CANDIDATE ID: 28

CANDIDATE ID: 28

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9955855e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.8181818e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7342 (yphF) (b2548)
   Products of gene:
     - G7342-MONOMER (YphF)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- G7340 (yphD) (b2546)
   Products of gene:
     - YPHD-MONOMER (YphD)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- EG12520 (ytfT) (b4230)
   Products of gene:
     - YTFT-MONOMER (YtfT)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12517 (ytfQ) (b4227)
   Products of gene:
     - YTFQ-MONOMER (YtfQ)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12439 (yjfF) (b4231)
   Products of gene:
     - YJFF-MONOMER (YjfF)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG11959 (alsA) (b4087)
   Products of gene:
     - YJCW-MONOMER (AlsA)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG11958 (alsC) (b4086)
   Products of gene:
     - YJCV-MONOMER (AlsC)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG10816 (rbsC) (b3750)
   Products of gene:
     - RBSC-MONOMER (RbsC)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10815 (rbsB) (b3751)
   Products of gene:
     - RBSB-MONOMER (RbsB)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10814 (rbsA) (b3749)
   Products of gene:
     - RBSA-MONOMER (RbsA)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10059 (araH) (b1898 (obsolete))
   Products of gene:
     - ARAH-MONOMER (high-affinity L-arabinose transport protein (ABC superfamily, membrane))
     - ABC-2-CPLX (arabinose ABC transporter)
       Reactions:
        alpha-L-arabinopyranose[periplasmic space] + ATP + H2O  ->  alpha-L-arabinopyranose[cytosol] + phosphate + ADP



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 157
Effective number of orgs (counting one per cluster within 468 clusters): 100

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175811
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295311
YPES386656 ncbi Yersinia pestis Pestoides F11
YPES377628 ncbi Yersinia pestis Nepal51611
YPES360102 ncbi Yersinia pestis Antiqua11
YPES349746 ncbi Yersinia pestis Angola11
YPES214092 ncbi Yersinia pestis CO9211
YPES187410 ncbi Yersinia pestis KIM 1011
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
VVUL216895 ncbi Vibrio vulnificus CMCP611
VVUL196600 ncbi Vibrio vulnificus YJ01611
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063311
VFIS312309 ncbi Vibrio fischeri ES11411
VEIS391735 ncbi Verminephrobacter eiseniae EF01-211
VCHO345073 ncbi Vibrio cholerae O39511
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696111
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB411
TSP28240 Thermotoga sp.9
TSP1755 Thermoanaerobacter sp.11
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 3322310
TPET390874 ncbi Thermotoga petrophila RKU-110
TMAR243274 ncbi Thermotoga maritima MSB811
TLET416591 ncbi Thermotoga lettingae TMO9
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT211
SSON300269 ncbi Shigella sonnei Ss04611
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 1530511
SPRO399741 ncbi Serratia proteamaculans 56811
SPEA398579 ncbi Shewanella pealeana ATCC 70034511
SMEL266834 ncbi Sinorhizobium meliloti 102111
SMED366394 ncbi Sinorhizobium medicae WSM41911
SHIGELLA ncbi Shigella flexneri 2a str. 2457T9
SHAL458817 ncbi Shewanella halifaxensis HAW-EB411
SHAE279808 ncbi Staphylococcus haemolyticus JCSC143511
SGLO343509 ncbi Sodalis glossinidius morsitans10
SFLE373384 ncbi Shigella flexneri 5 str. 84019
SFLE198214 ncbi Shigella flexneri 2a str. 30110
SERY405948 ncbi Saccharopolyspora erythraea NRRL 233811
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47611
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6711
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1811
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty211
SDYS300267 ncbi Shigella dysenteriae Sd19710
SCO ncbi Streptomyces coelicolor A3(2)10
SBOY300268 ncbi Shigella boydii Sb22711
SAVE227882 ncbi Streptomyces avermitilis MA-468011
SAGA211110 ncbi Streptococcus agalactiae NEM31611
SAGA208435 ncbi Streptococcus agalactiae 2603V/R11
SAGA205921 ncbi Streptococcus agalactiae A90911
RXYL266117 ncbi Rubrobacter xylanophilus DSM 994111
RSP101510 ncbi Rhodococcus jostii RHA110
RSOL267608 ncbi Ralstonia solanacearum GMI10009
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384111
RFER338969 ncbi Rhodoferax ferrireducens T11810
REUT264198 ncbi Ralstonia eutropha JMP1349
RETL347834 ncbi Rhizobium etli CFN 4211
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a11
