CANDIDATE ID: 23

CANDIDATE ID: 23

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9967896e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.4545455e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7306 (hyfI) (b2489)
   Products of gene:
     - MONOMER0-151 (hydrogenase 4, small subunit)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- G7304 (hyfG) (b2487)
   Products of gene:
     - MONOMER0-150 (hydrogenase 4, large subunit)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- G7303 (hyfF) (b2486)
   Products of gene:
     - MONOMER0-143 (hydrogenase 4, component F)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- EG12093 (nuoN) (b2276)
   Products of gene:
     - NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12092 (nuoL) (b2278)
   Products of gene:
     - NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG12088 (nuoH) (b2282)
   Products of gene:
     - NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG11773 (nuoM) (b2277)
   Products of gene:
     - NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
     - NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I)
       Reactions:
        a ubiquinone + NADH + H+  ->  a ubiquinol + NAD+
         In pathways
         PWY-4302 (PWY-4302)
         PWY-3781 (PWY-3781)
         PWY-5083 (PWY-5083)
         PWY0-1334 (NADH to cytochrome bd oxidase electron transfer)
         PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)
        NADH + a menaquinone + H+  ->  a menaquinol + NAD+
         In pathways
         PWY0-1336 (NADH to fumarate electron transfer)
         PWY0-1352 (NADH to nitrate electron transfer)
         PWY0-1347 (NADH to trimethylamine N-oxide electron transfer)
         PWY0-1348 (NADH to dimethyl sulfoxide electron transfer)

- EG10480 (hycG) (b2719)
   Products of gene:
     - HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10479 (hycF) (b2720)
   Products of gene:
     - HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10478 (hycE) (b2721)
   Products of gene:
     - HYCELARGE-MONOMER (hydrogenase 3, large subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10477 (hycD) (b2722)
   Products of gene:
     - HYCD-MONOMER (hydrogenase 3, membrane subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 196
Effective number of orgs (counting one per cluster within 468 clusters): 138

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175810
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295310
YPES386656 ncbi Yersinia pestis Pestoides F10
YPES377628 ncbi Yersinia pestis Nepal51610
YPES360102 ncbi Yersinia pestis Antiqua10
YPES349746 ncbi Yersinia pestis Angola10
YPES214092 ncbi Yersinia pestis CO9210
YPES187410 ncbi Yersinia pestis KIM 1010
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
XAUT78245 ncbi Xanthobacter autotrophicus Py211
WSUC273121 ncbi Wolinella succinogenes DSM 174011
WPIP955 Wolbachia pipientis10
WPIP80849 Wolbachia endosymbiont of Brugia malayi10
TTHE300852 ncbi Thermus thermophilus HB89
TTHE262724 ncbi Thermus thermophilus HB279
TROS309801 ncbi Thermomicrobium roseum DSM 51599
TPEN368408 ncbi Thermofilum pendens Hrk 59
TERY203124 ncbi Trichodesmium erythraeum IMS1019
TELO197221 ncbi Thermosynechococcus elongatus BP-110
TCRU317025 ncbi Thiomicrospira crunogena XCL-210
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT210
STRO369723 ncbi Salinispora tropica CNB-44010
SSP387093 ncbi Sulfurovum sp. NBC37-111
SSON300269 ncbi Shigella sonnei Ss04611
SPRO399741 ncbi Serratia proteamaculans 56811
SMEL266834 ncbi Sinorhizobium meliloti 102110
SMED366394 ncbi Sinorhizobium medicae WSM41911
SHIGELLA ncbi Shigella flexneri 2a str. 2457T11
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB9
SFLE373384 ncbi Shigella flexneri 5 str. 840111
SFLE198214 ncbi Shigella flexneri 2a str. 30111
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23389
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47610
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6710
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915010
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1810
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty210
SDYS300267 ncbi Shigella dysenteriae Sd19711
SCO ncbi Streptomyces coelicolor A3(2)10
SBOY300268 ncbi Shigella boydii Sb22711
SAVE227882 ncbi Streptomyces avermitilis MA-468010
SARE391037 ncbi Salinispora arenicola CNS-20510
RTYP257363 ncbi Rickettsia typhi Wilmington10
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170259
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 1702910
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.110
RSP357808 ncbi Roseiflexus sp. RS-111
RRUB269796 ncbi Rhodospirillum rubrum ATCC 1117011
RRIC452659 ncbi Rickettsia rickettsii Iowa9
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith9
RPRO272947 ncbi Rickettsia prowazekii Madrid E10
RPAL316058 ncbi Rhodopseudomonas palustris HaA211
RPAL316057 ncbi Rhodopseudomonas palustris BisB511
RPAL316056 ncbi Rhodopseudomonas palustris BisB1811
RPAL316055 ncbi Rhodopseudomonas palustris BisA5311
RPAL258594 ncbi Rhodopseudomonas palustris CGA00910
RMET266264 ncbi Ralstonia metallidurans CH3410
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384111
RFER338969 ncbi Rhodoferax ferrireducens T11811
RFEL315456 ncbi Rickettsia felis URRWXCal210
REUT381666 ncbi Ralstonia eutropha H1611
RETL347834 ncbi Rhizobium etli CFN 429
RCON272944 ncbi Rickettsia conorii Malish 79
RCAS383372 ncbi Roseiflexus castenholzii DSM 1394110
RCAN293613 ncbi Rickettsia canadensis McKiel10
RBEL391896 ncbi Rickettsia bellii OSU 85-38910
RBEL336407 ncbi Rickettsia bellii RML369-C10
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30009
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a9
PSP56811 Psychrobacter sp.10
PSP296591 ncbi Polaromonas sp. JS66610
PPUT76869 ncbi Pseudomonas putida GB-19
PPUT351746 ncbi Pseudomonas putida F19
PPUT160488 ncbi Pseudomonas putida KT24409
PMEN399739 ncbi Pseudomonas mendocina ymp9
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP137510
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO19
PENT384676 ncbi Pseudomonas entomophila L489
PCRY335284 ncbi Psychrobacter cryohalolentis K510
PCAR338963 ncbi Pelobacter carbinolicus DSM 23809
PARC259536 ncbi Psychrobacter arcticus 273-411
PAER208964 ncbi Pseudomonas aeruginosa PAO19
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA149
OANT439375 ncbi Ochrobactrum anthropi ATCC 491889
NSP387092 ncbi Nitratiruptor sp. SB155-211
NSP35761 Nocardioides sp.11
NSEN222891 ncbi Neorickettsia sennetsu Miyayama10
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970711
NMUL323848 ncbi Nitrosospira multiformis ATCC 2519611
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra10
MTUB336982 ncbi Mycobacterium tuberculosis F1110
MTHE349307 ncbi Methanosaeta thermophila PT10
MTHE264732 ncbi Moorella thermoacetica ATCC 3907311
MTBRV ncbi Mycobacterium tuberculosis H37Rv10
MTBCDC ncbi Mycobacterium tuberculosis CDC155110
MSP266779 ncbi Chelativorans sp. BNC19
MMAZ192952 ncbi Methanosarcina mazei Go111
MMAG342108 ncbi Magnetospirillum magneticum AMB-110
MLOT266835 ncbi Mesorhizobium loti MAFF3030999
MEXT419610 ncbi Methylobacterium extorquens PA19
MCAP243233 ncbi Methylococcus capsulatus Bath11
MBUR259564 ncbi Methanococcoides burtonii DSM 624210
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P210
MBOV233413 ncbi Mycobacterium bovis AF2122/9710
MBAR269797 ncbi Methanosarcina barkeri Fusaro10
MAVI243243 ncbi Mycobacterium avium 10411
MACE188937 ncbi Methanosarcina acetivorans C2A11
LCHO395495 ncbi Leptothrix cholodnii SP-69
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857810
JSP290400 ncbi Jannaschia sp. CCS19
HMOD498761 ncbi Heliobacterium modesticaldum Ice110
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237799
GVIO251221 ncbi Gloeobacter violaceus PCC 74219
GURA351605 ncbi Geobacter uraniireducens Rf411
GSUL243231 ncbi Geobacter sulfurreducens PCA11
GMET269799 ncbi Geobacter metallireducens GS-1511
GBET391165 ncbi Granulibacter bethesdensis CGDNIH19
ESP42895 Enterobacter sp.10
EFER585054 ncbi Escherichia fergusonii ATCC 3546911
ECOO157 ncbi Escherichia coli O157:H7 EDL93311
ECOL83334 Escherichia coli O157:H711
ECOL585397 ncbi Escherichia coli ED1a10
ECOL585057 ncbi Escherichia coli IAI3911
ECOL585056 ncbi Escherichia coli UMN02611
ECOL585055 ncbi Escherichia coli 5598911
ECOL585035 ncbi Escherichia coli S8810
ECOL585034 ncbi Escherichia coli IAI111
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL413997 ncbi Escherichia coli B str. REL60611
ECOL409438 ncbi Escherichia coli SE1111
ECOL405955 ncbi Escherichia coli APEC O110
ECOL364106 ncbi Escherichia coli UTI8910
ECOL362663 ncbi Escherichia coli 53610
ECOL331111 ncbi Escherichia coli E24377A10
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
ECOL199310 ncbi Escherichia coli CFT07310
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104311
ECAN269484 ncbi Ehrlichia canis Jake10
DSP255470 ncbi Dehalococcoides sp. CBDB111
DSP216389 ncbi Dehalococcoides sp. BAV111
DPSY177439 ncbi Desulfotalea psychrophila LSv5410
DHAF138119 ncbi Desulfitobacterium hafniense Y5111
DETH243164 ncbi Dehalococcoides ethenogenes 19511
CTEP194439 ncbi Chlorobium tepidum TLS10
CSAL290398 ncbi Chromohalobacter salexigens DSM 30439
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)9
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE259
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-290110
CFET360106 ncbi Campylobacter fetus fetus 82-4010
CCUR360105 ncbi Campylobacter curvus 525.9211
CCON360104 ncbi Campylobacter concisus 1382611
CCHL340177 ncbi Chlorobium chlorochromatii CaD310
CBEI290402 ncbi Clostridium beijerinckii NCIMB 805210
BVIE269482 ncbi Burkholderia vietnamiensis G49
BTRI382640 ncbi Bartonella tribocorum CIP 1054769
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-548210
BTHA271848 ncbi Burkholderia thailandensis E26411
BSUI470137 ncbi Brucella suis ATCC 234459
BSUI204722 ncbi Brucella suis 13309
BSP36773 Burkholderia sp.9
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)9
BQUI283165 ncbi Bartonella quintana Toulouse9
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b10
BPSE272560 ncbi Burkholderia pseudomallei K9624310
BMEL359391 ncbi Brucella melitensis biovar Abortus 23089
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M9
BMAL320389 ncbi Burkholderia mallei NCTC 102479
BMAL320388 ncbi Burkholderia mallei SAVP19
BMAL243160 ncbi Burkholderia mallei ATCC 2334410
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11011
BHEN283166 ncbi Bartonella henselae Houston-19
BCEN331272 ncbi Burkholderia cenocepacia HI24249
BCEN331271 ncbi Burkholderia cenocepacia AU 10549
BCAN483179 ncbi Brucella canis ATCC 233659
BBAC360095 ncbi Bartonella bacilliformis KC5839
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1009
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)9
BAMB398577 ncbi Burkholderia ambifaria MC40-69
BAMB339670 ncbi Burkholderia ambifaria AMMD9
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9419
ASP76114 ncbi Aromatoleum aromaticum EbN110
ASP62977 ncbi Acinetobacter sp. ADP111
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44911
APHA212042 ncbi Anaplasma phagocytophilum HZ10
AMAR329726 ncbi Acaryochloris marina MBIC110179
AHYD196024 Aeromonas hydrophila dhakensis11
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327011
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C11
ACRY349163 ncbi Acidiphilium cryptum JF-511
ACEL351607 ncbi Acidothermus cellulolyticus 11B11
ACAU438753 ncbi Azorhizobium caulinodans ORS 57111
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3459
AAEO224324 ncbi Aquifex aeolicus VF510


