CANDIDATE ID: 22

CANDIDATE ID: 22

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9954302e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.8181818e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7340 (yphD) (b2546)
   Products of gene:
     - YPHD-MONOMER (YphD)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- G6800 (lsrA) (b1513)
   Products of gene:
     - YDEX-MONOMER (LsrA)
     - ABC-58-CPLX (LsrA/LsrC/LsrD/LsrB ABC transporter)

- EG12520 (ytfT) (b4230)
   Products of gene:
     - YTFT-MONOMER (YtfT)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12518 (ytfR) (b4228 (obsolete))
   Products of gene:
     - YTFR-MONOMER (YtfR)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12517 (ytfQ) (b4227)
   Products of gene:
     - YTFQ-MONOMER (YtfQ)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12275 (xylG) (b3567)
   Products of gene:
     - XYLG-MONOMER (XylG)
     - ABC-33-CPLX (XylF/XylG/XylH xylose ABC transporter)
       Reactions:
        ATP + alpha-D-xylose[periplasmic space] + H2O  ->  ADP + phosphate + alpha-D-xylose[cytosol]

- EG11959 (alsA) (b4087)
   Products of gene:
     - YJCW-MONOMER (AlsA)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG11958 (alsC) (b4086)
   Products of gene:
     - YJCV-MONOMER (AlsC)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG10816 (rbsC) (b3750)
   Products of gene:
     - RBSC-MONOMER (RbsC)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10814 (rbsA) (b3749)
   Products of gene:
     - RBSA-MONOMER (RbsA)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10592 (mglA) (b2149)
   Products of gene:
     - MGLA-MONOMER (MglA)
     - ABC-18-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]



Back to top


ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 156
Effective number of orgs (counting one per cluster within 468 clusters): 98

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175811
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295311
YPES386656 ncbi Yersinia pestis Pestoides F11
YPES377628 ncbi Yersinia pestis Nepal51611
YPES360102 ncbi Yersinia pestis Antiqua11
YPES349746 ncbi Yersinia pestis Angola11
YPES214092 ncbi Yersinia pestis CO9211
YPES187410 ncbi Yersinia pestis KIM 1011
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
VVUL216895 ncbi Vibrio vulnificus CMCP611
VVUL196600 ncbi Vibrio vulnificus YJ01611
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063311
VFIS312309 ncbi Vibrio fischeri ES11411
VEIS391735 ncbi Verminephrobacter eiseniae EF01-211
VCHO345073 ncbi Vibrio cholerae O39511
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696111
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB411
TSP28240 Thermotoga sp.10
TSP1755 Thermoanaerobacter sp.11
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 3322311
TPET390874 ncbi Thermotoga petrophila RKU-111
TMAR243274 ncbi Thermotoga maritima MSB811
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT211
SSON300269 ncbi Shigella sonnei Ss04611
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 1530510
SPRO399741 ncbi Serratia proteamaculans 56811
SPEA398579 ncbi Shewanella pealeana ATCC 70034511
SMEL266834 ncbi Sinorhizobium meliloti 102111
SMED366394 ncbi Sinorhizobium medicae WSM41911
SHIGELLA ncbi Shigella flexneri 2a str. 2457T10
SHAL458817 ncbi Shewanella halifaxensis HAW-EB410
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14359
SGLO343509 ncbi Sodalis glossinidius morsitans10
SFLE373384 ncbi Shigella flexneri 5 str. 840110
SFLE198214 ncbi Shigella flexneri 2a str. 30111
SERY405948 ncbi Saccharopolyspora erythraea NRRL 233811
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47611
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6711
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1811
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty211
SCO ncbi Streptomyces coelicolor A3(2)11
SBOY300268 ncbi Shigella boydii Sb22710
SAVE227882 ncbi Streptomyces avermitilis MA-468011
SAGA211110 ncbi Streptococcus agalactiae NEM31611
SAGA208435 ncbi Streptococcus agalactiae 2603V/R10
SAGA205921 ncbi Streptococcus agalactiae A90911
RXYL266117 ncbi Rubrobacter xylanophilus DSM 994111
RSOL267608 ncbi Ralstonia solanacearum GMI100010
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384111
RFER338969 ncbi Rhodoferax ferrireducens T1189
REUT264198 ncbi Ralstonia eutropha JMP1349
RETL347834 ncbi Rhizobium etli CFN 4211
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a11
PSP117 Pirellula sp.11
PPRO298386 ncbi Photobacterium profundum SS911
PMUL272843 ncbi Pasteurella multocida multocida Pm7011
PMOB403833 ncbi Petrotoga mobilis SJ959
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO111
PING357804 ncbi Psychromonas ingrahamii 3711
PFLU220664 ncbi Pseudomonas fluorescens Pf-510
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
OIHE221109 ncbi Oceanobacillus iheyensis HTE83111
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918811
MTHE264732 ncbi Moorella thermoacetica ATCC 3907310
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E10
MSP400668 ncbi Marinomonas sp. MWYL110
MLOT266835 ncbi Mesorhizobium loti MAFF30309911
LLAC272623 ncbi Lactococcus lactis lactis Il140310
LCHO395495 ncbi Leptothrix cholodnii SP-610
LCAS321967 ncbi Lactobacillus casei ATCC 33410
LACI272621 ncbi Lactobacillus acidophilus NCFM10
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857811
HSOM228400 ncbi Haemophilus somnus 233611
HSOM205914 ncbi Haemophilus somnus 129PT10
HMOD498761 ncbi Heliobacterium modesticaldum Ice19
HINF71421 ncbi Haemophilus influenzae Rd KW2011
HINF374930 ncbi Haemophilus influenzae PittEE11
HINF281310 ncbi Haemophilus influenzae 86-028NP11
HCHE349521 ncbi Hahella chejuensis KCTC 239610
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-211
GKAU235909 ncbi Geobacillus kaustophilus HTA42611
ESP42895 Enterobacter sp.11
EFER585054 ncbi Escherichia fergusonii ATCC 3546911
ECOO157 ncbi Escherichia coli O157:H7 EDL93311
ECOL83334 Escherichia coli O157:H711
ECOL585397 ncbi Escherichia coli ED1a11
ECOL585057 ncbi Escherichia coli IAI3911
ECOL585056 ncbi Escherichia coli UMN02611
ECOL585055 ncbi Escherichia coli 5598911
ECOL585035 ncbi Escherichia coli S8811
ECOL585034 ncbi Escherichia coli IAI111
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL413997 ncbi Escherichia coli B str. REL60611
ECOL409438 ncbi Escherichia coli SE1111
ECOL405955 ncbi Escherichia coli APEC O111
ECOL364106 ncbi Escherichia coli UTI8911
ECOL362663 ncbi Escherichia coli 53611
ECOL331111 ncbi Escherichia coli E24377A11
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
ECOL199310 ncbi Escherichia coli CFT07311
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104311
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247211
CTET212717 ncbi Clostridium tetani E8811
CPER195103 ncbi Clostridium perfringens ATCC 131249
CPER195102 ncbi Clostridium perfringens 139
CNOV386415 ncbi Clostridium novyi NT11
CDIF272563 ncbi Clostridium difficile 63011
CBOT515621 ncbi Clostridium botulinum Ba4 str. 65711
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B11
BXEN266265 ncbi Burkholderia xenovorans LB40011
BWEI315730 ncbi Bacillus weihenstephanensis KBAB411
BVIE269482 ncbi Burkholderia vietnamiensis G411
BTHU412694 ncbi Bacillus thuringiensis Al Hakam11
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-2711
BTHA271848 ncbi Burkholderia thailandensis E26411
BSUI470137 ncbi Brucella suis ATCC 2344511
BSUI204722 ncbi Brucella suis 133011
BSUB ncbi Bacillus subtilis subtilis 16811
BSP376 Bradyrhizobium sp.9
BSP36773 Burkholderia sp.11
BPUM315750 ncbi Bacillus pumilus SAFR-03211
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b10
BPSE272560 ncbi Burkholderia pseudomallei K9624310
BOVI236 Brucella ovis11
BMEL359391 ncbi Brucella melitensis biovar Abortus 230811
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M11
BLIC279010 ncbi Bacillus licheniformis ATCC 1458011
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11010
BHAL272558 ncbi Bacillus halodurans C-12511
BCLA66692 ncbi Bacillus clausii KSM-K1611
BCER572264 ncbi Bacillus cereus 03BB10211
BCER405917 Bacillus cereus W11
BCER315749 ncbi Bacillus cytotoxicus NVH 391-9811
BCER288681 ncbi Bacillus cereus E33L11
BCER226900 ncbi Bacillus cereus ATCC 1457910
BCEN331272 ncbi Burkholderia cenocepacia HI242411
BCEN331271 ncbi Burkholderia cenocepacia AU 105411
BCAN483179 ncbi Brucella canis ATCC 2336511
BANT592021 ncbi Bacillus anthracis A024811
BANT568206 ncbi Bacillus anthracis CDC 68411
BANT261594 ncbi Bacillus anthracis Ames Ancestor11
BANT260799 ncbi Bacillus anthracis Sterne11
BAMY326423 ncbi Bacillus amyloliquefaciens FZB4211
BAMB398577 ncbi Burkholderia ambifaria MC40-611
BAMB339670 ncbi Burkholderia ambifaria AMMD11
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94111
AVAR240292 ncbi Anabaena variabilis ATCC 2941310
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44910
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0311
APLE416269 ncbi Actinobacillus pleuropneumoniae L2011
AMET293826 ncbi Alkaliphilus metalliredigens QYMF10
AHYD196024 Aeromonas hydrophila dhakensis11