PSP117 Pirellula sp.9
PPRO298386 ncbi Photobacterium profundum SS911
PMUL272843 ncbi Pasteurella multocida multocida Pm7011
PMOB403833 ncbi Petrotoga mobilis SJ9510
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO110
PING357804 ncbi Psychromonas ingrahamii 3711
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
OIHE221109 ncbi Oceanobacillus iheyensis HTE83111
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918811
MTHE264732 ncbi Moorella thermoacetica ATCC 3907311
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E11
MSP400668 ncbi Marinomonas sp. MWYL110
MSME246196 ncbi Mycobacterium smegmatis MC2 1559
MLOT266835 ncbi Mesorhizobium loti MAFF30309911
LLAC272623 ncbi Lactococcus lactis lactis Il140311
LCAS321967 ncbi Lactobacillus casei ATCC 33411
LACI272621 ncbi Lactobacillus acidophilus NCFM10
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857811
HSOM228400 ncbi Haemophilus somnus 233611
HSOM205914 ncbi Haemophilus somnus 129PT10
HINF71421 ncbi Haemophilus influenzae Rd KW2011
HINF374930 ncbi Haemophilus influenzae PittEE11
HINF281310 ncbi Haemophilus influenzae 86-028NP11
HCHE349521 ncbi Hahella chejuensis KCTC 23969
GVIO251221 ncbi Gloeobacter violaceus PCC 74219
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-211
GKAU235909 ncbi Geobacillus kaustophilus HTA42611
ESP42895 Enterobacter sp.11
EFER585054 ncbi Escherichia fergusonii ATCC 3546911
ECOO157 ncbi Escherichia coli O157:H7 EDL93311
ECOL83334 Escherichia coli O157:H711
ECOL585397 ncbi Escherichia coli ED1a11
ECOL585057 ncbi Escherichia coli IAI3911
ECOL585056 ncbi Escherichia coli UMN02611
ECOL585055 ncbi Escherichia coli 5598911
ECOL585035 ncbi Escherichia coli S8811
ECOL585034 ncbi Escherichia coli IAI111
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL413997 ncbi Escherichia coli B str. REL60611
ECOL409438 ncbi Escherichia coli SE1111
ECOL405955 ncbi Escherichia coli APEC O111
ECOL364106 ncbi Escherichia coli UTI8911
ECOL362663 ncbi Escherichia coli 53611
ECOL331111 ncbi Escherichia coli E24377A11
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
ECOL199310 ncbi Escherichia coli CFT07311
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104310
DRED349161 ncbi Desulfotomaculum reducens MI-19
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247211
CTET212717 ncbi Clostridium tetani E8811
CSAL290398 ncbi Chromohalobacter salexigens DSM 30439
CNOV386415 ncbi Clostridium novyi NT11
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130329
CDIF272563 ncbi Clostridium difficile 63011
CBOT515621 ncbi Clostridium botulinum Ba4 str. 65711
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B10
BXEN266265 ncbi Burkholderia xenovorans LB40011
BWEI315730 ncbi Bacillus weihenstephanensis KBAB411
BVIE269482 ncbi Burkholderia vietnamiensis G411
BTHU412694 ncbi Bacillus thuringiensis Al Hakam11
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-2711
BTHA271848 ncbi Burkholderia thailandensis E26411
BSUI470137 ncbi Brucella suis ATCC 2344511
BSUI204722 ncbi Brucella suis 133011
BSUB ncbi Bacillus subtilis subtilis 16811
BSP376 Bradyrhizobium sp.9
BSP36773 Burkholderia sp.11
BPUM315750 ncbi Bacillus pumilus SAFR-03211
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b10
BPSE272560 ncbi Burkholderia pseudomallei K9624310
BOVI236 Brucella ovis9
BMEL359391 ncbi Brucella melitensis biovar Abortus 230810
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M10
BLIC279010 ncbi Bacillus licheniformis ATCC 1458011
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11010
BHAL272558 ncbi Bacillus halodurans C-12511
BCLA66692 ncbi Bacillus clausii KSM-K1610
BCER572264 ncbi Bacillus cereus 03BB10211
BCER405917 Bacillus cereus W11
BCER315749 ncbi Bacillus cytotoxicus NVH 391-9811
BCER288681 ncbi Bacillus cereus E33L11
BCER226900 ncbi Bacillus cereus ATCC 145799
BCEN331272 ncbi Burkholderia cenocepacia HI242411
BCEN331271 ncbi Burkholderia cenocepacia AU 105411
BCAN483179 ncbi Brucella canis ATCC 2336511
BANT592021 ncbi Bacillus anthracis A024811
BANT568206 ncbi Bacillus anthracis CDC 68411
BANT261594 ncbi Bacillus anthracis Ames Ancestor11
BANT260799 ncbi Bacillus anthracis Sterne11
BAMY326423 ncbi Bacillus amyloliquefaciens FZB4211
BAMB398577 ncbi Burkholderia ambifaria MC40-611
BAMB339670 ncbi Burkholderia ambifaria AMMD11
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94110
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44911
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0311
APLE416269 ncbi Actinobacillus pleuropneumoniae L2011
AHYD196024 Aeromonas hydrophila dhakensis11


