	Escherichia coli APEC O1	17
ECOL364106 ncbi	Escherichia coli UTI89	17
ECOL362663 ncbi	Escherichia coli 536	17
ECOL331111 ncbi	Escherichia coli E24377A	17
ECOL316407 ncbi	Escherichia coli K-12 substr. W3110	17
ECOL199310 ncbi	Escherichia coli CFT073	17
ECAR218491 ncbi	Pectobacterium atrosepticum SCRI1043	17
DSP255470 ncbi	Dehalococcoides sp. CBDB1	15
DSP216389 ncbi	Dehalococcoides sp. BAV1	15
DRAD243230 ncbi	Deinococcus radiodurans R1	16
DHAF138119 ncbi	Desulfitobacterium hafniense Y51	16
DGEO319795 ncbi	Deinococcus geothermalis DSM 11300	15
CSAL290398 ncbi	Chromohalobacter salexigens DSM 3043	17
CPRO264201 ncbi	Candidatus Protochlamydia amoebophila UWE25	16
CCUR360105 ncbi	Campylobacter curvus 525.92	16
CCON360104 ncbi	Campylobacter concisus 13826	16
CBLO291272 ncbi	Candidatus Blochmannia pennsylvanicus BPEN	16
CBLO203907 ncbi	Candidatus Blochmannia floridanus	16
CBEI290402 ncbi	Clostridium beijerinckii NCIMB 8052	15
BTHA271848 ncbi	Burkholderia thailandensis E264	15
BSP107806 ncbi	Buchnera aphidicola APS (Acyrthosiphon pisum)	16
BJAP224911 ncbi	Bradyrhizobium japonicum USDA 110	15
BCIC186490	Candidatus Baumannia cicadellinicola	17
BAPH198804 ncbi	Buchnera aphidicola Sg (Schizaphis graminum)	16
ASP76114 ncbi	Aromatoleum aromaticum EbN1	15
ASP62977 ncbi	Acinetobacter sp. ADP1	17
ASAL382245 ncbi	Aeromonas salmonicida salmonicida A449	17
AHYD196024	Aeromonas hydrophila dhakensis	17
AFER243159 ncbi	Acidithiobacillus ferrooxidans ATCC 23270	16
ADEH290397 ncbi	Anaeromyxobacter dehalogenans 2CP-C	17
ACRY349163 ncbi	Acidiphilium cryptum JF-5	17
ACEL351607 ncbi	Acidothermus cellulolyticus 11B	16
ACAU438753 ncbi	Azorhizobium caulinodans ORS 571	16

Names of the homologs of the genes in the group in each of these orgs

G7305

G7304

G7301

EG12093

EG12092

EG12091

EG12090

EG12089

EG12088

EG12084

EG12083

EG12082

EG11774

EG11773

EG10479

EG10478

EG10477

YPSE349747

YPSE273123

YPES386656

YPES377628

YPES360102

YPES349746

YPES214092

YPES187410

YENT393305

XAUT78245

WSUC273121

TTHE300852

TTHE262724

TFUS269800

STYP99287

STRO369723

STHE292459

SSP387093

SSON300269

SPRO399741

SONE211586

SMEL266834

SMED366394

SHIGELLA

SGLO343509

SFUM335543

SFLE373384

SFLE198214

SERY405948

SENT454169

SENT321314

SENT295319

SENT220341

SENT209261

SDYS300267

SCO

SBOY300268

SAVE227882

SARE391037

RSPH349102

RSPH349101

RSPH272943

RSP357808

RRUB269796

RPRO272947

RPAL316058

RPAL316057

RPAL316056

RPAL316055

RPAL258594

RLEG216596

RFEL315456

REUT381666

RETL347834

RCAS383372

RCAN293613

PSYR223283

PSYR205918

PSP56811

PPUT76869

PPUT351746

PPUT160488

PMEN399739

PLUM243265

PFLU220664

PFLU216595

PFLU205922

PENT384676

PCRY335284

PCAR338963

PARC259536

PAER208964

PAER208963

NSP387092

NSP35761

NOCE323261

NMUL323848

MVAN350058

MTUB419947

MTUB336982

MTHE264732

MTBRV

MTBCDC

MSP164757

MSP164756

MSME246196

MMAG342108

MGIL350054

MCAP243233

MBOV410289

MBOV233413

MAVI243243

MABS561007

LCHO395495

KPNE272620

JSP290400

HPYL85963

HPY

HHEP235279

HAUR316274

HACI382638

GURA351605

GSUL243231

GMET269799

FSP1855

FSP106370

FALN326424

ESP42895

ELIT314225

EFER585054

ECOO157

ECOL83334

ECOL585397

ECOL585057

ECOL585056

ECOL585055

ECOL585035

ECOL585034

ECOL481805

ECOL469008

ECOL439855

ECOL413997

ECOL409438

ECOL405955

ECOL364106

ECOL362663

ECOL331111

ECOL316407

ECOL199310

ECAR218491

DSP255470

DSP216389

DRAD243230

DHAF138119

DGEO319795

CSAL290398

CPRO264201

CCUR360105

CCON360104

CBLO291272

CBLO203907

CBEI290402

BTHA271848

BSP107806

BJAP224911

BCIC186490

BAPH198804

ASP76114

ASP62977

ASAL382245

AHYD196024

AFER243159

ADEH290397

ACRY349163

ACEL351607

ACAU438753

Organism features enriched in list (features available for 149 out of the 156 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	2.012e-6	7	92
Disease:Bubonic_plague	0.0002583	6	6
Disease:Dysentery	0.0002583	6	6
Disease:Gastroenteritis	0.0009011	9	13
Endospores:No	0.0004991	38	211
GC_Content_Range4:0-40	8.561e-17	15	213
GC_Content_Range4:60-100	1.612e-10	67	145
GC_Content_Range7:30-40	1.062e-14	9	166
GC_Content_Range7:40-50	0.0098696	21	117
GC_Content_Range7:50-60	5.934e-6	46	107
GC_Content_Range7:60-70	4.128e-9	61	134
Genome_Size_Range5:0-2	1.251e-8	15	155
Genome_Size_Range5:2-4	2.267e-8	24	197
Genome_Size_Range5:4-6	1.389e-15	87	184
Genome_Size_Range5:6-10	0.0001874	23	47
Genome_Size_Range9:1-2	5.806e-8	11	128
Genome_Size_Range9:2-3	1.127e-7	10	120
Genome_Size_Range9:4-5	3.754e-7	45	96
Genome_Size_Range9:5-6	5.623e-7	42	88
Genome_Size_Range9:6-8	0.0004978	19	38
Gram_Stain:Gram_Neg	6.014e-7	110	333
Gram_Stain:Gram_Pos	0.0067135	28	150
Habitat:Aquatic	0.0095985	15	91
Habitat:Multiple	0.0002960	62	178
Motility:No	0.0097685	29	151
Motility:Yes	0.0014801	83	267
Optimal_temp.:25-30	0.0004031	12	19
Oxygen_Req:Anaerobic	2.879e-6	9	102
Oxygen_Req:Facultative	0.0055317	63	201
Shape:Branched_filament	0.0041393	4	4
Shape:Coccus	2.213e-8	3	82
Shape:Rod	5.178e-6	111	347

ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 207
Effective number of orgs (counting one per cluster within 468 clusters): 153