Names of the homologs of the genes in the group in each of these orgs
  G7306   G7304   G7303   EG12093   EG12092   EG12088   EG11773   EG10480   EG10479   EG10478   EG10477   
YPSE349747 YPSIP31758_1455YPSIP31758_1456YPSIP31758_1464YPSIP31758_1466YPSIP31758_1464YPSIP31758_1460YPSIP31758_1465YPSIP31758_1461YPSIP31758_1456YPSIP31758_1460
YPSE273123 YPTB2586YPTB2585YPTB2577YPTB2575YPTB2577YPTB2581YPTB2576YPTB2580YPTB2585YPTB2581
YPES386656 YPDSF_1964YPDSF_1963YPDSF_1955YPDSF_1953YPDSF_1955YPDSF_1959YPDSF_1954YPDSF_1958YPDSF_1963YPDSF_1959
YPES377628 YPN_2149YPN_2148YPN_2140YPN_2138YPN_2140YPN_2144YPN_2139YPN_2143YPN_2148YPN_2144
YPES360102 YPA_2046YPA_2045YPA_2037YPA_2035YPA_2037YPA_2041YPA_2036YPA_2040YPA_2045YPA_2041
YPES349746 YPANGOLA_A1815YPANGOLA_A1814YPANGOLA_A1806YPANGOLA_A1804YPANGOLA_A1806YPANGOLA_A1810YPANGOLA_A1805YPANGOLA_A1809YPANGOLA_A1814YPANGOLA_A1810
YPES214092 YPO2554YPO2553YPO2545YPO2543YPO2545YPO2549YPO2544YPO2548YPO2553YPO2549
YPES187410 Y1631Y1632Y1640Y1642Y1640Y1636Y1641Y1637Y1632Y1636
YENT393305 YE2806YE2804YE2803YE1356YE1354YE1350YE1355YE2806YE2805YE2804YE2800
XAUT78245 XAUT_0171XAUT_0170XAUT_0169XAUT_4620XAUT_4622XAUT_4626XAUT_4621XAUT_0171XAUT_4625XAUT_0170XAUT_0167
WSUC273121 WS1836WS1838WS1839WS0488WS0485WS0481WS0487WS1836WS1837WS1838WS1841
WPIP955 WD_1123WD_0560WD_1107WD_0969WD_0967WD_0159WD_0968WD_1123WD_0980WD_0560
WPIP80849 WB_0377WB_0208WB_0024WB_0950WB_0952WB_0562WB_0951WB_0377WB_0712WB_0208
TTHE300852 TTHA0085TTHA0087TTHA0097TTHA0095TTHA0091TTHA0085TTHA0092TTHA0087TTHA0091
TTHE262724 TT_C1919TT_C1917TT_C1907TT_C1909TT_C1913TT_C1919TT_C1912TT_C1917TT_C1913
TROS309801 TRD_1781TRD_1783TRD_1789TRD_1787TRD_1784TRD_1788TRD_1781TRD_1470TRD_1783
TPEN368408 TPEN_0181TPEN_0183TPEN_0185TPEN_1076TPEN_1082TPEN_0181TPEN_0182TPEN_0183TPEN_0187
TERY203124 TERY_3500TERY_4815TERY_2529TERY_0660TERY_1579TERY_0659TERY_1578TERY_4815TERY_1579
TELO197221 TLR0705TLL0720TLL0045TLL0720TLR0667TLL0719TLR0705TLR0668TLR1288TLR0667
TCRU317025 TCR_0818TCR_0820TCR_0063TCR_0830TCR_0828TCR_0824TCR_0829TCR_0818TCR_0825TCR_0824
STYP99287 STM2847STM2849STM2316STM2318STM2322STM2317STM2847STM2848STM2849STM2850
STRO369723 STROP_0390STROP_4286STROP_4054STROP_4052STROP_4054STROP_0393STROP_4053STROP_0390STROP_4057STROP_4286
SSP387093 SUN_0264SUN_0263SUN_0259SUN_2218SUN_2220SUN_2224SUN_2219SUN_0845SUN_2223SUN_0846SUN_0260
SSON300269 SSO_2570SSO_2868SSO_2567SSO_2333SSO_2335SSO_2339SSO_2334SSO_2866SSO_2867SSO_2868SSO_2869
SPRO399741 SPRO_2428SPRO_2430SPRO_2432SPRO_3296SPRO_3298SPRO_3302SPRO_3297SPRO_2428SPRO_2429SPRO_2430SPRO_2431
SMEL266834 SMC01913SMA1529SMC03179SMA1535SMC01925SMA1516SMA1536SMC01913SMC01922SMA1529
SMED366394 SMED_0889SMED_3620SMED_2806SMED_3624SMED_0901SMED_3614SMED_3625SMED_0889SMED_0898SMED_3620SMED_3614
SHIGELLA HYFIHYCEHYFFNUONNUOLNUOHNUOMHYFIHYFHHYCEHYCD
SFUM335543 SFUM_1942SFUM_1942SFUM_1935SFUM_0207SFUM_1941SFUM_1942SFUM_0204SFUM_1942SFUM_1941
SFLE373384 SFV_2534SFV_2782SFV_2531SFV_2343SFV_2345SFV_2349SFV_2344SFV_2784SFV_2783SFV_2782SFV_2781
SFLE198214 AAN44035.1AAN44229.1AAN44031.1AAN43865.1AAN43867.1AAN43871.1AAN43866.1AAN44035.1AAN44034.1AAN44229.1AAN44230.1
SERY405948 SACE_6899SACE_6891SACE_6889SACE_6891SACE_6895SACE_6890SACE_6894SACE_6899SACE_6895
SENT454169 SEHA_C3034SEHA_C3036SEHA_C2555SEHA_C2557SEHA_C2561SEHA_C2556SEHA_C3034SEHA_C3035SEHA_C3036SEHA_C3037
SENT321314 SCH_2780SCH_2782SCH_2316SCH_2318SCH_2322SCH_2317SCH_2780SCH_2781SCH_2782SCH_2783
SENT295319 SPA2705SPA2707SPA0548SPA0546SPA0542SPA0547SPA2705SPA2706SPA2707SPA2708
SENT220341 STY2969STY2971STY2546STY2548STY2552STY2547STY2969STY2970STY2971STY2972
SENT209261 T2749T2751T0548T0546T0542T0547T2749T2750T2751T2752
SDYS300267 SDY_2678SDY_2918SDY_2675SDY_2472SDY_2474SDY_2478SDY_2473SDY_2678SDY_2917SDY_2918SDY_2919
SCO SCO4600SCO3392SCO4575SCO4573SCO4569SCO4574SCO4600SCO4570SCO4565SCO4602
SBOY300268 SBO_2510SBO_2797SBO_2507SBO_2309SBO_2311SBO_2315SBO_2310SBO_2799SBO_2798SBO_2797SBO_2796
SAVE227882 SAV4882SAV4678SAV4850SAV4848SAV4844SAV4849SAV4882SAV4845SAV4840SAV4884
SARE391037 SARE_0461SARE_4460SARE_4452SARE_4450SARE_4452SARE_0464SARE_4451SARE_0461SARE_4455SARE_4721
RTYP257363 RT0345RT0343RT0526RT0779RT0783RT0780RT0345RT0782RT0343RT0783
RSPH349102 RSPH17025_1690RSPH17025_1691RSPH17025_1991RSPH17025_1993RSPH17025_1695RSPH17025_1700RSPH17025_2006RSPH17025_1696RSPH17025_1691
RSPH349101 RSPH17029_1737RSPH17029_1738RSPH17029_1191RSPH17029_1189RSPH17029_1742RSPH17029_1747RSPH17029_1175RSPH17029_1743RSPH17029_1738RSPH17029_1742
RSPH272943 RSP_0101RSP_0102RSP_2530RSP_2527RSP_0106RSP_2529RSP_2513RSP_0107RSP_0102RSP_0106
RSP357808 ROSERS_2990ROSERS_3675ROSERS_2232ROSERS_2230ROSERS_2997ROSERS_2236ROSERS_2231ROSERS_2990ROSERS_2235ROSERS_3675ROSERS_2236
RRUB269796 RRU_A0321RRU_A0316RRU_A0320RRU_A1568RRU_A1566RRU_A1562RRU_A1567RRU_A0321RRU_A0318RRU_A0316RRU_A0317
RRIC452659 RRIOWA_0578RRIOWA_0576RRIOWA_0943RRIOWA_1436RRIOWA_1440RRIOWA_1437RRIOWA_0578RRIOWA_1439RRIOWA_1440
RRIC392021 A1G_02750A1G_02740A1G_04480A1G_06715A1G_06735A1G_06720A1G_02750A1G_06730A1G_06735
RPRO272947 RP356RP354RP537RP792RP796RP793RP356RP795RP354RP796
RPAL316058 RPB_1265RPB_1264RPB_1263RPB_2587RPB_2585RPB_1353RPB_1358RPB_1265RPB_1354RPB_1264RPB_1261
RPAL316057 RPD_3850RPD_3851RPD_3852RPD_2872RPD_2874RPD_1332RPD_1337RPD_3850RPD_2877RPD_3851RPD_3854
RPAL316056 RPC_4568RPC_4570RPC_4571RPC_2417RPC_2415RPC_4065RPC_4060RPC_4568RPC_4569RPC_4570RPC_4574
RPAL316055 RPE_0957RPE_0956RPE_0955RPE_2536RPE_2534RPE_1716RPE_1721RPE_0957RPE_1717RPE_1712RPE_0953
RPAL258594 RPA4263RPA4262RPA2937RPA2939RPA4258RPA4253RPA2951RPA4257RPA4262RPA4258
RMET266264 RMET_4666RMET_4667RMET_4668RMET_0940RMET_0938RMET_0934RMET_0939RMET_4666RMET_4667RMET_4670
RLEG216596 PRL110292PRL110293PRL110294RL1714RL1712RL1708RL1713PRL110292RL1709PRL110293PRL110296
RFER338969 RFER_3287RFER_3288RFER_3289RFER_1506RFER_1504RFER_1500RFER_1505RFER_3287RFER_3090RFER_3288RFER_3291
RFEL315456 RF_0566RF_0564RF_0854RF_1257RF_1261RF_1258RF_0566RF_1260RF_0564RF_1261
REUT381666 H16_A2201H16_A2200H16_A2199H16_A1063H16_A1061H16_A1057H16_A1062H16_A2201H16_A1058H16_A2200H16_A2197
RETL347834 RHE_CH01603RHE_CH03739RHE_CH03735RHE_CH01616RHE_CH03745RHE_CH03734RHE_CH01603RHE_CH01613RHE_CH03739
RCON272944 RC0484RC0482RC0796RC1226RC1230RC1227RC0484RC1229RC1230
RCAS383372 RCAS_2089RCAS_1321RCAS_3382RCAS_2096RCAS_3388RCAS_3383RCAS_2089RCAS_3387RCAS_1321RCAS_3388
RCAN293613 A1E_03675A1E_03690A1E_02295A1E_05045A1E_05080A1E_05050A1E_03675A1E_05070A1E_03690A1E_05080
RBEL391896 A1I_05775A1I_05790A1I_05020A1I_07510A1I_07425A1I_07505A1I_05775A1I_07420A1I_05790A1I_07425
RBEL336407 RBE_0397RBE_0394RBE_0781RBE_0087RBE_0102RBE_0088RBE_0397RBE_0103RBE_0394RBE_0102
PSYR223283 PSPTO_3367PSPTO_3471PSPTO_3377PSPTO_3375PSPTO_3371PSPTO_3376PSPTO_3372PSPTO_3367PSPTO_3371
PSYR205918 PSYR_3199PSYR_3252PSYR_3209PSYR_3207PSYR_3203PSYR_3208PSYR_3204PSYR_3199PSYR_3203
PSP56811 PSYCPRWF_1698PSYCPRWF_1697PSYCPRWF_1687PSYCPRWF_1689PSYCPRWF_1693PSYCPRWF_1688PSYCPRWF_1698PSYCPRWF_1692PSYCPRWF_1697PSYCPRWF_1693
PSP296591 BPRO_0921BPRO_0920BPRO_0919BPRO_3243BPRO_3245BPRO_3249BPRO_3244BPRO_0921BPRO_0920BPRO_0917
PPUT76869 PPUTGB1_3693PPUTGB1_1853PPUTGB1_3703PPUTGB1_3701PPUTGB1_3697PPUTGB1_3702PPUTGB1_3698PPUTGB1_3693PPUTGB1_3697
PPUT351746 PPUT_1744PPUT_3510PPUT_1734PPUT_1736PPUT_1740PPUT_1735PPUT_1739PPUT_1744PPUT_1740
PPUT160488 PP_4121PP_2230PP_4131PP_4129PP_4125PP_4130PP_4126PP_4121PP_4125
PMEN399739 PMEN_2414PMEN_1441PMEN_2424PMEN_2422PMEN_2418PMEN_2423PMEN_2419PMEN_2414PMEN_2418
PMAR167539 PRO_0324PRO_0197PRO_0172PRO_0431PRO_0172PRO_0184PRO_0173PRO_0183PRO_0197PRO_0184
PLUM243265 PLU3087PLU3078PLU3077PLU3079PLU3083PLU3078PLU3082PLU3087PLU3083
PENT384676 PSEEN3486PSEEN3533PSEEN3496PSEEN3494PSEEN3490PSEEN3495PSEEN3491PSEEN3486PSEEN3490
PCRY335284 PCRYO_0574PCRYO_0575PCRYO_0585PCRYO_0583PCRYO_0579PCRYO_0584PCRYO_0574PCRYO_0580PCRYO_0575PCRYO_0579
PCAR338963 PCAR_0206PCAR_0206PCAR_0216PCAR_0214PCAR_0210PCAR_0215PCAR_0211PCAR_0206PCAR_0210
PARC259536 PSYC_0585PSYC_0586PSYC_0594PSYC_0596PSYC_0594PSYC_0590PSYC_0595PSYC_0585PSYC_0591PSYC_0586PSYC_0590
PAER208964 PA2639PA1054PA2649PA2647PA2643PA2648PA2644PA2639PA2643
PAER208963 PA14_29990PA14_50730PA14_29850PA14_29880PA14_29930PA14_29860PA14_29920PA14_29990PA14_29930
OANT439375 OANT_2423OANT_3531OANT_2410OANT_2412OANT_2416OANT_2411OANT_2423OANT_2415OANT_2416
NSP387092 NIS_0714NIS_0715NIS_0716NIS_0302NIS_0300NIS_0296NIS_0301NIS_0714NIS_0297NIS_0715NIS_0718
NSP35761 NOCA_4470NOCA_4465NOCA_4466NOCA_0533NOCA_0531NOCA_0527NOCA_0532NOCA_4470NOCA_0528NOCA_4465NOCA_4468
NSEN222891 NSE_0431NSE_0566NSE_0692NSE_0014NSE_0054NSE_0691NSE_0431NSE_0820NSE_0566NSE_0054
NOCE323261 NOC_2564NOC_1125NOC_1281NOC_1115NOC_1117NOC_1121NOC_1116NOC_2564NOC_1120NOC_1125NOC_1121
NMUL323848 NMUL_A1092NMUL_A1015NMUL_A1591NMUL_A1025NMUL_A1023NMUL_A1019NMUL_A1024NMUL_A1092NMUL_A1020NMUL_A1015NMUL_A1019
MTUB419947 MRA_0086MRA_0091MRA_0090MRA_3191MRA_3189MRA_3185MRA_0086MRA_3186MRA_0091MRA_0088
MTUB336982 TBFG_10083TBFG_10088TBFG_10087TBFG_13179TBFG_13177TBFG_13173TBFG_10083TBFG_13174TBFG_10088TBFG_10085
MTHE349307 MTHE_1051MTHE_1052MTHE_1058MTHE_1060MTHE_1058MTHE_1053MTHE_1059MTHE_1051MTHE_1054MTHE_1052
MTHE264732 MOTH_2184MOTH_2186MOTH_2188MOTH_0987MOTH_0985MOTH_0981MOTH_0986MOTH_2184MOTH_2185MOTH_2186MOTH_2190
MTBRV RV0082RV0087RV0086RV3158RV3156RV3152RV0082RV3153RV0087RV0084
MTBCDC MT0089MT3236MT0093MT3246MT3244MT3240MT0089MT3241MT3236MT0091
MSP266779 MESO_1023MESO_1033MESO_1035MESO_1033MESO_1029MESO_1034MESO_1023MESO_1030MESO_1029
MMAZ192952 MM2322MM2324MM1062MM2480MM2482MM2487MM2481MM2322MM2486MM1063MM1060
MMAG342108 AMB0206AMB0207AMB0208AMB2774AMB2776AMB2780AMB2775AMB0206AMB0207AMB0210
MLOT266835 MLL1371MLL1355MLL1352MLL1355MLL1361MLL1354MLL1371MLL1359MLL1361
MEXT419610 MEXT_1084MEXT_4616MEXT_1072MEXT_1074MEXT_1078MEXT_1073MEXT_1084MEXT_0381MEXT_1078
MCAP243233 MCA_1137MCA_1138MCA_1139MCA_1347MCA_1349MCA_1353MCA_1348MCA_1137MCA_1352MCA_1138MCA_1141
MBUR259564 MBUR_1296MBUR_1294MBUR_0135MBUR_1287MBUR_0132MBUR_1293MBUR_1288MBUR_1292MBUR_1294MBUR_1293