Names of the homologs of the genes in the group in each of these orgs
  G7340   G6800   EG12520   EG12518   EG12517   EG12275   EG11959   EG11958   EG10816   EG10814   EG10592   
YPSE349747 YPSIP31758_4029YPSIP31758_3521YPSIP31758_0149YPSIP31758_0148YPSIP31758_0147YPSIP31758_4100YPSIP31758_0813YPSIP31758_4029YPSIP31758_1509YPSIP31758_2466YPSIP31758_2466
YPSE273123 YPTB3806YPTB0552YPTB0129YPTB0128YPTB0127YPTB3889YPTB3230YPTB3806YPTB2535YPTB1523YPTB1523
YPES386656 YPDSF_3327YPDSF_3219YPDSF_3518YPDSF_3519YPDSF_3520YPDSF_3778YPDSF_0556YPDSF_3327YPDSF_1910YPDSF_1469YPDSF_1469
YPES377628 YPN_3612YPN_0282YPN_0061YPN_0060YPN_0059YPN_3683YPN_3156YPN_3612YPN_2093YPN_2471YPN_2471
YPES360102 YPA_3791YPA_3873YPA_0116YPA_0115YPA_0114YPA_4126YPA_0306YPA_3791YPA_1994YPA_0803YPA_0803
YPES349746 YPANGOLA_A4097YPANGOLA_A0858YPANGOLA_A0477YPANGOLA_A0476YPANGOLA_A0475YPANGOLA_A4157YPANGOLA_A0157YPANGOLA_A4097YPANGOLA_A1759YPANGOLA_A3018YPANGOLA_A3018
YPES214092 YPO3963YPO0412YPO3906YPO3907YPO3908YPO4036YPO0958YPO3963YPO2499YPO1508YPO1508
YPES187410 Y3866Y3769Y0330Y0329Y0328Y4055Y3345Y3866Y1689Y2661Y2661
YENT393305 YE0010YE0528YE0143YE0142YE0141YE4120YE2814YE0010YE0010YE0009YE2814
VVUL216895 VV2_0063VV2_0062VV2_0063VV2_0062VV2_0064VV2_0062VV2_0062VV2_0063VV2_0063VV2_0062VV2_1325
VVUL196600 VVA0570VVA0569VVA0570VVA0569VVA0571VVA0569VVA0162VVA0570VVA0570VVA0569VVA0162
VPAR223926 VPA1085VPA1086VPA1085VPA1672VPA1084VPA1086VPA1086VPA1085VPA1085VPA1086VPA1086
VFIS312309 VF1446VF1445VF1446VF1445VF1447VF1445VF1445VF1446VF1446VF1445VF1445
VEIS391735 VEIS_3417VEIS_2120VEIS_2045VEIS_2025VEIS_2026VEIS_0738VEIS_1088VEIS_2045VEIS_2045VEIS_1088VEIS_0061
VCHO345073 VC0395_0009VC0395_0010VC0395_0009VC0395_0010VC0395_0008VC0395_0010VC0395_A0944VC0395_0009VC0395_0009VC0395_0010VC0395_A0944
VCHO VCA0129VCA0128VCA0129VCA0128VCA0130VCA0128VC1327VCA0129VCA0129VCA0128VC1327
TTEN273068 TTE0205TTE0204TTE0205TTE0204TTE0206TTE0204TTE0763TTE0764TTE0205TTE0204TTE0763
TSP28240 TRQ2_0835TRQ2_0975TRQ2_0975TRQ2_0833TRQ2_0975TRQ2_0975TRQ2_0974TRQ2_0974TRQ2_0975TRQ2_0975
TSP1755 TETH514_0158TETH514_0164TETH514_0165TETH514_0164TETH514_0166TETH514_0157TETH514_0164TETH514_0165TETH514_0165TETH514_0164TETH514_0157
TPSE340099 TETH39_2039TETH39_2040TETH39_2039TETH39_2040TETH39_2038TETH39_2040TETH39_2040TETH39_2039TETH39_2039TETH39_2040TETH39_2040
TPET390874 TPET_0812TPET_1792TPET_1793TPET_0809TPET_1794TPET_0809TPET_0809TPET_1793TPET_1793TPET_0809TPET_0809
TMAR243274 TM_0955TM_0956TM_0955TM_0956TM_0958TM_0956TM_0115TM_0955TM_0955TM_0956TM_0956
STYP99287 STM3883STM4074STM3883STM3882STM3884STM3882STM3882STM3883STM3883STM3882STM2189
SSON300269 SSO_2629SSO_3919SSO_4411SSO_4410SSO_4409SSO_3919SSO_2205SSO_3920SSO_3920SSO_3919SSO_2205
SSAP342451 SSP1393SSP1394SSP1393SSP1394SSP1392SSP1394SSP1393SSP1393SSP1394SSP1394
SPRO399741 SPRO_4227SPRO_1029SPRO_4766SPRO_4767SPRO_4768SPRO_0100SPRO_1029SPRO_4899SPRO_4899SPRO_4900SPRO_1564
SPEA398579 SPEA_0516SPEA_0515SPEA_2283SPEA_0515SPEA_0517SPEA_0515SPEA_2284SPEA_0516SPEA_0516SPEA_0515SPEA_0515
SMEL266834 SMB21375SMB21019SMB21589SMB21588SMB21587SMB20894SMB21376SMC02772SMB20352SMC02325SMB20713
SMED366394 SMED_4767SMED_4316SMED_4910SMED_4909SMED_4908SMED_4474SMED_4768SMED_5745SMED_3767SMED_0226SMED_4267
SHIGELLA YPHDS1709YTFTYTFRXYLGMGLARBSCRBSCMGLAMGLA
SHAL458817 SHAL_0580SHAL_0579SHAL_2011SHAL_0581SHAL_0579SHAL_2010SHAL_0580SHAL_0580SHAL_0579SHAL_0579
SHAE279808 SH0178SH0177SH0178SH0179SH0177SH0178SH0178SH0177SH0177
SGLO343509 SG0613SG0613SG0964SG0614SG0964SG0964SG0613SG0613SG0964SG0964
SFLE373384 SFV_2594SFV_1568SFV_4262SFV_4263SFV_3973SFV_2224SFV_3749SFV_3749SFV_3973SFV_2224
SFLE198214 AAN44091.1AAN43170.1AAN45679.1AAN45680.1AAN45681.1AAN45060.1AAN43755.1AAN45272.1AAN45272.1AAN43755.1AAN43755.1
SERY405948 SACE_5660SACE_5659SACE_2988SACE_5659SACE_5660SACE_5659SACE_5659SACE_1882SACE_5660SACE_5659SACE_5659
SENT454169 SEHA_C4216SEHA_C4405SEHA_C4216SEHA_C4215SEHA_C4217SEHA_C4215SEHA_C4215SEHA_C4216SEHA_C4216SEHA_C4215SEHA_C2424
SENT321314 SCH_3796SCH_3795SCH_3796SCH_3795SCH_3797SCH_3795SCH_3795SCH_3796SCH_3796SCH_3795SCH_3795
SENT220341 STY3895STY3796STY3895STY3896STY3894STY3896STY3896STY3895STY3895STY3896STY3896
SENT209261 T3636T3544T3636T3637T3635T3637T3637T3636T3636T3637T3637
SCO SCO2747SCO6567SCO6568SCO2746SCO2747SCO2405SCO2405SCO2747SCO2747SCO2746SCO2746
SBOY300268 SBO_2572SBO_4216SBO_3126SBO_4218SBO_3575SBO_2178SBO_3764SBO_3764SBO_3575SBO_2178
SAVE227882 SAV1827SAV7416SAV1827SAV970SAV971SAV5768SAV7416SAV5318SAV5318SAV7416SAV5319
SAGA211110 GBS0114GBS0115GBS0114GBS0115GBS0113GBS0115GBS0115GBS0114GBS0114GBS0115GBS0115
SAGA208435 SAG_0115SAG_0116SAG_0115SAG_0114SAG_0116SAG_0116SAG_0115SAG_0115SAG_0116SAG_0116
SAGA205921 SAK_0167SAK_0168SAK_0167SAK_0168SAK_0166SAK_0168SAK_0168SAK_0167SAK_0167SAK_0168SAK_0168
RXYL266117 RXYL_1889RXYL_1684RXYL_3002RXYL_0946RXYL_0948RXYL_0946RXYL_3003RXYL_3002RXYL_0947RXYL_0946RXYL_0946
RSOL267608 RSP1635RSC1016RSC1243RSC1242RSC1241RSP1634RSC1242RSC1243RSC1242RSC1242
RLEG216596 PRL90223RL2449RL2378RL2377RL2376RL3616RL2449RL1746RL1746RL4654RL4654
RFER338969 RFER_0439RFER_0439RFER_3129RFER_3129RFER_3129RFER_0439RFER_3130RFER_3129RFER_3129
REUT264198 REUT_A1653REUT_A1652REUT_A1653REUT_A1653REUT_A1653REUT_A1652REUT_A1652REUT_A1653REUT_A1653
RETL347834 RHE_CH03189RHE_PB00077RHE_CH02087RHE_CH02086RHE_CH02085RHE_CH03164RHE_PB00077RHE_CH01211RHE_PF00034RHE_CH03989RHE_CH03989
PSYR223283 PSPTO_3489PSPTO_2400PSPTO_3489PSPTO_3490PSPTO_3004PSPTO_3489PSPTO_3488PSPTO_3488PSPTO_3489PSPTO_3489
PSYR205918 PSYR_2570PSYR_3264PSYR_2570PSYR_3264PSYR_3265PSYR_2885PSYR_3264PSYR_2570PSYR_2570PSYR_3264PSYR_3264
PSP117 RB3497RB10181RB3497RB9385RB3493RB3496RB3496RB3497RB3497RB3496RB3496
PPRO298386 PBPRB1558PBPRB1557PBPRB1558PBPRB0473PBPRB1559PBPRA0463PBPRB1871PBPRB1558PBPRB1558PBPRB1557PBPRB1871
PMUL272843 PM0154PM1274PM1378PM0155PM0153PM0155PM1326PM0154PM0154PM0155PM1039
PMOB403833 PMOB_1602PMOB_0637PMOB_0922PMOB_1601PMOB_0923PMOB_0921PMOB_1601PMOB_1602PMOB_0922
PLUM243265 PLU0057PLU3143PLU0057PLU0056PLU0058PLU0056PLU0056PLU0057PLU0057PLU0056PLU0056
PING357804 PING_0342PING_0341PING_2807PING_2808PING_0343PING_0341PING_0341PING_0342PING_0342PING_0341PING_0341
PFLU220664 PFL_2594PFL_2595PFL_2594PFL_2593PFL_2594PFL_2594PFL_2595PFL_2595PFL_2594PFL_2594
PFLU216595 PFLU3119PFLU2585PFLU3995PFLU2583PFLU2299PFLU3119PFLU3994PFLU3994PFLU2584PFLU2584
OIHE221109 OB2573OB2574OB2573OB2574OB2572OB2574OB2574OB2573OB2573OB2574OB2574
OANT439375 OANT_0290OANT_3406OANT_1416OANT_1417OANT_1418OANT_3415OANT_0291OANT_4066OANT_4066OANT_3347OANT_3347
MTHE264732 MOTH_0614MOTH_0614MOTH_0613MOTH_0699MOTH_2021MOTH_0613MOTH_0614MOTH_0614MOTH_0613MOTH_0613
MSUC221988 MS0199MS0199MS0062MS1612MS0062MS0642MS0199MS0199MS0062MS0642
MSP400668 MMWYL1_1867MMWYL1_1859MMWYL1_3533MMWYL1_3534MMWYL1_3535MMWYL1_1866MMWYL1_1986MMWYL1_3108MMWYL1_1987MMWYL1_1986
MLOT266835 MLL1013MLR4967MLL7665MLL3598MLL1012MLL5657MLL5705MLL2145MLL7011MLL3598MLL5657
LLAC272623 L83296L84240L83296L82310L84240L84240L83296L83296L84240L84240
LCHO395495 LCHO_3312LCHO_2222LCHO_3312LCHO_3313LCHO_3199LCHO_3312LCHO_3198LCHO_3311LCHO_3312LCHO_3312
LCAS321967 LSEI_0309LSEI_0308LSEI_0309LSEI_0308LSEI_0310LSEI_0308LSEI_0309LSEI_0309LSEI_0308LSEI_0308
LACI272621 LBA1483LBA1482LBA1483LBA1481LBA1483LBA1483LBA1482LBA1482LBA1483LBA1483
KPNE272620 GKPORF_B3497GKPORF_B2851GKPORF_B3986GKPORF_B3985GKPORF_B3984GKPORF_B3283GKPORF_B4919GKPORF_B3497GKPORF_B3497GKPORF_B3496GKPORF_B1873
HSOM228400 HSM_0091HSM_1944HSM_0822HSM_0431HSM_0092HSM_0934HSM_0557HSM_0558HSM_0091HSM_0090HSM_0104
HSOM205914 HS_0584HS_0051HS_1579HS_1580HS_1581HS_0585HS_0768HS_0584HS_0769HS_1580
HMOD498761 HM1_2418HM1_2419HM1_2418HM1_2420HM1_2418HM1_2419HM1_2419HM1_2418HM1_2418
HINF71421 HI_0503HI_0502HI_0503HI_0502HI_0504HI_1110HI_0823HI_0503HI_0503HI_0502HI_0823
HINF374930 CGSHIEE_06515CGSHIEE_00480CGSHIEE_00475CGSHIEE_00480CGSHIEE_00470CGSHIEE_00480CGSHIEE_07945CGSHIEE_00475CGSHIEE_00475CGSHIEE_00480CGSHIEE_07945
HINF281310 NTHI0631NTHI0630NTHI0631NTHI0630NTHI0632NTHI0630NTHI0630NTHI0631NTHI0631NTHI0630NTHI0988
HCHE349521 HCH_01167HCH_02470HCH_02469HCH_01166HCH_01167HCH_01167HCH_02470HCH_02470HCH_01167HCH_01167
GTHE420246 GTNG_3171GTNG_3172GTNG_3171GTNG_3172GTNG_3170GTNG_1800GTNG_3172GTNG_3171GTNG_3171GTNG_3172GTNG_3172
GKAU235909 GK3227GK3228GK1893GK3228GK3226GK1880GK3228GK3227GK3227GK3228GK1894
ESP42895 ENT638_4114ENT638_3536ENT638_0414ENT638_0413ENT638_0412ENT638_0289ENT638_0289ENT638_0288ENT638_4114ENT638_4115ENT638_2749