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
ZMOB264203 ncbi	Zymomonas mobilis mobilis ZM4	0
VVUL216895 ncbi	Vibrio vulnificus CMCP6	0
VVUL196600 ncbi	Vibrio vulnificus YJ016	0
VPAR223926 ncbi	Vibrio parahaemolyticus RIMD 2210633	0
VFIS312309 ncbi	Vibrio fischeri ES114	0
VCHO345073 ncbi	Vibrio cholerae O395	0
VCHO ncbi	Vibrio cholerae O1 biovar El Tor str. N16961	0
UURE95667	Ureaplasma urealyticum serovar 13	0
UURE95664	Ureaplasma urealyticum serovar 10	0
UPAR505682 ncbi	Ureaplasma parvum serovar 3 str. ATCC 27815	0
TWHI218496 ncbi	Tropheryma whipplei TW08/27	0
TWHI203267 ncbi	Tropheryma whipplei Twist	0
TTUR377629 ncbi	Teredinibacter turnerae T7901	0
TSP28240	Thermotoga sp.	2
TSP1755	Thermoanaerobacter sp.	1
TPSE340099 ncbi	Thermoanaerobacter pseudethanolicus ATCC 33223	1
TPET390874 ncbi	Thermotoga petrophila RKU-1	1
TPAL243276 ncbi	Treponema pallidum pallidum Nichols	0
TMAR243274 ncbi	Thermotoga maritima MSB8	2
TLET416591 ncbi	Thermotoga lettingae TMO	1
TDEN243275 ncbi	Treponema denticola ATCC 35405	0
SWOL335541 ncbi	Syntrophomonas wolfei wolfei Goettingen	2
STHE322159 ncbi	Streptococcus thermophilus LMD-9	0
STHE299768 ncbi	Streptococcus thermophilus CNRZ1066	0
STHE264199 ncbi	Streptococcus thermophilus LMG 18311	0
SSUI391296 ncbi	Streptococcus suis 98HAH33	0
SSUI391295 ncbi	Streptococcus suis 05ZYH33	0
SSP94122 ncbi	Shewanella sp. ANA-3	0
SSED425104 ncbi	Shewanella sediminis HAW-EB3	1
SSAP342451 ncbi	Staphylococcus saprophyticus saprophyticus ATCC 15305	1
SPYO370554 ncbi	Streptococcus pyogenes MGAS10750	0
SPYO370553 ncbi	Streptococcus pyogenes MGAS2096	0
SPYO370552 ncbi	Streptococcus pyogenes MGAS10270	0
SPYO370551 ncbi	Streptococcus pyogenes MGAS9429	0
SPYO319701 ncbi	Streptococcus pyogenes MGAS6180	0
SPYO293653 ncbi	Streptococcus pyogenes MGAS5005	0
SPYO286636 ncbi	Streptococcus pyogenes MGAS10394	0
SPYO198466 ncbi	Streptococcus pyogenes MGAS315	0
SPYO193567 ncbi	Streptococcus pyogenes SSI-1	0
SPYO186103 ncbi	Streptococcus pyogenes MGAS8232	0
SPYO160490 ncbi	Streptococcus pyogenes M1 GAS	0
SPNE488221 ncbi	Streptococcus pneumoniae 70585	0
SPNE487214 ncbi	Streptococcus pneumoniae Hungary19A-6	0
SPNE487213 ncbi	Streptococcus pneumoniae Taiwan19F-14	0
SPNE171101 ncbi	Streptococcus pneumoniae R6	0
SPNE170187 ncbi	Streptococcus pneumoniae G54	0
SPNE1313	Streptococcus pneumoniae	0
SPEA398579 ncbi	Shewanella pealeana ATCC 700345	1
SMUT210007 ncbi	Streptococcus mutans UA159	0
SLOI323850 ncbi	Shewanella loihica PV-4	0
SHAL458817 ncbi	Shewanella halifaxensis HAW-EB4	1
SHAE279808 ncbi	Staphylococcus haemolyticus JCSC1435	1
SGOR29390	Streptococcus gordonii Challis	0
SEPI176280 ncbi	Staphylococcus epidermidis ATCC 12228	1
SEPI176279 ncbi	Staphylococcus epidermidis RP62A	1
SDEN318161 ncbi	Shewanella denitrificans OS217	0
SDEG203122 ncbi	Saccharophagus degradans 2-40	0
SBAL402882 ncbi	Shewanella baltica OS185	0
SBAL399599 ncbi	Shewanella baltica OS195	0
SAUR93062 ncbi	Staphylococcus aureus aureus COL	1
SAUR93061 ncbi	Staphylococcus aureus aureus NCTC 8325	1
SAUR426430 ncbi	Staphylococcus aureus aureus Newman	1
SAUR418127 ncbi	Staphylococcus aureus aureus Mu3	1
SAUR367830	Staphylococcus aureus aureus USA300	1
SAUR359787 ncbi	Staphylococcus aureus aureus JH1	1
SAUR359786 ncbi	Staphylococcus aureus aureus JH9	1
SAUR282459 ncbi	Staphylococcus aureus aureus MSSA476	1
SAUR282458 ncbi	Staphylococcus aureus aureus MRSA252	1
SAUR273036 ncbi	Staphylococcus aureus RF122	1
SAUR196620 ncbi	Staphylococcus aureus aureus MW2	1
SAUR158879 ncbi	Staphylococcus aureus aureus N315	1
SAUR158878 ncbi	Staphylococcus aureus aureus Mu50	1
SAGA211110 ncbi	Streptococcus agalactiae NEM316	0
SAGA208435 ncbi	Streptococcus agalactiae 2603V/R	0
SAGA205921 ncbi	Streptococcus agalactiae A909	0
SACI56780 ncbi	Syntrophus aciditrophicus SB	1
RSAL288705 ncbi	Renibacterium salmoninarum ATCC 33209	1
RALB246199	Ruminococcus albus 8	0
PTHE370438 ncbi	Pelotomaculum thermopropionicum SI	1
PSTU379731 ncbi	Pseudomonas stutzeri A1501	1
PSP117	Pirellula sp.	0
PPRO298386 ncbi	Photobacterium profundum SS9	0
PPEN278197 ncbi	Pediococcus pentosaceus ATCC 25745	0
PMUL272843 ncbi	Pasteurella multocida multocida Pm70	0
PMOB403833 ncbi	Petrotoga mobilis SJ95	2
PING357804 ncbi	Psychromonas ingrahamii 37	0
PHAL326442 ncbi	Pseudoalteromonas haloplanktis TAC125	1
PGIN242619 ncbi	Porphyromonas gingivalis W83	0
PDIS435591 ncbi	Parabacteroides distasonis ATCC 8503	1
PATL342610 ncbi	Pseudoalteromonas atlantica T6c	0
PAST100379	Onion yellows phytoplasma	0
PAER178306 ncbi	Pyrobaculum aerophilum IM2	1
OIHE221109 ncbi	Oceanobacillus iheyensis HTE831	2
MSYN262723 ncbi	Mycoplasma synoviae 53	0
MSUC221988 ncbi	Mannheimia succiniciproducens MBEL55E	0
MSTA339860 ncbi	Methanosphaera stadtmanae DSM 3091	2
MSP400668 ncbi	Marinomonas sp. MWYL1	1
MPUL272635 ncbi	Mycoplasma pulmonis UAB CTIP	0
MPNE272634 ncbi	Mycoplasma pneumoniae M129	0
MPEN272633 ncbi	Mycoplasma penetrans HF-2	0
MMYC272632 ncbi	Mycoplasma mycoides mycoides SC str. PG1	0
MMOB267748 ncbi	Mycoplasma mobile 163K	0
MLEP272631 ncbi	Mycobacterium leprae TN	0
MHYO295358 ncbi	Mycoplasma hyopneumoniae 232	0
MHYO262722 ncbi	Mycoplasma hyopneumoniae 7448	0
MHYO262719 ncbi	Mycoplasma hyopneumoniae J	0
MGEN243273 ncbi	Mycoplasma genitalium G37	0
MFLO265311 ncbi	Mesoplasma florum L1	0
MCAP340047 ncbi	Mycoplasma capricolum capricolum ATCC 27343	0
MART243272 ncbi	Mycoplasma arthritidis 158L3-1	0
MAQU351348 ncbi	Marinobacter aquaeolei VT8	1
LXYL281090 ncbi	Leifsonia xyli xyli CTCB07	0
LWEL386043 ncbi	Listeria welshimeri serovar 6b str. SLCC5334	1
LSPH444177 ncbi	Lysinibacillus sphaericus C3-41	1
LSAK314315 ncbi	Lactobacillus sakei sakei 23K	0
LREU557436 ncbi	Lactobacillus reuteri DSM 20016	0
LPLA220668 ncbi	Lactobacillus plantarum WCFS1	0
LMON265669 ncbi	Listeria monocytogenes 4b F2365	1
LMON169963 ncbi	Listeria monocytogenes EGD-e	1
LMES203120 ncbi	Leuconostoc mesenteroides mesenteroides ATCC 8293	0
LLAC272623 ncbi	Lactococcus lactis lactis Il1403	0
LLAC272622 ncbi	Lactococcus lactis cremoris SK11	0
LJOH257314 ncbi	Lactobacillus johnsonii NCC 533	0
LINT363253 ncbi	Lawsonia intracellularis PHE/MN1-00	0
LINN272626 ncbi	Listeria innocua Clip11262	1
LHEL405566 ncbi	Lactobacillus helveticus DPC 4571	0
LGAS324831 ncbi	Lactobacillus gasseri ATCC 33323	0
LDEL390333 ncbi	Lactobacillus delbrueckii bulgaricus ATCC 11842	0
LDEL321956 ncbi	Lactobacillus delbrueckii bulgaricus ATCC BAA-365	0
LCAS321967 ncbi	Lactobacillus casei ATCC 334	0
LBRE387344 ncbi	Lactobacillus brevis ATCC 367	0
LACI272621 ncbi	Lactobacillus acidophilus NCFM	0
KRAD266940 ncbi	Kineococcus radiotolerans SRS30216	1
ILOI283942 ncbi	Idiomarina loihiensis L2TR	1
HSOM228400 ncbi	Haemophilus somnus 2336	0
HSOM205914 ncbi	Haemophilus somnus 129PT	0
HINF71421 ncbi	Haemophilus influenzae Rd KW20	0
HINF374930 ncbi	Haemophilus influenzae PittEE	0
HINF281310 ncbi	Haemophilus influenzae 86-028NP	0
HDUC233412 ncbi	Haemophilus ducreyi 35000HP	0
HCHE349521 ncbi	Hahella chejuensis KCTC 2396	1
GOXY290633 ncbi	Gluconobacter oxydans 621H	0
GFOR411154 ncbi	Gramella forsetii KT0803	1
FNUC190304 ncbi	Fusobacterium nucleatum nucleatum ATCC 25586	0
FMAG334413 ncbi	Finegoldia magna ATCC 29328	1
EFAE226185 ncbi	Enterococcus faecalis V583	0
DOLE96561 ncbi	Desulfococcus oleovorans Hxd3	0
DNOD246195 ncbi	Dichelobacter nodosus VCS1703A	0
DDES207559 ncbi	Desulfovibrio desulfuricans desulfuricans G20	0
CTRA471473 ncbi	Chlamydia trachomatis L2b/UCH-1/proctitis	0
CTRA471472 ncbi	Chlamydia trachomatis 434/Bu	0
CTET212717 ncbi	Clostridium tetani E88	1
CSUL444179 ncbi	Candidatus Sulcia muelleri GWSS	0
CPSY167879 ncbi	Colwellia psychrerythraea 34H	1
CPNE182082 ncbi	Chlamydophila pneumoniae TW-183	0
CPNE138677 ncbi	Chlamydophila pneumoniae J138	0
CPNE115713 ncbi	Chlamydophila pneumoniae CWL029	0
CPNE115711 ncbi	Chlamydophila pneumoniae AR39	0
CPER289380 ncbi	Clostridium perfringens SM101	0
CPER195103 ncbi	Clostridium perfringens ATCC 13124	0
CPER195102 ncbi	Clostridium perfringens 13	0
CNOV386415 ncbi	Clostridium novyi NT	0
CMUR243161 ncbi	Chlamydia muridarum Nigg	0
CMIC443906 ncbi	Clavibacter michiganensis michiganensis NCPPB 382	1
CMIC31964 ncbi	Clavibacter michiganensis sepedonicus	1
CMAQ397948 ncbi	Caldivirga maquilingensis IC-167	1
CKLU431943 ncbi	Clostridium kluyveri DSM 555	0
CJEI306537 ncbi	Corynebacterium jeikeium K411	0
CJAP155077	Cellvibrio japonicus	1
CGLU196627 ncbi	Corynebacterium glutamicum ATCC 13032	0
CFEL264202 ncbi	Chlamydophila felis Fe/C-56	0
CEFF196164 ncbi	Corynebacterium efficiens YS-314	0
CDIP257309 ncbi	Corynebacterium diphtheriae NCTC 13129	0
CDIF272563 ncbi	Clostridium difficile 630	1
CCAV227941 ncbi	Chlamydophila caviae GPIC	0
CBOT536232 ncbi	Clostridium botulinum A2 str. Kyoto	1
CBOT515621 ncbi	Clostridium botulinum Ba4 str. 657	1
CBOT508765 ncbi	Clostridium botulinum B str. Eklund 17B	1
CBOT498213 ncbi	Clostridium botulinum B1 str. Okra	1
CBOT441772 ncbi	Clostridium botulinum F str. Langeland	1
CBOT441771 ncbi	Clostridium botulinum A str. Hall	1
CBOT441770 ncbi	Clostridium botulinum A str. ATCC 19397	1
CBOT36826	Clostridium botulinum A	1
CACE272562 ncbi	Clostridium acetobutylicum ATCC 824	0
CABO218497 ncbi	Chlamydophila abortus S26/3	0
BTUR314724 ncbi	Borrelia turicatae 91E135	0
BSUB ncbi	Bacillus subtilis subtilis 168	2
BPUM315750 ncbi	Bacillus pumilus SAFR-032	1
BLON206672 ncbi	Bifidobacterium longum NCC2705	0
BLIC279010 ncbi	Bacillus licheniformis ATCC 14580	1
BHER314723 ncbi	Borrelia hermsii DAH	0
BHAL272558 ncbi	Bacillus halodurans C-125	1
BGAR290434 ncbi	Borrelia garinii PBi	0
BCLA66692 ncbi	Bacillus clausii KSM-K16	1
BBUR224326 ncbi	Borrelia burgdorferi B31	0
BAMY326423 ncbi	Bacillus amyloliquefaciens FZB42	1
BAFZ390236 ncbi	Borrelia afzelii PKo	0
AYEL322098 ncbi	Aster yellows witches-broom phytoplasma AYWB	0
AURANTIMONAS	Aurantimonas manganoxydans SI85-9A1	0
APLE434271 ncbi	Actinobacillus pleuropneumoniae serovar 3 str. JL03	0
APLE416269 ncbi	Actinobacillus pleuropneumoniae L20	0
AORE350688 ncbi	Alkaliphilus oremlandii OhILAs	1
AMET293826 ncbi	Alkaliphilus metalliredigens QYMF	1
ALAI441768 ncbi	Acholeplasma laidlawii PG-8A	0
AFUL224325 ncbi	Archaeoglobus fulgidus DSM 4304	1
ABOR393595 ncbi	Alcanivorax borkumensis SK2	1
AAUR290340 ncbi	Arthrobacter aurescens TC1	1

Names of the homologs of the genes in the group in each of these orgs

G7305

G7304

G7301

EG12093

EG12092

EG12091

EG12090

EG12089

EG12088

EG12084

EG12083

EG12082

EG11774

EG11773

EG10479

EG10478

EG10477

ZMOB264203

VVUL216895

VVUL196600

VPAR223926

VFIS312309

VCHO345073

VCHO

UURE95667

UURE95664

UPAR505682

TWHI218496

TWHI203267

TTUR377629

TSP28240

TSP1755

TPSE340099

TPET390874

TPAL243276

TMAR243274

TM_0228

TM_1213

TLET416591

TLET_1520

TDEN243275

SWOL335541

SWOL_0657

SWOL_1700

STHE322159

STHE299768

STHE264199

SSUI391296

SSUI391295

SSP94122

SSED425104

SSED_3666

SSAP342451

SSP1823

SPYO370554

SPYO370553

SPYO370552

SPYO370551

SPYO319701

SPYO293653

SPYO286636

SPYO198466

SPYO193567

SPYO186103

SPYO160490

SPNE488221

SPNE487214

SPNE487213

SPNE171101

SPNE170187

SPNE1313

SPEA398579

SPEA_3284

SMUT210007

SLOI323850

SHAL458817

SHAL_3361

SHAE279808

SH1999

SGOR29390

SEPI176280

SE_0646

SEPI176279

SERP0538

SDEN318161

SDEG203122

SBAL402882

SBAL399599

SAUR93062

SAUR93061

SAUR426430

SAUR418127

SAUR367830

SAUR359787

SAUR359786

SAUR282459

SAUR282458

SAUR273036

SAUR196620

SAUR158879

SAUR158878

SAGA211110

SAGA208435

SAGA205921

SACI56780

SYN_00152

RSAL288705

RSAL33209_2208

RALB246199

PTHE370438

PTH_2011

PSTU379731

PST_1529

PSP117

PPRO298386

PPEN278197

PMUL272843

PMOB403833

PMOB_0724

PMOB_0889

PING357804

PHAL326442

PSHAA1004

PGIN242619

PDIS435591

BDI_1043

PATL342610

PAST100379

PAER178306

PAE1581

OIHE221109

OB1991

MSYN262723

MSUC221988

MSTA339860

MSP_1444

MSP400668

MMWYL1_2275

MPUL272635

MPNE272634

MPEN272633

MMYC272632

MMOB267748

MLEP272631

MHYO295358

MHYO262722

MHYO262719

MGEN243273

MFLO265311

MCAP340047

MART243272

MAQU351348

MAQU_2855

LXYL281090

LWEL386043

LWE2327

LSPH444177

BSPH_0608

LSAK314315

LREU557436

LPLA220668

LMON265669

LMOF2365_2351

LMON169963

LMO2378

LMES203120

LLAC272623

LLAC272622

LJOH257314

LINT363253

LINN272626

LIN2477

LHEL405566

LGAS324831

LDEL390333

LDEL321956

LCAS321967

LBRE387344

LACI272621

KRAD266940

KRAD_0046

ILOI283942

IL1907

HSOM228400

HSOM205914

HINF71421

HINF374930

HINF281310

HDUC233412

HCHE349521

HCH_00804

GOXY290633

GFOR411154

GFO_3553

FNUC190304

FMAG334413

FMG_1155

EFAE226185

DOLE96561

DNOD246195

DDES207559

CTRA471473

CTRA471472

CTET212717

CTC_01338

CSUL444179

CPSY167879

CPS_3818

CPNE182082

CPNE138677

CPNE115713

CPNE115711

CPER289380

CPER195103

CPER195102

CNOV386415

CMUR243161

CMIC443906

CMM_1087

CMIC31964

CMS1407

CMAQ397948

CMAQ_0428

CKLU431943

CJEI306537

CJAP155077

CJA_0046

CGLU196627

CFEL264202

CEFF196164

CDIP257309

CDIF272563

CD3406

CCAV227941

CBOT536232

CBOT515621

CBOT508765

CBOT498213

CBOT441772

CBOT441771

CBOT441770

CBOT36826

CACE272562

CABO218497

BTUR314724

BSUB

BSU31600

BPUM315750

BPUM_2829

BLON206672

BLIC279010

BL02544

BHER314723

BHAL272558

BH1319

BGAR290434

BCLA66692

ABC0787

BBUR224326

BAMY326423

RBAM_028680

BAFZ390236

AYEL322098

AURANTIMONAS

APLE434271

APLE416269

AORE350688

CLOS_2251

AMET293826

AMET_4100

ALAI441768

AFUL224325

AF_1831

ABOR393595

ABO_2658

AAUR290340

AAUR_3679

Organism features enriched in list (features available for 194 out of the 207 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	5.173e-10	57	92
Arrangment:Clusters	1.718e-7	16	17
Arrangment:Pairs	0.0004742	52	112
Disease:Botulism	0.0039407	5	5
Disease:Meningitis	0.0060811	6	7
Disease:Pharyngitis	0.0001363	8	8
Disease:Pneumonia	0.0030117	9	12
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever	4.563e-6	11	11
Disease:Wide_range_of_infections	4.563e-6	11	11
Disease:bronchitis_and_pneumonitis	0.0001363	8	8
Endospores:No	8.809e-8	99	211
GC_Content_Range4:0-40	4.135e-15	114	213
GC_Content_Range4:60-100	2.035e-17	10	145
GC_Content_Range7:0-30	5.950e-8	33	47
GC_Content_Range7:30-40	3.836e-7	81	166
GC_Content_Range7:40-50	0.0002135	55	117
GC_Content_Range7:50-60	5.250e-7	15	107
GC_Content_Range7:60-70	3.339e-18	7	134
Genome_Size_Range5:0-2	0.0002246	69	155
Genome_Size_Range5:2-4	0.0001202	85	197
Genome_Size_Range5:4-6	3.343e-6	38	184
Genome_Size_Range5:6-10	7.016e-7	2	47
Genome_Size_Range9:0-1	9.176e-6	20	27
Genome_Size_Range9:2-3	9.232e-6	60	120
Genome_Size_Range9:4-5	0.0097566	23	96
Genome_Size_Range9:5-6	0.0001366	15	88
Genome_Size_Range9:6-8	0.0000236	2	38
Gram_Stain:Gram_Neg	1.127e-9	77	333
Gram_Stain:Gram_Pos	3.961e-22	99	150
Habitat:Host-associated	0.0000692	89	206
Habitat:Specialized	0.0073248	10	53
Motility:No	7.369e-8	77	151
Motility:Yes	0.0002724	70	267
Optimal_temp.:-	1.625e-7	57	257
Optimal_temp.:30-35	0.0060811	6	7
Optimal_temp.:30-37	5.721e-8	17	18
Optimal_temp.:37	0.0001857	51	106
Oxygen_Req:Aerobic	3.064e-11	28	185
Oxygen_Req:Facultative	1.475e-13	107	201
Pathogenic_in:Human	0.0000235	93	213
Pathogenic_in:No	0.0063427	63	226
Pathogenic_in:Swine	0.0039407	5	5
Salinity:Non-halophilic	0.0003922	50	106
Shape:Coccus	4.757e-9	51	82
Shape:Irregular_coccus	0.0080830	1	17
Shape:Sphere	4.598e-6	16	19
Temp._range:Mesophilic	0.0003216	172	473
Temp._range:Thermophilic	0.0060500	5	35

ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 199
Effective number of orgs (counting one per cluster within 468 clusters): 170

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	Pvalue	# genes in tgt genome found in org	# genes in group found in org
NSEN222891 ncbi	Neorickettsia sennetsu Miyayama	3.580e-13	250	14
BCIC186490	Candidatus Baumannia cicadellinicola	2.692e-12	675	17
RPRO272947 ncbi	Rickettsia prowazekii Madrid E	3.307e-12	389	15
HPYL85963 ncbi	Helicobacter pylori J99	4.907e-12	526	16
RCAN293613 ncbi	Rickettsia canadensis McKiel	6.079e-12	405	15
CPRO264201 ncbi	Candidatus Protochlamydia amoebophila UWE25	1.947e-11	573	16
BAPH372461 ncbi	Buchnera aphidicola Cc (Cinara cedri)	4.335e-11	351	14
BAPH198804 ncbi	Buchnera aphidicola Sg (Schizaphis graminum)	7.092e-11	621	16
OTSU357244 ncbi	Orientia tsutsugamushi Boryong	7.512e-11	274	13
RFEL315456 ncbi	Rickettsia felis URRWXCal2	7.848e-11	480	15
BSP107806 ncbi	Buchnera aphidicola APS (Acyrthosiphon pisum)	1.122e-10	639	16
CBLO203907 ncbi	Candidatus Blochmannia floridanus	1.710e-10	656	16
RTYP257363 ncbi	Rickettsia typhi Wilmington	1.767e-10	388	14
HACI382638 ncbi	Helicobacter acinonychis Sheeba	1.784e-10	507	15
HPY ncbi	Helicobacter pylori 26695	2.683e-10	521	15
CBLO291272 ncbi	Candidatus Blochmannia pennsylvanicus BPEN	4.025e-10	692	16
APHA212042 ncbi	Anaplasma phagocytophilum HZ	7.821e-10	328	13
WPIP80849	Wolbachia endosymbiont of Brugia malayi	9.517e-10	333	13
CCON360104 ncbi	Campylobacter concisus 13826	1.369e-9	747	16
DSP216389 ncbi	Dehalococcoides sp. BAV1	1.517e-9	585	15
DSP255470 ncbi	Dehalococcoides sp. CBDB1	1.766e-9	591	15
CCUR360105 ncbi	Campylobacter curvus 525.92	1.804e-9	760	16
RBEL391896 ncbi	Rickettsia bellii OSU 85-389	2.080e-9	463	14
ECAN269484 ncbi	Ehrlichia canis Jake	2.260e-9	356	13
RBEL336407 ncbi	Rickettsia bellii RML369-C	3.852e-9	484	14
WPIP955	Wolbachia pipientis	5.809e-9	383	13
HHEP235279 ncbi	Helicobacter hepaticus ATCC 51449	7.290e-9	650	15
HPYL357544 ncbi	Helicobacter pylori HPAG1	1.070e-8	521	14
ACEL351607 ncbi	Acidothermus cellulolyticus 11B	1.531e-8	869	16
SSP387093 ncbi	Sulfurovum sp. NBC37-1	1.560e-8	870	16
WSUC273121 ncbi	Wolinella succinogenes DSM 1740	1.648e-8	873	16
RAKA293614 ncbi	Rickettsia akari Hartford	1.683e-8	416	13
RRIC392021 ncbi	Rickettsia rickettsii Sheila Smith	1.683e-8	416	13
FSP106370 ncbi	Frankia sp. CcI3	1.905e-8	881	16
RRIC452659 ncbi	Rickettsia rickettsii Iowa	2.149e-8	424	13
RCON272944 ncbi	Rickettsia conorii Malish 7	2.651e-8	431	13
RMAS416276 ncbi	Rickettsia massiliae MTU5	3.558e-8	441	13
ERUM254945 ncbi	Ehrlichia ruminantium Welgevonden	3.744e-8	337	12
DETH243164 ncbi	Dehalococcoides ethenogenes 195	4.078e-8	574	14
ERUM302409 ncbi	Ehrlichia ruminantium Gardel	4.159e-8	340	12
AMAR234826 ncbi	Anaplasma marginale St. Maries	4.945e-8	345	12
MAVI243243 ncbi	Mycobacterium avium 104	5.346e-8	940	16
MBUR259564 ncbi	Methanococcoides burtonii DSM 6242	6.633e-8	463	13
NPHA348780 ncbi	Natronomonas pharaonis DSM 2160	6.819e-8	464	13
CHOM360107 ncbi	Campylobacter hominis ATCC BAA-381	1.008e-7	613	14
MBAR269797 ncbi	Methanosarcina barkeri Fusaro	1.345e-7	626	14
NSP387092 ncbi	Nitratiruptor sp. SB155-2	1.703e-7	804	15
PMAR74547 ncbi	Prochlorococcus marinus MIT 9313	1.985e-7	644	14
PARC259536 ncbi	Psychrobacter arcticus 273-4	2.397e-7	1312	17
STRO369723 ncbi	Salinispora tropica CNB-440	2.745e-7	1042	16
DRAD243230 ncbi	Deinococcus radiodurans R1	3.292e-7	1054	16
SARE391037 ncbi	Salinispora arenicola CNS-205	3.711e-7	1062	16
MTBCDC ncbi	Mycobacterium tuberculosis CDC1551	4.363e-7	857	15
HSP64091 ncbi	Halobacterium sp. NRC-1	4.622e-7	417	12
MTBRV ncbi	Mycobacterium tuberculosis H37Rv	5.088e-7	866	15
FSP1855	Frankia sp. EAN1pec	5.135e-7	1084	16
NOCE323261 ncbi	Nitrosococcus oceani ATCC 19707	5.151e-7	1372	17
MBOV233413 ncbi	Mycobacterium bovis AF2122/97	5.176e-7	867	15
MTUB336982 ncbi	Mycobacterium tuberculosis F11	5.445e-7	870	15
MBOV410289 ncbi	Mycobacterium bovis BCG str. Pasteur 1173P2	5.445e-7	870	15
MTUB419947 ncbi	Mycobacterium tuberculosis H37Ra	5.538e-7	871	15
NMUL323848 ncbi	Nitrosospira multiformis ATCC 25196	5.619e-7	1379	17
HSAL478009 ncbi	Halobacterium salinarum R1	7.791e-7	436	12
TACI273075 ncbi	Thermoplasma acidophilum DSM 1728	7.994e-7	331	11
CFET360106 ncbi	Campylobacter fetus fetus 82-40	9.304e-7	721	14
ADEH290397 ncbi	Anaeromyxobacter dehalogenans 2CP-C	1.220e-6	1443	17
SCO ncbi	Streptomyces coelicolor A3(2)	1.250e-6	1445	17
HWAL362976 ncbi	Haloquadratum walsbyi DSM 16790	1.495e-6	461	12
PCRY335284 ncbi	Psychrobacter cryohalolentis K5	1.509e-6	1461	17
SAVE227882 ncbi	Streptomyces avermitilis MA-4680	1.776e-6	1475	17
ECHA205920 ncbi	Ehrlichia chaffeensis Arkansas	1.803e-6	357	11
CPEL335992 ncbi	Candidatus Pelagibacter ubique HTCC1062	1.900e-6	603	13
PSP56811	Psychrobacter sp.	2.063e-6	1488	17
TTHE300852 ncbi	Thermus thermophilus HB8	2.108e-6	954	15
TTHE262724 ncbi	Thermus thermophilus HB27	2.311e-6	960	15
MCAP243233 ncbi	Methylococcus capsulatus Bath	2.621e-6	1509	17
GMET269799 ncbi	Geobacter metallireducens GS-15	2.743e-6	1513	17
RPAL316057 ncbi	Rhodopseudomonas palustris BisB5	3.283e-6	1529	17
BTRI382640 ncbi	Bartonella tribocorum CIP 105476	3.340e-6	792	14
ACRY349163 ncbi	Acidiphilium cryptum JF-5	3.395e-6	1532	17
GURA351605 ncbi	Geobacter uraniireducens Rf4	4.010e-6	1547	17
NSP35761	Nocardioides sp.	4.088e-6	1236	16
AAEO224324 ncbi	Aquifex aeolicus VF5	4.308e-6	807	14
RSP357808 ncbi	Roseiflexus sp. RS-1	4.357e-6	1241	16
RCAS383372 ncbi	Roseiflexus castenholzii DSM 13941	4.469e-6	1243	16
LINT267671 ncbi	Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130	4.764e-6	813	14
FALN326424 ncbi	Frankia alni ACN14a	5.146e-6	1014	15
MABS561007 ncbi	Mycobacterium abscessus ATCC 19977	5.373e-6	1017	15
RPAL316058 ncbi	Rhodopseudomonas palustris HaA2	5.567e-6	1577	17
LINT189518 ncbi	Leptospira interrogans serovar Lai str. 56601	5.715e-6	824	14
RPAL316055 ncbi	Rhodopseudomonas palustris BisA53	6.070e-6	1585	17
CJEJ195099 ncbi	Campylobacter jejuni RM1221	7.556e-6	673	13
TFUS269800 ncbi	Thermobifida fusca YX	7.659e-6	1042	15
AFER243159 ncbi	Acidithiobacillus ferrooxidans ATCC 23270	8.951e-6	1299	16
RSPH272943 ncbi	Rhodobacter sphaeroides 2.4.1	9.490e-6	1627	17
PMAR167539 ncbi	Prochlorococcus marinus marinus CCMP1375	0.0000109	547	12
MTHE264732 ncbi	Moorella thermoacetica ATCC 39073	0.0000118	1322	16
RPAL258594 ncbi	Rhodopseudomonas palustris CGA009	0.0000126	1654	17
RSPH349101 ncbi	Rhodobacter sphaeroides ATCC 17029	0.0000126	1654	17
HMUK485914 ncbi	Halomicrobium mukohataei DSM 12286	0.0000134	557	12
PTOR263820 ncbi	Picrophilus torridus DSM 9790	0.0000135	324	10
ELIT314225 ncbi	Erythrobacter litoralis HTCC2594	0.0000150	1091	15
CJEJ407148 ncbi	Campylobacter jejuni jejuni 81116	0.0000153	712	13
SFUM335543 ncbi	Syntrophobacter fumaroxidans MPOB	0.0000160	1348	16
BBAC360095 ncbi	Bartonella bacilliformis KC583	0.0000170	718	13
LBIF355278 ncbi	Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)	0.0000188	900	14
LBIF456481 ncbi	Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)	0.0000188	900	14
RPAL316056 ncbi	Rhodopseudomonas palustris BisB18	0.0000193	1696	17
ASP62977 ncbi	Acinetobacter sp. ADP1	0.0000260	1726	17
LBOR355276 ncbi	Leptospira borgpetersenii serovar Hardjo-bovis L550	0.0000269	745	13
DGEO319795 ncbi	Deinococcus geothermalis DSM 11300	0.0000306	1146	15
MMAZ192952 ncbi	Methanosarcina mazei Go1	0.0000316	600	12
MGIL350054 ncbi	Mycobacterium gilvum PYR-GCK	0.0000356	1158	15
TDEN326298 ncbi	Sulfurimonas denitrificans DSM 1251	0.0000368	764	13
BHEN283166 ncbi	Bartonella henselae Houston-1	0.0000507	784	13
STHE292459 ncbi	Symbiobacterium thermophilum IAM 14863	0.0000521	1453	16
PMAR167546 ncbi	Prochlorococcus marinus MIT 9301	0.0000580	495	11
MSP164756 ncbi	Mycobacterium sp. MCS	0.0000582	1198	15
CCHL340177 ncbi	Chlorobium chlorochromatii CaD3	0.0000602	795	13
MSP164757 ncbi	Mycobacterium sp. JLS	0.0000672	1210	15
PCAR338963 ncbi	Pelobacter carbinolicus DSM 2380	0.0000710	1482	16
PMAR93060 ncbi	Prochlorococcus marinus MIT 9215	0.0000827	512	11
MACE188937 ncbi	Methanosarcina acetivorans C2A	0.0000831	653	12
MVAN350058 ncbi	Mycobacterium vanbaalenii PYR-1	0.0000914	1236	15
MTHE349307 ncbi	Methanosaeta thermophila PT	0.0001003	399	10
GSUL243231 ncbi	Geobacter sulfurreducens PCA	0.0001088	1523	16
CJEJ360109 ncbi	Campylobacter jejuni doylei 269.97	0.0001212	675	12
TVOL273116 ncbi	Thermoplasma volcanium GSS1	0.0001353	305	9
BBAC264462 ncbi	Bdellovibrio bacteriovorus HD100	0.0001393	1045	14
PMAR59920 ncbi	Prochlorococcus marinus NATL2A	0.0001415	539	11
CJEJ192222 ncbi	Campylobacter jejuni jejuni NCTC 11168	0.0001505	688	12
ABUT367737 ncbi	Arcobacter butzleri RM4018	0.0001681	864	13
HAUR316274 ncbi	Herpetosiphon aurantiacus ATCC 23779	0.0001714	1291	15
CJEJ354242 ncbi	Campylobacter jejuni jejuni 81-176	0.0001744	697	12
PMAR167555 ncbi	Prochlorococcus marinus NATL1A	0.0001747	550	11
DHAF138119 ncbi	Desulfitobacterium hafniense Y51	0.0001840	1575	16
RSPH349102 ncbi	Rhodobacter sphaeroides ATCC 17025	0.0001914	1579	16
SMED366394 ncbi	Sinorhizobium medicae WSM419	0.0001949	1942	17
SGLO343509 ncbi	Sodalis glossinidius morsitans	0.0002301	1961	17
BQUI283165 ncbi	Bartonella quintana Toulouse	0.0002403	717	12
SRUB309807 ncbi	Salinibacter ruber DSM 13855	0.0002775	900	13
FSUC59374 ncbi	Fibrobacter succinogenes succinogenes S85	0.0002944	730	12
LBOR355277 ncbi	Leptospira borgpetersenii serovar Hardjo-bovis JB197	0.0003279	737	12
TROS309801 ncbi	Thermomicrobium roseum DSM 5159	0.0003801	1127	14
TPEN368408 ncbi	Thermofilum pendens Hrk 5	0.0003915	345	9
FJOH376686 ncbi	Flavobacterium johnsoniae UW101	0.0004031	1132	14
MSME246196 ncbi	Mycobacterium smegmatis MC2 155	0.0006864	1422	15
CSAL290398 ncbi	Chromohalobacter salexigens DSM 3043	0.0006996	2093	17
PMAR146891 ncbi	Prochlorococcus marinus AS9601	0.0007040	490	10
NFAR247156 ncbi	Nocardia farcinica IFM 10152	0.0007886	1191	14
MAER449447 ncbi	Microcystis aeruginosa NIES-843	0.0008046	982	13
MSP189918 ncbi	Mycobacterium sp. KMS	0.0008999	1203	14
SERY405948 ncbi	Saccharopolyspora erythraea NRRL 2338	0.0009343	1453	15
PMAR74546 ncbi	Prochlorococcus marinus MIT 9312	0.0009345	505	10
HMAR272569 ncbi	Haloarcula marismortui ATCC 43049	0.0009372	647	11
JSP290400 ncbi	Jannaschia sp. CCS1	0.0009528	1455	15
CBUR360115 ncbi	Coxiella burnetii RSA 331	0.0009672	997	13
MMAG342108 ncbi	Magnetospirillum magneticum AMB-1	0.0010924	1469	15
CBUR227377 ncbi	Coxiella burnetii RSA 493	0.0011454	1011	13
ACAU438753 ncbi	Azorhizobium caulinodans ORS 571	0.0011956	1776	16
CHYD246194 ncbi	Carboxydothermus hydrogenoformans Z-2901	0.0014892	1250	14
BTHE226186 ncbi	Bacteroides thetaiotaomicron VPI-5482	0.0016129	1040	13
SONE211586 ncbi	Shewanella oneidensis MR-1	0.0017294	2207	17
PMEN399739 ncbi	Pseudomonas mendocina ymp	0.0017975	2212	17
CBUR434922 ncbi	Coxiella burnetii Dugway 5J108-111	0.0018739	1053	13
SSP1131	Synechococcus sp. CC9605	0.0020962	700	11
TELO197221 ncbi	Thermosynechococcus elongatus BP-1	0.0022089	874	12
TCRU317025 ncbi	Thiomicrospira crunogena XCL-2	0.0024885	1300	14
PLUT319225 ncbi	Chlorobium luteolum DSM 273	0.0025372	885	12
SSP64471 ncbi	Synechococcus sp. CC9311	0.0026377	716	11
CVES412965 ncbi	Candidatus Vesicomyosocius okutanii HA	0.0033005	732	11
PINT246198	Prevotella intermedia 17	0.0033405	579	10
CBEI290402 ncbi	Clostridium beijerinckii NCIMB 8052	0.0036788	1600	15
CRUT413404 ncbi	Candidatus Ruthia magnifica Cm (Calyptogena magnifica)	0.0045126	755	11
XAUT78245 ncbi	Xanthobacter autotrophicus Py2	0.0047431	1629	15
CHUT269798 ncbi	Cytophaga hutchinsonii ATCC 33406	0.0047640	937	12
ANAE240017	Actinomyces oris MG1	0.0048234	760	11
DRED349161 ncbi	Desulfotomaculum reducens MI-1	0.0050216	1372	14
SELO269084 ncbi	Synechococcus elongatus PCC 6301	0.0050510	942	12
RLEG216596 ncbi	Rhizobium leguminosarum bv. viciae 3841	0.0055020	1960	16
CKOR374847 ncbi	Candidatus Korarchaeum cryptofilum OPF8	0.0055760	354	8
PENT384676 ncbi	Pseudomonas entomophila L48	0.0056665	2366	17
SSP1148 ncbi	Synechocystis sp. PCC 6803	0.0058041	954	12
SMEL266834 ncbi	Sinorhizobium meliloti 1021	0.0058590	1968	16
PMAR167540	Prochlorococcus marinus pastoris MED4ax	0.0066208	482	9
PPUT160488 ncbi	Pseudomonas putida KT2440	0.0066356	2388	17
PSYR223283 ncbi	Pseudomonas syringae pv. tomato str. DC3000	0.0068278	2392	17
SLAC55218	Ruegeria lacuscaerulensis	0.0068339	1405	14
NWIN323098 ncbi	Nitrobacter winogradskyi Nb-255	0.0071894	1178	13
PMAR167542 ncbi	Prochlorococcus marinus MIT 9515	0.0074641	489	9
HMOD498761 ncbi	Heliobacterium modesticaldum Ice1	0.0081919	1191	13
ABAC204669 ncbi	Candidatus Koribacter versatilis Ellin345	0.0086626	1431	14
BFRA295405 ncbi	Bacteroides fragilis YCH46	0.0088019	991	12
PPUT76869 ncbi	Pseudomonas putida GB-1	0.0088713	2429	17
BFRA272559 ncbi	Bacteroides fragilis NCTC 9343	0.0089977	993	12
PPUT351746 ncbi	Pseudomonas putida F1	0.0091237	2433	17
RRUB269796 ncbi	Rhodospirillum rubrum ATCC 11170	0.0093237	1709	15
ASP76114 ncbi	Aromatoleum aromaticum EbN1	0.0095564	1712	15
PSYR205918 ncbi	Pseudomonas syringae pv. syringae B728a	0.0098534	2444	17