MBOV410289 BCG_0115BCG_0120BCG_0119BCG_3181BCG_3179BCG_3175BCG_0115BCG_3176BCG_0120BCG_0117
MBOV233413 MB0085MB0090MB0089MB3182MB3180MB3176MB0085MB3177MB0090MB0087
MBAR269797 MBAR_A2455MBAR_A0148MBAR_A3401MBAR_A3403MBAR_A3408MBAR_A3402MBAR_A2455MBAR_A3407MBAR_A0148MBAR_A0151
MAVI243243 MAV_5114MAV_5109MAV_5110MAV_4047MAV_4044MAV_4040MAV_4045MAV_5114MAV_4041MAV_5109MAV_5112
MACE188937 MA4373MA4372MA4371MA1506MA1504MA1499MA1505MA4373MA1500MA4372MA4369
LCHO395495 LCHO_1504LCHO_1512LCHO_1514LCHO_1512LCHO_1508LCHO_1513LCHO_1502LCHO_1509LCHO_1504
KPNE272620 GKPORF_B2389GKPORF_B2391GKPORF_B1970GKPORF_B1972GKPORF_B1976GKPORF_B1971GKPORF_B2389GKPORF_B2390GKPORF_B2391GKPORF_B2392
JSP290400 JANN_1170JANN_1194JANN_1196JANN_1194JANN_1185JANN_1195JANN_1170JANN_1187JANN_1185
HMOD498761 HM1_2197HM1_2199HM1_2204HM1_2206HM1_2204HM1_2200HM1_2205HM1_2197HM1_2199HM1_2200
HAUR316274 HAUR_4981HAUR_1640HAUR_3211HAUR_3213HAUR_4985HAUR_3212HAUR_4981HAUR_3216HAUR_4983
GVIO251221 GLR0749GLR2372GLR2599GLR3120GLR0218GLL1584GLL2536GLL0654GLR2372
GURA351605 GURA_2651GURA_0803GURA_0889GURA_4231GURA_4233GURA_0325GURA_0314GURA_2651GURA_0886GURA_0803GURA_0891
GSUL243231 GSU_0745GSU_3444GSU_0742GSU_0351GSU_0349GSU_3436GSU_3430GSU_0745GSU_0346GSU_3444GSU_0740
GMET269799 GMET_0369GMET_0153GMET_0372GMET_3342GMET_3344GMET_0161GMET_0171GMET_0369GMET_0369GMET_0153GMET_2600
GBET391165 GBCGDNIH1_1301GBCGDNIH1_2386GBCGDNIH1_1289GBCGDNIH1_1291GBCGDNIH1_1295GBCGDNIH1_1290GBCGDNIH1_1301GBCGDNIH1_1294GBCGDNIH1_1295
ESP42895 ENT638_3192ENT638_3194ENT638_2820ENT638_2822ENT638_2826ENT638_2821ENT638_3192ENT638_3193ENT638_3194ENT638_3195
EFER585054 EFER_0686EFER_0688EFER_0689EFER_0894EFER_0892EFER_0888EFER_0893EFER_0358EFER_0357EFER_0688EFER_0355
ECOO157 HYFIHYCEHYFFNUONNUOLNUOHNUOMHYCGHYCFHYCEHYCD
ECOL83334 ECS3351ECS3577ECS3348ECS3160ECS3162ECS3166ECS3161ECS3575ECS3576ECS3577ECS3578
ECOL585397 ECED1_3170ECED1_3172ECED1_2740ECED1_2742ECED1_2746ECED1_2741ECED1_3170ECED1_3171ECED1_3172ECED1_3173
ECOL585057 ECIAI39_2628ECIAI39_2909ECIAI39_2625ECIAI39_2423ECIAI39_2425ECIAI39_2429ECIAI39_2424ECIAI39_2907ECIAI39_2908ECIAI39_2909ECIAI39_2910
ECOL585056 ECUMN_2802ECUMN_3043ECUMN_2799ECUMN_2615ECUMN_2617ECUMN_2621ECUMN_2616ECUMN_3041ECUMN_3042ECUMN_3043ECUMN_3044
ECOL585055 EC55989_2774EC55989_2987EC55989_2771EC55989_2520EC55989_2522EC55989_2526EC55989_2521EC55989_2985EC55989_2986EC55989_2987EC55989_2988
ECOL585035 ECS88_2984ECS88_2986ECS88_2423ECS88_2425ECS88_2429ECS88_2424ECS88_2984ECS88_2985ECS88_2986ECS88_2987
ECOL585034 ECIAI1_2540ECIAI1_2815ECIAI1_2537ECIAI1_2350ECIAI1_2352ECIAI1_2356ECIAI1_2351ECIAI1_2813ECIAI1_2814ECIAI1_2815ECIAI1_2816
ECOL481805 ECOLC_1187ECOLC_1189ECOLC_1190ECOLC_1376ECOLC_1374ECOLC_1370ECOLC_1375ECOLC_0993ECOLC_0992ECOLC_1189ECOLC_0990
ECOL469008 ECBD_1199ECBD_1201ECBD_1202ECBD_1385ECBD_1383ECBD_1379ECBD_1384ECBD_1006ECBD_1005ECBD_1201ECBD_1003
ECOL439855 ECSMS35_2636ECSMS35_2846ECSMS35_2633ECSMS35_2430ECSMS35_2432ECSMS35_2436ECSMS35_2431ECSMS35_2844ECSMS35_2845ECSMS35_2846ECSMS35_2847
ECOL413997 ECB_02381ECB_02571ECB_02378ECB_02201ECB_02203ECB_02207ECB_02202ECB_02569ECB_02570ECB_02571ECB_02572
ECOL409438 ECSE_2774ECSE_2969ECSE_2771ECSE_2533ECSE_2535ECSE_2539ECSE_2534ECSE_2967ECSE_2968ECSE_2969ECSE_2970
ECOL405955 APECO1_3806APECO1_3804APECO1_4289APECO1_4287APECO1_4283APECO1_4288APECO1_3806APECO1_3805APECO1_3804APECO1_3803
ECOL364106 UTI89_C3082UTI89_C3084UTI89_C2556UTI89_C2558UTI89_C2562UTI89_C2557UTI89_C3082UTI89_C3083UTI89_C3084UTI89_C3085
ECOL362663 ECP_2682ECP_2684ECP_2315ECP_2317ECP_2321ECP_2316ECP_2682ECP_2683ECP_2684ECP_2685
ECOL331111 ECE24377A_2771ECE24377A_3009ECE24377A_2569ECE24377A_2571ECE24377A_2575ECE24377A_2570ECE24377A_3007ECE24377A_3008ECE24377A_3009ECE24377A_3010
ECOL316407 ECK2485:JW5805:B2489ECK2716:JW2691:B2721ECK2482:JW2471:B2486ECK2270:JW2271:B2276ECK2272:JW2273:B2278ECK2276:JW2277:B2282ECK2271:JW2272:B2277ECK2714:JW2689:B2719ECK2715:JW2690:B2720ECK2716:JW2691:B2721ECK2717:JW2692:B2722
ECOL199310 C3279C3281C2817C2819C2823C2818C3279C3280C3281C3282
ECAR218491 ECA1239ECA1241ECA1242ECA3016ECA3018ECA3022ECA3017ECA1239ECA1240ECA1241ECA1245
ECAN269484 ECAJ_0288ECAJ_0426ECAJ_0121ECAJ_0474ECAJ_0476ECAJ_0422ECAJ_0475ECAJ_0288ECAJ_0361ECAJ_0422
DSP255470 CBDBA844CBDBA1653CBDBA1655CBDBA885CBDBA883CBDBA879CBDBA884CBDBA844CBDBA880CBDBA850CBDBA1658
DSP216389 DEHABAV1_0780DEHABAV1_1317DEHABAV1_1318DEHABAV1_0817DEHABAV1_0815DEHABAV1_0811DEHABAV1_0816DEHABAV1_0780DEHABAV1_0812DEHABAV1_0785DEHABAV1_1320
DPSY177439 DP1042DP1043DP1044DP1309DP1317DP1311DP1042DP1042DP1318DP1046
DHAF138119 DSY3114DSY3115DSY3116DSY2578DSY2580DSY2584DSY2579DSY3114DSY2583DSY3115DSY3118
DETH243164 DET_0862DET_1571DET_1572DET_0933DET_0931DET_0927DET_0932DET_0862DET_0928DET_0867DET_1574
CTEP194439 CT_0767CT_0769CT_0774CT_0776CT_0774CT_0770CT_0775CT_0767CT_0769CT_0770
CSAL290398 CSAL_3130CSAL_0903CSAL_3120CSAL_3122CSAL_3126CSAL_3121CSAL_3125CSAL_3130CSAL_3126
CRUT413404 RMAG_0238RMAG_0248RMAG_0250RMAG_0248RMAG_0244RMAG_0249RMAG_0238RMAG_0245RMAG_0244
CPRO264201 PC0562PC0570PC0572PC0570PC0566PC0571PC0567PC0562PC0566
CHYD246194 CHY_1830CHY_1827CHY_1832CHY_1415CHY_1417CHY_1421CHY_1830CHY_1829CHY_1827CHY_1831
CFET360106 CFF8240_0125CFF8240_0127CFF8240_0128CFF8240_0169CFF8240_0167CFF8240_0163CFF8240_0125CFF8240_0126CFF8240_0127CFF8240_0131
CCUR360105 CCV52592_1637CCV52592_1635CCV52592_1038CCV52592_1516CCV52592_1518CCV52592_1522CCV52592_1517CCV52592_1637CCV52592_1636CCV52592_1635CCV52592_1790
CCON360104 CCC13826_0713CCC13826_0711CCC13826_1911CCC13826_1669CCC13826_1667CCC13826_1663CCC13826_1668CCC13826_0713CCC13826_0712CCC13826_0711CCC13826_1913
CCHL340177 CAG_0635CAG_0637CAG_0642CAG_0644CAG_0642CAG_0638CAG_0643CAG_0635CAG_0637CAG_0638
CBEI290402 CBEI_2995CBEI_2993CBEI_2988CBEI_2986CBEI_2988CBEI_2992CBEI_2987CBEI_2991CBEI_2993CBEI_2992
BVIE269482 BCEP1808_2333BCEP1808_2323BCEP1808_2321BCEP1808_2323BCEP1808_2327BCEP1808_2322BCEP1808_2333BCEP1808_2326BCEP1808_2327
BTRI382640 BT_1216BT_1206BT_1204BT_1206BT_1210BT_1205BT_1216BT_1209BT_1210
BTHE226186 BT_4066BT_4065BT_4060BT_4058BT_4060BT_4064BT_4066BT_4063BT_4065BT_4064
BTHA271848 BTH_II1266BTH_II1265BTH_II1264BTH_I1074BTH_I1072BTH_I1068BTH_I1073BTH_II1266BTH_I1069BTH_II1265BTH_II1262
BSUI470137 BSUIS_A0842BSUIS_B0498BSUIS_A0854BSUIS_A0852BSUIS_A0848BSUIS_A0853BSUIS_A0842BSUIS_A0849BSUIS_A0848
BSUI204722 BR_0803BR_A0500BR_0815BR_0813BR_0809BR_0814BR_0803BR_0810BR_0809
BSP36773 BCEP18194_A5576BCEP18194_A5566BCEP18194_A5564BCEP18194_A5566BCEP18194_A5570BCEP18194_A5565BCEP18194_A5576BCEP18194_A5569BCEP18194_A5570
BSP107806 BU155BU156BU166BU164BU160BU165BU161BU156BU160
BQUI283165 BQ05650BQ05750BQ05770BQ05750BQ05710BQ05760BQ05650BQ05720BQ05710
BPSE320373 BURPS668_A1612BURPS668_A1613BURPS668_A1614BURPS668_1303BURPS668_1301BURPS668_1297BURPS668_1302BURPS668_A1612BURPS668_A1613BURPS668_A1616
BPSE320372 BURPS1710B_B0123BURPS1710B_B0124BURPS1710B_B0125BURPS1710B_A1531BURPS1710B_A1529BURPS1710B_A1525BURPS1710B_A1530BURPS1710B_B0123BURPS1710B_B0124BURPS1710B_B0127
BPSE272560 BPSS1142BPSS1143BPSS1144BPSL1224BPSL1222BPSL1218BPSL1223BPSS1142BPSS1143BPSS1146
BMEL359391 BAB1_0823BAB2_0738BAB1_0835BAB1_0833BAB1_0829BAB1_0834BAB1_0823BAB1_0830BAB1_0829
BMEL224914 BMEI1157BMEII0770BMEI1145BMEI1147BMEI1151BMEI1146BMEI1157BMEI1150BMEI1151
BMAL320389 BMA10247_A1924BMA10247_0416BMA10247_0424BMA10247_0426BMA10247_0424BMA10247_0420BMA10247_0425BMA10247_A1924BMA10247_0420
BMAL320388 BMASAVP1_0658BMASAVP1_A1133BMASAVP1_A1141BMASAVP1_A1143BMASAVP1_A1141BMASAVP1_A1137BMASAVP1_A1142BMASAVP1_0658BMASAVP1_A1137
BMAL243160 BMA_A0517BMA_1826BMA_1818BMA_1816BMA_1818BMA_1822BMA_1817BMA_A0517BMA_1821BMA_1822
BJAP224911 BLR6344BLR6343BLR6342BLL4904BLL4906BLL4910BLL4905BLR6344BLL4909BLR6343BLR6340
BHEN283166 BH08940BH08840BH08820BH08840BH08880BH08830BH08940BH08870BH08880
BCEN331272 BCEN2424_2248BCEN2424_2238BCEN2424_2236BCEN2424_2238BCEN2424_2242BCEN2424_2237BCEN2424_2248BCEN2424_2241BCEN2424_2242
BCEN331271 BCEN_1636BCEN_1626BCEN_1624BCEN_1626BCEN_1630BCEN_1625BCEN_1636BCEN_1629BCEN_1630
BCAN483179 BCAN_A0818BCAN_B0500BCAN_A0830BCAN_A0828BCAN_A0824BCAN_A0829BCAN_A0818BCAN_A0825BCAN_A0824
BBAC360095 BARBAKC583_0779BARBAKC583_0789BARBAKC583_0791BARBAKC583_0789BARBAKC583_0785BARBAKC583_0790BARBAKC583_0779BARBAKC583_0786BARBAKC583_0785
BBAC264462 BD3086BD3085BD3888BD3886BD3888BD3891BD3887BD3086BD3085
BAPH198804 BUSG148BUSG149BUSG159BUSG157BUSG153BUSG158BUSG154BUSG149BUSG153
BAMB398577 BAMMC406_2165BAMMC406_2155BAMMC406_2153BAMMC406_2155BAMMC406_2159BAMMC406_2154BAMMC406_2165BAMMC406_2158BAMMC406_2159
BAMB339670 BAMB_2286BAMB_2276BAMB_2274BAMB_2276BAMB_2280BAMB_2275BAMB_2286BAMB_2279BAMB_2280
BABO262698 BRUAB1_0817BRUAB2_0722BRUAB1_0829BRUAB1_0827BRUAB1_0823BRUAB1_0828BRUAB1_0817BRUAB1_0824BRUAB1_0823
ASP76114 EBA4186EBA4187EBA4190EBA4848EBA4846EBA4842EBA4847EBA4186EBA4187EBA4192
ASP62977 ACIAD0731ACIAD0733ACIAD0376ACIAD0743ACIAD0741ACIAD0737ACIAD0742ACIAD0731ACIAD0738ACIAD0733ACIAD0737
ASAL382245 ASA_1810ASA_1812ASA_1814ASA_1724ASA_1726ASA_1730ASA_1725ASA_1810ASA_1811ASA_1812ASA_1813
APHA212042 APH_0520APH_0732APH_0044APH_0437APH_0711APH_0438APH_0520APH_0801APH_0732APH_0711
AMAR329726 AM1_1371AM1_2044AM1_2127AM1_2158AM1_2126AM1_1371AM1_2159AM1_3333AM1_2158
AHYD196024 AHA_2504AHA_2502AHA_2500AHA_1770AHA_1772AHA_1776AHA_1771AHA_2504AHA_2503AHA_2502AHA_2501
AFER243159 AFE_0943AFE_0944AFE_0945AFE_0487AFE_0485AFE_0481AFE_0486AFE_0943AFE_0482AFE_0944AFE_0947
ADEH290397 ADEH_3660ADEH_3659ADEH_3658ADEH_0415ADEH_0413ADEH_2575ADEH_0414ADEH_3660ADEH_3660ADEH_3659ADEH_3656
ACRY349163 ACRY_1401ACRY_1400ACRY_1399ACRY_1108ACRY_1110ACRY_1114ACRY_1109ACRY_1401ACRY_1113ACRY_1400ACRY_1397
ACEL351607 ACEL_0727ACEL_0270ACEL_0729ACEL_0280ACEL_0278ACEL_0274ACEL_0279ACEL_0727ACEL_0275ACEL_0270ACEL_0731
ACAU438753 AZC_4355AZC_4356AZC_4357AZC_1681AZC_1679AZC_1675AZC_1680AZC_4355AZC_1676AZC_4356AZC_4359
ABAC204669 ACID345_1313ACID345_1295ACID345_1303ACID345_1294ACID345_1308ACID345_1295ACID345_2252ACID345_1291ACID345_1313
AAEO224324 AQ_1312AQ_1314AQ_1382AQ_1383AQ_1320AQ_1315AQ_1321AQ_1312AQ_1314AQ_1373