EFER585054 EFER_4049EFER_1564EFER_4308EFER_4307EFER_4306EFER_4048EFER_4283EFER_4284EFER_4049EFER_4048EFER_2234
ECOO157 YPHDZ2192YTFTZ5839YTFQXYLGMGLAZ5690RBSCRBSAMGLA
ECOL83334 ECS3412ECS2120ECS5207ECS5206ECS5205ECS4450ECS3041ECS5072ECS4692ECS4691ECS3041
ECOL585397 ECED1_2973ECED1_4439ECED1_5086ECED1_5085ECED1_5084ECED1_4439ECED1_4821ECED1_4820ECED1_4440ECED1_4439ECED1_2596
ECOL585057 ECIAI39_2749ECIAI39_4354ECIAI39_4700ECIAI39_4699ECIAI39_4698ECIAI39_4079ECIAI39_4511ECIAI39_4510ECIAI39_4355ECIAI39_4354ECIAI39_2288
ECOL585056 ECUMN_2866ECUMN_1781ECUMN_4763ECUMN_4762ECUMN_4761ECUMN_4078ECUMN_2482ECUMN_4280ECUMN_4280ECUMN_4279ECUMN_2482
ECOL585055 EC55989_2832EC55989_1646EC55989_4788EC55989_4787EC55989_4786EC55989_4022EC55989_2399EC55989_4225EC55989_4225EC55989_4224EC55989_2399
ECOL585035 ECS88_2716ECS88_4171ECS88_4820ECS88_4819ECS88_4818ECS88_3985ECS88_4588ECS88_4172ECS88_4172ECS88_4171ECS88_2295
ECOL585034 ECIAI1_2599ECIAI1_1525ECIAI1_4462ECIAI1_4461ECIAI1_4460ECIAI1_3732ECIAI1_2226ECIAI1_3934ECIAI1_3934ECIAI1_3933ECIAI1_2226
ECOL481805 ECOLC_1131ECOLC_2145ECOLC_3781ECOLC_3782ECOLC_3783ECOLC_0147ECOLC_3939ECOLC_3940ECOLC_4244ECOLC_4245ECOLC_1499
ECOL469008 ECBD_1138ECBD_4281ECBD_3804ECBD_3805ECBD_3806ECBD_4281ECBD_3943ECBD_3944ECBD_4280ECBD_4281ECBD_1509
ECOL439855 ECSMS35_2699ECSMS35_1659ECSMS35_4707ECSMS35_4706ECSMS35_4705ECSMS35_3890ECSMS35_4553ECSMS35_4552ECSMS35_4118ECSMS35_4117ECSMS35_2296
ECOL413997 ECB_02438ECB_03635ECB_04098ECB_04097ECB_04096ECB_03635ECB_03959ECB_03958ECB_03636ECB_03635ECB_02078
ECOL409438 ECSE_2833ECSE_1603ECSE_4535ECSE_4534ECSE_4533ECSE_3842ECSE_4385ECSE_4384ECSE_4040ECSE_4039ECSE_2416
ECOL405955 APECO1_3985APECO1_2714APECO1_2162APECO1_2163APECO1_2164APECO1_2882APECO1_2363APECO1_2364APECO1_2713APECO1_2714APECO1_4402
ECOL364106 UTI89_C2865UTI89_C4304UTI89_C4834UTI89_C4833UTI89_C4832UTI89_C4108UTI89_C4682UTI89_C4305UTI89_C4305UTI89_C4304UTI89_C2422
ECOL362663 ECP_2547ECP_3948ECP_4479ECP_4478ECP_4477ECP_3670ECP_4330ECP_3344ECP_3671ECP_3948ECP_2188
ECOL331111 ECE24377A_2831ECE24377A_1714ECE24377A_4799ECE24377A_4798ECE24377A_4797ECE24377A_4063ECE24377A_2444ECE24377A_4266ECE24377A_4266ECE24377A_4265ECE24377A_2444
ECOL316407 ECK2543:JW2530:B2546ECK1506:JW1506:B1513ECK4225:JW5753:B4230ECK4224:JW5752:B4485ECK4223:JW4186:B4227ECK3556:JW3539:B3567ECK4080:JW4048:B4087ECK4079:JW4047:B4086ECK3744:JW3729:B3750ECK3743:JW3728:B3749ECK2142:JW2136:B2149
ECOL199310 C3068C4677C5327C5326C5325C4387C5093C5092C4678C4677C2683
ECAR218491 ECA0012ECA0011ECA4234ECA4235ECA4236ECA0099ECA0011ECA1461ECA0012ECA0011ECA0011
CVIO243365 CV_3017CV_3018CV_3017CV_3018CV_3016CV_3018CV_3018CV_3017CV_3017CV_3018CV_3018
CTET212717 CTC_00906CTC_02350CTC_02349CTC_02350CTC_02347CTC_02350CTC_00905CTC_02349CTC_02349CTC_02350CTC_00861
CPER195103 CPF_1882CPF_1881CPF_1549CPF_1882CPF_1882CPF_1881CPF_1881CPF_1882CPF_1549
CPER195102 CPE1630CPE1629CPE1342CPE1630CPE1630CPE1629CPE1629CPE1630CPE1342
CNOV386415 NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0164NT01CX_0162NT01CX_0164NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0164NT01CX_0164
CDIF272563 CD1588CD0301CD0302CD0301CD1589CD0301CD0301CD1588CD0302CD0301CD0301
CBOT515621 CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1312CLJ_B1315CLJ_B1312CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1312CLJ_B1312
CBOT508765 CLL_A1530CLL_A1529CLL_A1530CLL_A1529CLL_A1531CLL_A1529CLL_A1529CLL_A1530CLL_A1530CLL_A1529CLL_A1529
BXEN266265 BXE_B1397BXE_C1350BXE_B1397BXE_C1350BXE_B0573BXE_B2620BXE_C1350BXE_B1397BXE_C1349BXE_C1350BXE_C1350
BWEI315730 BCERKBAB4_0582BCERKBAB4_2772BCERKBAB4_0582BCERKBAB4_0581BCERKBAB4_0583BCERKBAB4_0581BCERKBAB4_0581BCERKBAB4_0582BCERKBAB4_0582BCERKBAB4_0581BCERKBAB4_0581
BVIE269482 BCEP1808_3838BCEP1808_1389BCEP1808_6550BCEP1808_6551BCEP1808_6552BCEP1808_6448BCEP1808_1389BCEP1808_1507BCEP1808_3381BCEP1808_1389BCEP1808_1389
BTHU412694 BALH_0611BALH_2664BALH_0611BALH_0609BALH_0612BALH_0609BALH_0609BALH_0611BALH_0611BALH_0609BALH_0609
BTHU281309 BT9727_0579BT9727_2716BT9727_0579BT9727_0578BT9727_0580BT9727_0578BT9727_0578BT9727_0579BT9727_0579BT9727_0578BT9727_0578
BTHA271848 BTH_I2433BTH_II0211BTH_I2344BTH_I2343BTH_I2342BTH_I2340BTH_I2434BTH_I2433BTH_I2433BTH_II0211BTH_II1627
BSUI470137 BSUIS_A1690BSUIS_A0571BSUIS_A1690BSUIS_B0929BSUIS_A1689BSUIS_B0929BSUIS_B0929BSUIS_A1690BSUIS_A1690BSUIS_A1691BSUIS_A1691
BSUI204722 BR_1631BR_0542BR_1631BR_A0936BR_1630BR_A1151BR_A0936BR_1631BR_1631BR_1632BR_A1151
BSUB BSU35950BSU35940BSU35950BSU35940BSU35960BSU35940BSU35940BSU35950BSU35950BSU35940BSU35940
BSP376 BRADO5633BRADO1809BRADO1808BRADO1807BRADO1818BRADO1394BRADO1819BRADO1809BRADO1394
BSP36773 BCEP18194_B0047BCEP18194_A4569BCEP18194_A4682BCEP18194_B2370BCEP18194_B2371BCEP18194_A4683BCEP18194_B0624BCEP18194_B0886BCEP18194_B0886BCEP18194_A4569BCEP18194_A4569
BPUM315750 BPUM_3267BPUM_3266BPUM_3267BPUM_3266BPUM_3268BPUM_3266BPUM_3266BPUM_3267BPUM_3267BPUM_3266BPUM_3266
BPSE320373 BURPS668_A0286BURPS668_A0456BURPS668_1908BURPS668_A0457BURPS668_A0286BURPS668_A0286BURPS668_1909BURPS668_1909BURPS668_A0286BURPS668_A0286
BPSE320372 BURPS1710B_B1956BURPS1710B_B1955BURPS1710B_A2229BURPS1710B_B2112BURPS1710B_B1956BURPS1710B_B1956BURPS1710B_A2230BURPS1710B_A2230BURPS1710B_B1956BURPS1710B_B1956
BPSE272560 BPSS0142BPSS0141BPSL2967BPSS0257BPSS0142BPSS0142BPSL1791BPSL1791BPSS0142BPSS0142
BOVI236 GBOORF1646GBOORF0569GBOORF1646GBOORFA0965GBOORF1645GBOORFA0965GBOORFA0965GBOORF1646GBOORF1646GBOORF1647GBOORF1647
BMEL359391 BAB1_1649BAB1_0565BAB1_1649BAB2_0299BAB1_1648BAB2_1110BAB2_0299BAB1_1649BAB1_1649BAB2_1110BAB2_1110
BMEL224914 BMEI0392BMEI1392BMEI0392BMEII0361BMEI0393BMEII0145BMEII0361BMEI0392BMEI0392BMEII0145BMEII0145
BLIC279010 BL02442BL02441BL02442BL02441BL02443BL01747BL02441BL02442BL02442BL02441BL02441
BJAP224911 BLR1122BLL5784BLR3202BLR3201BLR3200BLR3209BLR2270BLL2676BLR1122BLL2677
BHAL272558 BH3731BH3730BH2321BH3730BH3732BH3441BH3730BH3731BH3731BH3730BH2322
BCLA66692 ABC3545ABC3546ABC3545ABC3546ABC3544ABC0410ABC3546ABC3545ABC3545ABC3546ABC3546
BCER572264 BCA_0706BCA_3049BCA_0706BCA_0705BCA_0707BCA_0705BCA_0705BCA_0706BCA_0706BCA_0705BCA_0705
BCER405917 BCE_0736BCE_3015BCE_0736BCE_0735BCE_0737BCE_0735BCE_0735BCE_0736BCE_0736BCE_0735BCE_0735
BCER315749 BCER98_0563BCER98_0562BCER98_0563BCER98_0562BCER98_0564BCER98_0562BCER98_0562BCER98_0563BCER98_0563BCER98_0562BCER98_0562
BCER288681 BCE33L0578BCE33L2696BCE33L0578BCE33L0577BCE33L0579BCE33L0577BCE33L0577BCE33L0578BCE33L0578BCE33L0577BCE33L0577
BCER226900 BC_0663BC_0662BC_0663BC_0662BC_0662BC_0662BC_0663BC_0663BC_0662BC_0662
BCEN331272 BCEN2424_5639BCEN2424_1425BCEN2424_5990BCEN2424_5991BCEN2424_5992BCEN2424_6737BCEN2424_5039BCEN2424_4818BCEN2424_4818BCEN2424_1425BCEN2424_1425
BCEN331271 BCEN_5220BCEN_0943BCEN_5625BCEN_5626BCEN_5627BCEN_6503BCEN_3328BCEN_3549BCEN_3549BCEN_0943BCEN_0943
BCAN483179 BCAN_A1668BCAN_A0554BCAN_A1668BCAN_B0956BCAN_A1667BCAN_B1180BCAN_B0956BCAN_A1668BCAN_A1668BCAN_A1669BCAN_B1180
BANT592021 BAA_0752BAA_3031BAA_0752BAA_0751BAA_0753BAA_0751BAA_0751BAA_0752BAA_0752BAA_0751BAA_0751
BANT568206 BAMEG_3918BAMEG_1626BAMEG_3918BAMEG_3919BAMEG_3917BAMEG_3919BAMEG_3919BAMEG_3918BAMEG_3918BAMEG_3919BAMEG_3919
BANT261594 GBAA0668GBAA2978GBAA0668GBAA0667GBAA0669GBAA0667GBAA0667GBAA0668GBAA0668GBAA0667GBAA0667
BANT260799 BAS0635BAS2766BAS0635BAS0634BAS0636BAS0634BAS0634BAS0635BAS0635BAS0634BAS0634
BAMY326423 RBAM_033120RBAM_033110RBAM_033120RBAM_033110RBAM_033130RBAM_033110RBAM_033110RBAM_033120RBAM_033120RBAM_033110RBAM_033110
BAMB398577 BAMMC406_1253BAMMC406_1212BAMMC406_5926BAMMC406_5925BAMMC406_5924BAMMC406_6035BAMMC406_4967BAMMC406_4722BAMMC406_4722BAMMC406_1344BAMMC406_1344
BAMB339670 BAMB_6336BAMB_1305BAMB_6195BAMB_6194BAMB_6193BAMB_6335BAMB_4447BAMB_4199BAMB_4199BAMB_4447BAMB_1305
BABO262698 BRUAB1_1619BRUAB1_0564BRUAB1_1619BRUAB2_0297BRUAB1_1618BRUAB2_1088BRUAB2_0297BRUAB1_1619BRUAB1_1619BRUAB2_1088BRUAB2_1088
AVAR240292 AVA_2173AVA_2172AVA_2173AVA_2172AVA_2172AVA_2172AVA_2173AVA_2173AVA_2172AVA_2172
ASAL382245 ASA_1969ASA_2138ASA_2139ASA_2140ASA_0215ASA_0215ASA_1969ASA_1969ASA_2395ASA_0215
APLE434271 APJL_1702APJL_1701APJL_1702APJL_1701APJL_1703APJL_1957APJL_1451APJL_1702APJL_1702APJL_1701APJL_1451
APLE416269 APL_1671APL_1670APL_1671APL_1670APL_1672APL_1910APL_1419APL_1671APL_1671APL_1670APL_1419
AMET293826 AMET_0458AMET_2813AMET_0458AMET_0587AMET_2813AMET_0587AMET_0588AMET_0588AMET_2813AMET_0587
AHYD196024 AHA_2311AHA_2310AHA_2311AHA_2310AHA_2312AHA_2310AHA_2310AHA_2311AHA_2311AHA_2310AHA_4099