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   EG12520   EG12517   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   EG10059   
YPSE349747 YPSIP31758_1507YPSIP31758_4029YPSIP31758_0149YPSIP31758_0147YPSIP31758_0151YPSIP31758_0813YPSIP31758_4029YPSIP31758_1509YPSIP31758_1507YPSIP31758_2466YPSIP31758_1883
YPSE273123 YPTB1522YPTB3806YPTB0129YPTB0127YPTB0130YPTB3230YPTB3806YPTB2535YPTB2537YPTB1523YPTB2176
YPES386656 YPDSF_1913YPDSF_3327YPDSF_3518YPDSF_3520YPDSF_3517YPDSF_0556YPDSF_3327YPDSF_1910YPDSF_1913YPDSF_1469YPDSF_0557
YPES377628 YPN_2095YPN_3612YPN_0061YPN_0059YPN_0062YPN_3156YPN_3612YPN_2093YPN_2095YPN_2471YPN_1726
YPES360102 YPA_1996YPA_3791YPA_0116YPA_0114YPA_0117YPA_0306YPA_3791YPA_1994YPA_1996YPA_0803YPA_1617
YPES349746 YPANGOLA_A1761YPANGOLA_A4097YPANGOLA_A0477YPANGOLA_A0475YPANGOLA_A0479YPANGOLA_A0157YPANGOLA_A4097YPANGOLA_A1759YPANGOLA_A1761YPANGOLA_A3018YPANGOLA_A2263
YPES214092 YPO2501YPO3963YPO3906YPO3908YPO3905YPO0958YPO3963YPO2499YPO2501YPO1508YPO2257
YPES187410 Y1687Y3866Y0330Y0328Y0331Y3345Y3866Y1689Y1687Y2661Y2098
YENT393305 YE2815YE0010YE0143YE0141YE0144YE2814YE0010YE0010YE0011YE0009YE2005
VVUL216895 VV2_0064VV2_0063VV2_0063VV2_0064VV2_0063VV2_0062VV2_0063VV2_0063VV2_0064VV2_0062VV2_0063
VVUL196600 VVA0571VVA0570VVA0570VVA0571VVA0570VVA0162VVA0570VVA0570VVA0571VVA0569VVA0570
VPAR223926 VPA1084VPA1085VPA1085VPA1084VPA1085VPA1086VPA1085VPA1085VPA1084VPA1086VPA1671
VFIS312309 VF1447VF1446VF1446VF1447VF1446VF1445VF1446VF1446VF1447VF1445VF1446
VEIS391735 VEIS_1480VEIS_3417VEIS_2045VEIS_2026VEIS_2687VEIS_1088VEIS_2045VEIS_2045VEIS_2682VEIS_1088VEIS_3775
VCHO345073 VC0395_0008VC0395_0009VC0395_0009VC0395_0008VC0395_0009VC0395_A0944VC0395_0009VC0395_0009VC0395_0008VC0395_0010VC0395_0009
VCHO VCA0130VCA0129VCA0129VCA0130VCA0129VC1327VCA0129VCA0129VCA0130VCA0128VCA0129
TTEN273068 TTE0765TTE0205TTE0205TTE0206TTE0205TTE0763TTE0764TTE0205TTE0206TTE0204TTE0764
TSP28240 TRQ2_0833TRQ2_0835TRQ2_0833TRQ2_0974TRQ2_0975TRQ2_0974TRQ2_0974TRQ2_0975TRQ2_0835
TSP1755 TETH514_0166TETH514_0158TETH514_0165TETH514_0166TETH514_0165TETH514_0164TETH514_0165TETH514_0165TETH514_0166TETH514_0164TETH514_0990
TPSE340099 TETH39_2038TETH39_2039TETH39_2039TETH39_2038TETH39_2039TETH39_2040TETH39_2039TETH39_2039TETH39_2038TETH39_2040
TPET390874 TPET_1794TPET_0812TPET_1793TPET_1794TPET_0809TPET_1793TPET_1793TPET_1794TPET_0809TPET_0812
TMAR243274 TM_0958TM_0955TM_0955TM_0958TM_0955TM_0115TM_0955TM_0955TM_0958TM_0956TM_0112
TLET416591 TLET_0359TLET_1328TLET_0389TLET_0390TLET_0185TLET_1328TLET_1325TLET_1327TLET_0358
STYP99287 STM2190STM3883STM3883STM3884STM3883STM3882STM3883STM3883STM3884STM3882STM3883
SSON300269 SSO_2631SSO_2629SSO_4411SSO_4409SSO_4412SSO_2205SSO_3920SSO_3920SSO_4409SSO_3919SSO_1219
SSAP342451 SSP1392SSP1393SSP1393SSP1392SSP1393SSP1394SSP1393SSP1393SSP1392SSP1394SSP1393
SPRO399741 SPRO_4229SPRO_4227SPRO_4766SPRO_4768SPRO_4765SPRO_1029SPRO_4899SPRO_4899SPRO_4898SPRO_4900SPRO_2247
SPEA398579 SPEA_0517SPEA_0516SPEA_2283SPEA_0517SPEA_0516SPEA_2284SPEA_0516SPEA_0516SPEA_0517SPEA_0515SPEA_0516
SMEL266834 SMB21377SMB21375SMB21589SMB21587SMB21590SMB21376SMC02772SMB20352SMB21345SMC02325SMB20506
SMED366394 SMED_4769SMED_4767SMED_4910SMED_4908SMED_4911SMED_4768SMED_5745SMED_3767SMED_4740SMED_0226SMED_3602
SHIGELLA MGLBYPHDYTFTRBSCMGLARBSCRBSCMGLAARAH
SHAL458817 SHAL_0581SHAL_0580SHAL_2011SHAL_0581SHAL_0580SHAL_2010SHAL_0580SHAL_0580SHAL_0581SHAL_0579SHAL_0580
SHAE279808 SH0179SH0178SH0178SH0179SH0178SH0177SH0178SH0178SH0179SH0177SH0178
SGLO343509 SG0963SG0613SG0613SG0614SG2401SG0964SG0613SG0613SG0614SG0964
SFLE373384 SFV_2596SFV_2594SFV_4262SFV_4261SFV_2224SFV_3749SFV_3749SFV_3973SFV_1942
SFLE198214 AAN43756.1AAN44091.1AAN45679.1AAN45681.1AAN45678.1AAN43755.1AAN45272.1AAN45272.1AAN43755.1AAN43497.1
SERY405948 SACE_5660SACE_5660SACE_2988SACE_5660SACE_5660SACE_5659SACE_1882SACE_5660SACE_5660SACE_5659SACE_5660
SENT454169 SEHA_C2425SEHA_C4216SEHA_C4216SEHA_C4217SEHA_C4216SEHA_C4215SEHA_C4216SEHA_C4216SEHA_C4217SEHA_C4215SEHA_C4216
SENT321314 SCH_2206SCH_3796SCH_3796SCH_3797SCH_3796SCH_3795SCH_3796SCH_3796SCH_3797SCH_3795SCH_3796
SENT220341 STY2424STY3895STY3895STY3894STY3895STY3896STY3895STY3895STY3894STY3896STY3895
SENT209261 T0665T3636T3636T3635T3636T3637T3636T3636T3635T3637T3636
SDYS300267 SDY_2130SDY_3997SDY_4248SDY_4249SDY_4128SDY_3997SDY_3997SDY_4130SDY_1121SDY_1122
SCO SCO2747SCO2747SCO6568SCO2747SCO2747SCO2405SCO2747SCO2747SCO2747SCO2746
SBOY300268 SBO_2574SBO_2572SBO_4216SBO_4218SBO_4215SBO_2178SBO_3764SBO_3764SBO_4218SBO_3575SBO_1107
SAVE227882 SAV971SAV1827SAV1827SAV971SAV968SAV7416SAV5318SAV5318SAV5318SAV7416SAV968