Organism features enriched in list (features available for 188 out of the 196 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 9.175e-71192
Disease:Brucellosis 0.003362255
Disease:Bubonic_plague 0.001064566
Disease:Dysentery 0.001064566
Disease:Gastroenteritis 0.0052709913
Endospores:No 6.857e-645211
GC_Content_Range4:0-40 3.234e-1725213
GC_Content_Range4:40-60 0.000030994224
GC_Content_Range4:60-100 3.627e-669145
GC_Content_Range7:0-30 0.0010196647
GC_Content_Range7:30-40 5.701e-1319166
GC_Content_Range7:50-60 2.723e-961107
GC_Content_Range7:60-70 3.396e-665134
Genome_Size_Range5:0-2 2.758e-628155
Genome_Size_Range5:2-4 1.853e-737197
Genome_Size_Range5:4-6 1.585e-1093184
Genome_Size_Range5:6-10 2.706e-63047
Genome_Size_Range9:0-1 0.0076345327
Genome_Size_Range9:1-2 0.000148625128
Genome_Size_Range9:2-3 3.741e-619120
Genome_Size_Range9:4-5 0.00001394996
Genome_Size_Range9:5-6 0.00007994488
Genome_Size_Range9:6-8 0.00003892438
Gram_Stain:Gram_Neg 1.690e-10142333
Gram_Stain:Gram_Pos 5.431e-1118150
Habitat:Multiple 0.006508569178
Motility:No 0.000450633151
Oxygen_Req:Anaerobic 0.003392922102
Salinity:Non-halophilic 0.005654424106
Shape:Coccus 1.222e-9582
Shape:Rod 0.0001751131347