Organism features enriched in list (features available for 146 out of the 156 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001712740112
Disease:Anthrax 0.003812644
Disease:Brucellosis 0.000935055
Disease:Bubonic_plague 0.000228166
Disease:Dysentery 0.004241756
Disease:Gastroenteritis 0.00009691013
Endospores:No 4.077e-631211
Endospores:Yes 4.023e-83153
GC_Content_Range4:0-40 0.000179336213
GC_Content_Range4:40-60 9.000e-883224
GC_Content_Range7:30-40 0.002230829166
GC_Content_Range7:50-60 1.051e-647107
GC_Content_Range7:60-70 0.004756923134
Genome_Size_Range5:0-2 1.865e-156155
Genome_Size_Range5:2-4 0.001104735197
Genome_Size_Range5:4-6 9.862e-1178184
Genome_Size_Range5:6-10 5.922e-72747
Genome_Size_Range9:1-2 1.703e-116128
Genome_Size_Range9:2-3 0.002724619120
Genome_Size_Range9:4-5 0.00004044096
Genome_Size_Range9:5-6 0.00002513888
Genome_Size_Range9:6-8 0.00002792138
Genome_Size_Range9:8-10 0.008309969
Gram_Stain:Gram_Neg 0.003921496333
Habitat:Aquatic 0.00320291391
Habitat:Multiple 0.000565460178
Habitat:Specialized 0.0058649653
Habitat:Terrestrial 0.00071751631
Motility:No 3.259e-618151
Motility:Yes 0.000021288267
Oxygen_Req:Aerobic 0.008496336185
Oxygen_Req:Anaerobic 0.005087216102
Oxygen_Req:Facultative 2.068e-1184201
Pathogenic_in:Animal 0.00534882566
Pathogenic_in:Human 0.000046173213
Pathogenic_in:No 0.000350340226
Shape:Coccus 0.0004322982
Shape:Rod 3.811e-12121347
Temp._range:Mesophilic 0.0059465128473