SAGA211110 GBS0113GBS0114GBS0114GBS0113GBS0114GBS0115GBS0114GBS0114GBS0113GBS0115GBS0114
SAGA208435 SAG_0114SAG_0115SAG_0115SAG_0114SAG_0115SAG_0116SAG_0115SAG_0115SAG_0114SAG_0116SAG_0115
SAGA205921 SAK_0166SAK_0167SAK_0167SAK_0166SAK_0167SAK_0168SAK_0167SAK_0167SAK_0166SAK_0168SAK_0167
RXYL266117 RXYL_0948RXYL_1889RXYL_3002RXYL_0948RXYL_3002RXYL_3003RXYL_3002RXYL_0947RXYL_0948RXYL_0946RXYL_3002
RSP101510 RHA1_RO00819RHA1_RO00821RHA1_RO00821RHA1_RO00821RHA1_RO04085RHA1_RO00821RHA1_RO00821RHA1_RO00819RHA1_RO04085RHA1_RO00821
RSOL267608 RSC1017RSP1635RSC1243RSC1241RSC1242RSC1243RSC1017RSC1242RSC2756
RLEG216596 PRL90225PRL90223RL2378RL2376RL2379RL2449RL1746RL1746RL2721RL4654RL4229
RFER338969 RFER_3131RFER_0439RFER_0439RFER_0439RFER_3129RFER_0439RFER_3130RFER_1903RFER_3129RFER_0439
REUT264198 REUT_B4136REUT_A1652REUT_B4134REUT_A1653REUT_A1652REUT_A1652REUT_B4136REUT_A1653REUT_B4134
RETL347834 RHE_CH02400RHE_CH03189RHE_CH02087RHE_CH02085RHE_CH02088RHE_PB00077RHE_CH01211RHE_PF00034RHE_CH00612RHE_CH03989RHE_CH03693
PSYR223283 PSPTO_2399PSPTO_2400PSPTO_3490PSPTO_2400PSPTO_3489PSPTO_3488PSPTO_3488PSPTO_2399PSPTO_3489PSPTO_2640
PSYR205918 PSYR_0776PSYR_2570PSYR_2570PSYR_3265PSYR_2570PSYR_3264PSYR_2570PSYR_2570PSYR_2151PSYR_3264PSYR_2373
PSP117 RB5973RB3497RB3497RB3493RB3496RB3497RB3497RB3493RB3496
PPRO298386 PBPRB1559PBPRB1558PBPRB1558PBPRB1559PBPRB1558PBPRB1871PBPRB1558PBPRB1558PBPRB1559PBPRB1557PBPRB1558
PMUL272843 PM1325PM0154PM1378PM0153PM1378PM1326PM0154PM0154PM0153PM0155PM0154
PMOB403833 PMOB_0923PMOB_1602PMOB_0922PMOB_0923PMOB_0922PMOB_1601PMOB_1602PMOB_0922PMOB_0923PMOB_0922
PLUM243265 PLU0057PLU0057PLU0058PLU0057PLU0056PLU0057PLU0057PLU0058PLU0056PLU0057
PING357804 PING_0343PING_0342PING_2807PING_0343PING_0342PING_0341PING_0342PING_0342PING_0343PING_0341PING_0342
PFLU216595 PFLU3727PFLU2585PFLU2583PFLU3726PFLU3119PFLU3994PFLU3994PFLU3996PFLU2584PFLU4682
OIHE221109 OB2572OB2573OB2573OB2572OB2573OB2574OB2573OB2573OB2572OB2574OB2573
OANT439375 OANT_0292OANT_0290OANT_1416OANT_1418OANT_1415OANT_0291OANT_4066OANT_4066OANT_0292OANT_3347OANT_0290
MTHE264732 MOTH_0612MOTH_0614MOTH_0614MOTH_0699MOTH_0614MOTH_0613MOTH_0614MOTH_0614MOTH_0612MOTH_0613MOTH_0614
MSUC221988 MS1612MS0199MS0199MS1612MS1610MS0642MS0199MS0199MS1612MS0062MS0061
MSP400668 MMWYL1_3110MMWYL1_1867MMWYL1_3533MMWYL1_3535MMWYL1_3532MMWYL1_1986MMWYL1_3108MMWYL1_1987MMWYL1_3110MMWYL1_1987
MSME246196 MSMEG_3999MSMEG_4001MSMEG_1710MSMEG_1712MSMEG_1709MSMEG_4171MSMEG_4171MSMEG_3095MSMEG_3090
MLOT266835 MLL7668MLL1013MLL7665MLL1012MLL7665MLL5705MLL2145MLL7011MLL1012MLL3598MLL1013
LLAC272623 L82310L83296L83296L82310L83296L84240L83296L83296L82310L84240L83296
LCAS321967 LSEI_0310LSEI_0309LSEI_0309LSEI_0310LSEI_0309LSEI_0308LSEI_0309LSEI_0309LSEI_0310LSEI_0308LSEI_0309
LACI272621 LBA1481LBA1482LBA1481LBA1482LBA1483LBA1482LBA1482LBA1481LBA1483LBA1482
KPNE272620 GKPORF_B0794GKPORF_B3497GKPORF_B3986GKPORF_B3984GKPORF_B3987GKPORF_B4919GKPORF_B3497GKPORF_B3497GKPORF_B3498GKPORF_B3496GKPORF_B1556
HSOM228400 HSM_0556HSM_0091HSM_0822HSM_0092HSM_0432HSM_0557HSM_0558HSM_0091HSM_0092HSM_0090HSM_0091
HSOM205914 HS_0767HS_0584HS_1579HS_1581HS_1579HS_0768HS_0584HS_0769HS_0767HS_1579
HINF71421 HI_0504HI_0503HI_0503HI_0504HI_0503HI_0823HI_0503HI_0503HI_0504HI_0502HI_0503
HINF374930 CGSHIEE_00470CGSHIEE_06515CGSHIEE_00475CGSHIEE_00470CGSHIEE_00475CGSHIEE_07945CGSHIEE_00475CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480CGSHIEE_00475
HINF281310 NTHI0632NTHI0631NTHI0631NTHI0632NTHI0631NTHI0630NTHI0631NTHI0631NTHI0632NTHI0630NTHI0631
HCHE349521 HCH_02470HCH_01166HCH_02470HCH_01167HCH_02470HCH_02470HCH_02467HCH_01167HCH_02470
GVIO251221 GLR0807GLR1730GLR1730GLR0807GLR1730GLR1730GLR1730GLR0807GLR1730
GTHE420246 GTNG_3170GTNG_3171GTNG_3171GTNG_3170GTNG_1814GTNG_3172GTNG_3171GTNG_3171GTNG_3170GTNG_3172GTNG_3171
GKAU235909 GK1896GK3227GK1893GK3226GK3227GK3228GK3227GK3227GK3226GK3228GK3227
ESP42895 ENT638_2750ENT638_4114ENT638_0414ENT638_0412ENT638_0415ENT638_0289ENT638_0288ENT638_4114ENT638_4113ENT638_4115ENT638_2474
EFER585054 EFER_2518EFER_4049EFER_4308EFER_4306EFER_4309EFER_4283EFER_4284EFER_4049EFER_4050EFER_4048EFER_1125
ECOO157 YPHFYPHDYTFTYTFQYJFFMGLAZ5690RBSCRBSBRBSAARAH_B
ECOL83334 ECS3414ECS3412ECS5207ECS5205ECS5208ECS3041ECS5072ECS4692ECS4693ECS4691ECS2607
ECOL585397 ECED1_2975ECED1_2973ECED1_5086ECED1_5084ECED1_5086ECED1_4821ECED1_4820ECED1_4440ECED1_4441ECED1_4439ECED1_2164
ECOL585057 ECIAI39_2751ECIAI39_2749ECIAI39_4700ECIAI39_4698ECIAI39_2749ECIAI39_4511ECIAI39_4510ECIAI39_4355ECIAI39_4356ECIAI39_4354ECIAI39_1154