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 207
Effective number of orgs (counting one per cluster within 468 clusters): 153

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TTUR377629 ncbi Teredinibacter turnerae T79010
TSP28240 Thermotoga sp.2
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB82
TLET416591 ncbi Thermotoga lettingae TMO0
TDEN243275 ncbi Treponema denticola ATCC 354050
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-30
SSED425104 ncbi Shewanella sediminis HAW-EB32
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003452
SMUT210007 ncbi Streptococcus mutans UA1590
SLOI323850 ncbi Shewanella loihica PV-40
SHAL458817 ncbi Shewanella halifaxensis HAW-EB42
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RALB246199 Ruminococcus albus 80
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP117 Pirellula sp.1
PPRO298386 ncbi Photobacterium profundum SS90
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ951
PING357804 ncbi Psychromonas ingrahamii 371
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1251
PGIN242619 ncbi Porphyromonas gingivalis W830
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PAER178306 ncbi Pyrobaculum aerophilum IM22
OIHE221109 ncbi Oceanobacillus iheyensis HTE8312
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSP400668 ncbi Marinomonas sp. MWYL11
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MLEP272631 ncbi Mycobacterium leprae TN0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
ILOI283942 ncbi Idiomarina loihiensis L2TR1
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23961
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
EFAE226185 ncbi Enterococcus faecalis V5830
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPSY167879 ncbi Colwellia psychrerythraea 34H1
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus1
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BSUB ncbi Bacillus subtilis subtilis 1682
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH0
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BBUR224326 ncbi Borrelia burgdorferi B310
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ABOR393595 ncbi Alcanivorax borkumensis SK21
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7306   G7304   G7303   EG12093   EG12092   EG12088   EG11773   EG10480   EG10479   EG10478   EG10477   
ZMOB264203
VVUL216895
VVUL196600
VPAR223926
VFIS312309
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TTUR377629
TSP28240 TRQ2_1604TRQ2_1605
TSP1755 TETH514_0917
TPSE340099 TETH39_0438
TPET390874
TPAL243276
TMAR243274 TM_1214TM_1213
TLET416591
TDEN243275
SWOL335541 SWOL_1700
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP94122
SSED425104 SSED_3666SSED_3666
SSAP342451 SSP2096
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579 SPEA_3284SPEA_3284
SMUT210007
SLOI323850
SHAL458817 SHAL_3361SHAL_3361
SHAE279808 SH1999
SGOR29390
SEPI176280 SE_0646
SEPI176279 SERP0538
SDEN318161
SDEG203122
SBAL402882
SBAL399599
SAUR93062 SACOL0955
SAUR93061 SAOUHSC_00889
SAUR426430 NWMN_0822
SAUR418127 SAHV_0947
SAUR367830 SAUSA300_0855
SAUR359787 SAURJH1_0971
SAUR359786 SAURJH9_0952
SAUR282459 SAS0822
SAUR282458 SAR0914
SAUR273036 SAB0819C
SAUR196620 MW0834
SAUR158879 SA0813
SAUR158878 SAV0952
SAGA211110
SAGA208435
SAGA205921
SACI56780
RSAL288705
RALB246199
PTHE370438
PSTU379731 PST_1529
PSP117 RB1431
PPRO298386
PPEN278197
PMUL272843
PMOB403833 PMOB_0889
PING357804 PING_1359
PHAL326442 PSHAA1004
PGIN242619
PDIS435591
PATL342610
PAST100379
PAER178306 PAE2928PAE1581
OIHE221109 OB1991OB1991
MSYN262723
MSUC221988
MSP400668 MMWYL1_3982
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MLEP272631
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
MAQU351348 MAQU_2849
LXYL281090
LWEL386043 LWE2327
LSPH444177 BSPH_0608
LSAK314315
LREU557436
LPLA220668
LMON265669 LMOF2365_2351
LMON169963 LMO2378
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINN272626 LIN2477
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
KRAD266940
ILOI283942 IL1907
HSOM228400
HSOM205914
HINF71421
HINF374930
HINF281310
HDUC233412
HCHE349521 HCH_00804
GOXY290633
GFOR411154
FNUC190304
FNOD381764 FNOD_1740
FMAG334413
EFAE226185
DOLE96561
DNOD246195
DDES207559
CTRA471473
CTRA471472
CTET212717 CTC_01338
CSUL444179
CPSY167879 CPS_3818
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMAQ397948 CMAQ_0428
CKLU431943
CJEI306537
CJAP155077 CJA_0046
CGLU196627
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CCAV227941
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CACE272562
CABO218497
BTUR314724
BSUB BSU31600BSU31600
BPUM315750 BPUM_2829
BLON206672
BLIC279010 BL02544
BHER314723
BHAL272558 BH1319
BGAR290434
BCLA66692 ABC1635
BBUR224326
BAMY326423 RBAM_028680
BAFZ390236
AYEL322098
AURANTIMONAS
APLE434271
APLE416269
AORE350688
AMET293826 AMET_4152
ALAI441768
AFUL224325 AF_1831
ABOR393595 ABO_2658
AAUR290340


Organism features enriched in list (features available for 194 out of the 207 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.205e-105892
Arrangment:Clusters 1.718e-71617
Arrangment:Pairs 0.000474252112
Disease:Botulism 0.003940755
Disease:Meningitis 0.006081167
Disease:Pharyngitis 0.000136388
Disease:Pneumonia 0.0030117912
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 4.563e-61111
Disease:Wide_range_of_infections 4.563e-61111
Disease:bronchitis_and_pneumonitis 0.000136388
Endospores:No 3.371e-8100211
GC_Content_Range4:0-40 4.135e-15114213
GC_Content_Range4:60-100 2.035e-1710145
GC_Content_Range7:0-30 3.030e-73247
GC_Content_Range7:30-40 1.473e-782166
GC_Content_Range7:40-50 0.000213555117
GC_Content_Range7:50-60 5.250e-715107
GC_Content_Range7:60-70 3.339e-187134
Genome_Size_Range5:0-2 0.000224669155
Genome_Size_Range5:2-4 0.000120285197
Genome_Size_Range5:4-6 3.343e-638184
Genome_Size_Range5:6-10 7.016e-7247
Genome_Size_Range9:0-1 9.176e-62027
Genome_Size_Range9:2-3 9.232e-660120
Genome_Size_Range9:4-5 0.00975662396
Genome_Size_Range9:5-6 0.00013661588
Genome_Size_Range9:6-8 0.0000236238
Gram_Stain:Gram_Neg 3.229e-978333
Gram_Stain:Gram_Pos 3.961e-2299150
Habitat:Host-associated 0.000133988206
Motility:No 2.020e-776151
Motility:Yes 0.000485571267
Optimal_temp.:- 1.625e-757257
Optimal_temp.:30-35 0.006081167
Optimal_temp.:30-37 5.721e-81718
Optimal_temp.:37 0.000185751106
Oxygen_Req:Aerobic 3.064e-1128185
Oxygen_Req:Facultative 1.475e-13107201
Pathogenic_in:Human 0.000023593213
Pathogenic_in:No 0.009322464226
Pathogenic_in:Swine 0.003940755
Salinity:Non-halophilic 0.000392250106
Shape:Coccus 4.757e-95182
Shape:Irregular_coccus 0.0080830117
Shape:Sphere 0.00003971519
Temp._range:Mesophilic 0.0007008171473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 111
Effective number of orgs (counting one per cluster within 468 clusters): 99