Back to top


ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 412
Effective number of orgs (counting one per cluster within 468 clusters): 322

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354052
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis0
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170252
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332092
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139412
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6662
PRUM264731 ncbi Prevotella ruminicola 231
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ22
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PENT384676 ncbi Pseudomonas entomophila L481
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO11
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA141
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC31964 ncbi Clavibacter michiganensis sepedonicus2
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7340   G6800   EG12520   EG12518   EG12517   EG12275   EG11959   EG11958   EG10816   EG10814   EG10592   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245 XAUT_2413
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0417
TWHI203267 TW330
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TPEN368408
TPAL243276 TP_0685
TKOD69014
TFUS269800
TELO197221
TDEN326298
TDEN292415
TDEN243275 TDE_2216TDE_2216
TCRU317025
TACI273075
SWOL335541 SWOL_0426
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSED425104
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SONE211586
SMUT210007
SMAR399550
SLOI323850
SLAC55218
SGOR29390
SFUM335543
SEPI176280
SEPI176279
SELO269084
SDEN318161
SBAL402882
SBAL399599
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SACI56780
SACI330779
RTYP257363
RSPH349102 RSPH17025_2683RSPH17025_0234
RSAL288705 RSAL33209_0263RSAL33209_0264
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_2667RCAS_0867
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811
PSP312153
PSP296591 BPRO_3204BPRO_3204
PRUM264731 GFRORF2271
PPUT76869
PPUT351746
PPUT160488
PPEN278197
PNAP365044 PNAP_2604PNAP_2604
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198 PIN_A0148
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PENT384676 PSEEN1952
PDIS435591 BDI_1484
PCRY335284
PCAR338963
PATL342610
PAST100379
PARS340102
PARC259536
PAER208964 PA1946
PAER208963 PA14_39350
PAER178306
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSED399549
MPUL272635 MYPU_3440
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748 MMOB0140
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP512
MHYO262722 MHP7448_0514
MHYO262719 MHJ_0512
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LMES203120
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
JSP375286
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMAR272569
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154 GFO_0006
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNOD381764 FNOD_1667
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC31964 CMS0135CMS0996
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194 CHY_1535
CHUT269798
CHOM360107
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CACE272562 CAC1351
CABO218497
BTUR314724
BTRI382640
BTHE226186 BT_1754
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BHER314723
BHEN283166
BGAR290434
BFRA295405 BF3339
BFRA272559 BF3174
BCIC186490
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
APHA212042
APER272557
AORE350688
ANAE240017
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACEL351607 ACEL_1049
ABUT367737
ABOR393595
ABAU360910
AAEO224324


Organism features enriched in list (features available for 387 out of the 412 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000312859112
Disease:Gastroenteritis 0.0013873313
Endospores:No 0.0000425161211
Endospores:Yes 3.302e-71853
GC_Content_Range4:0-40 5.609e-8170213
GC_Content_Range4:40-60 0.0002610130224
GC_Content_Range4:60-100 0.009495386145
GC_Content_Range7:30-40 2.667e-6133166
GC_Content_Range7:50-60 0.000012352107
Genome_Size_Range5:0-2 1.987e-24149155
Genome_Size_Range5:2-4 0.0013126146197
Genome_Size_Range5:4-6 7.575e-1679184
Genome_Size_Range5:6-10 1.436e-81347
Genome_Size_Range9:0-1 0.00001142727
Genome_Size_Range9:1-2 2.414e-18122128
Genome_Size_Range9:2-3 0.000577794120
Genome_Size_Range9:4-5 3.442e-74296
Genome_Size_Range9:5-6 2.186e-73788
Genome_Size_Range9:6-8 9.962e-71138
Genome_Size_Range9:8-10 0.007332829
Gram_Stain:Gram_Neg 0.0048701208333
Habitat:Aquatic 0.00165257291
Habitat:Host-associated 0.0023330151206
Habitat:Multiple 0.0002155100178
Habitat:Specialized 0.00643454353
Habitat:Terrestrial 0.0000117931
Motility:No 0.0002411117151
Motility:Yes 8.038e-6153267
Optimal_temp.:30-37 0.00521051718
Oxygen_Req:Anaerobic 0.002827779102
Oxygen_Req:Facultative 2.600e-7106201
Shape:Coccus 0.00019296882
Shape:Irregular_coccus 0.00083591717
Shape:Rod 2.408e-16186347
Shape:Sphere 0.00360171819
Shape:Spiral 0.00001003334
Temp._range:Mesophilic 0.0040828303473



Back to top


ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 51
Effective number of orgs (counting one per cluster within 468 clusters): 40

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TPET390874 ncbi Thermotoga petrophila RKU-1 2.687e-683411
TMAR243274 ncbi Thermotoga maritima MSB8 2.947e-684111
SAGA211110 ncbi Streptococcus agalactiae NEM316 4.075e-686611
SAGA205921 ncbi Streptococcus agalactiae A909 4.288e-687011
LACI272621 ncbi Lactobacillus acidophilus NCFM 0.000019268410
CTET212717 ncbi Clostridium tetani E88 0.0000205100211
PSP117 Pirellula sp. 0.0000385106111
CNOV386415 ncbi Clostridium novyi NT 0.0000513108911
BXEN266265 ncbi Burkholderia xenovorans LB400 0.0000788113211
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 33223 0.0001487119911
SAGA208435 ncbi Streptococcus agalactiae 2603V/R 0.000204786910
TSP28240 Thermotoga sp. 0.000207187010
TSP1755 Thermoanaerobacter sp. 0.0002293124711
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B 0.0002314124811
LLAC272623 ncbi Lactococcus lactis lactis Il1403 0.000315690810
RXYL266117 ncbi Rubrobacter xylanophilus DSM 9941 0.0003540129711
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB4 0.0003725130311
CDIF272563 ncbi Clostridium difficile 630 0.0003986131111
CBOT515621 ncbi Clostridium botulinum Ba4 str. 657 0.0004829133411
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.000497795110
SCO ncbi Streptomyces coelicolor A3(2) 0.0011671144511
SERY405948 ncbi Saccharopolyspora erythraea NRRL 2338 0.0012405145311
BOVI236 Brucella ovis 0.0013380146311
SAVE227882 ncbi Streptomyces avermitilis MA-4680 0.0014643147511
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0017498149911
HINF374930 ncbi Haemophilus influenzae PittEE 0.0017757150111
BMEL359391 ncbi Brucella melitensis biovar Abortus 2308 0.0020402152011
BABO262698 ncbi Brucella abortus bv. 1 str. 9-941 0.0020550152111
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 15305 0.0022098110710
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00223128019
BSUI470137 ncbi Brucella suis ATCC 23445 0.0024777154711
HSOM228400 ncbi Haemophilus somnus 2336 0.0028753156811
BCAN483179 ncbi Brucella canis ATCC 23365 0.0029160157011
BSUI204722 ncbi Brucella suis 1330 0.0030413157611
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M 0.0030627157711
HINF281310 ncbi Haemophilus influenzae 86-028NP 0.0031058157911
BCER315749 ncbi Bacillus cytotoxicus NVH 391-98 0.0031938158311
BHAL272558 ncbi Bacillus halodurans C-125 0.0033531159011
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0035441159811
HINF71421 ncbi Haemophilus influenzae Rd KW20 0.0036937160411
GKAU235909 ncbi Geobacillus kaustophilus HTA426 0.0043220162711
BCLA66692 ncbi Bacillus clausii KSM-K16 0.0050124164911
BAMY326423 ncbi Bacillus amyloliquefaciens FZB42 0.0050799165111
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-2 0.0057635167011
BSUB ncbi Bacillus subtilis subtilis 168 0.0083463172711
VEIS391735 ncbi Verminephrobacter eiseniae EF01-2 0.0083463172711
BTHU412694 ncbi Bacillus thuringiensis Al Hakam 0.0088952173711
BCER288681 ncbi Bacillus cereus E33L 0.0092401174311
BLIC279010 ncbi Bacillus licheniformis ATCC 14580 0.0096578175011
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-27 0.0097803175211
AVAR240292 ncbi Anabaena variabilis ATCC 29413 0.0098345129010