ECOL585056 ECUMN_2868ECUMN_2866ECUMN_4763ECUMN_4761ECUMN_4764ECUMN_2482ECUMN_4280ECUMN_4280ECUMN_4281ECUMN_4279ECUMN_2193
ECOL585055 EC55989_2834EC55989_2832EC55989_4788EC55989_4786EC55989_4789EC55989_2399EC55989_4225EC55989_4225EC55989_4226EC55989_4224EC55989_2075
ECOL585035 ECS88_2718ECS88_2716ECS88_4820ECS88_4818ECS88_4821ECS88_4588ECS88_4172ECS88_4172ECS88_4173ECS88_4171ECS88_1954
ECOL585034 ECIAI1_2601ECIAI1_2599ECIAI1_4462ECIAI1_4460ECIAI1_4463ECIAI1_2226ECIAI1_3934ECIAI1_3934ECIAI1_3935ECIAI1_3933ECIAI1_1983
ECOL481805 ECOLC_1129ECOLC_1131ECOLC_3781ECOLC_3783ECOLC_3780ECOLC_3939ECOLC_3940ECOLC_4244ECOLC_4243ECOLC_4245ECOLC_1736
ECOL469008 ECBD_1136ECBD_1138ECBD_3804ECBD_3806ECBD_3803ECBD_3943ECBD_3944ECBD_4280ECBD_4279ECBD_4281ECBD_1742
ECOL439855 ECSMS35_2701ECSMS35_2699ECSMS35_4707ECSMS35_4705ECSMS35_4708ECSMS35_4553ECSMS35_4552ECSMS35_4118ECSMS35_4119ECSMS35_4117ECSMS35_1287
ECOL413997 ECB_02440ECB_02438ECB_04098ECB_04096ECB_04099ECB_03959ECB_03958ECB_03636ECB_03637ECB_03635ECB_01867
ECOL409438 ECSE_2835ECSE_2833ECSE_4535ECSE_4533ECSE_4536ECSE_4385ECSE_4384ECSE_4040ECSE_4041ECSE_4039ECSE_2131
ECOL405955 APECO1_3983APECO1_3985APECO1_2162APECO1_2164APECO1_2161APECO1_2363APECO1_2364APECO1_2713APECO1_2712APECO1_2714APECO1_944
ECOL364106 UTI89_C2867UTI89_C2865UTI89_C4834UTI89_C4832UTI89_C4835UTI89_C4682UTI89_C4305UTI89_C4305UTI89_C4306UTI89_C4304UTI89_C2099
ECOL362663 ECP_2549ECP_2547ECP_4479ECP_4477ECP_4480ECP_4330ECP_3344ECP_3671ECP_3951ECP_3948ECP_1840
ECOL331111 ECE24377A_2833ECE24377A_2831ECE24377A_4799ECE24377A_4797ECE24377A_4800ECE24377A_2444ECE24377A_4266ECE24377A_4266ECE24377A_4267ECE24377A_4265ECE24377A_2130
ECOL316407 ECK2545:JW2532:B2548ECK2543:JW2530:B2546ECK4225:JW5753:B4230ECK4223:JW4186:B4227ECK4226:JW5754:B4231ECK4080:JW4048:B4087ECK4079:JW4047:B4086ECK3744:JW3729:B3750ECK3745:JW3730:B3751ECK3743:JW3728:B3749ECK1897:JW1887:B4460
ECOL199310 C3070C3068C5327C5325C5328C5093C5092C4678C4679C4677C2312
ECAR218491 ECA0012ECA4234ECA4236ECA4233ECA0011ECA1461ECA0012ECA0013ECA0011ECA2271
DRED349161 DRED_2522DRED_2523DRED_2522DRED_2523DRED_2523DRED_2523DRED_2522DRED_2524DRED_2523
CVIO243365 CV_3016CV_3017CV_3017CV_3016CV_3017CV_3018CV_3017CV_3017CV_3016CV_3018CV_3017
CTET212717 CTC_00907CTC_00906CTC_02349CTC_02347CTC_02349CTC_00905CTC_02349CTC_02349CTC_02347CTC_02350CTC_02349
CSAL290398 CSAL_0363CSAL_0362CSAL_0362CSAL_0363CSAL_0362CSAL_0362CSAL_0362CSAL_0363CSAL_1021
CNOV386415 NT01CX_0162NT01CX_0163NT01CX_0163NT01CX_0162NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0162NT01CX_0164NT01CX_0163
CGLU196627 CG1412CG1412CG1413CG1412CG1411CG1412CG1412CG1413CG1412
CDIF272563 CD0300CD1588CD0302CD1589CD0302CD0301CD1588CD0302CD0300CD0301CD0302
CBOT515621 CLJ_B1315CLJ_B1313CLJ_B1313CLJ_B1315CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1315CLJ_B1312CLJ_B1313
CBOT508765 CLL_A1530CLL_A1530CLL_A1531CLL_A1530CLL_A1529CLL_A1530CLL_A1530CLL_A1531CLL_A1529CLL_A1530
BXEN266265 BXE_B0573BXE_B1397BXE_B1397BXE_B0573BXE_B1397BXE_C1350BXE_B1397BXE_C1349BXE_B0894BXE_C1350BXE_B1397
BWEI315730 BCERKBAB4_0583BCERKBAB4_0582BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0582BCERKBAB4_0581BCERKBAB4_0582BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581BCERKBAB4_0582
BVIE269482 BCEP1808_1558BCEP1808_3838BCEP1808_6550BCEP1808_6552BCEP1808_6549BCEP1808_1389BCEP1808_1507BCEP1808_3381BCEP1808_1558BCEP1808_1389BCEP1808_0598
BTHU412694 BALH_0612BALH_0611BALH_0611BALH_0612BALH_0611BALH_0609BALH_0611BALH_0611BALH_0612BALH_0609BALH_0611
BTHU281309 BT9727_0580BT9727_0579BT9727_0579BT9727_0580BT9727_0579BT9727_0578BT9727_0579BT9727_0579BT9727_0580BT9727_0578BT9727_0579
BTHA271848 BTH_I2475BTH_I2433BTH_I2344BTH_I2342BTH_I2345BTH_I2434BTH_I2433BTH_I2433BTH_I2435BTH_II0211BTH_I1181
BSUI470137 BSUIS_B0991BSUIS_A1690BSUIS_A1690BSUIS_A1689BSUIS_A1690BSUIS_B0929BSUIS_A1690BSUIS_A1690BSUIS_B0850BSUIS_A1691BSUIS_A1690
BSUI204722 BR_A0996BR_1631BR_1631BR_1630BR_1631BR_A0936BR_1631BR_1631BR_A0858BR_1632BR_1631
BSUB BSU35960BSU35950BSU35950BSU35960BSU35950BSU35940BSU35950BSU35950BSU35960BSU35940BSU35950
BSP376 BRADO1809BRADO1807BRADO1810BRADO1394BRADO1819BRADO1809BRADO1807BRADO1394BRADO2362
BSP36773 BCEP18194_A4745BCEP18194_B0047BCEP18194_A4682BCEP18194_B2371BCEP18194_A4682BCEP18194_B0624BCEP18194_B0886BCEP18194_B0886BCEP18194_B0884BCEP18194_A4569BCEP18194_A3705
BPUM315750 BPUM_3268BPUM_3267BPUM_3267BPUM_3268BPUM_3267BPUM_3266BPUM_3267BPUM_3267BPUM_3268BPUM_3266BPUM_3267
BPSE320373 BURPS668_1853BURPS668_A0456BURPS668_A0457BURPS668_A0456BURPS668_A0286BURPS668_1909BURPS668_1909BURPS668_1907BURPS668_A0286BURPS668_3446