Names of the homologs of the genes in the group in each of these orgs

G7305

G7304

G7301

EG12093

EG12092

EG12091

EG12090

EG12089

EG12088

EG12084

EG12083

EG12082

EG11774

EG11773

EG10479

EG10478

EG10477

NSEN222891

BCIC186490

RPRO272947

HPYL85963

RCAN293613

CPRO264201

BAPH372461

BAPH198804

OTSU357244

RFEL315456

BSP107806

CBLO203907

RTYP257363

HACI382638

HPY

CBLO291272

APHA212042

WPIP80849

CCON360104

DSP216389

DSP255470

CCUR360105

RBEL391896

ECAN269484

RBEL336407

WPIP955

HHEP235279

HPYL357544

ACEL351607

SSP387093

WSUC273121

RAKA293614

RRIC392021

FSP106370

RRIC452659

RCON272944

RMAS416276

ERUM254945

DETH243164

ERUM302409

AMAR234826

MAVI243243

MBUR259564

NPHA348780

CHOM360107

MBAR269797

NSP387092

PMAR74547

PARC259536

STRO369723

DRAD243230

SARE391037

MTBCDC

HSP64091

MTBRV

FSP1855

NOCE323261

MBOV233413

MTUB336982

MBOV410289

MTUB419947

NMUL323848

HSAL478009

TACI273075

CFET360106

ADEH290397

SCO

HWAL362976

PCRY335284

SAVE227882

ECHA205920

CPEL335992

PSP56811

TTHE300852

TTHE262724

MCAP243233

GMET269799

RPAL316057

BTRI382640

ACRY349163

GURA351605

NSP35761

AAEO224324

RSP357808

RCAS383372

LINT267671

FALN326424

MABS561007

RPAL316058

LINT189518

RPAL316055

CJEJ195099

TFUS269800

AFER243159

RSPH272943

PMAR167539

MTHE264732

RPAL258594

RSPH349101

HMUK485914

PTOR263820

ELIT314225

CJEJ407148

SFUM335543

BBAC360095

LBIF355278

LBIF456481

RPAL316056

ASP62977

LBOR355276

DGEO319795

MMAZ192952

MGIL350054

TDEN326298

BHEN283166

STHE292459

PMAR167546

MSP164756

CCHL340177

MSP164757

PCAR338963

PMAR93060

MACE188937

MVAN350058

MTHE349307

GSUL243231

CJEJ360109

TVOL273116

BBAC264462

PMAR59920

CJEJ192222

ABUT367737

HAUR316274

CJEJ354242

PMAR167555

DHAF138119

RSPH349102

SMED366394

SGLO343509

BQUI283165

SRUB309807

FSUC59374

LBOR355277

TROS309801

TPEN368408

FJOH376686

MSME246196

CSAL290398

PMAR146891

NFAR247156

MAER449447

MSP189918

SERY405948

PMAR74546

HMAR272569

JSP290400

CBUR360115

MMAG342108

CBUR227377

ACAU438753

CHYD246194

BTHE226186

SONE211586

PMEN399739

CBUR434922

SSP1131

TELO197221

TCRU317025

PLUT319225

SSP64471

CVES412965

PINT246198

CBEI290402

CRUT413404

XAUT78245

CHUT269798

ANAE240017

DRED349161

SELO269084

RLEG216596

CKOR374847

PENT384676

SSP1148

SMEL266834

PMAR167540

PPUT160488

PSYR223283

SLAC55218

NWIN323098

PMAR167542

HMOD498761

ABAC204669

BFRA295405

PPUT76869

BFRA272559

PPUT351746

RRUB269796

ASP76114

PSYR205918

Organism features enriched in list (features available for 188 out of the 199 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	0.0000119	13	92
Arrangment:Pairs	9.356e-10	11	112
Disease:None	0.0005894	30	58
GC_Content_Range4:40-60	0.0014978	57	224
GC_Content_Range4:60-100	0.0000198	67	145
GC_Content_Range7:50-60	0.0013100	22	107
GC_Content_Range7:60-70	0.0001958	60	134
Genome_Size_Range5:0-2	0.0071526	61	155
Genome_Size_Range9:1-2	0.0022685	54	128
Gram_Stain:Gram_Pos	0.0005484	33	150
Motility:Yes	0.0070126	74	267
Optimal_temp.:-	0.0030102	97	257
Optimal_temp.:30-37	0.0071289	1	18
Oxygen_Req:Aerobic	0.0003591	77	185
Oxygen_Req:Facultative	6.270e-15	25	201
Oxygen_Req:Microaerophilic	7.845e-6	15	18
Pathogenic_in:Human	0.0000211	47	213
Pathogenic_in:No	0.0001834	92	226
Salinity:Extreme_halophilic	0.0051012	6	7
Shape:Coccus	5.460e-6	10	82
Shape:Oval	0.0033622	5	5
Shape:Rod	0.0000153	89	347
Shape:Sphere	0.0050344	1	19
Shape:Spiral	3.727e-7	25	34
Temp._range:Mesophilic	0.0091030	143	473
Temp._range:Thermophilic	0.0029824	19	35

ORGANISMS DEPLETED FOR GROUP:

Total number of orgs: 12
Effective number of orgs (counting one per cluster within 468 clusters): 9

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	Pvalue	# genes in tgt genome found in org	# genes in group found in org
PING357804 ncbi	Psychromonas ingrahamii 37	0.0096492	2048	0
SLOI323850 ncbi	Shewanella loihica PV-4	0.0060024	2115	0
SBAL399599 ncbi	Shewanella baltica OS195	0.0022278	2249	0
SBAL402882 ncbi	Shewanella baltica OS185	0.0020799	2258	0
SSP94122 ncbi	Shewanella sp. ANA-3	0.0018114	2276	0
VFIS312309 ncbi	Vibrio fischeri ES114	0.0017161	2283	0
VCHO ncbi	Vibrio cholerae O1 biovar El Tor str. N16961	0.0015039	2300	0
VCHO345073 ncbi	Vibrio cholerae O395	0.0010892	2341	0
VVUL216895 ncbi	Vibrio vulnificus CMCP6	0.0004592	2447	0
VPAR223926 ncbi	Vibrio parahaemolyticus RIMD 2210633	0.0002882	2502	0
VVUL196600 ncbi	Vibrio vulnificus YJ016	0.0002713	2509	0
PPRO298386 ncbi	Photobacterium profundum SS9	0.0001816	2555	0

Organism features enriched in list (features available for 12 out of the 12 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Disease:Cholera	0.0003890	2	2
Disease:Gastroenteritis	0.0016357	3	13
Disease:primary_septicemia	0.0003890	2	2
Disease:wound_infections	0.0003890	2	2
GC_Content_Range4:40-60	0.0001738	11	224
GC_Content_Range7:40-50	3.365e-6	10	117
Genome_Size_Range5:4-6	0.0000210	11	184
Genome_Size_Range9:5-6	0.0037397	6	88
Gram_Stain:Gram_Neg	0.0011059	12	333
Habitat:Aquatic	0.0006634	7	91
Motility:Yes	0.0010998	11	267
Optimal_temp.:20-30	3.488e-6	4	7
Oxygen_Req:Facultative	0.0000546	11	201

PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group

Pathway or complex	# Orgs containing it	# of those orgs also containing candidate	Pearson Coeff
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)	176	93	0.4027

PAIRWISE GENOME CONTEXT SCORE MATRIX:

	G7304	G7301	EG12093	EG12092	EG12091	EG12090	EG12089	EG12088	EG12084	EG12083	EG12082	EG11774	EG11773	EG10479	EG10478	EG10477
G7305	0.999616	0.999473	0.999714	0.999797	0.999644	0.999721	0.999868	0.999857	0.9997	0.999654	0.999658	0.999659	0.99968	0.999927	0.999631	0.9997
G7304		0.999437	0.999426	0.999442	0.999475	0.999326	0.999562	0.999683	0.999877	0.999748	0.999677	0.999506	0.999378	0.99975	0.999974	0.999826
G7301			0.999722	0.999818	0.999708	0.999495	0.999623	0.999654	0.999569	0.999522	0.999511	0.999334	0.999695	0.999584	0.999505	0.999309
EG12093				0.999982	0.999893	0.999882	0.999926	0.999928	0.999895	0.99987	0.999862	0.99984	0.999985	0.999814	0.999448	0.999564
EG12092					0.99994	0.999922	0.999951	0.999954	0.999905	0.999882	0.999874	0.999857	0.999993	0.999892	0.999474	0.999665
EG12091						0.999904	0.999913	0.999907	0.999824	0.99979	0.999782	0.999827	0.99992	0.999781	0.999485	0.999526
EG12090							0.999954	0.999938	0.999853	0.999834	0.999809	0.999837	0.999905	0.999846	0.999338	0.999583
EG12089								0.999994	0.999947	0.999923	0.999907	0.999928	0.99993	0.999957	0.999606	0.999784
EG12088									0.999977	0.999948	0.999933	0.999942	0.99994	0.999968	0.999748	0.999873
EG12084										0.999989	0.999978	0.999944	0.999883	0.999859	0.999908	0.999693
EG12083											1	0.99991	0.999853	0.999783	0.999758	0.999604
EG12082												0.999891	0.999832	0.999782	0.999683	0.999543
EG11774													0.999867	0.999768	0.999518	0.999606
EG11773														0.999831	0.99941	0.999624
EG10479															0.999791	0.999875
EG10478																0.999833
EG10477

PAIRWISE BLAST SCORES:

	G7305	G7304	G7301	EG12093	EG12092	EG12091	EG12090	EG12089	EG12088	EG12084	EG12083	EG12082	EG11774	EG11773	EG10479	EG10478	EG10477
G7305	0.0f0	-	-	-	-	-	-	3.2e-6	-	-	-	-	-	-	1.1e-26	-	-
G7304	-	0.0f0	-	-	-	-	-	-	-	2.6e-31	-	-	-	-	-	0	-
G7301	-	-	0.0f0	-	1.6e-43	-	-	-	-	-	-	-	-	-	-	-	-
EG12093	-	-	-	0.0f0	-	-	-	-	-	-	-	-	-	-	-	-	-
EG12092	-	-	-	-	0.0f0	-	-	-	-	-	-	-	-	-	-	-	-
EG12091	-	-	-	-	-	0.0f0	-	-	-	-	-	-	-	-	-	-	-
EG12090	-	-	-	-	-	-	0.0f0	-	-	-	-	-	-	-	-	-	-
EG12089	4.6e-14	-	-	-	-	-	-	0.0f0	-	-	-	-	-	-	4.1e-13	-	-
EG12088	-	-	-	-	-	-	-	-	0.0f0	-	-	-	-	-	-	-	-
EG12084	-	-	-	-	-	-	-	-	-	0.0f0	-	-	-	-	-	-	-
EG12083	-	-	-	-	-	-	-	-	-	-	0.0f0	-	-	-	-	-	-
EG12082	-	-	-	-	-	-	-	-	-	-	-	0.0f0	-	-	-	-	-
EG11774	-	-	-	-	-	-	-	-	-	-	-	-	0.0f0	-	-	-	-
EG11773	-	-	-	-	-	-	-	-	-	-	-	-	-	0.0f0	-	-	-
EG10479	3.6e-37	-	-	-	-	-	-	4.1e-13	-	-	-	-	-	-	0.0f0	-	-
EG10478	-	0	-	-	-	-	-	-	-	4.9e-35	-	-	-	-	-	0.0f0	-
EG10477	-	-	-	-	-	-	-	-	5.9e-11	-	-	-	-	-	-	-	0.0f0

PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY0-1336 (NADH to fumarate electron transfer) (degree of match pw to cand: 0.647, degree of match cand to pw: 0.647, average score: 0.768)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9997 0.9993 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9998 0.9993 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.1607 0.1156 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0726 0.0489 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.7435 0.3946 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.5049 0.1375 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- PWY0-1347 (NADH to trimethylamine N-oxide electron transfer) (degree of match pw to cand: 0.647, degree of match cand to pw: 0.647, average score: 0.832)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9997 0.9993 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9998 0.9993 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.7874 0.6080 G7023 (torY) G7023-MONOMER (trimethylamine N-oxide reductase III, c-type cytochrome subunit)
             0.4924 0.2992 G7022 (torZ) G7022-MONOMER (trimethylamine N-oxide reductase III, TorZ subunit)
             0.5119 0.3782 EG11814 (torA) TORA-MONOMER (trimethylamine N-oxide reductase, catalytic subunit)
             0.4070 0.2197 EG11815 (torC) EG11815-MONOMER (TorC trimethylamine N-oxide reductase, cytochrome c-type subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- PWY0-1334 (NADH to cytochrome bd oxidase electron transfer) (degree of match pw to cand: 0.647, degree of match cand to pw: 0.647, average score: 0.831)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9997 0.9993 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9998 0.9993 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.3751 0.2097 EG10174 (cydB) CYDB-MONOMER (cytochrome bd-I terminal oxidase subunit II)
             0.6282 0.4110 EG10173 (cydA) CYDA-MONOMER (cytochrome bd-I terminal oxidase subunit I)
             0.6353 0.5033 EG11379 (appB) APPB-MONOMER (cytochrome bd-II terminal oxidase subunit II)
             0.5797 0.4547 EG11380 (appC) APPC-MONOMER (cytochrome bd-II terminal oxidase subunit I)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- HYDROG3-CPLX (hydrogenase 3) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.176, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
             0.9222 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9985 0.9955 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- FERMENTATION-PWY (mixed acid fermentation) (degree of match pw to cand: 0.107, degree of match cand to pw: 0.176, average score: 0.597)
  Genes in pathway or complex:
             0.9506 0.7866 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.9749 0.9191 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.3240 0.2384 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.3688 0.2735 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.3067 0.1084 G6775 (adhP) ADHP-MONOMER (ethanol dehydrogenase)
             0.6739 0.4845 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4296 0.0920 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.5211 0.2180 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.7485 0.5222 G592 (ldhA) DLACTDEHYDROGNAD-MONOMER (D-lactate dehydrogenase)
             0.5619 0.3146 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.7891 0.4926 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8090 0.5964 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.3640 0.0792 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.2409 0.1197 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.9985 0.9955 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9222 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.1607 0.1156 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0726 0.0489 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.7435 0.3946 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.5049 0.1375 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
             0.9436 0.5506 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.3399 0.1645 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.8440 0.6865 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- FHLMULTI-CPLX (formate hydrogenlyase complex) (degree of match pw to cand: 0.429, degree of match cand to pw: 0.176, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.9985 0.9955 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9222 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- ANARESP1-PWY (respiration (anaerobic)) (degree of match pw to cand: 0.111, degree of match cand to pw: 0.176, average score: 0.592)
  Genes in pathway or complex:
             0.4296 0.0920 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.5211 0.2180 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.2768 0.0429 EG10543 (lpd) E3-MONOMER (E3 monomer)
             0.1071 0.0381 EG10025 (aceF) ACEF-LIPOATE (AceF-lipoate)
             0.3426 0.1647 EG10024 (aceE) E1P-MONOMER (subunit of E1p component of pyruvate dehydrogenase complex)
             0.9436 0.5506 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.3399 0.1645 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.8440 0.6865 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.2409 0.1197 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
             0.3640 0.0792 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.5619 0.3146 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.7891 0.4926 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8090 0.5964 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.3240 0.2384 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.3688 0.2735 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.9427 0.7727 EG10258 (eno) ENOLASE-MONOMER (Eno)
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.9985 0.9955 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9222 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.1607 0.1156 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0726 0.0489 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.7435 0.3946 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.5049 0.1375 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- PWY0-1348 (NADH to dimethyl sulfoxide electron transfer) (degree of match pw to cand: 0.687, degree of match cand to pw: 0.647, average score: 0.773)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9997 0.9993 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9998 0.9993 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.3529 0.1367 EG10234 (dmsC) DMSC-MONOMER (dimethyl sulfoxide reductase, chain C)
             0.2446 0.1370 EG10233 (dmsB) DMSB-MONOMER (dimethyl sulfoxide reductase, chain B)
             0.3094 0.1872 EG10232 (dmsA) DMSA-MONOMER (dimethyl sulfoxide reductase, chain A)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- PWY0-1352 (NADH to nitrate electron transfer) (degree of match pw to cand: 0.579, degree of match cand to pw: 0.647, average score: 0.807)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9997 0.9993 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9998 0.9993 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.5748 0.4382 EG10638 (narG) NARG-MONOMER (nitrate reductase A, α subunit)
             0.6650 0.3918 EG10639 (narH) NARH-MONOMER (nitrate reductase A, β subunit)
             0.3856 0.2241 EG10640 (narI) NARI-MONOMER (nitrate reductase A, γ subunit)
             0.3793 0.2312 EG10644 (narV) NARV-MONOMER (nitrate reductase Z, γ subunit)
             0.6550 0.5826 EG10648 (narZ) NARZ-MONOMER (nitrate reductase Z, α subunit)
             0.7467 0.5240 EG10647 (narY) NARY-MONOMER (nitrate reductase Z, β subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- CPLX0-3362 (connecting fragment of NADH dehydrogenase I) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.176, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- CPLX0-250 (hydrogenase 4) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.176, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)
             0.9994 0.9989 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
             0.9550 0.8851 G7302 (hyfE) MONOMER0-142 (hydrogenase 4, component E)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
             0.9977 0.9949 G7300 (hyfC) MONOMER0-154 (hydrogenase 4, component C)
             0.9983 0.9942 EG11282 (hyfB) MONOMER0-153 (hydrogenase 4, component B)
             0.9527 0.8916 EG11150 (hyfA) MONOMER0-152 (hydrogenase 4, component A)
             0.9996 0.9989 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)

- NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I) (degree of match pw to cand: 0.846, degree of match cand to pw: 0.647, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9997 0.9993 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9998 0.9993 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

- PWY0-1335 (NADH to cytochrome bo oxidase electron transfer) (degree of match pw to cand: 0.647, degree of match cand to pw: 0.647, average score: 0.764)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
   *in cand* 0.9999 0.9996 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
   *in cand* 0.9999 0.9996 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9997 0.9993 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
   *in cand* 0.9998 0.9993 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9998 0.9993 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9998 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9998 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9998 0.9995 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
   *in cand* 0.9998 0.9993 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9999 0.9997 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9998 0.9995 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.3929 0.0893 EG10180 (cyoC) CYOC-MONOMER (cytochrome bo terminal oxidase subunit III)
             0.2618 0.0921 EG10179 (cyoB) CYOB-MONOMER (cytochrome bo terminal oxidase subunit I)
             0.5590 0.1152 EG10178 (cyoA) CYOA-MONOMER (cytochrome bo terminal oxidase subunit II)
             0.2154 0.0440 EG10181 (cyoD) CYOD-MONOMER (cytochrome bo terminal oxidase subunit IV)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9996 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9996 0.9993 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9995 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)

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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11773 EG11774 EG12082 EG12083 EG12084 EG12088 EG12089 EG12090 EG12091 EG12092 EG12093 (centered at EG12089)
G7301 G7304 G7305 (centered at G7304)
EG10477 EG10478 EG10479 (centered at EG10478)