Names of the homologs of the genes in the group in each of these orgs
  G7340   G6800   EG12520   EG12518   EG12517   EG12275   EG11959   EG11958   EG10816   EG10814   EG10592   
TPET390874 TPET_0812TPET_1792TPET_1793TPET_0809TPET_1794TPET_0809TPET_0809TPET_1793TPET_1793TPET_0809TPET_0809
TMAR243274 TM_0955TM_0956TM_0955TM_0956TM_0958TM_0956TM_0115TM_0955TM_0955TM_0956TM_0956
SAGA211110 GBS0114GBS0115GBS0114GBS0115GBS0113GBS0115GBS0115GBS0114GBS0114GBS0115GBS0115
SAGA205921 SAK_0167SAK_0168SAK_0167SAK_0168SAK_0166SAK_0168SAK_0168SAK_0167SAK_0167SAK_0168SAK_0168
LACI272621 LBA1483LBA1482LBA1483LBA1481LBA1483LBA1483LBA1482LBA1482LBA1483LBA1483
CTET212717 CTC_00906CTC_02350CTC_02349CTC_02350CTC_02347CTC_02350CTC_00905CTC_02349CTC_02349CTC_02350CTC_00861
PSP117 RB3497RB10181RB3497RB9385RB3493RB3496RB3496RB3497RB3497RB3496RB3496
CNOV386415 NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0164NT01CX_0162NT01CX_0164NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0164NT01CX_0164
BXEN266265 BXE_B1397BXE_C1350BXE_B1397BXE_C1350BXE_B0573BXE_B2620BXE_C1350BXE_B1397BXE_C1349BXE_C1350BXE_C1350
TPSE340099 TETH39_2039TETH39_2040TETH39_2039TETH39_2040TETH39_2038TETH39_2040TETH39_2040TETH39_2039TETH39_2039TETH39_2040TETH39_2040
SAGA208435 SAG_0115SAG_0116SAG_0115SAG_0114SAG_0116SAG_0116SAG_0115SAG_0115SAG_0116SAG_0116
TSP28240 TRQ2_0835TRQ2_0975TRQ2_0975TRQ2_0833TRQ2_0975TRQ2_0975TRQ2_0974TRQ2_0974TRQ2_0975TRQ2_0975
TSP1755 TETH514_0158TETH514_0164TETH514_0165TETH514_0164TETH514_0166TETH514_0157TETH514_0164TETH514_0165TETH514_0165TETH514_0164TETH514_0157
CBOT508765 CLL_A1530CLL_A1529CLL_A1530CLL_A1529CLL_A1531CLL_A1529CLL_A1529CLL_A1530CLL_A1530CLL_A1529CLL_A1529
LLAC272623 L83296L84240L83296L82310L84240L84240L83296L83296L84240L84240
RXYL266117 RXYL_1889RXYL_1684RXYL_3002RXYL_0946RXYL_0948RXYL_0946RXYL_3003RXYL_3002RXYL_0947RXYL_0946RXYL_0946
TTEN273068 TTE0205TTE0204TTE0205TTE0204TTE0206TTE0204TTE0763TTE0764TTE0205TTE0204TTE0763
CDIF272563 CD1588CD0301CD0302CD0301CD1589CD0301CD0301CD1588CD0302CD0301CD0301
CBOT515621 CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1312CLJ_B1315CLJ_B1312CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1312CLJ_B1312
LCAS321967 LSEI_0309LSEI_0308LSEI_0309LSEI_0308LSEI_0310LSEI_0308LSEI_0309LSEI_0309LSEI_0308LSEI_0308
SCO SCO2747SCO6567SCO6568SCO2746SCO2747SCO2405SCO2405SCO2747SCO2747SCO2746SCO2746
SERY405948 SACE_5660SACE_5659SACE_2988SACE_5659SACE_5660SACE_5659SACE_5659SACE_1882SACE_5660SACE_5659SACE_5659
BOVI236 GBOORF1646GBOORF0569GBOORF1646GBOORFA0965GBOORF1645GBOORFA0965GBOORFA0965GBOORF1646GBOORF1646GBOORF1647GBOORF1647
SAVE227882 SAV1827SAV7416SAV1827SAV970SAV971SAV5768SAV7416SAV5318SAV5318SAV7416SAV5319
OIHE221109 OB2573OB2574OB2573OB2574OB2572OB2574OB2574OB2573OB2573OB2574OB2574
HINF374930 CGSHIEE_06515CGSHIEE_00480CGSHIEE_00475CGSHIEE_00480CGSHIEE_00470CGSHIEE_00480CGSHIEE_07945CGSHIEE_00475CGSHIEE_00475CGSHIEE_00480CGSHIEE_07945
BMEL359391 BAB1_1649BAB1_0565BAB1_1649BAB2_0299BAB1_1648BAB2_1110BAB2_0299BAB1_1649BAB1_1649BAB2_1110BAB2_1110
BABO262698 BRUAB1_1619BRUAB1_0564BRUAB1_1619BRUAB2_0297BRUAB1_1618BRUAB2_1088BRUAB2_0297BRUAB1_1619BRUAB1_1619BRUAB2_1088BRUAB2_1088
SSAP342451 SSP1393SSP1394SSP1393SSP1394SSP1392SSP1394SSP1393SSP1393SSP1394SSP1394
PMOB403833 PMOB_1602PMOB_0637PMOB_0922PMOB_1601PMOB_0923PMOB_0921PMOB_1601PMOB_1602PMOB_0922
BSUI470137 BSUIS_A1690BSUIS_A0571BSUIS_A1690BSUIS_B0929BSUIS_A1689BSUIS_B0929BSUIS_B0929BSUIS_A1690BSUIS_A1690BSUIS_A1691BSUIS_A1691
HSOM228400 HSM_0091HSM_1944HSM_0822HSM_0431HSM_0092HSM_0934HSM_0557HSM_0558HSM_0091HSM_0090HSM_0104
BCAN483179 BCAN_A1668BCAN_A0554BCAN_A1668BCAN_B0956BCAN_A1667BCAN_B1180BCAN_B0956BCAN_A1668BCAN_A1668BCAN_A1669BCAN_B1180
BSUI204722 BR_1631BR_0542BR_1631BR_A0936BR_1630BR_A1151BR_A0936BR_1631BR_1631BR_1632BR_A1151
BMEL224914 BMEI0392BMEI1392BMEI0392BMEII0361BMEI0393BMEII0145BMEII0361BMEI0392BMEI0392BMEII0145BMEII0145
HINF281310 NTHI0631NTHI0630NTHI0631NTHI0630NTHI0632NTHI0630NTHI0630NTHI0631NTHI0631NTHI0630NTHI0988
BCER315749 BCER98_0563BCER98_0562BCER98_0563BCER98_0562BCER98_0564BCER98_0562BCER98_0562BCER98_0563BCER98_0563BCER98_0562BCER98_0562
BHAL272558 BH3731BH3730BH2321BH3730BH3732BH3441BH3730BH3731BH3731BH3730BH2322
BPUM315750 BPUM_3267BPUM_3266BPUM_3267BPUM_3266BPUM_3268BPUM_3266BPUM_3266BPUM_3267BPUM_3267BPUM_3266BPUM_3266
HINF71421 HI_0503HI_0502HI_0503HI_0502HI_0504HI_1110HI_0823HI_0503HI_0503HI_0502HI_0823
GKAU235909 GK3227GK3228GK1893GK3228GK3226GK1880GK3228GK3227GK3227GK3228GK1894
BCLA66692 ABC3545ABC3546ABC3545ABC3546ABC3544ABC0410ABC3546ABC3545ABC3545ABC3546ABC3546
BAMY326423 RBAM_033120RBAM_033110RBAM_033120RBAM_033110RBAM_033130RBAM_033110RBAM_033110RBAM_033120RBAM_033120RBAM_033110RBAM_033110
GTHE420246 GTNG_3171GTNG_3172GTNG_3171GTNG_3172GTNG_3170GTNG_1800GTNG_3172GTNG_3171GTNG_3171GTNG_3172GTNG_3172
BSUB BSU35950BSU35940BSU35950BSU35940BSU35960BSU35940BSU35940BSU35950BSU35950BSU35940BSU35940
VEIS391735 VEIS_3417VEIS_2120VEIS_2045VEIS_2025VEIS_2026VEIS_0738VEIS_1088VEIS_2045VEIS_2045VEIS_1088VEIS_0061
BTHU412694 BALH_0611BALH_2664BALH_0611BALH_0609BALH_0612BALH_0609BALH_0609BALH_0611BALH_0611BALH_0609BALH_0609
BCER288681 BCE33L0578BCE33L2696BCE33L0578BCE33L0577BCE33L0579BCE33L0577BCE33L0577BCE33L0578BCE33L0578BCE33L0577BCE33L0577
BLIC279010 BL02442BL02441BL02442BL02441BL02443BL01747BL02441BL02442BL02442BL02441BL02441
BTHU281309 BT9727_0579BT9727_2716BT9727_0579BT9727_0578BT9727_0580BT9727_0578BT9727_0578BT9727_0579BT9727_0579BT9727_0578BT9727_0578
AVAR240292 AVA_2173AVA_2172AVA_2173AVA_2172AVA_2172AVA_2172AVA_2173AVA_2173AVA_2172AVA_2172


Organism features enriched in list (features available for 47 out of the 51 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00020841792
Arrangment:Filaments 0.0049380410
Arrangment:Groups 0.006371822
Disease:Brucellosis 2.780e-655
Disease:Sotto_disease 0.006371822
Disease:and_meningitis 0.006371822
Disease:chronic_bronchitis 0.000493533
Disease:fever 0.006371822
Disease:otitis_media 0.001824334
Disease:septicemia 0.001824334
Disease:sinusitis 0.001824334
Disease:speticemia 0.006371822
Endospores:Yes 5.142e-122153
GC_Content_Range7:60-70 0.00030632134
GC_Content_Range7:70-100 0.0071774411
Genome_Size_Range5:2-4 0.002106225197
Genome_Size_Range9:3-4 0.00313691377
Genome_Size_Range9:8-10 0.003202749
Gram_Stain:Gram_Neg 0.000514816333
Gram_Stain:Gram_Pos 4.476e-829150
Habitat:Terrestrial 0.0015130831
Shape:Branched_filament 0.001824334