BPSE320372 BURPS1710B_A2179BURPS1710B_B1955BURPS1710B_B2112BURPS1710B_B2111BURPS1710B_B1956BURPS1710B_A2230BURPS1710B_A2230BURPS1710B_A2228BURPS1710B_B1956BURPS1710B_A3759
BPSE272560 BPSL1834BPSS0141BPSS0257BPSS0256BPSS0142BPSL1791BPSL1791BPSL1793BPSS0142BPSL2966
BOVI236 GBOORF1646GBOORF1646GBOORF1645GBOORF1646GBOORFA0965GBOORF1646GBOORF1646GBOORF1647GBOORF1646
BMEL359391 BAB1_1649BAB1_1649BAB1_1648BAB1_1649BAB2_0299BAB1_1649BAB1_1649BAB2_0377BAB2_1110BAB1_1649
BMEL224914 BMEI0392BMEI0392BMEI0393BMEI0392BMEII0361BMEI0392BMEI0392BMEII0435BMEII0145BMEI0392
BLIC279010 BL02443BL02442BL02442BL02443BL01748BL02441BL02442BL02442BL02443BL02441BL02442
BJAP224911 BLL5782BLR1122BLR3202BLR3200BLR3203BLR2270BLL2676BLR1122BLR3200BLR1122
BHAL272558 BH3901BH3731BH2321BH3732BH3731BH3730BH3731BH3731BH3732BH3730BH3731
BCLA66692 ABC3545ABC3545ABC3544ABC0411ABC3546ABC3545ABC3545ABC3544ABC3546ABC3545
BCER572264 BCA_0707BCA_0706BCA_0706BCA_0707BCA_0706BCA_0705BCA_0706BCA_0706BCA_0707BCA_0705BCA_0706
BCER405917 BCE_0737BCE_0736BCE_0736BCE_0737BCE_0736BCE_0735BCE_0736BCE_0736BCE_0737BCE_0735BCE_0736
BCER315749 BCER98_0564BCER98_0563BCER98_0563BCER98_0564BCER98_0563BCER98_0562BCER98_0563BCER98_0563BCER98_0564BCER98_0562BCER98_0563
BCER288681 BCE33L0579BCE33L0578BCE33L0578BCE33L0579BCE33L0578BCE33L0577BCE33L0578BCE33L0578BCE33L0579BCE33L0577BCE33L0578
BCER226900 BC_2960BC_0663BC_0663BC_0663BC_0662BC_0663BC_0663BC_0662BC_0663
BCEN331272 BCEN2424_1606BCEN2424_5639BCEN2424_5990BCEN2424_5992BCEN2424_5989BCEN2424_5039BCEN2424_4818BCEN2424_4818BCEN2424_4820BCEN2424_1425BCEN2424_0623
BCEN331271 BCEN_1126BCEN_5220BCEN_5625BCEN_5627BCEN_5624BCEN_3328BCEN_3549BCEN_3549BCEN_3547BCEN_0943BCEN_0140
BCAN483179 BCAN_B1015BCAN_A1668BCAN_A1668BCAN_A1667BCAN_A1668BCAN_B0956BCAN_A1668BCAN_A1668BCAN_B0875BCAN_A1669BCAN_A1668
BANT592021 BAA_0753BAA_0752BAA_0752BAA_0753BAA_0752BAA_0751BAA_0752BAA_0752BAA_0753BAA_0751BAA_0752
BANT568206 BAMEG_3917BAMEG_3918BAMEG_3918BAMEG_3917BAMEG_3918BAMEG_3919BAMEG_3918BAMEG_3918BAMEG_3917BAMEG_3919BAMEG_3918
BANT261594 GBAA0669GBAA0668GBAA0668GBAA0669GBAA0668GBAA0667GBAA0668GBAA0668GBAA0669GBAA0667GBAA0668
BANT260799 BAS0636BAS0635BAS0635BAS0636BAS0635BAS0634BAS0635BAS0635BAS0636BAS0634BAS0635
BAMY326423 RBAM_033130RBAM_033120RBAM_033120RBAM_033130RBAM_033120RBAM_033110RBAM_033120RBAM_033120RBAM_033130RBAM_033110RBAM_033120
BAMB398577 BAMMC406_1522BAMMC406_1253BAMMC406_5926BAMMC406_5924BAMMC406_5927BAMMC406_4967BAMMC406_4722BAMMC406_4722BAMMC406_4724BAMMC406_1344BAMMC406_0548
BAMB339670 BAMB_1503BAMB_6336BAMB_6195BAMB_6193BAMB_6196BAMB_4447BAMB_4199BAMB_4199BAMB_4201BAMB_4447BAMB_0524
BABO262698 BRUAB1_1619BRUAB1_1619BRUAB1_1618BRUAB1_1619BRUAB2_0297BRUAB1_1619BRUAB1_1619BRUAB2_0373BRUAB2_1088BRUAB1_1619
ASAL382245 ASA_1968ASA_1969ASA_2138ASA_2140ASA_2137ASA_0215ASA_1969ASA_1969ASA_1968ASA_2395ASA_2394
APLE434271 APJL_1703APJL_1702APJL_1702APJL_1703APJL_1702APJL_1451APJL_1702APJL_1702APJL_1703APJL_1701APJL_1702
APLE416269 APL_1672APL_1671APL_1671APL_1672APL_1671APL_1419APL_1671APL_1671APL_1672APL_1670APL_1671
AHYD196024 AHA_2312AHA_2311AHA_2311AHA_2312AHA_2311AHA_2310AHA_2311AHA_2311AHA_2312AHA_2310AHA_1905


Organism features enriched in list (features available for 147 out of the 157 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001965340112
Disease:Anthrax 0.003919344
Disease:Brucellosis 0.000968055
Disease:Bubonic_plague 0.000237866
Disease:Dysentery 0.000237866
Disease:Gastroenteritis 0.00010331013
Endospores:No 0.000397137211
Endospores:Yes 1.010e-62953
GC_Content_Range4:0-40 0.000029534213
GC_Content_Range4:40-60 5.082e-884224
GC_Content_Range7:0-30 0.0063961547
GC_Content_Range7:30-40 0.001907829166
GC_Content_Range7:50-60 4.419e-748107
Genome_Size_Range5:0-2 1.282e-156155
Genome_Size_Range5:2-4 0.001672336197
Genome_Size_Range5:4-6 1.591e-1078184
Genome_Size_Range5:6-10 6.922e-72747
Genome_Size_Range9:1-2 1.280e-116128
Genome_Size_Range9:2-3 0.004628320120
Genome_Size_Range9:4-5 0.00004834096
Genome_Size_Range9:5-6 0.00003003888
Genome_Size_Range9:6-8 0.00012042038
Genome_Size_Range9:8-10 0.001198079
Gram_Stain:Gram_Neg 0.003222997333
Habitat:Aquatic 0.00288651391
Habitat:Multiple 0.006056056178
Habitat:Terrestrial 0.00005091831
Motility:No 2.583e-618151
Motility:Yes 0.000014389267
Oxygen_Req:Aerobic 0.007415436185
Oxygen_Req:Anaerobic 0.002235915102
Oxygen_Req:Facultative 2.494e-1286201
Pathogenic_in:Human 0.000062373213
Pathogenic_in:No 0.000276440226
Shape:Coccus 0.0003835982
Shape:Rod 1.043e-13124347
Temp._range:Mesophilic 0.0027399130473



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 410
Effective number of orgs (counting one per cluster within 468 clusters): 321