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
NSEN222891 ncbi Neorickettsia sennetsu Miyayama 7.915e-1025010
APHA212042 ncbi Anaplasma phagocytophilum HZ 1.231e-832810
WPIP80849 Wolbachia endosymbiont of Brugia malayi 1.434e-833310
ECAN269484 ncbi Ehrlichia canis Jake 2.808e-835610
DETH243164 ncbi Dehalococcoides ethenogenes 195 4.279e-857411
DSP216389 ncbi Dehalococcoides sp. BAV1 5.282e-858511
WPIP955 Wolbachia pipientis 5.856e-838310
DSP255470 ncbi Dehalococcoides sp. CBDB1 5.915e-859111
RTYP257363 ncbi Rickettsia typhi Wilmington 6.671e-838810
RPRO272947 ncbi Rickettsia prowazekii Madrid E 6.845e-838910
MMAZ192952 ncbi Methanosarcina mazei Go1 6.995e-860011
MTHE349307 ncbi Methanosaeta thermophila PT 8.832e-839910
RCAN293613 ncbi Rickettsia canadensis McKiel 1.026e-740510
MACE188937 ncbi Methanosarcina acetivorans C2A 1.788e-765311
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 3.922e-746310
RBEL391896 ncbi Rickettsia bellii OSU 85-389 3.922e-746310
RFEL315456 ncbi Rickettsia felis URRWXCal2 5.625e-748010
RBEL336407 ncbi Rickettsia bellii RML369-C 6.112e-748410
CCON360104 ncbi Campylobacter concisus 13826 7.935e-774711
CCUR360105 ncbi Campylobacter curvus 525.92 9.605e-776011
TPEN368408 ncbi Thermofilum pendens Hrk 5 1.285e-63459
NSP387092 ncbi Nitratiruptor sp. SB155-2 1.791e-680411
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 2.074e-654710
ACEL351607 ncbi Acidothermus cellulolyticus 11B 4.234e-686911
SSP387093 ncbi Sulfurovum sp. NBC37-1 4.288e-687011
WSUC273121 ncbi Wolinella succinogenes DSM 1740 4.455e-687311
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith 6.861e-64169
OTSU357244 ncbi Orientia tsutsugamushi Boryong 7.799e-62748
MBAR269797 ncbi Methanosarcina barkeri Fusaro 7.948e-662610
RRIC452659 ncbi Rickettsia rickettsii Iowa 8.133e-64249
RCON272944 ncbi Rickettsia conorii Malish 7 9.412e-64319
MAVI243243 ncbi Mycobacterium avium 104 0.000010194011
CFET360106 ncbi Campylobacter fetus fetus 82-40 0.000032372110
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden 0.00004023378
ERUM302409 ncbi Ehrlichia ruminantium Gardel 0.00004313408
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas 0.00006343578
CCHL340177 ncbi Chlorobium chlorochromatii CaD3 0.000085079510
AAEO224324 ncbi Aquifex aeolicus VF5 0.000098680710
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE25 0.00011795739
MTBCDC ncbi Mycobacterium tuberculosis CDC1551 0.000178585710
MTBRV ncbi Mycobacterium tuberculosis H37Rv 0.000197986610
MBOV233413 ncbi Mycobacterium bovis AF2122/97 0.000200186710
CTEP194439 ncbi Chlorobium tepidum TLS 0.000204786910
MTUB336982 ncbi Mycobacterium tuberculosis F11 0.000207187010
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P2 0.000207187010
NSP35761 Nocardioides sp. 0.0002080123611
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra 0.000209487110
RAKA293614 ncbi Rickettsia akari Hartford 0.00021094168
TELO197221 ncbi Thermosynechococcus elongatus BP-1 0.000216787410
RSP357808 ncbi Roseiflexus sp. RS-1 0.0002174124111
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00023986219
SMAR399550 ncbi Staphylothermus marinus F1 0.00024502737
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00030846399
RMAS416276 ncbi Rickettsia massiliae MTU5 0.00033294418
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.0003601129911
PARC259536 ncbi Psychrobacter arcticus 273-4 0.0004019131211
MTHE264732 ncbi Moorella thermoacetica ATCC 39073 0.0004371132211
HWAL362976 ncbi Haloquadratum walsbyi DSM 16790 0.00047074618
NPHA348780 ncbi Natronomonas pharaonis DSM 2160 0.00049514648
TVOL273116 ncbi Thermoplasma volcanium GSS1 0.00052483057
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.0006585137211
NMUL323848 ncbi Nitrosospira multiformis ATCC 25196 0.0006966137911
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00081934958
BQUI283165 ncbi Bartonella quintana Toulouse 0.00084787179
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00085827189
TACI273075 ncbi Thermoplasma acidophilum DSM 1728 0.00091853317
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00095705058
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00106505128
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C 0.0011494144311
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-5482 0.0011986104010
AMAR234826 ncbi Anaplasma marginale St. Maries 0.00121853457
STRO369723 ncbi Salinispora tropica CNB-440 0.0012214104210
HPYL85963 ncbi Helicobacter pylori J99 0.00131295268
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00133187559
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri) 0.00137033517
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF8 0.00145213547
SARE391037 ncbi Salinispora arenicola CNS-205 0.0014717106210
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00158635398
MLAB410358 ncbi Methanocorpusculum labreanum Z 0.00172263637
BHEN283166 ncbi Bartonella henselae Houston-1 0.00185077849
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0018830150911
GMET269799 ncbi Geobacter metallireducens GS-15 0.0019388151311
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.00202207929
GSUL243231 ncbi Geobacter sulfurreducens PCA 0.0020851152311
RPAL316057 ncbi Rhodopseudomonas palustris BisB5 0.0021775152911
ACRY349163 ncbi Acidiphilium cryptum JF-5 0.0022251153211
GURA351605 ncbi Geobacter uraniireducens Rf4 0.0024777154711
PHOR70601 ncbi Pyrococcus horikoshii OT3 0.00270733887
DHAF138119 ncbi Desulfitobacterium hafniense Y51 0.0030201157511
RPAL316058 ncbi Rhodopseudomonas palustris HaA2 0.0030627157711
RPAL316055 ncbi Rhodopseudomonas palustris BisA53 0.0032386158511
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC1062 0.00377196038
XAUT78245 ncbi Xanthobacter autotrophicus Py2 0.0043810162911
HSP64091 ncbi Halobacterium sp. NRC-1 0.00440824177
HMOD498761 ncbi Heliobacterium modesticaldum Ice1 0.0045169119110
HSAL478009 ncbi Halobacterium salinarum R1 0.00595274367
PMAR74547 ncbi Prochlorococcus marinus MIT 9313 0.00625176448
HMAR272569 ncbi Haloarcula marismortui ATCC 43049 0.00647846478
HHEP235279 ncbi Helicobacter hepaticus ATCC 51449 0.00671226508
RPAL316056 ncbi Rhodopseudomonas palustris BisB18 0.0068345169611
RCAS383372 ncbi Roseiflexus castenholzii DSM 13941 0.0068522124310
CBLO203907 ncbi Candidatus Blochmannia floridanus 0.00720166568
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-2901 0.0072375125010
RRUB269796 ncbi Rhodospirillum rubrum ATCC 11170 0.0074352170911
PABY272844 ncbi Pyrococcus abyssi GE5 0.00804824567
ASP62977 ncbi Acinetobacter sp. ADP1 0.0082931172611
PFUR186497 ncbi Pyrococcus furiosus DSM 3638 0.00865954617
DPSY177439 ncbi Desulfotalea psychrophila LSv54 0.0088439127610
BCIC186490 Candidatus Baumannia cicadellinicola 0.00895976758
TKOD69014 ncbi Thermococcus kodakarensis KOD1 0.00944424677
TERY203124 ncbi Trichodesmium erythraeum IMS101 0.00953249479