Back to top


ORGANISMS DEPLETED FOR GROUP:




Back to top


PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTITOLCAT-PWY (galactitol degradation)73640.5267
PWY-6196 (serine racemization)102760.5052
GLUTAMINDEG-PWY (glutamine degradation I)1911080.4835
XYLCAT-PWY (xylose degradation I)2171150.4717
PWY-6374 (vibriobactin biosynthesis)77610.4696
RIBOKIN-PWY (ribose degradation)2791320.4630
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121790.4561
GLUCUROCAT-PWY (β-D-glucuronide and D-glucuronate degradation)2081090.4471
GLUTDEG-PWY (glutamate degradation II)1941030.4354
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50420.4020



Back to top


PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6800   EG12520   EG12518   EG12517   EG12275   EG11959   EG11958   EG10816   EG10814   EG10592   
G73400.9993030.9995550.9993870.9995280.9993210.9994260.9996810.9996660.9995270.999305
G68000.9994190.9995240.9994370.9994210.9995940.999530.9995430.9996610.999461
EG125200.9997580.9997540.9993970.9994480.9996960.9996560.9995290.999391
EG125180.9997550.9994960.9995720.9996110.9996170.9996220.999528
EG125170.9993480.999420.9996180.9996140.9995580.999366
EG122750.9994520.999470.9995260.9996310.999466
EG119590.999590.9995530.9996740.999674
EG119580.9997910.9996370.999462
EG108160.9997110.999517
EG108140.999669
EG10592



Back to top


PAIRWISE BLAST SCORES:

  G7340   G6800   EG12520   EG12518   EG12517   EG12275   EG11959   EG11958   EG10816   EG10814   EG10592   
G73400.0f0-------1.9e-33--
G6800-0.0f0----3.3e-75--3.2e-77-
EG125201.2e-22-0.0f0-----4.3e-27--
EG12518---0.0f0-1.2e-8---2.9e-601.2e-8
EG12517----0.0f0------
EG12275-----0.0f0---3.0e-1131.9e-102
EG11959------0.0f0--4.0e-952.1e-96
EG11958-------0.0f06.9e-43--
EG10816--------0.0f0--
EG10814-----3.0e-113---0.0f02.7e-112
EG10592-----8.0e-97---1.4e-1080.0f0



Back to top


PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-42-CPLX (D-allose ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.182, average score: 0.993)
  Genes in pathway or complex:
             0.7676 0.0887 EG12458 (alsB) YJCX-MONOMER (AlsB)
   *in cand* 0.9996 0.9995 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9996 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10592 (mglA) MGLA-MONOMER (MglA)
   *in cand* 0.9997 0.9995 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9995 0.9993 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9996 0.9993 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9994 EG12518 (ytfR) YTFR-MONOMER (YtfR)
   *in cand* 0.9996 0.9994 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9995 0.9993 G6800 (lsrA) YDEX-MONOMER (LsrA)
   *in cand* 0.9995 0.9993 G7340 (yphD) YPHD-MONOMER (YphD)

- ABC-28-CPLX (ribose ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.182, average score: 1.000)
  Genes in pathway or complex:
             0.9995 0.9993 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9997 0.9995 EG10814 (rbsA) RBSA-MONOMER (RbsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10592 (mglA) MGLA-MONOMER (MglA)
   *in cand* 0.9996 0.9995 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9996 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9995 0.9993 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9996 0.9993 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9994 EG12518 (ytfR) YTFR-MONOMER (YtfR)
   *in cand* 0.9996 0.9994 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9995 0.9993 G6800 (lsrA) YDEX-MONOMER (LsrA)
   *in cand* 0.9995 0.9993 G7340 (yphD) YPHD-MONOMER (YphD)

- ABC-46-CPLX (galactose ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.273, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9993 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9994 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9996 0.9994 EG12518 (ytfR) YTFR-MONOMER (YtfR)
             0.9995 0.9992 EG12439 (yjfF) YJFF-MONOMER (YjfF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10592 (mglA) MGLA-MONOMER (MglA)
   *in cand* 0.9997 0.9995 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9996 0.9995 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9996 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9995 0.9993 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9995 0.9993 G6800 (lsrA) YDEX-MONOMER (LsrA)
   *in cand* 0.9995 0.9993 G7340 (yphD) YPHD-MONOMER (YphD)