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis0
SGOR29390 Streptococcus gordonii Challis1
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332092
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139412
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 231
PPUT76869 ncbi Pseudomonas putida GB-12
PPUT351746 ncbi Pseudomonas putida F12
PPUT160488 ncbi Pseudomonas putida KT24402
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255862
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE451
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B2
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3452
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   EG12520   EG12517   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   EG10059   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245 XAUT_2413
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0418
TWHI203267 TW329
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TPEN368408
TPAL243276
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275 TDE_2216
TCRU317025
TACI273075
SWOL335541 SWOL_0425
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSED425104
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SONE211586
SMUT210007
SMAR399550
SLOI323850
SLAC55218
SGOR29390 SGO_1897
SFUM335543
SEPI176280
SEPI176279
SELO269084
SDEN318161
SBAL402882
SBAL399599
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SACI56780
SACI330779
RTYP257363
RSPH349102 RSPH17025_0234
RSAL288705 RSAL33209_0263RSAL33209_0263
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_0867RCAS_0867
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811
PSP312153
PRUM264731 GFRORF2271
PPUT76869 PPUTGB1_3492PPUTGB1_3492
PPUT351746 PPUT_3236PPUT_3236
PPUT160488 PP_2454PP_2454
PPEN278197
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198 PIN_A0148
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PDIS435591 BDI_1484
PCRY335284
PCAR338963
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP146
MHYO262722 MHP7448_0233
MHYO262719 MHJ_0226
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LMES203120
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
JSP375286
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMAR272569
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154 GFO_0006
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_7032
FSP106370
FRANT
FPHI484022
FNUC190304 FN1166FN1166
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CSP501479 CSE45_5381
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC31964 CMS0136
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CABO218497
BTUR314724
BTRI382640
BTHE226186 BT_1754
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BHER314723
BHEN283166
BGAR290434
BFRA295405 BF3339
BFRA272559 BF3174
BCIC186490
BBUR224326
BBRO257310 BB2712
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
APHA212042
APER272557
AORE350688
ANAE240017
AMAR329726 AM1_4844
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACEL351607 ACEL_1049ACEL_1049
ABUT367737
ABOR393595
ABAU360910
ABAC204669 ACID345_0905ACID345_0906
AAEO224324


Organism features enriched in list (features available for 384 out of the 410 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000236958112
Disease:Gastroenteritis 0.0015831313
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00963231111
Disease:Wide_range_of_infections 0.00963231111
Endospores:No 9.242e-6162211
Endospores:Yes 1.146e-71753
GC_Content_Range4:0-40 7.022e-9171213
GC_Content_Range4:40-60 0.0009034131224
GC_Content_Range4:60-100 0.001191981145
GC_Content_Range7:0-30 0.00928533847
GC_Content_Range7:30-40 1.297e-6133166
GC_Content_Range7:50-60 0.000050253107
GC_Content_Range7:60-70 0.003420576134
Genome_Size_Range5:0-2 5.045e-25149155
Genome_Size_Range5:2-4 0.0004272147197
Genome_Size_Range5:4-6 3.960e-1776184
Genome_Size_Range5:6-10 3.757e-91247
Genome_Size_Range9:0-1 9.183e-62727
Genome_Size_Range9:1-2 8.472e-19122128
Genome_Size_Range9:2-3 0.000174095120
Genome_Size_Range9:4-5 2.045e-74196
Genome_Size_Range9:5-6 3.418e-83588
Genome_Size_Range9:6-8 2.562e-71038
Genome_Size_Range9:8-10 0.008042629
Gram_Stain:Gram_Neg 0.0043969206333
Habitat:Aquatic 0.00120407291
Habitat:Host-associated 0.0008126152206
Habitat:Multiple 0.000012595178
Habitat:Specialized 0.00527424353
Habitat:Terrestrial 0.00007191031
Motility:No 0.0002956116151
Motility:Yes 5.332e-6151267
Optimal_temp.:30-37 0.00462161718
Oxygen_Req:Anaerobic 0.002060579102
Oxygen_Req:Facultative 7.051e-7106201
Shape:Coccus 0.00035566782
Shape:Irregular_coccus 0.00073031717
Shape:Rod 4.752e-17183347