ORG:REPLICON:CIRC?\GENE	IN REF LIST	G7305	G7304	G7301	EG12093	EG12092	EG12091	EG12090	EG12089	EG12088	EG12084	EG12083	EG12082	EG11774	EG11773	EG10479	EG10478	EG10477
		219/623	275/623	318/623	382/623	381/623	243/623	245/623	347/623	391/623	388/623	380/623	379/623	339/623	336/623	333/623	281/623	299/623
AAEO224324:0:T	yes	-	510	-	569	515	566	565	512	511	510	509	570	0	516	-	510	562
AAUR290340:2:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
AAVE397945:0:T	yes	-	-	1995	13	11	-	9	8	7	3	1	0	5	12	8	-	7
ABAC204669:0:T	yes	-	26	-	16	7	6	20	558	21	26	2085	0	24	8	4	26	-
ABAU360910:0:T	yes	-	-	957	13	11	10	9	8	7	3	1	0	5	12	-	-	-
ABOR393595:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
ABUT367737:0:T	yes	-	11	2	0	2	-	4	5	6	11	12	13	9	-	5	11	-
ACAU438753:0:T	yes	9	2723	2727	14	12	-	10	9	8	3	1	0	5	13	9	2723	2726
ACEL351607:0:T	yes	8	3	11	13	11	10	-	8	7	3	1	0	5	12	8	3	463
ACRY349163:8:T	yes	0	467	3	174	176	177	178	179	180	184	185	186	182	175	179	467	464
ADEH290397:0:T	yes	3283	3282	0	2	0	3821	3822	2170	2181	2180	2175	2176	3823	1	3283	3282	3279
AEHR187272:0:T	yes	-	-	133	0	2	-	4	5	6	10	12	13	8	1	-	-	6
AFER243159:0:T	yes	-	459	11	13	11	10	9	8	7	3	1	0	5	12	8	459	462
AFUL224325:0:T	yes	-	-	-	-	-	-	-	-	0	-	-	-	-	-	-	-	-
AHYD196024:0:T	yes	712	711	2	0	2	3	4	5	6	10	11	12	8	1	712	711	710
AMAR234826:0:T	yes	-	-	-	-	205	206	207	184	137	126	0	1	208	204	184	-	137
AMAR329726:5:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
AMAR329726:9:T	yes	-	-	1967	1884	1967	-	2000	-	1998	3162	1217	0	-	1966	1999	3162	1998
AMET293826:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
ANAE240017:0:T	yes	-	-	-	0	2	3	-	5	6	10	12	13	8	1	5	-	-
AORE350688:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
APER272557:0:T	yes	-	1	-	-	-	-	-	-	0	1	7	-	-	-	-	1	0
APHA212042:0:T	yes	-	281	-	-	3	2	-	347	261	281	81	80	0	4	347	281	261
ASAL382245:5:T	yes	87	88	2	0	2	3	4	5	6	10	11	12	8	1	87	88	89
ASP1667:2:T	yes	-	-	5	7	-	-	-	-	2	-	-	0	-	6	-	-	-
ASP232721:2:T	yes	-	-	1462	13	11	-	9	8	7	3	1	0	5	12	8	-	7
ASP62928:0:T	yes	-	3	-	13	11	10	9	8	7	3	1	0	5	12	-	-	-
ASP62977:0:T	yes	332	327	0	337	335	334	333	332	331	327	326	325	329	336	332	327	331
ASP76114:2:T	yes	-	2116	0	2514	2512	2511	2510	2509	2508	2504	2502	2501	2506	2513	-	2116	2119
AVAR240292:3:T	yes	-	1455	0	408	0	-	-	-	969	1455	113	112	2914	1052	970	1455	-
BABO262698:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BABO262698:1:T	no	8	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
BAMB339670:3:T	no	-	-	-	0	2	3	4	5	6	10	12	13	8	1	5	-	6
BAMB398577:3:T	no	-	-	-	0	2	3	4	5	6	10	12	13	8	1	5	-	6
BAMY326423:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BANT260799:0:T	no	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BANT261594:2:T	no	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BANT568206:2:T	yes	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BANT592021:2:T	no	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BAPH198804:0:T	yes	7	2	-	12	10	9	8	7	6	2	1	0	4	11	7	2	6
BAPH372461:0:T	yes	7	2	-	12	10	9	-	7	6	2	1	0	4	11	7	2	-
BBAC264462:0:T	yes	-	4	740	738	740	741	742	0	743	4	5	744	2	739	-	4	-
BBAC360095:0:T	yes	-	-	0	715	713	-	711	710	709	705	703	702	707	714	710	-	709
BBRO257310:0:T	yes	-	-	0	794	796	797	798	799	800	804	806	807	802	795	-	-	800
BCAN483179:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BCAN483179:1:T	no	8	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
BCEN331271:2:T	no	-	-	-	0	2	3	4	5	6	10	12	13	8	1	5	-	6
BCEN331272:3:T	yes	-	-	-	0	2	3	4	5	6	10	12	13	8	1	5	-	6
BCER226900:1:T	yes	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BCER288681:0:T	no	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BCER315749:1:T	yes	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	7	-
BCER405917:1:T	yes	5	7	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BCER572264:1:T	no	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BCIC186490:0:T	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
BCLA66692:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BFRA272559:1:T	yes	-	7	2	0	2	-	-	5	6	7	8	9	-	-	5	7	6
BFRA295405:0:T	no	-	7	2	0	2	-	-	5	6	7	8	9	-	-	5	7	6
BHAL272558:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BHEN283166:0:T	yes	5	-	686	0	2	-	-	5	6	10	12	13	8	1	5	-	6
BJAP224911:0:F	yes	5	1453	-	0	2	-	4	5	6	12	14	15	8	1	5	1453	1450
BLIC279010:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BMAL243160:1:T	no	-	10	-	0	2	3	4	5	6	10	12	13	8	1	5	-	6
BMAL320388:1:T	no	-	3	-	13	11	10	9	8	7	3	1	0	5	12	-	-	7
BMAL320389:1:T	yes	-	3	-	13	11	10	9	8	7	3	1	0	5	12	-	-	7
BMEL224914:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BMEL224914:1:T	no	5	-	-	0	2	-	-	5	6	10	12	13	8	1	5	-	6
BMEL359391:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BMEL359391:1:T	no	8	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
BOVI236:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BOVI236:1:T	yes	8	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	-
BPAR257311:0:T	no	-	-	0	281	283	284	285	286	287	291	293	294	289	282	-	-	287
BPER257313:0:T	yes	-	-	766	13	11	10	9	8	7	3	1	0	5	12	-	-	7
BPET94624:0:T	yes	-	-	896	13	11	10	9	8	7	3	1	0	5	12	8	-	-
BPSE272560:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	3
BPSE272560:1:T	yes	-	-	-	13	11	10	9	8	7	3	1	0	5	12	-	-	-
BPSE320372:0:T	no	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	3
BPSE320372:1:T	no	-	-	-	13	11	10	9	8	7	3	1	0	5	12	-	-	-
BPSE320373:0:T	no	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	3
BPSE320373:1:T	no	-	-	-	13	11	10	9	8	7	3	1	0	5	12	-	-	-
BPUM315750:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BQUI283165:0:T	yes	-	-	665	13	11	-	-	8	7	3	1	0	5	12	8	-	7
BSP107806:2:T	yes	7	2	-	12	10	9	8	7	6	2	1	0	4	11	7	2	6
BSP36773:2:T	yes	-	-	-	0	2	3	4	5	6	10	12	13	8	1	5	-	6
BSP376:0:T	yes	5	-	-	0	2	-	4	5	6	12	14	15	8	1	5	-	-
BSUB:0:T	yes	-	-	0	-	0	-	-	-	-	-	-	-	-	-	-	-	-
BSUI204722:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BSUI204722:1:T	yes	8	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
BSUI470137:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
BSUI470137:1:T	no	8	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
BTHA271848:0:T	no	-	3	-	-	-	-	-	-	-	-	-	-	-	-	-	3	0
BTHA271848:1:T	no	-	-	-	13	11	10	9	8	7	3	1	0	5	12	8	-	-
BTHE226186:0:T	yes	-	4017	4012	4010	4012	-	-	4015	4016	4017	4018	4019	0	-	4015	4017	4016
BTHU281309:1:T	no	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	-
BTHU412694:1:T	no	-	-	2	0	2	-	3	-	4	5	7	-	-	-	-	-	-
BTRI382640:1:T	yes	5	-	1043	0	2	-	4	5	6	10	12	13	8	1	5	-	6
BVIE269482:7:T	yes	-	-	-	0	2	3	4	5	6	10	12	13	8	1	5	-	6
BWEI315730:4:T	yes	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	-	6
BXEN266265:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0
BXEN266265:1:T	yes	-	1294	-	-	-	-	-	-	-	-	-	-	-	0	-	1294	-
CAULO:0:T	yes	-	-	2	0	2	-	4	5	8	15	18	19	10	1	-	-	-
CBEI290402:0:T	yes	5	7	2	0	2	-	-	5	6	7	9	10	1096	1	5	7	6
CBLO203907:0:T	yes	5	10	-	0	2	3	4	5	6	10	11	12	8	1	5	10	6
CBLO291272:0:T	no	5	10	-	0	2	3	4	5	6	10	11	12	8	1	5	10	6
CBOT36826:1:T	no	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBOT441770:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBOT441771:0:T	no	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBOT441772:1:T	no	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBOT498213:1:T	no	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBOT508765:1:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBOT515621:2:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBOT536232:0:T	no	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CBUR227377:1:T	yes	-	-	153	0	2	3	4	5	6	10	12	13	8	1	-	-	6
CBUR360115:1:T	no	-	-	165	0	2	3	4	5	6	11	13	14	9	1	-	-	6
CBUR434922:2:T	no	-	-	0	150	148	147	146	145	144	139	137	136	141	149	-	-	144
CCHL340177:0:T	yes	-	3	8	10	8	7	6	-	4	3	1	0	-	9	-	3	4
CCON360104:2:T	yes	73	72	10	12	10	9	8	7	6	2	1	0	-	11	73	72	69
CCUR360105:0:T	yes	187	186	2	0	2	3	4	5	6	10	12	13	-	1	187	186	183
CDES477974:0:T	yes	-	3	-	1066	-	-	-	-	-	-	-	-	240	-	-	3	0
CDIF272563:1:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
CFET360106:0:T	yes	0	1	-	38	36	35	34	33	32	28	27	26	-	-	0	1	5
CHOM360107:1:T	yes	-	3	11	13	11	10	9	8	7	3	1	0	-	12	8	3	-
CHUT269798:0:T	yes	-	-	2	0	2	-	4	5	6	10	12	13	8	1	5	-	-
CHYD246194:0:T	yes	-	1063	665	663	665	666	-	668	669	670	672	673	0	-	1065	1063	1067
CJAP155077:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
CJEJ192222:0:T	yes	-	10	2	0	2	3	-	5	6	10	12	13	-	-	5	10	-
CJEJ195099:0:T	no	-	10	2	0	2	3	-	5	6	10	12	13	-	-	5	10	6
CJEJ354242:2:T	yes	-	10	2	0	2	3	-	5	6	10	12	13	-	-	5	10	-
CJEJ360109:0:T	yes	-	10	2	0	2	3	-	5	6	10	12	13	-	-	5	10	-
CJEJ407148:0:T	no	-	10	2	0	2	3	4	5	6	10	12	13	-	-	5	10	-
CKOR374847:0:T	yes	-	0	6	7	-	-	-	-	1	0	-	-	-	-	2	0	1
CMAQ397948:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0	-
CMET456442:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	3
CMIC31964:2:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
CMIC443906:2:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
CPEL335992:0:T	yes	8	-	-	13	11	-	9	8	7	3	1	0	5	12	8	-	7
CPHY357809:0:T	yes	-	3	-	-	-	-	-	-	-	-	-	-	2053	-	4	3	0
CPRO264201:0:F	yes	8	3	11	13	11	10	-	8	7	3	1	0	5	12	8	3	7
CPSY167879:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
CRUT413404:0:T	yes	-	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
CSAL290398:0:T	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
CSP501479:8:F	yes	-	-	0	2068	2070	2071	2073	2075	2076	2088	2090	2091	2083	2069	-	-	-
CSP78:2:T	yes	5	-	-	0	2	3	4	5	7	14	16	17	9	1	-	-	-
CTEP194439:0:T	yes	-	3	8	10	8	-	-	-	4	3	1	0	-	9	-	3	4
CTET212717:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
CVES412965:0:T	yes	-	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
CVIO243365:0:T	yes	-	-	-	326	324	323	322	321	320	316	314	0	318	325	-	-	320
DARO159087:0:T	yes	-	-	-	13	11	10	9	8	7	3	1	0	5	12	8	-	-
DETH243164:0:T	yes	-	800	189	191	189	-	-	186	185	184	182	181	0	190	186	126	803
DGEO319795:1:T	yes	8	3	11	13	11	10	-	8	7	3	1	0	5	-	8	3	7
DHAF138119:0:T	yes	5	541	1606	0	2	-	4	5	6	7	9	10	1400	1	5	541	544
DPSY177439:2:T	yes	0	1	-	282	-	-	-	289	290	291	293	294	1200	284	0	291	4
DRAD243230:3:T	yes	606	612	0	601	603	604	605	606	607	612	614	615	609	-	606	612	607
DRED349161:0:T	yes	382	384	379	377	379	-	-	382	383	384	386	387	0	-	382	384	383
DSHI398580:3:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DSHI398580:5:T	yes	-	-	-	22	20	19	17	15	14	4	1	0	9	21	15	-	-
DSP216389:0:T	yes	-	683	165	167	165	-	163	162	161	160	158	157	0	166	162	134	686
DSP255470:0:T	no	-	855	187	189	187	-	185	184	183	182	180	179	0	188	184	156	858
DVUL882:1:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	1847	1849	1845
ECAN269484:0:T	yes	-	141	-	186	188	189	-	73	138	141	0	1	198	187	73	-	138
ECAR218491:0:T	yes	0	1	4	1786	1788	1789	1790	1791	1792	1796	1797	1798	1794	1787	0	1	5
ECHA205920:0:T	yes	-	-	-	8	6	5	-	136	67	66	225	224	0	7	136	-	-
ECOL199310:0:T	no	456	457	2	0	2	3	4	5	6	10	11	12	8	1	456	457	458
ECOL316407:0:T	no	207	432	203	0	2	3	4	5	6	10	11	12	8	1	431	432	433
ECOL331111:6:T	no	191	416	2	0	2	3	4	5	6	10	11	12	8	1	415	416	417
ECOL362663:0:T	no	376	377	2	0	2	3	4	5	6	10	11	12	8	1	376	377	378
ECOL364106:1:T	no	524	525	2	0	2	3	4	5	6	10	11	12	8	1	524	525	526
ECOL405955:2:T	yes	498	499	2	0	2	3	4	5	6	10	11	12	8	1	498	499	500
ECOL409438:6:T	yes	247	452	243	0	2	3	4	5	6	10	11	12	8	1	451	452	453
ECOL413997:0:T	no	184	383	180	0	2	3	4	5	6	10	11	12	8	1	382	383	384
ECOL439855:4:T	no	197	396	193	0	2	3	4	5	6	10	11	12	8	1	395	396	397
ECOL469008:0:T	no	206	207	210	395	393	392	391	390	389	385	384	383	387	394	2	207	0
ECOL481805:0:T	no	206	207	210	400	398	397	396	395	394	390	389	388	392	399	2	207	0
ECOL585034:0:T	no	190	461	186	0	2	3	4	5	6	10	11	12	8	1	460	461	462