Back to top


GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12517 EG12518 EG12520 (centered at EG12518)
EG10814 EG10816 (centered at EG10816)
G7340 (centered at G7340)
G6800 (centered at G6800)
EG12275 (centered at EG12275)
EG10592 (centered at EG10592)
EG11958 EG11959 (centered at EG11959)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7340   G6800   EG12520   EG12518   EG12517   EG12275   EG11959   EG11958   EG10816   EG10814   EG10592   
163/623187/623192/623202/623198/623192/623183/623194/623177/623176/623179/623
AAUR290340:2:Tyes-150501505515851-0517--
AAVE397945:0:Tyes-19090153-----
ABAC204669:0:Tyes-1-1-1-0-11
ACAU438753:0:Tyes-0103-01--0
ACEL351607:0:Tyes0----------
ACRY349163:8:Tyes--173517361717--0560--
AHYD196024:0:Tyes10102001101690
AMET293826:0:Tyes023060128-23061281291292306128
APLE416269:0:Tyes27227127227127351802722722710
APLE434271:0:Tno27227127227127353502722722710
ASAL382245:5:Tyes1699-186118621863001699169921100
ASP1667:3:Tyes734733734815-0-734734-815
AVAR240292:3:Tyes1010-001100
BABO262698:0:Tno---0-7440--744744
BABO262698:1:Tno101801018-1017--10181018--
BAMB339670:1:Tno143-210142-----
BAMB339670:2:Tno------24600246-
BAMB339670:3:Tno-0--------0
BAMB398577:1:Tno--210110-----
BAMB398577:2:Tno------23800--
BAMB398577:3:Tno430-------131131
BAMY326423:0:Tyes10102001100
BANT260799:0:Tno12136102001100
BANT261594:2:Tno12113102001100
BANT568206:2:Tyes22430224322442242224422442243224322442244
BANT592021:2:Tno12233102001100
BCAN483179:0:Tno---0-2150---215
BCAN483179:1:Tno107801078-1077--107810781079-
BCEN331271:0:Tno--012885-----
BCEN331271:1:Tno1876-----0221221--
BCEN331271:2:Tno-0-------00
BCEN331272:1:Tyes--012744-----
BCEN331272:2:Tyes820-----22100--
BCEN331272:3:Tyes-0-------00
BCER226900:1:Tyes1010-001100
BCER288681:0:Tno12124102001100
BCER315749:1:Tyes10102001100
BCER405917:1:Tyes12141102001100
BCER572264:1:Tno12297102001100
BCLA66692:0:Tyes31743175317431753173031753174317431753175
BFRA272559:1:Tyes----0------
BFRA295405:0:Tno----0------
BHAL272558:0:Tyes14251424014241426113514241425142514241
BJAP224911:0:Fyes046972094209320922101115915680-1569
BLIC279010:0:Tyes33013300330133003302033003301330133003300
BLON206672:0:Tyes--2101649-----
BMAL243160:1:Tno--01--1001149-
BMAL320388:0:Tno----0------
BMAL320388:1:Tno--12111212--1212121112110-
BMAL320389:0:Tyes----0------
BMAL320389:1:Tyes--10--0112393-
BMEL224914:0:Tno---227-0227--00
BMEL224914:1:Tno010230-1--00--
BMEL359391:0:Tno---0-7400--740740
BMEL359391:1:Tno9830983-982--983983--
BOVI236:0:Tyes---0-00----
BOVI236:1:Tyes9240924-923--924924925925
BPSE272560:0:Tyes-10-11611--11
BPSE272560:1:Tyes---1198---00--
BPSE320372:0:Tno-10-15711--11
BPSE320372:1:Tno---0---11--
BPSE320373:0:Tno-0169-17000--00
BPSE320373:1:Tno---0---11--
BPUM315750:0:Tyes10102001100
BSP36773:1:Tyes0--23232324-577840840--
BSP36773:2:Tyes-0114--115---00
BSP376:0:Tyes-403139439339240304043940-
BSUB:0:Tyes10102001100
BSUI204722:0:Tyes---0-2020---202
BSUI204722:1:Tyes105901059-1058--105910591060-
BSUI470137:0:Tno---0-00----
BSUI470137:1:Tno108401084-1083--1084108410851085
BTHA271848:0:Tno-0-------01410
BTHA271848:1:Tno93-4320949393--
BTHE226186:0:Tyes----0------
BTHU281309:1:Tno12116102001100
BTHU412694:1:Tno11970102001100
BVIE269482:5:Tyes--1001011020-----
BVIE269482:6:Tyes452-------0--
BVIE269482:7:Tyes-0----0117-00
BWEI315730:4:Tyes12149102001100
BXEN266265:0:Tyes-1-1--1-011
BXEN266265:1:Tyes1201-1201-20110-1201---
CACE272562:1:Tyes----0------
CAULO:0:Tyes21-10-122--
CBEI290402:0:Tyes-253520302031203202535--25352003
CBOT508765:1:Tyes10102001100
CBOT515621:2:Tyes10103001100
CDIF272563:1:Tyes13200101321001320100
CGLU196627:0:Tyes1-102-011-0
CHYD246194:0:Tyes---0-------
CJAP155077:0:Tyes--210------
CMIC31964:2:Tyes---0-830-----
CMIC443906:2:Tyes--012841-----
CNOV386415:0:Tyes12120221122
CPER195102:1:Tyes-2892880-2892892882882890
CPER195103:0:Tno-3233220-3233233223223230
CPER289380:3:Tyes-253-0251253253--2530
CPHY357809:0:Tyes-1-1-18680-8681097
CSAL290398:0:Tyes0-06811--00-681
CSP501479:2:Fyes0----------
CSP501479:4:Fyes-0---------
CSP501479:7:Fyes---0-0-----
CTET212717:0:Tyes4013661365136613641366391365136513660
CVIO243365:0:Tyes12120221122
DGEO319795:0:Tyes2790-0160-0-27900
DRED349161:0:Tyes-21-02-1122
DSHI398580:5:Tyes---1--10-1-
ECAR218491:0:Tyes104291429242939001477100
ECOL199310:0:Tno3791964260326022601167823732372196519640
ECOL316407:0:Tno1037027002699269821852556255519961997640
ECOL331111:6:Tno107402961296029592262706246124612460706
ECOL362663:0:Tno3571758227822772276148221281159148317580
ECOL364106:1:Tno4431872239323922391167622411873187318720
ECOL405955:2:Tyes4261700227622752274152820702069170117000
ECOL409438:6:Tyes1249030073006300522822853285224802479824
ECOL413997:0:Tno3651573206220612060157319201919157415730
ECOL439855:4:Tno1025029432942294121652793279223902389631
ECOL469008:0:Tno0313926382639264031392780278131383139374
ECOL481805:0:Tno10002006364736483649038053806413441351371
ECOL585034:0:Tno106202869286828672173693237023702369693
ECOL585035:0:Tno4141825243124302429164322131826182618250
ECOL585055:0:Tno116503077307630752334739252925292528739
ECOL585056:2:Tno109002971297029692294705249124912490705
ECOL585057:0:Tno4532072242224212420180222402239207320720
ECOL585397:0:Tno3751805242724262425180521872186180618050
ECOL83334:0:Tno132303182318131802391943304326342633943
ECOLI:0:Tno1063027672766276520922622262122822281654
ECOO157:0:Tno14990332833273326258411193184282228211119
EFER585054:1:Tyes2466027152714271324652691269224662465665
ESP42895:1:Tyes38683280129128127110386838692480
FNOD381764:0:Tyes-----0-----
FNUC190304:0:Tyes-----00--00
GFOR411154:0:Tyes----0------
GKAU235909:1:Tyes1372137313137313710137313721372137314
GTHE420246:1:Tyes13561357135613571355013571356135613571357
GVIO251221:0:Tyes9361936-0--936936--
HAUR316274:2:Tyes155010131549-1550---
HCHE349521:0:Tyes-1125412530111254125411
HINF281310:0:Tyes1010200110336
HINF374930:0:Tyes10542120213101121310
HINF71421:0:Tno10102595318110318
HMOD498761:0:Tyes-01020-1100
HSOM205914:1:Tyes5390152715281529540721539722-1528
HSOM228400:0:Tno1187374334428614764771014
JSP290400:1:Tyes505501-501500-501502-0501
KPNE272620:2:Tyes1593955205220512050138029661593159315920
KRAD266940:2:Fyes022780307913079-0---
LACI272621:0:Tyes-2120221122
LCAS321967:1:Tyes10102-01100
LCHO395495:0:Tyes-10950109510969811095980109410951095
LLAC272622:5:Tyes-1-1011--11
LLAC272623:0:Tyes121-0221122
LXYL281090:0:Tyes---180918080-----
MHYO262719:0:Tyes-----0-----
MHYO262722:0:Tno-----0-----
MHYO295358:0:Tno-----0-----
MLOT266835:2:Tyes1305552822004036193658872475320043619
MMOB267748:0:Tyes-----0-----
MPUL272635:0:Tyes-----0-----
MSME246196:0:Tyes227924485670-24492449--
MSP164756:1:Tno--230--2---
MSP164757:0:Tno-3230--2---
MSP189918:2:Tyes--230--2---
MSP266779:3:Tyes-288428857832883028842885--0
MSP400668:0:Tyes8016991700170171261274127-126
MSUC221988:0:Tyes141-1410160306031411410603
MTHE264732:0:Tyes1-1075137401100
NSP35761:1:Tyes-3240-3240-311-0---
OANT439375:4:Tyes-59---68-71671600
OANT439375:5:Tyes0-114811491150-1----
OIHE221109:0:Tyes12120221122
PACN267747:0:Tyes1-102--11-0
PAER208963:0:Tyes----0------
PAER208964:0:Tno----0------
PDIS435591:0:Tyes----0------
PENT384676:0:Tyes----0------
PFLU205922:0:Tyes---385038512231-22322232
PFLU216595:1:Tyes-7872651638263078716371637264264
PFLU220664:0:Tyes-1210112211
PING357804:0:Tyes10231123122001100
PINT246198:1:Tyes----0------
PLUM243265:0:Fyes13149102001100
PMOB403833:0:Tyes9440285943286284943944285--
PMUL272843:1:Tyes1112112252021173112886
PNAP365044:8:Tyes--0----0---
PPRO298386:1:Tyes10841083108401085-13971084108410831397
PPRO298386:2:Tyes-----0-----
PRUM264731:0:Tyes----0------
PSP117:0:Tyes33777333370223322
PSP296591:2:Tyes--0----0---
PSYR205918:0:Tyes0694069469531269400694694
PSYR223283:2:Tyes-106801068106959210681067106710681068
RCAS383372:0:Tyes---17700------
RDEN375451:4:Tyes---01282-20822081-2082-
RETL347834:0:Tyes-0----0----
RETL347834:4:Tyes--------0--
RETL347834:5:Tyes1961-8738728711936-0-27512751
REUT264198:3:Tyes-101-110011
REUT381666:1:Tyes-010-00110-
RFER338969:1:Tyes0-02690-269026900269126902690
RLEG216596:2:Tyes0----------
RLEG216596:6:Tyes-70363263163018637030029012901
RRUB269796:1:Tyes010----00--
RSAL288705:0:Tyes0----1-----
RSOL267608:0:Tyes1----0-----
RSOL267608:1:Tyes-0241240239-240-241240240
RSP101510:2:Fyes---0-------
RSP101510:3:Fyes032510---3251003251-
RSP357808:0:Tyes-0-01741-0--00
RSPH272943:3:Tyes1930193--------
RSPH349101:1:Tno2700270--------
RSPH349102:5:Tyes-2426--0------
RXYL266117:0:Tyes946752204702020482047100
SAGA205921:0:Tno12120221122
SAGA208435:0:Tno121-0221122
SAGA211110:0:Tyes12120221122
SAVE227882:1:Fyes862653486201487065344412441265344413
SBOY300268:1:Tyes372-19348971935133201510151013320
SCO:2:Fyes3494197419834834900349349348348
SDEG203122:0:Tyes-1210------
SDYS300267:1:Tyes2685280629172916--2806268526850-
SENT209261:0:Tno860868785878786868787
SENT220341:0:Tno870878886888887878888
SENT295319:0:Tno-186-0100--00
SENT321314:2:Tno10102001100
SENT454169:2:Tno17331901173317321734173217321733173317320
SERY405948:0:Tyes36643663107736633664366336630366436633663
SFLE198214:0:Tyes9460259325942595194560221582158602602
SFLE373384:0:Tno970025582559-2286612206920692286612
SGLO343509:3:Tyes0-0359135935900359359
SHAE279808:0:Tyes101-2-01100
SHAL458817:0:Tyes101484-2014831100
SHIGELLA:0:Tno880024872488-215052919451945529529
SMED366394:1:Tyes-------0---
SMED366394:2:Tyes984541111311121111694985-0-492
SMED366394:3:Tyes---------0-
SMEL266834:1:Tyes615255691690689850616-0-1083
SMEL266834:2:Tyes-------0-623-
SPEA398579:0:Tno10183902018401100
SPRO399741:1:Tyes420196347464747474809634889488948901511
SSAP342451:2:Tyes12120-21122
SSON300269:1:Tyes4081631208520842083163101632163216310
SSP292414:1:Tyes-------0---
SSP292414:2:Tyes-0---00----
SSP644076:3:Fyes-----0-----
SSP644076:4:Fyes110110--011--
SSP94122:1:Tyes--210------
STHE292459:0:Tyes-1--2110-11
STYP99287:1:Tyes16851873168516841686168416841685168516840
SWOL335541:0:Tyes-0---------
TDEN243275:0:Tyes------0---0
TERY203124:0:Tyes---0-0----0
TLET416591:0:Tyes--115602051155-1115611551155
TMAR243274:0:Tyes8228238228238258230822822823823
TPAL243276:0:Tyes----------0
TPET390874:0:Tno398598609870098698600
TPSE340099:0:Tyes12120221122
TROS309801:0:Tyes-181-0-00180-00
TSP1755:0:Tyes17879078870
TSP28240:0:Tyes2140-1400140140139139140140
TTEN273068:0:Tyes10102053053110530
TWHI203267:0:Tyes-----0-----
TWHI218496:0:Tno-----0-----
VCHO:0:Tyes------0---0
VCHO:1:Fyes101020-110-
VCHO345073:0:Tno121202-112-
VCHO345073:1:Tno------0---0
VEIS391735:1:Tyes3329203719641946194766910221964196410220
VFIS312309:2:Tyes10102001100
VPAR223926:0:Tyes1215890221122
VVUL196600:1:Tyes41641541641541741504164164150
VVUL216895:0:Tno10102001101182
XAUT78245:1:Tyes----0------
YENT393305:1:Tyes1525143142141401827141102714
YPES187410:5:Tno35783475210376730533578138623542354
YPES214092:3:Tno3431033723373337434985183431200810571057
YPES349746:2:Tno3829667304303302388703829154627722772
YPES360102:3:Tyes37383821210407819637381913706706
YPES377628:2:Tno3625236210369831613625207424602460
YPES386656:2:Tno277826692972297329743246027781356906906
YPSE273123:2:Tno3716443210379631503716244514341434
YPSE349747:2:Tno3838333721039076553838134522952295



Back to top