Names of the homologs of the genes in the group in each of these orgs
  G7306   G7304   G7303   EG12093   EG12092   EG12088   EG11773   EG10480   EG10479   EG10478   EG10477   
NSEN222891 NSE_0431NSE_0566NSE_0692NSE_0014NSE_0054NSE_0691NSE_0431NSE_0820NSE_0566NSE_0054
APHA212042 APH_0520APH_0732APH_0044APH_0437APH_0711APH_0438APH_0520APH_0801APH_0732APH_0711
WPIP80849 WB_0377WB_0208WB_0024WB_0950WB_0952WB_0562WB_0951WB_0377WB_0712WB_0208
ECAN269484 ECAJ_0288ECAJ_0426ECAJ_0121ECAJ_0474ECAJ_0476ECAJ_0422ECAJ_0475ECAJ_0288ECAJ_0361ECAJ_0422
DETH243164 DET_0862DET_1571DET_1572DET_0933DET_0931DET_0927DET_0932DET_0862DET_0928DET_0867DET_1574
DSP216389 DEHABAV1_0780DEHABAV1_1317DEHABAV1_1318DEHABAV1_0817DEHABAV1_0815DEHABAV1_0811DEHABAV1_0816DEHABAV1_0780DEHABAV1_0812DEHABAV1_0785DEHABAV1_1320
WPIP955 WD_1123WD_0560WD_1107WD_0969WD_0967WD_0159WD_0968WD_1123WD_0980WD_0560
DSP255470 CBDBA844CBDBA1653CBDBA1655CBDBA885CBDBA883CBDBA879CBDBA884CBDBA844CBDBA880CBDBA850CBDBA1658
RTYP257363 RT0345RT0343RT0526RT0779RT0783RT0780RT0345RT0782RT0343RT0783
RPRO272947 RP356RP354RP537RP792RP796RP793RP356RP795RP354RP796
MMAZ192952 MM2322MM2324MM1062MM2480MM2482MM2487MM2481MM2322MM2486MM1063MM1060
MTHE349307 MTHE_1051MTHE_1052MTHE_1058MTHE_1060MTHE_1058MTHE_1053MTHE_1059MTHE_1051MTHE_1054MTHE_1052
RCAN293613 A1E_03675A1E_03690A1E_02295A1E_05045A1E_05080A1E_05050A1E_03675A1E_05070A1E_03690A1E_05080
MACE188937 MA4373MA4372MA4371MA1506MA1504MA1499MA1505MA4373MA1500MA4372MA4369
MBUR259564 MBUR_1296MBUR_1294MBUR_0135MBUR_1287MBUR_0132MBUR_1293MBUR_1288MBUR_1292MBUR_1294MBUR_1293
RBEL391896 A1I_05775A1I_05790A1I_05020A1I_07510A1I_07425A1I_07505A1I_05775A1I_07420A1I_05790A1I_07425
RFEL315456 RF_0566RF_0564RF_0854RF_1257RF_1261RF_1258RF_0566RF_1260RF_0564RF_1261
RBEL336407 RBE_0397RBE_0394RBE_0781RBE_0087RBE_0102RBE_0088RBE_0397RBE_0103RBE_0394RBE_0102
CCON360104 CCC13826_0713CCC13826_0711CCC13826_1911CCC13826_1669CCC13826_1667CCC13826_1663CCC13826_1668CCC13826_0713CCC13826_0712CCC13826_0711CCC13826_1913
CCUR360105 CCV52592_1637CCV52592_1635CCV52592_1038CCV52592_1516CCV52592_1518CCV52592_1522CCV52592_1517CCV52592_1637CCV52592_1636CCV52592_1635CCV52592_1790
TPEN368408 TPEN_0181TPEN_0183TPEN_0185TPEN_1076TPEN_1082TPEN_0181TPEN_0182TPEN_0183TPEN_0187
NSP387092 NIS_0714NIS_0715NIS_0716NIS_0302NIS_0300NIS_0296NIS_0301NIS_0714NIS_0297NIS_0715NIS_0718
PMAR167539 PRO_0324PRO_0197PRO_0172PRO_0431PRO_0172PRO_0184PRO_0173PRO_0183PRO_0197PRO_0184
ACEL351607 ACEL_0727ACEL_0270ACEL_0729ACEL_0280ACEL_0278ACEL_0274ACEL_0279ACEL_0727ACEL_0275ACEL_0270ACEL_0731
SSP387093 SUN_0264SUN_0263SUN_0259SUN_2218SUN_2220SUN_2224SUN_2219SUN_0845SUN_2223SUN_0846SUN_0260
WSUC273121 WS1836WS1838WS1839WS0488WS0485WS0481WS0487WS1836WS1837WS1838WS1841
RRIC392021 A1G_02750A1G_02740A1G_04480A1G_06715A1G_06735A1G_06720A1G_02750A1G_06730A1G_06735
OTSU357244 OTBS_1628OTBS_1630OTBS_2164OTBS_2160OTBS_2165OTBS_1628OTBS_2161OTBS_2160
MBAR269797 MBAR_A2455MBAR_A0148MBAR_A3401MBAR_A3403MBAR_A3408MBAR_A3402MBAR_A2455MBAR_A3407MBAR_A0148MBAR_A0151
RRIC452659 RRIOWA_0578RRIOWA_0576RRIOWA_0943RRIOWA_1436RRIOWA_1440RRIOWA_1437RRIOWA_0578RRIOWA_1439RRIOWA_1440
RCON272944 RC0484RC0482RC0796RC1226RC1230RC1227RC0484RC1229RC1230
MAVI243243 MAV_5114MAV_5109MAV_5110MAV_4047MAV_4044MAV_4040MAV_4045MAV_5114MAV_4041MAV_5109MAV_5112
CFET360106 CFF8240_0125CFF8240_0127CFF8240_0128CFF8240_0169CFF8240_0167CFF8240_0163CFF8240_0125CFF8240_0126CFF8240_0127CFF8240_0131
ERUM254945 ERWE_CDS_03140ERWE_CDS_01200ERWE_CDS_04980ERWE_CDS_05000ERWE_CDS_04460ERWE_CDS_04990ERWE_CDS_03140ERWE_CDS_03830
ERUM302409 ERGA_CDS_03090ERGA_CDS_01160ERGA_CDS_04880ERGA_CDS_04900ERGA_CDS_04410ERGA_CDS_04890ERGA_CDS_03090ERGA_CDS_03790
ECHA205920 ECH_0787ECH_0179ECH_0556ECH_0554ECH_0617ECH_0555ECH_0787ECH_0691
CCHL340177 CAG_0635CAG_0637CAG_0642CAG_0644CAG_0642CAG_0638CAG_0643CAG_0635CAG_0637CAG_0638
AAEO224324 AQ_1312AQ_1314AQ_1382AQ_1383AQ_1320AQ_1315AQ_1321AQ_1312AQ_1314AQ_1373
CPRO264201 PC0562PC0570PC0572PC0570PC0566PC0571PC0567PC0562PC0566
MTBCDC MT0089MT3236MT0093MT3246MT3244MT3240MT0089MT3241MT3236MT0091
MTBRV RV0082RV0087RV0086RV3158RV3156RV3152RV0082RV3153RV0087RV0084
MBOV233413 MB0085MB0090MB0089MB3182MB3180MB3176MB0085MB3177MB0090MB0087
CTEP194439 CT_0767CT_0769CT_0774CT_0776CT_0774CT_0770CT_0775CT_0767CT_0769CT_0770
MTUB336982 TBFG_10083TBFG_10088TBFG_10087TBFG_13179TBFG_13177TBFG_13173TBFG_10083TBFG_13174TBFG_10088TBFG_10085
MBOV410289 BCG_0115BCG_0120BCG_0119BCG_3181BCG_3179BCG_3175BCG_0115BCG_3176BCG_0120BCG_0117
NSP35761 NOCA_4470NOCA_4465NOCA_4466NOCA_0533NOCA_0531NOCA_0527NOCA_0532NOCA_4470NOCA_0528NOCA_4465NOCA_4468
MTUB419947 MRA_0086MRA_0091MRA_0090MRA_3191MRA_3189MRA_3185MRA_0086MRA_3186MRA_0091MRA_0088
RAKA293614 A1C_02670A1C_03985A1C_06115A1C_06145A1C_06120A1C_02670A1C_06135A1C_06145
TELO197221 TLR0705TLL0720TLL0045TLL0720TLR0667TLL0719TLR0705TLR0668TLR1288TLR0667
RSP357808 ROSERS_2990ROSERS_3675ROSERS_2232ROSERS_2230ROSERS_2997ROSERS_2236ROSERS_2231ROSERS_2990ROSERS_2235ROSERS_3675ROSERS_2236
BAPH198804 BUSG148BUSG149BUSG159BUSG157BUSG153BUSG158BUSG154BUSG149BUSG153
SMAR399550 SMAR_0018SMAR_1061SMAR_0645SMAR_0018SMAR_1062SMAR_1061SMAR_1060
BSP107806 BU155BU156BU166BU164BU160BU165BU161BU156BU160
RMAS416276 RMA_0503RMA_0501RMA_0834RMA_1243RMA_1247RMA_1244RMA_0503RMA_1247
AFER243159 AFE_0943AFE_0944AFE_0945AFE_0487AFE_0485AFE_0481AFE_0486AFE_0943AFE_0482AFE_0944AFE_0947
PARC259536 PSYC_0585PSYC_0586PSYC_0594PSYC_0596PSYC_0594PSYC_0590PSYC_0595PSYC_0585PSYC_0591PSYC_0586PSYC_0590
MTHE264732 MOTH_2184MOTH_2186MOTH_2188MOTH_0987MOTH_0985MOTH_0981MOTH_0986MOTH_2184MOTH_2185MOTH_2186MOTH_2190
HWAL362976 HQ1639AHQ1646AHQ1648AHQ1646AHQ1640AHQ1647AHQ1641AHQ1639A
NPHA348780 NP2296ANP0826ANP2314ANP2310ANP2298ANP2312ANP2300ANP2296A
TVOL273116 TVN1115TVN1455TVN1104TVN1112TVN1111TVN1113TVN1453
NOCE323261 NOC_2564NOC_1125NOC_1281NOC_1115NOC_1117NOC_1121NOC_1116NOC_2564NOC_1120NOC_1125NOC_1121
NMUL323848 NMUL_A1092NMUL_A1015NMUL_A1591NMUL_A1025NMUL_A1023NMUL_A1019NMUL_A1024NMUL_A1092NMUL_A1020NMUL_A1015NMUL_A1019
PMAR167546 P9301ORF_0194P9301ORF_0470P9301ORF_0170P9301ORF_0182P9301ORF_0171P9301ORF_0181P9301ORF_0194P9301ORF_0182
BQUI283165 BQ05650BQ05750BQ05770BQ05750BQ05710BQ05760BQ05650BQ05720BQ05710
BBAC360095 BARBAKC583_0779BARBAKC583_0789BARBAKC583_0791BARBAKC583_0789BARBAKC583_0785BARBAKC583_0790BARBAKC583_0779BARBAKC583_0786BARBAKC583_0785
TACI273075 TA0969TA0959TA0961TA0966TA0965TA0967TA0966
PMAR74546 PMT9312_0151PMT9312_0434PMT9312_0151PMT9312_0162PMT9312_0152PMT9312_0161PMT9312_0174PMT9312_0162
PMAR93060 P9215_01901P9215_05141P9215_01661P9215_01781P9215_01671P9215_01771P9215_01901P9215_01781
ADEH290397 ADEH_3660ADEH_3659ADEH_3658ADEH_0415ADEH_0413ADEH_2575ADEH_0414ADEH_3660ADEH_3660ADEH_3659ADEH_3656
BTHE226186 BT_4066BT_4065BT_4060BT_4058BT_4060BT_4064BT_4066BT_4063BT_4065BT_4064
AMAR234826 AM453AM746AM640AM745AM453AM707AM640
STRO369723 STROP_0390STROP_4286STROP_4054STROP_4052STROP_4054STROP_0393STROP_4053STROP_0390STROP_4057STROP_4286
HPYL85963 JHP1184JHP1194JHP1192JHP1188JHP1193JHP1189JHP1184JHP1188
CRUT413404 RMAG_0238RMAG_0248RMAG_0250RMAG_0248RMAG_0244RMAG_0249RMAG_0238RMAG_0245RMAG_0244
BAPH372461 BCC_099BCC_109BCC_107BCC_103BCC_108BCC_104BCC_099
CKOR374847 KCR_0139KCR_0144KCR_0146KCR_0140KCR_0141KCR_0139KCR_0140
SARE391037 SARE_0461SARE_4460SARE_4452SARE_4450SARE_4452SARE_0464SARE_4451SARE_0461SARE_4455SARE_4721
PMAR59920 PMN2A_1659PMN2A_1540PMN2A_1767PMN2A_1515PMN2A_1527PMN2A_1516PMN2A_1526PMN2A_1540
MLAB410358 MLAB_1622MLAB_0959MLAB_0955MLAB_0957MLAB_1619MLAB_0959MLAB_0960
BHEN283166 BH08940BH08840BH08820BH08840BH08880BH08830BH08940BH08870BH08880
MCAP243233 MCA_1137MCA_1138MCA_1139MCA_1347MCA_1349MCA_1353MCA_1348MCA_1137MCA_1352MCA_1138MCA_1141
GMET269799 GMET_0369GMET_0153GMET_0372GMET_3342GMET_3344GMET_0161GMET_0171GMET_0369GMET_0369GMET_0153GMET_2600
BTRI382640 BT_1216BT_1206BT_1204BT_1206BT_1210BT_1205BT_1216BT_1209BT_1210
GSUL243231 GSU_0745GSU_3444GSU_0742GSU_0351GSU_0349GSU_3436GSU_3430GSU_0745GSU_0346GSU_3444GSU_0740
RPAL316057 RPD_3850RPD_3851RPD_3852RPD_2872RPD_2874RPD_1332RPD_1337RPD_3850RPD_2877RPD_3851RPD_3854
ACRY349163 ACRY_1401ACRY_1400ACRY_1399ACRY_1108ACRY_1110ACRY_1114ACRY_1109ACRY_1401ACRY_1113ACRY_1400ACRY_1397
GURA351605 GURA_2651GURA_0803GURA_0889GURA_4231GURA_4233GURA_0325GURA_0314GURA_2651GURA_0886GURA_0803GURA_0891
PHOR70601 PH1434PH1437PH1452PH1434PH1440PH1437PH1439
DHAF138119 DSY3114DSY3115DSY3116DSY2578DSY2580DSY2584DSY2579DSY3114DSY2583DSY3115DSY3118
RPAL316058 RPB_1265RPB_1264RPB_1263RPB_2587RPB_2585RPB_1353RPB_1358RPB_1265RPB_1354RPB_1264RPB_1261
RPAL316055 RPE_0957RPE_0956RPE_0955RPE_2536RPE_2534RPE_1716RPE_1721RPE_0957RPE_1717RPE_1712RPE_0953
CPEL335992 SAR11_0884SAR11_0897SAR11_0894SAR11_0890SAR11_0896SAR11_0884SAR11_0891SAR11_0890
XAUT78245 XAUT_0171XAUT_0170XAUT_0169XAUT_4620XAUT_4622XAUT_4626XAUT_4621XAUT_0171XAUT_4625XAUT_0170XAUT_0167
HSP64091 VNG0637GVNG0648GVNG0646GVNG0639GVNG0647GVNG0640GVNG0637G
HMOD498761 HM1_2197HM1_2199HM1_2204HM1_2206HM1_2204HM1_2200HM1_2205HM1_2197HM1_2199HM1_2200
HSAL478009 OE1956FOE1967FOE1964FOE1957FOE1965FOE1958FOE1956F
PMAR74547 PMT2049PMT1354PMT2009PMT2020PMT2010PMT2019PMT2049PMT2020
HMAR272569 RRNAC2023RRNAC3531RRNAC1458RRNAC1455RRNAC1450RRNAC1456RRNAC1451RRNAC2023
HHEP235279 HH_1600HH_1590HH_1592HH_1596HH_1591HH_1595HH_1600HH_1596
RPAL316056 RPC_4568RPC_4570RPC_4571RPC_2417RPC_2415RPC_4065RPC_4060RPC_4568RPC_4569RPC_4570RPC_4574
RCAS383372 RCAS_2089RCAS_1321RCAS_3382RCAS_2096RCAS_3388RCAS_3383RCAS_2089RCAS_3387RCAS_1321RCAS_3388
CBLO203907 BFL491BFL481BFL483BFL487BFL482BFL486BFL491BFL487
CHYD246194 CHY_1830CHY_1827CHY_1832CHY_1415CHY_1417CHY_1421CHY_1830CHY_1829CHY_1827CHY_1831
RRUB269796 RRU_A0321RRU_A0316RRU_A0320RRU_A1568RRU_A1566RRU_A1562RRU_A1567RRU_A0321RRU_A0318RRU_A0316RRU_A0317
PABY272844 PAB1890PAB1394PAB1888PAB1396PAB1395PAB1394PAB1393
ASP62977 ACIAD0731ACIAD0733ACIAD0376ACIAD0743ACIAD0741ACIAD0737ACIAD0742ACIAD0731ACIAD0738ACIAD0733ACIAD0737
PFUR186497 PF1432PF1434PF1430PF1432PF1436PF1434PF1435
DPSY177439 DP1042DP1043DP1044DP1309DP1317DP1311DP1042DP1042DP1318DP1046
BCIC186490 BCI_0379BCI_0369BCI_0371BCI_0375BCI_0370BCI_0374BCI_0379BCI_0375
TKOD69014 TK2089TK2091TK1220TK2089TK2078TK2091TK2092
TERY203124 TERY_3500TERY_4815TERY_2529TERY_0660TERY_1579TERY_0659TERY_1578TERY_4815TERY_1579


Organism features enriched in list (features available for 107 out of the 111 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 4.053e-7292
Arrangment:Pairs 0.00015298112
Disease:Rocky_Mountain_Spotted_Fever 0.006041033
Disease:Tuberculosis 0.006041033
Genome_Size_Range5:0-2 1.050e-751155
Genome_Size_Range5:6-10 0.0030845247
Genome_Size_Range9:1-2 2.769e-846128
Gram_Stain:Gram_Pos 0.000262814150
Habitat:Aquatic 0.00342892691
Habitat:Multiple 0.000193918178
Habitat:Specialized 0.00208671853
Motility:Yes 0.001685936267
Oxygen_Req:Anaerobic 0.004370128102
Oxygen_Req:Facultative 3.389e-814201
Pathogenic_in:Human 0.000559025213
Salinity:Non-halophilic 6.901e-65106
Shape:Coccus 0.0045392782
Shape:Irregular_coccus 0.0045268817
Shape:Oval 0.004452645
Shape:Pleomorphic 0.000647868
Shape:Rod 0.000278148347
Temp._range:Mesophilic 2.526e-767473
Temp._range:Thermophilic 0.00120251435



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761090.4118
GALACTITOLCAT-PWY (galactitol degradation)73610.4088



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7304   G7303   EG12093   EG12092   EG12088   EG11773   EG10480   EG10479   EG10478   EG10477   
G73060.9997550.9996170.9994840.9995240.999650.9993940.999980.9996950.9997520.999763
G73040.9996120.9994260.9994420.9996830.9993780.999730.999750.9999740.999826
G73030.9994690.9995640.9993030.9994710.9995990.9994920.9995840.999715
EG120930.9999820.9999280.9999850.9994690.9998140.9994480.999564
EG120920.9999540.9999930.9995310.9998920.9994740.999665
EG120880.999940.9996090.9999680.9997480.999873
EG117730.9993810.9998310.999410.999624
EG104800.9996650.9997290.999735
EG104790.9997910.999875
EG104780.999833
EG10477