ECOL585035:0:T	no	550	551	2	0	2	3	4	5	6	10	11	12	8	1	550	551	552
ECOL585055:0:T	no	248	468	2	0	2	3	4	5	6	10	11	12	8	1	467	468	469
ECOL585056:2:T	no	189	436	185	0	2	3	4	5	6	10	11	12	8	1	435	436	437
ECOL585057:0:T	no	205	494	201	0	2	3	4	5	6	10	11	12	8	1	493	494	495
ECOL585397:0:T	no	434	435	2	0	2	3	4	5	6	10	11	12	8	1	434	435	436
ECOL83334:0:T	no	197	435	193	0	2	3	4	5	6	10	11	12	8	1	434	435	436
ECOLI:0:T	no	218	217	214	0	2	3	4	5	6	10	11	12	8	1	452	453	454
ECOO157:0:T	no	199	440	195	0	2	3	4	5	6	10	11	12	8	1	439	440	441
EFER585054:1:T	yes	331	332	335	536	534	533	532	531	530	526	525	524	528	535	2	332	0
ELIT314225:0:T	yes	5	15	2	0	2	3	4	5	6	15	18	19	10	1	5	-	-
ERUM254945:0:T	yes	-	-	195	193	195	196	-	72	139	156	0	1	198	194	72	-	-
ERUM302409:0:T	no	-	-	190	188	190	191	-	73	139	152	0	1	193	189	73	-	-
ESP42895:1:T	yes	385	386	2	0	2	3	4	5	6	10	11	12	8	1	385	386	387
FALN326424:0:T	yes	-	3	11	13	11	10	9	8	7	3	1	0	5	12	8	3	-
FJOH376686:0:T	yes	-	10	2	0	2	3	4	5	6	10	12	13	8	1	-	10	-
FMAG334413:1:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
FNOD381764:0:T	yes	-	-	-	-	-	-	-	-	-	753	-	-	0	-	-	-	756
FPHI484022:1:T	yes	-	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
FRANT:0:T	no	-	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
FSP106370:0:T	yes	8	3	11	13	11	10	9	8	7	3	1	0	5	12	8	3	-
FSP1855:0:T	yes	5	10	2	0	2	3	-	5	6	10	12	13	8	1	5	10	6
FSUC59374:0:T	yes	-	-	886	884	675	-	673	672	671	891	665	0	669	-	-	667	890
FTUL351581:0:T	no	-	-	-	0	2	-	-	5	6	10	12	13	8	1	5	-	6
FTUL393011:0:T	no	-	-	-	0	2	-	-	5	6	10	12	13	8	1	5	-	6
FTUL393115:0:T	yes	-	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
FTUL401614:0:T	yes	-	-	-	0	2	-	-	5	6	10	12	13	8	1	5	-	6
FTUL418136:0:T	no	-	-	-	13	11	-	-	8	7	3	1	0	5	12	8	-	7
FTUL458234:0:T	no	-	-	-	0	2	-	-	5	6	10	12	13	8	1	5	-	6
GBET391165:0:T	yes	-	1097	-	0	2	-	4	5	6	10	12	13	8	1	5	-	6
GFOR411154:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
GKAU235909:1:T	yes	5	-	2	0	2	-	4	5	7	8	10	11	-	-	5	8	-
GMET269799:1:T	yes	213	1	16	3195	3197	15	13	11	9	1	1	0	5	19	213	1	2454
GSUL243231:0:T	yes	-	3082	1988	5	3	3070	3071	3072	3074	3082	3082	3083	3079	3068	0	3082	391
GTHE420246:1:T	yes	5	-	2	0	2	-	4	5	6	7	9	10	-	-	5	7	-
GURA351605:0:T	yes	3896	484	6	3891	3893	7	8	9	11	19	19	20	15	0	565	484	570
GVIO251221:0:T	yes	-	2178	0	2934	0	-	-	-	1381	2178	535	534	-	2345	438	2178	-
HACI382638:1:T	yes	5	10	2	0	2	3	4	5	6	10	12	13	-	-	5	10	6
HARS204773:0:T	yes	-	-	1129	0	2	3	4	5	6	10	12	13	8	1	-	-	-
HAUR316274:2:T	yes	1583	0	-	1578	1580	1581	1582	1583	3371	1447	3367	1444	1449	1579	1583	3369	-
HBUT415426:0:T	yes	-	0	-	-	6	-	-	-	-	-	-	-	-	-	2	0	-
HCHE349521:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
HHAL349124:0:T	yes	-	-	2	0	2	-	4	5	6	10	12	13	8	1	-	-	6
HHEP235279:0:T	yes	-	10	2	0	2	3	4	5	6	10	12	13	-	1	5	10	6
HMAR272569:8:T	yes	4	516	-	10	8	-	-	-	3	2	1	0	-	9	4	516	-
HMOD498761:0:T	yes	-	1247	1252	1254	1252	-	1250	-	1248	1247	1245	1244	0	1253	-	1247	1248
HMUK485914:1:T	yes	1738	0	2696	1744	1742	1741	-	-	1737	1736	1735	1734	-	-	1738	0	-
HNEP81032:0:T	yes	11	-	-	16	14	-	12	11	10	3	1	0	7	15	11	-	-
HPY:0:T	no	8	3	11	13	11	10	9	8	7	3	1	0	-	12	8	-	7
HPYL357544:1:T	yes	8	3	11	13	11	10	9	8	7	3	1	0	-	-	8	-	7
HPYL85963:0:T	no	8	3	11	13	11	10	9	8	7	3	1	0	-	12	8	3	7
HSAL478009:4:T	yes	4	2	-	10	8	7	-	-	3	2	1	0	-	9	4	2	-
HSP64091:2:T	no	4	2	-	10	8	7	-	-	3	2	1	0	-	9	4	2	-
HWAL362976:1:T	yes	4	2	-	10	8	7	-	-	3	2	1	0	-	9	4	2	-
IHOS453591:0:T	yes	-	0	-	-	4	-	-	-	612	0	-	-	-	-	613	0	-
ILOI283942:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
JSP290400:1:T	yes	33	-	2576	42	40	39	36	33	31	19	16	0	25	41	33	-	31
JSP375286:0:T	yes	-	-	1808	13	11	10	9	8	7	3	1	0	5	12	-	-	-
KPNE272620:2:T	yes	403	404	2	0	2	3	4	5	6	10	11	12	8	1	403	404	405
KRAD266940:2:F	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
LBIF355278:2:T	yes	2016	3	9	11	9	-	-	2016	6	3	1	0	5	10	2016	3	-
LBIF456481:2:T	no	2088	3	9	11	9	-	-	2088	6	3	1	0	5	10	2088	3	-
LBOR355276:1:T	yes	336	-	2	0	2	3	-	336	5	8	10	11	6	1	336	-	-
LBOR355277:1:T	no	-	-	330	332	330	329	-	0	327	324	322	321	326	331	0	-	-
LCHO395495:0:T	yes	8	3	-	13	11	10	9	8	7	3	1	0	5	12	8	3	-
LINN272626:1:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
LINT189518:1:T	yes	-	-	730	728	730	731	-	0	733	736	738	739	734	729	0	736	733
LINT267671:1:T	no	-	-	2561	2563	2561	2560	-	0	2558	2555	2553	2552	2557	2562	0	2555	2558
LMON169963:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
LMON265669:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
LPNE272624:0:T	no	-	-	-	0	2	3	-	5	6	10	12	13	8	1	-	-	6
LPNE297245:1:F	no	-	-	-	0	2	3	-	5	6	10	12	13	8	1	-	-	6
LPNE297246:1:F	yes	-	-	-	0	2	3	-	5	6	10	12	13	8	1	-	-	6
LPNE400673:0:T	no	-	-	-	0	2	3	-	5	6	10	12	13	8	1	-	-	6
LSPH444177:1:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
LWEL386043:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MABS561007:1:T	yes	8	3	11	13	11	10	-	8	7	3	1	0	5	12	-	3	7
MACE188937:0:T	yes	-	2803	3000	11	9	-	-	-	4	3	1	0	-	10	5	2803	2800
MAEO419665:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	64	627
MAER449447:0:T	yes	-	5155	3140	5529	3140	-	5578	-	5580	5155	1069	1068	0	4141	5579	5155	-
MAQU351348:2:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
MAVI243243:0:T	yes	8	1064	11	13	11	10	-	8	7	3	1	0	5	12	8	1064	1067
MBAR269797:1:T	yes	-	0	3191	3189	3191	3192	-	3195	3196	3197	3199	3200	-	3190	3195	0	3
MBOV233413:0:T	no	3123	3	3126	3128	3126	3125	-	3123	3122	3118	3116	3115	3120	-	3123	3	0
MBOV410289:0:T	no	3079	3	3082	3084	3082	3081	-	3079	3078	3074	3072	3071	3076	-	3079	3	0
MBUR259564:0:T	yes	-	1079	1075	1073	0	1076	-	-	1078	1079	1081	1082	-	1074	1077	1079	1078
MCAP243233:0:T	yes	204	0	201	199	201	202	203	204	205	209	210	211	207	200	204	0	3
MEXT419610:0:T	yes	706	-	4244	701	703	-	705	706	707	711	713	714	709	702	0	-	707
MFLA265072:0:T	yes	-	1473	0	1463	1465	-	1467	1468	1469	1473	1475	1476	1471	1464	-	-	-
MGIL350054:3:T	yes	8	3	11	13	11	10	-	8	7	3	1	0	5	12	8	3	-
MHUN323259:0:T	yes	-	1288	448	-	-	-	-	-	-	-	-	-	0	-	453	452	526
MJAN243232:2:T	yes	-	527	-	-	-	-	-	-	-	-	-	-	-	-	0	527	-
MKAN190192:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	5
MLAB410358:0:T	yes	652	0	-	-	-	-	-	-	-	-	-	-	-	-	652	0	1
MLOT266835:2:T	yes	5	-	-	0	2	-	-	5	6	11	13	14	9	1	5	-	6
MMAG342108:0:T	yes	2572	0	-	2567	2569	2570	2571	2572	2573	2577	2579	2580	2575	2568	-	0	3
MMAR267377:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	313	308
MMAR368407:0:T	yes	-	1	-	-	-	-	-	-	-	-	-	-	-	-	0	1	4
MMAR394221:0:T	yes	8	-	-	13	11	-	9	8	7	3	1	0	5	12	8	-	-
MMAR402880:1:T	yes	-	316	-	-	-	-	-	-	-	-	-	-	-	-	-	0	5
MMAR426368:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	310	305
MMAR444158:0:T	yes	-	313	-	-	-	-	-	-	-	-	-	-	-	-	-	0	5
MMAZ192952:0:T	yes	-	1292	1452	1450	1452	-	-	-	1457	1458	1460	1461	-	1451	1456	3	0
MPET420662:1:T	yes	-	-	-	13	11	10	-	8	7	3	1	0	5	12	8	-	-
MSED399549:0:T	yes	-	464	-	-	-	-	-	466	465	464	-	-	-	-	466	464	0
MSME246196:0:T	yes	5	10	2	0	2	3	-	5	6	10	12	13	8	1	5	10	-
MSP164756:1:T	no	8	13	2	0	2	6	-	8	9	13	15	16	11	1	8	13	-
MSP164757:0:T	no	8	13	2	0	2	6	-	8	9	13	15	2956	11	1	8	13	-
MSP189918:2:T	yes	8	13	2	0	2	6	-	8	9	13	-	15	11	1	8	13	-
MSP266779:3:T	yes	167	-	0	172	170	-	-	167	166	162	160	159	164	171	167	-	166
MSP400668:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
MSP409:2:T	yes	8	-	-	13	11	-	9	8	7	3	1	0	5	12	8	-	7
MSTA339860:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	-
MTBCDC:0:T	no	3301	3296	3304	3306	3304	3303	-	3301	3300	3296	3294	3293	3298	-	3301	3296	0
MTBRV:0:T	no	3101	3	3104	3106	3104	3103	-	3101	3100	3096	3094	3093	3098	-	3101	3	0
MTHE187420:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	311	-	-	0	-
MTHE264732:0:T	yes	1182	1183	1184	10	8	-	6	5	4	3	1	0	895	9	1182	1183	1187
MTHE349307:0:T	yes	-	2	-	10	8	-	-	-	3	2	1	0	-	9	4	2	-
MTUB336982:0:T	no	3071	3	3074	3076	3074	3073	-	3071	3070	3066	3064	3063	3068	-	3071	3	0
MTUB419947:0:T	yes	3201	3	3204	3206	3204	3203	-	3201	3200	3196	3194	3193	3198	-	3201	3	0
MVAN350058:0:T	yes	5	10	2	0	2	3	-	5	6	10	12	13	8	1	5	10	-
MXAN246197:0:T	yes	-	-	2	0	2	3	-	1593	1594	1595	1599	1600	5	1	-	-	-
NARO279238:0:T	yes	5	-	-	0	2	-	4	5	6	13	15	16	8	1	5	-	-
NEUR228410:0:T	yes	-	-	2	0	2	3	4	5	6	10	12	13	8	1	-	-	-
NEUT335283:2:T	yes	-	-	771	13	11	10	9	8	7	3	1	0	5	12	-	-	-
NFAR247156:2:T	yes	5	9	2	0	2	3	-	5	5	9	11	12	7	1	-	9	-
NGON242231:0:T	yes	-	-	-	0	3	4	5	6	7	11	13	14	9	1	-	-	-
NHAM323097:2:T	yes	1162	-	0	1157	1159	-	1161	1162	1163	155	1170	1171	1165	1158	1162	-	-
NMEN122586:0:T	no	-	-	-	18	16	13	12	10	9	3	1	0	5	17	-	-	-
NMEN122587:0:T	yes	-	-	-	2133	0	3	4	6	7	14	16	17	12	2134	-	-	-
NMEN272831:0:T	no	-	-	-	16	14	11	10	9	8	3	1	0	5	15	-	-	-
NMEN374833:0:T	no	-	-	-	0	4	-	8	9	10	15	17	18	13	1	-	-	-
NMUL323848:3:T	yes	7	2	576	12	10	9	8	7	6	2	1	0	4	11	7	2	6
NOCE323261:1:T	yes	631	636	0	626	628	629	630	631	632	636	637	638	634	627	631	636	632
NPHA348780:2:T	yes	4	2	-	11	9	8	-	4	3	2	1	0	-	10	4	2	-
NSEN222891:0:T	yes	775	531	-	652	0	-	-	775	38	531	400	398	673	651	775	531	38
NSP103690:6:T	yes	-	3160	3765	4705	3765	-	-	-	0	3160	3650	3651	532	126	1	3160	-
NSP35761:1:T	yes	8	3944	11	13	11	10	-	8	7	3	1	0	5	12	8	3944	3947
NSP387092:0:T	yes	-	442	12	14	12	11	10	9	8	3	1	0	-	13	9	442	445
NWIN323098:0:T	yes	5	-	787	0	2	-	4	5	6	11	13	14	8	1	5	-	-
OANT439375:4:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
OANT439375:5:T	yes	5	-	-	0	2	-	-	5	6	10	13	14	8	1	5	-	6
OCAR504832:0:T	yes	732	-	0	737	735	-	733	732	731	727	724	723	729	736	732	-	-
OIHE221109:0:T	yes	-	-	0	-	0	-	-	-	-	-	-	-	-	-	-	-	-
OTSU357244:0:F	yes	290	3	-	-	293	-	291	290	289	3	1	0	5	294	290	-	289
PABY272844:0:T	yes	0	1	4	-	-	-	-	-	-	-	-	-	-	-	0	1	2
PACN267747:0:T	yes	5	-	-	0	2	3	-	5	6	10	12	13	8	1	-	-	-
PAER178306:0:T	yes	-	-	-	-	-	-	-	-	0	-	-	-	-	-	-	-	-
PAER208963:0:T	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
PAER208964:0:T	no	7	2	10	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PARC259536:0:T	yes	7	2	10	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PARS340102:0:T	yes	-	0	-	-	-	-	-	-	3	-	-	-	-	-	-	0	3
PCAR338963:0:T	yes	-	1	9	11	9	8	7	6	5	1	1	0	3	10	6	1	5
PCRY335284:1:T	yes	7	2	10	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PDIS435591:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
PENT384676:0:T	yes	7	2	42	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PFLU205922:0:T	yes	7	2	10	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PFLU216595:1:T	yes	7	2	10	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PFLU220664:0:T	yes	1286	1281	0	1291	1289	1288	1287	1286	1285	1281	1280	-	1283	1290	1286	1281	1285
PFUR186497:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	2	0	1
PHAL326442:1:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PHOR70601:0:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	3	0	2
PINT246198:0:T	yes	-	7	-	0	-	3	-	5	6	7	8	9	-	-	-	7	6
PISL384616:0:T	yes	-	3	-	-	-	-	-	-	0	-	-	-	-	-	-	3	-
PLUM243265:0:F	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
PLUT319225:0:T	yes	-	3	8	10	8	7	-	-	4	3	1	0	-	9	-	3	4
PMAR146891:0:T	yes	-	-	-	324	0	-	-	-	12	24	150	151	-	1	11	24	12
PMAR167539:0:T	yes	-	25	0	272	0	-	-	-	12	25	155	156	-	1	11	25	12
PMAR167540:0:T	yes	-	-	-	296	0	-	-	-	11	23	144	145	-	1	10	23	-
PMAR167542:0:T	yes	-	-	-	337	0	-	-	-	12	25	151	152	-	1	11	25	-
PMAR167546:0:T	yes	-	24	-	289	0	-	-	-	12	24	148	149	-	1	11	24	12
PMAR167555:0:T	yes	11	26	-	-	0	-	10	-	12	26	155	156	-	1	11	26	-
PMAR59920:0:T	no	11	25	-	261	0	-	-	-	12	25	147	148	-	1	11	25	-
PMAR74546:0:T	yes	-	-	-	291	0	-	-	-	11	23	146	147	-	1	10	23	11
PMAR74547:0:T	yes	-	719	678	0	678	686	687	-	689	719	559	560	-	679	688	719	689
PMAR93060:0:T	yes	-	24	-	358	0	-	-	-	12	24	153	154	-	1	11	24	12
PMEN399739:0:T	yes	1001	996	0	1006	1004	1003	1002	1001	1000	996	995	994	998	1005	1001	996	1000
PMOB403833:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	170
PNAP365044:8:T	yes	-	-	100	13	11	-	9	8	7	3	1	0	5	12	-	-	-
PPUT160488:0:T	no	1882	1877	0	1887	1885	1884	1883	1882	1881	1877	1876	1875	1879	1886	1882	1877	1881
PPUT351746:0:T	yes	5	10	1763	0	2	3	4	5	6	10	11	12	8	1	5	10	6
PPUT76869:0:T	no	1851	1846	0	1856	1854	1853	1852	1851	1850	1846	1845	1844	1848	1855	1851	1846	1850
PRUM264731:0:T	yes	-	7	-	0	-	-	4	5	6	7	8	9	-	-	-	7	6
PSP296591:2:T	yes	2324	3	-	2319	2321	-	2323	2324	2325	2329	2331	2332	2327	2320	-	3	0
PSP312153:0:T	yes	5	-	-	0	2	-	4	5	6	10	12	13	8	1	5	-	-
PSP56811:2:T	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
PSTU379731:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
PSYR205918:0:T	yes	7	2	57	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PSYR223283:2:T	yes	7	2	105	12	10	9	8	7	6	2	1	0	4	11	7	2	6
PTHE370438:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
PTOR263820:0:T	yes	-	-	107	593	208	-	590	-	588	587	585	584	-	-	-	587	0
RAKA293614:0:F	yes	985	-	-	580	981	980	-	985	987	328	332	333	0	982	985	-	987
RBEL336407:0:T	yes	16	313	-	708	0	-	-	16	15	313	316	317	1124	1	16	313	15
RBEL391896:0:F	no	1146	838	-	690	1164	-	-	1146	1147	838	835	834	0	1163	1146	838	1147
RCAN293613:0:F	yes	893	626	-	351	888	887	-	893	895	626	623	622	0	889	893	626	895
RCAS383372:0:T	yes	-	0	448	2041	772	2044	2045	2046	2047	0	765	764	2050	2042	2046	0	2047
RCON272944:0:T	no	1103	332	-	657	1100	-	-	1103	1104	332	334	335	0	1101	1103	-	1104
RDEN375451:4:T	yes	7	-	-	0	2	3	5	7	8	19	23	24	14	1	7	-	-
RETL347834:5:T	yes	11	2116	-	2112	14	2107	2106	2121	2122	2116	2114	0	2118	2111	11	2116	-
REUT264198:3:T	yes	-	-	712	13	11	10	9	8	7	3	1	0	5	12	8	-	-
REUT381666:2:T	yes	-	1106	791	13	11	10	9	8	7	3	1	0	5	12	8	1106	1103
RFEL315456:2:T	yes	715	0	-	301	712	711	-	715	716	0	2	3	632	713	715	0	716
RFER338969:1:T	yes	-	1795	-	13	11	-	-	8	7	3	1	0	5	12	1597	1795	1798
RLEG216596:4:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	3
RLEG216596:6:T	yes	340	-	0	345	343	-	341	340	339	334	332	331	336	344	340	-	-
RMAS416276:1:T	yes	794	261	-	505	791	790	-	794	795	261	263	264	0	792	-	-	795
RMET266264:1:T	yes	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	0	3
RMET266264:2:T	yes	-	-	-	13	11	10	9	8	7	3	1	0	5	12	-	-	-
RPAL258594:0:T	yes	151	1484	0	146	148	1477	1478	1479	1480	1484	1485	1486	1482	1475	1479	1484	1480
RPAL316055:0:T	yes	1560	3	760	1565	1563	759	758	757	756	752	751	750	754	761	757	752	0
RPAL316056:0:T	yes	2162	2163	2166	2	0	1648	1649	1650	1651	1655	1656	1657	1653	1646	2162	2163	2167
RPAL316057:0:T	yes	2218	3204	0	2213	2215	665	664	663	662	658	657	656	660	667	2218	3204	3207
RPAL316058:0:T	yes	2458	1131	0	2463	2461	1223	1222	1221	1220	1216	1215	1214	1218	1225	1221	1131	1128
RPOM246200:1:T	yes	-	-	131	0	2	3	4	7	9	19	22	23	14	1	7	-	-
RPRO272947:0:T	yes	665	235	-	418	662	-	660	665	666	235	237	238	0	663	665	235	666
RRIC392021:0:F	no	1062	334	-	653	1059	-	-	1062	1063	334	336	337	0	1060	1062	-	1063
RRIC452659:0:T	yes	1091	345	-	675	1088	-	-	1091	1092	345	347	348	0	1089	1091	-	1092
RRUB269796:1:T	yes	4	2	0	1249	1247	-	-	1244	1243	1239	1237	1236	1241	1248	4	2	3
RSAL288705:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
RSOL267608:1:T	yes	-	-	-	0	2	3	4	5	6	10	12	13	8	1	-	-	-
RSP101510:3:F	yes	-	3	11	13	11	10	-	8	7	3	1	0	5	12	8	3	-
RSP357808:0:T	yes	-	1564	0	127	885	130	883	132	133	1564	878	877	135	128	132	1564	133
RSPH272943:3:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
RSPH272943:4:T	yes	603	598	-	2	0	605	604	603	602	598	597	596	600	1	603	598	602
RSPH349101:1:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
RSPH349101:2:T	no	562	557	-	2	0	564	563	562	561	557	556	555	559	566	562	557	561
RSPH349102:4:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
RSPH349102:5:T	yes	7	2	-	300	302	9	8	7	6	2	1	0	4	11	7	2	-
RTYP257363:0:T	no	759	322	-	504	756	-	-	759	760	322	324	325	0	757	759	322	760
RXYL266117:0:T	yes	-	1517	1513	1511	1513	-	-	1075	1516	1517	1519	1520	-	0	-	1517	1516
SACI330779:0:T	yes	-	2	-	-	-	-	-	0	-	2	-	-	-	-	0	2	-
SACI56780:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
SALA317655:1:T	yes	5	-	-	0	2	-	4	5	6	12	14	15	9	1	5	-	-
SARE391037:0:T	yes	3881	3886	3878	3876	3878	3879	3880	3881	0	3886	3888	3889	3884	3877	3881	4129	-
SAUR158878:1:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR158879:1:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR196620:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR273036:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR282458:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR282459:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR359786:1:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR359787:1:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR367830:3:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR418127:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR426430:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR93061:0:F	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAUR93062:1:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SAVE227882:1:F	yes	170	0	173	175	173	172	171	170	169	165	163	162	167	174	170	165	209
SBOY300268:1:T	yes	190	462	2	0	2	3	4	5	6	10	11	12	8	1	463	462	461
SCO:2:F	yes	1196	0	1199	1201	1199	1198	1197	1196	1195	1191	1189	1188	1193	1200	1196	1191	1228
SDYS300267:1:T	yes	413	414	2	0	2	3	4	5	6	10	11	12	8	1	413	414	415
SELO269084:0:T	yes	-	-	2052	24	2052	92	-	-	95	2282	255	256	1140	0	94	2282	-
SENT209261:0:T	no	2101	2102	10	12	10	9	8	7	6	2	1	0	4	11	2101	2102	2103
SENT220341:0:T	no	402	403	2	0	2	3	4	5	6	10	11	12	8	1	402	403	404
SENT295319:0:T	no	2083	2084	10	12	10	9	8	7	6	2	1	0	4	11	2083	2084	2085
SENT321314:2:T	no	477	478	2	0	2	3	4	5	6	10	11	12	8	1	477	478	479
SENT454169:2:T	no	456	457	2	0	2	3	4	5	6	10	11	12	8	1	456	457	458
SEPI176279:1:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SEPI176280:0:T	no	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SERY405948:0:T	yes	-	10	2	0	2	3	-	5	6	10	12	13	8	1	5	10	6
SFLE198214:0:T	yes	175	382	170	0	2	3	4	5	6	10	11	12	8	1	175	382	383
SFLE373384:0:T	no	185	423	182	0	2	3	4	5	6	10	11	12	8	1	424	423	422
SFUM335543:0:T	yes	1720	1722	1717	1715	3	1718	1719	1720	1721	1722	1722	1723	1735	-	0	1722	1721
SGLO343509:3:T	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
SHAE279808:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SHAL458817:0:T	yes	-	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-
SHIGELLA:0:T	no	168	390	165	0	2	3	4	5	6	10	11	12	8	1	168	390	391
SLAC55218:1:F	yes	1110	-	0	1104	1106	1107	1108	1110	1111	1119	1123	1124	1116	1105	1110	-	-
SMAR399550:0:T	yes	426	425	-	-	-	-	-	0	-	-	-	-	-	-	426	425	424
SMED366394:2:T	yes	-	6	-	10	-	15	16	1	0	6	8	-	4	11	-	6	0
SMED366394:3:T	yes	10	-	1893	-	13	-	-	-	-	-	-	0	-	-	10	-	-
SMEL266834:0:T	yes	-	6	-	10	-	15	16	1	0	6	8	-	4	11	-	6	-
SMEL266834:2:T	yes	10	-	1675	-	13	-	-	-	-	-	-	0	-	-	10	-	-
SONE211586:1:T	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
SPEA398579:0:T	no	-	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-
SPRO399741:1:T	yes	0	1	876	874	876	877	878	879	880	884	885	886	882	875	0	1	2
SRUB309807:1:T	yes	-	-	1278	1036	1033	-	1031	103	2342	3	1	0	5	1034	103	-	2342
SSAP342451:2:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SSED425104:0:T	yes	-	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-
SSOL273057:0:T	yes	-	0	-	-	-	-	-	2	1	0	-	-	-	-	2	0	655
SSON300269:1:T	yes	227	512	223	0	2	3	4	5	6	10	11	12	8	1	511	512	513
SSP1131:0:T	yes	-	2227	-	407	2195	-	-	-	2207	2227	1	0	-	2196	2206	2227	2207
SSP1148:0:T	yes	-	-	-	0	2455	-	2811	-	2813	1232	1584	1583	1392	1950	2812	1232	2813
SSP292414:2:T	yes	13	-	814	19	17	16	15	13	12	3	1	0	7	18	13	-	-
SSP321327:0:T	yes	-	-	1568	695	1568	836	-	-	1	3	1187	1186	-	1110	0	3	-
SSP321332:0:T	yes	-	-	0	1330	0	1144	-	-	741	743	2167	2166	-	183	740	743	-
SSP387093:0:T	yes	1969	3	595	1964	1966	1967	1968	1969	1970	1975	1977	1978	-	1965	1969	590	0
SSP644076:5:F	yes	-	-	-	19	17	16	15	13	12	3	1	0	7	18	13	-	-
SSP644076:7:F	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
SSP64471:0:T	yes	-	-	-	1836	2321	2330	-	-	2333	2356	1	0	-	2322	2332	2356	2333
SSP84588:0:T	yes	-	-	-	1691	2100	-	-	-	2112	2137	1	0	-	2101	2111	2137	2112
STHE292459:0:T	yes	8	-	69	12	1220	10	1222	8	7	3	1228	0	5	1219	8	3	1224
STOK273063:0:T	yes	-	0	-	-	-	-	-	2	-	0	-	-	-	-	2	0	-
STRO369723:0:T	yes	3652	3882	10	3647	3649	3650	3651	3652	0	3657	3659	3660	3655	3648	3652	3882	-
STYP99287:1:T	yes	529	530	2	0	2	3	4	5	6	10	11	12	8	1	529	530	531
SWOL335541:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	1014	-	-
TACI273075:0:T	yes	-	-	2	0	2	-	-	6	7	8	10	11	-	-	6	8	7
TCRU317025:0:T	yes	-	772	0	782	780	-	778	777	776	772	770	769	774	781	777	-	776
TDEN292415:0:T	yes	-	-	0	673	671	670	669	668	667	663	661	660	665	672	-	-	667
TDEN326298:0:T	yes	-	11	2	0	2	3	4	-	6	11	13	14	-	1	5	11	-
TELO197221:0:T	yes	-	-	690	0	690	-	639	-	637	1263	675	1407	-	689	638	1263	637
TERY203124:0:T	yes	-	3664	-	1635	1	-	-	-	761	3664	2492	2493	-	0	760	3664	761
TFUS269800:0:T	yes	5	10	2	0	2	3	-	5	6	10	12	13	8	1	5	10	-
TKOD69014:0:T	yes	-	488	484	-	-	-	-	-	-	-	-	-	0	-	475	488	489
TLET416591:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
TMAR243274:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	966
TPEN368408:1:T	yes	2	3	0	-	885	-	-	892	891	-	-	-	-	-	2	3	7
TPET390874:0:T	no	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
TPSE340099:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
TROS309801:0:T	yes	-	-	0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
TROS309801:1:T	yes	-	960	-	966	964	-	962	651	961	960	958	957	0	965	651	960	-
TSP1755:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	-
TSP28240:0:T	yes	-	-	-	-	-	-	-	-	-	-	-	-	0	-	-	-	900
TTEN273068:0:T	yes	762	763	764	-	-	-	-	762	-	-	-	-	0	-	762	763	767
TTHE262724:1:T	yes	5	10	2	0	2	3	-	5	6	10	12	13	8	-	5	10	6
TTHE300852:2:T	yes	8	3	11	13	11	10	-	8	7	3	1	0	5	-	8	3	7
TVOL273116:0:T	yes	-	-	-	0	-	-	-	7	8	9	11	12	-	-	7	9	361
UMET351160:0:T	yes	-	3	-	-	-	-	-	-	-	-	-	-	-	-	4	3	0
VEIS391735:1:T	yes	-	-	1095	0	2	3	-	5	6	10	12	13	8	1	5	-	6
WPIP80849:0:T	yes	-	0	-	1215	1219	-	1223	837	595	0	281	279	845	1217	837	0	-
WPIP955:0:T	yes	-	356	-	721	719	-	717	732	0	356	866	867	728	720	732	356	-
WSUC273121:0:T	yes	1238	1239	13	15	13	12	11	10	9	3	1	0	-	14	1238	1239	1242
XAUT78245:1:T	yes	4477	3	-	4472	4474	-	4476	4477	4478	4482	4484	4485	4480	4473	4477	3	0
XAXO190486:0:T	yes	-	-	0	2229	2231	-	-	2234	2235	2239	2241	2242	2237	2230	-	-	2235
XCAM190485:0:T	yes	-	-	0	2069	2071	-	2073	2074	2075	2079	2081	2082	2077	2070	-	-	2075
XCAM314565:0:T	no	-	-	0	1131	1129	-	1127	1126	1125	1121	1119	1118	1123	1130	-	-	1125
XCAM316273:0:T	no	-	-	1212	0	2	-	4	5	6	10	12	13	8	1	-	-	6
XCAM487884:0:T	no	-	-	0	1168	1166	-	1164	1163	1162	1158	1156	1155	1160	1167	-	-	1162
XFAS160492:2:T	no	-	-	-	13	11	-	-	8	7	3	1	0	5	12	-	-	7
XFAS183190:1:T	yes	-	-	-	13	11	-	-	8	7	3	1	0	5	12	-	-	7
XFAS405440:0:T	no	-	-	-	13	11	-	-	8	7	3	1	0	5	12	-	-	7
XORY291331:0:T	no	-	-	849	0	2	-	-	5	6	11	13	14	8	1	-	-	6
XORY342109:0:T	yes	-	-	791	0	2	-	-	5	6	10	12	13	8	1	-	-	6
XORY360094:0:T	no	-	-	0	5369	5373	-	-	5379	5381	5389	5393	5395	5385	5371	-	-	5381
YENT393305:1:T	yes	1375	1374	1371	12	10	9	8	7	6	2	1	0	4	11	1375	1374	1370
YPES187410:5:T	no	7	2	10	12	10	9	8	7	6	2	1	0	4	11	7	2	6
YPES214092:3:T	no	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
YPES349746:2:T	no	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
YPES360102:3:T	yes	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
YPES377628:2:T	no	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
YPES386656:2:T	no	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
YPSE273123:2:T	no	5	10	2	0	2	3	4	5	6	10	11	12	8	1	5	10	6
YPSE349747:2:T	no	6	2	9	11	9	8	7	6	5	2	1	0	3	10	6	2	5