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PAIRWISE BLAST SCORES:

  G7306   G7304   G7303   EG12093   EG12092   EG12088   EG11773   EG10480   EG10479   EG10478   EG10477   
G73060.0f0------1.2e-72---
G7304-0.0f0-------0-
G7303--0.0f0--------
EG12093---0.0f0-------
EG12092----0.0f0------
EG12088-----0.0f0-----
EG11773------0.0f0----
EG104802.0e-77------0.0f0---
EG10479--------0.0f0--
EG10478-0-------0.0f0-
EG10477-----5.9e-11----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY0-1336 (NADH to fumarate electron transfer) (degree of match pw to cand: 0.235, degree of match cand to pw: 0.364, average score: 0.768)
  Genes in pathway or complex:
             0.9998 0.9991 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.9998 0.9992 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.9997 0.9993 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9995 0.9983 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.9996 0.9989 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9996 0.9989 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.9996 0.9990 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.9996 0.9992 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.9997 0.9991 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.1614 0.0851 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0856 0.0590 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.6530 0.3760 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.4194 0.2116 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- PWY0-1347 (NADH to trimethylamine N-oxide electron transfer) (degree of match pw to cand: 0.235, degree of match cand to pw: 0.364, average score: 0.832)
  Genes in pathway or complex:
             0.9998 0.9991 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.9998 0.9992 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.9997 0.9993 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9995 0.9983 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.9996 0.9989 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9996 0.9989 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.9996 0.9990 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.9996 0.9992 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.9997 0.9991 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.7520 0.5370 G7023 (torY) G7023-MONOMER (trimethylamine N-oxide reductase III, c-type cytochrome subunit)
             0.5460 0.3704 G7022 (torZ) G7022-MONOMER (trimethylamine N-oxide reductase III, TorZ subunit)
             0.5403 0.4226 EG11814 (torA) TORA-MONOMER (trimethylamine N-oxide reductase, catalytic subunit)
             0.3712 0.1610 EG11815 (torC) EG11815-MONOMER (TorC trimethylamine N-oxide reductase, cytochrome c-type subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- PWY0-1334 (NADH to cytochrome bd oxidase electron transfer) (degree of match pw to cand: 0.235, degree of match cand to pw: 0.364, average score: 0.831)
  Genes in pathway or complex:
             0.9998 0.9991 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.9998 0.9992 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.9997 0.9993 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9995 0.9983 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.9996 0.9989 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9996 0.9989 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.9996 0.9990 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.9996 0.9992 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.9997 0.9991 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.4722 0.2319 EG10174 (cydB) CYDB-MONOMER (cytochrome bd-I terminal oxidase subunit II)
             0.6641 0.5044 EG10173 (cydA) CYDA-MONOMER (cytochrome bd-I terminal oxidase subunit I)
             0.6837 0.5033 EG11379 (appB) APPB-MONOMER (cytochrome bd-II terminal oxidase subunit II)
             0.6270 0.5006 EG11380 (appC) APPC-MONOMER (cytochrome bd-II terminal oxidase subunit I)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- HYDROG3-CPLX (hydrogenase 3) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.364, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
             0.9493 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9992 0.9982 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- FERMENTATION-PWY (mixed acid fermentation) (degree of match pw to cand: 0.143, degree of match cand to pw: 0.364, average score: 0.597)
  Genes in pathway or complex:
             0.9166 0.7866 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.9463 0.8576 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.3021 0.1507 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.3482 0.1785 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.3439 0.1906 G6775 (adhP) ADHP-MONOMER (ethanol dehydrogenase)
             0.6350 0.4845 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.2951 0.0920 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.4166 0.2180 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.7925 0.6500 G592 (ldhA) DLACTDEHYDROGNAD-MONOMER (D-lactate dehydrogenase)
             0.5654 0.3326 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.8320 0.7394 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8558 0.7685 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.4595 0.1117 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.2435 0.1546 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.9992 0.9982 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9493 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.1614 0.0851 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0856 0.0590 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.6530 0.3760 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.4194 0.2116 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
             0.9400 0.7688 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.4214 0.0593 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.6695 0.1418 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- FHLMULTI-CPLX (formate hydrogenlyase complex) (degree of match pw to cand: 0.571, degree of match cand to pw: 0.364, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.9992 0.9982 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9493 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- ANARESP1-PWY (respiration (anaerobic)) (degree of match pw to cand: 0.148, degree of match cand to pw: 0.364, average score: 0.592)
  Genes in pathway or complex:
             0.2951 0.0920 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.4166 0.2180 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.3078 0.0652 EG10543 (lpd) E3-MONOMER (E3 monomer)
             0.1418 0.0515 EG10025 (aceF) ACEF-LIPOATE (AceF-lipoate)
             0.3283 0.1647 EG10024 (aceE) E1P-MONOMER (subunit of E1p component of pyruvate dehydrogenase complex)
             0.9400 0.7688 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.4214 0.0593 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.6695 0.1418 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.2435 0.1546 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
             0.4595 0.1117 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.5654 0.3326 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.8320 0.7394 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8558 0.7685 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.3021 0.1507 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.3482 0.1785 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.9512 0.8526 EG10258 (eno) ENOLASE-MONOMER (Eno)
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.9992 0.9982 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9493 0.8318 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.1614 0.0851 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0856 0.0590 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.6530 0.3760 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.4194 0.2116 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- PWY0-1348 (NADH to dimethyl sulfoxide electron transfer) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.364, average score: 0.773)
  Genes in pathway or complex:
             0.9998 0.9991 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.9998 0.9992 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.9997 0.9993 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9995 0.9983 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.9996 0.9989 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9996 0.9989 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.9996 0.9990 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.9996 0.9992 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.9997 0.9991 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.3183 0.1568 EG10234 (dmsC) DMSC-MONOMER (dimethyl sulfoxide reductase, chain C)
             0.2636 0.1370 EG10233 (dmsB) DMSB-MONOMER (dimethyl sulfoxide reductase, chain B)
             0.2736 0.1392 EG10232 (dmsA) DMSA-MONOMER (dimethyl sulfoxide reductase, chain A)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- PWY0-1352 (NADH to nitrate electron transfer) (degree of match pw to cand: 0.211, degree of match cand to pw: 0.364, average score: 0.807)
  Genes in pathway or complex:
             0.9998 0.9991 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.9998 0.9992 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.9997 0.9993 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9995 0.9983 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.9996 0.9989 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9996 0.9989 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.9996 0.9990 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.9996 0.9992 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.9997 0.9991 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.6602 0.4464 EG10638 (narG) NARG-MONOMER (nitrate reductase A, α subunit)
             0.6402 0.4434 EG10639 (narH) NARH-MONOMER (nitrate reductase A, β subunit)
             0.4266 0.3073 EG10640 (narI) NARI-MONOMER (nitrate reductase A, γ subunit)
             0.4252 0.3180 EG10644 (narV) NARV-MONOMER (nitrate reductase Z, γ subunit)
             0.6850 0.4261 EG10648 (narZ) NARZ-MONOMER (nitrate reductase Z, α subunit)
             0.7177 0.5658 EG10647 (narY) NARY-MONOMER (nitrate reductase Z, β subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- CPLX0-250 (hydrogenase 4) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.273, average score: 0.999)
  Genes in pathway or complex:
             0.9997 0.9992 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
             0.9651 0.8851 G7302 (hyfE) MONOMER0-142 (hydrogenase 4, component E)
             0.9995 0.9987 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
             0.9986 0.9958 G7300 (hyfC) MONOMER0-154 (hydrogenase 4, component C)
             0.9992 0.9984 EG11282 (hyfB) MONOMER0-153 (hydrogenase 4, component B)
             0.9662 0.8916 EG11150 (hyfA) MONOMER0-152 (hydrogenase 4, component A)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)

- NADH-DHI-CPLX (NADH:ubiquinone oxidoreductase I) (degree of match pw to cand: 0.308, degree of match cand to pw: 0.364, average score: 1.000)
  Genes in pathway or complex:
             0.9998 0.9991 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.9998 0.9992 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.9997 0.9993 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9995 0.9983 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.9996 0.9989 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9996 0.9989 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.9996 0.9990 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.9996 0.9992 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.9997 0.9991 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)

- PWY0-1335 (NADH to cytochrome bo oxidase electron transfer) (degree of match pw to cand: 0.235, degree of match cand to pw: 0.364, average score: 0.764)
  Genes in pathway or complex:
             0.9998 0.9991 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.9998 0.9992 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.9997 0.9993 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.9995 0.9983 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.9996 0.9989 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.9996 0.9989 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
   *in cand* 0.9997 0.9994 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
   *in cand* 0.9997 0.9994 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
   *in cand* 0.9997 0.9994 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.9996 0.9990 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.9996 0.9992 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
   *in cand* 0.9998 0.9993 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.9997 0.9991 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.3752 0.0893 EG10180 (cyoC) CYOC-MONOMER (cytochrome bo terminal oxidase subunit III)
             0.2746 0.1109 EG10179 (cyoB) CYOB-MONOMER (cytochrome bo terminal oxidase subunit I)
             0.4643 0.1152 EG10178 (cyoA) CYOA-MONOMER (cytochrome bo terminal oxidase subunit II)
             0.1951 0.0440 EG10181 (cyoD) CYOD-MONOMER (cytochrome bo terminal oxidase subunit IV)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9994 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9998 0.9995 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9994 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9996 0.9993 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
   *in cand* 0.9997 0.9994 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11773 EG12088 EG12092 EG12093 (centered at EG12092)
EG10477 EG10478 EG10479 EG10480 (centered at EG10478)
G7303 G7304 G7306 (centered at G7304)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7306   G7304   G7303   EG12093   EG12092   EG12088   EG11773   EG10480   EG10479   EG10478   EG10477   
314/623275/623290/623382/623381/623391/623336/623290/623333/623281/623299/623
AAEO224324:0:Tyes0159606270-153
AAVE397945:0:Tyes0--1210611-7-6
ABAC204669:0:Tyes-224123174969022-
ABAU360910:0:Tyes0-1012106110---
ABOR393595:0:Tyes--0--------
ABUT367737:0:Tyes-11-026--511-
ACAU438753:0:Tyes27142715271664052714127152718
ACEL351607:0:Tyes45604581084945650460
ACRY349163:8:Tyes29429329202612945293290
ADEH290397:0:Tyes32833282328120218113283328332823279
AEHR187272:0:Tyes12--026112--6
AFER243159:0:Tyes45145245364054511452455
AFUL224325:0:Tyes-----0-----
AHYD196024:0:Tyes7137117090261713712711710
AMAR234826:0:Tyes0---2051372040184-137
AMAR329726:9:Tyes0--66775078174907821945781
AMET293826:0:Tyes--0--------
ANAE240017:0:Tyes12--0261125--
APER272557:0:Tyes-1---0---10
APHA212042:0:Tyes4506500-372630373450716650630
ASAL382245:5:Tyes868890026186878889
ASP1667:2:Tyes---5-04----
ASP232721:2:Tyes0-101210611-7-6
ASP62928:0:Tyes0593601603601597602591---
ASP62977:0:Tyes3263270337335331336326332327331
ASP76114:2:Tyes0123993973933980-14
AVAR240292:3:Tyes-1455-40809691052-9701455-
BABO262698:0:Tno--0--------
BABO262698:1:Tno0--121061107-6
BAMB339670:3:Tno12-20261125-6
BAMB398577:3:Tno12-20261125-6
BAMY326423:0:Tyes--0--------
BANT260799:0:Tno9-2026-95--
BANT261594:2:Tno9-2026-95--
BANT568206:2:Tyes9-2026-95--
BANT592021:2:Tno9-2026-95--
BAPH198804:0:Tyes01-119510-615
BAPH372461:0:Tyes-0-10849-50-
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