Shape:Sphere 0.00316881819
Shape:Spiral 7.797e-63334
Temp._range:Mesophilic 0.0029829300473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 47
Effective number of orgs (counting one per cluster within 468 clusters): 39

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TMAR243274 ncbi Thermotoga maritima MSB8 2.947e-684111
SAGA211110 ncbi Streptococcus agalactiae NEM316 4.075e-686611
SAGA208435 ncbi Streptococcus agalactiae 2603V/R 4.234e-686911
SAGA205921 ncbi Streptococcus agalactiae A909 4.288e-687011
LLAC272623 ncbi Lactococcus lactis lactis Il1403 6.881e-690811
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.000011595111
LACI272621 ncbi Lactobacillus acidophilus NCFM 0.000019268410
CTET212717 ncbi Clostridium tetani E88 0.0000205100211
CNOV386415 ncbi Clostridium novyi NT 0.0000513108911
SHAE279808 ncbi Staphylococcus haemolyticus JCSC1435 0.0000585110211
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 15305 0.0000615110711
BXEN266265 ncbi Burkholderia xenovorans LB400 0.0000788113211
PMOB403833 ncbi Petrotoga mobilis SJ95 0.000091680110
TPET390874 ncbi Thermotoga petrophila RKU-1 0.000136583410
TSP1755 Thermoanaerobacter sp. 0.0002293124711
RXYL266117 ncbi Rubrobacter xylanophilus DSM 9941 0.0003540129711
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB4 0.0003725130311
CDIF272563 ncbi Clostridium difficile 630 0.0003986131111
MTHE264732 ncbi Moorella thermoacetica ATCC 39073 0.0004371132211
CBOT515621 ncbi Clostridium botulinum Ba4 str. 657 0.0004829133411
SERY405948 ncbi Saccharopolyspora erythraea NRRL 2338 0.0012405145311
SAVE227882 ncbi Streptomyces avermitilis MA-4680 0.0014643147511
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0017498149911
HINF374930 ncbi Haemophilus influenzae PittEE 0.0017757150111
TLET416591 ncbi Thermotoga lettingae TMO 0.00218317999
BSUI470137 ncbi Brucella suis ATCC 23445 0.0024777154711
HSOM228400 ncbi Haemophilus somnus 2336 0.0028753156811
BCAN483179 ncbi Brucella canis ATCC 23365 0.0029160157011
BSUI204722 ncbi Brucella suis 1330 0.0030413157611
HINF281310 ncbi Haemophilus influenzae 86-028NP 0.0031058157911
BCER315749 ncbi Bacillus cytotoxicus NVH 391-98 0.0031938158311
BHAL272558 ncbi Bacillus halodurans C-125 0.0033531159011
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0035441159811
HINF71421 ncbi Haemophilus influenzae Rd KW20 0.0036937160411
GKAU235909 ncbi Geobacillus kaustophilus HTA426 0.0043220162711
TSP28240 Thermotoga sp. 0.00457628709
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 33223 0.0048218119910
BAMY326423 ncbi Bacillus amyloliquefaciens FZB42 0.0050799165111
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-2 0.0057635167011
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B 0.0071255124810
BSUB ncbi Bacillus subtilis subtilis 168 0.0083463172711
VEIS391735 ncbi Verminephrobacter eiseniae EF01-2 0.0083463172711
BTHU412694 ncbi Bacillus thuringiensis Al Hakam 0.0088952173711
CGLU196627 ncbi Corynebacterium glutamicum ATCC 13032 0.00910669429
BCER288681 ncbi Bacillus cereus E33L 0.0092401174311
BLIC279010 ncbi Bacillus licheniformis ATCC 14580 0.0096578175011
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-27 0.0097803175211


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   EG12520   EG12517   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   EG10059   
TMAR243274 TM_0958TM_0955TM_0955TM_0958TM_0955TM_0115TM_0955TM_0955TM_0958TM_0956TM_0112
SAGA211110 GBS0113GBS0114GBS0114GBS0113GBS0114GBS0115GBS0114GBS0114GBS0113GBS0115GBS0114
SAGA208435 SAG_0114SAG_0115SAG_0115SAG_0114SAG_0115SAG_0116SAG_0115SAG_0115SAG_0114SAG_0116SAG_0115
SAGA205921 SAK_0166SAK_0167SAK_0167SAK_0166SAK_0167SAK_0168SAK_0167SAK_0167SAK_0166SAK_0168SAK_0167
LLAC272623 L82310L83296L83296L82310L83296L84240L83296L83296L82310L84240L83296
LCAS321967 LSEI_0310LSEI_0309LSEI_0309LSEI_0310LSEI_0309LSEI_0308LSEI_0309LSEI_0309LSEI_0310LSEI_0308LSEI_0309
LACI272621 LBA1481LBA1482LBA1481LBA1482LBA1483LBA1482LBA1482LBA1481LBA1483LBA1482
CTET212717 CTC_00907CTC_00906CTC_02349CTC_02347CTC_02349CTC_00905CTC_02349CTC_02349CTC_02347CTC_02350CTC_02349
CNOV386415 NT01CX_0162NT01CX_0163NT01CX_0163NT01CX_0162NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0162NT01CX_0164NT01CX_0163
SHAE279808 SH0179SH0178SH0178SH0179SH0178SH0177SH0178SH0178SH0179SH0177SH0178
SSAP342451 SSP1392SSP1393SSP1393SSP1392SSP1393SSP1394SSP1393SSP1393SSP1392SSP1394SSP1393
BXEN266265 BXE_B0573BXE_B1397BXE_B1397BXE_B0573BXE_B1397BXE_C1350BXE_B1397BXE_C1349BXE_B0894BXE_C1350BXE_B1397
PMOB403833 PMOB_0923PMOB_1602PMOB_0922PMOB_0923PMOB_0922PMOB_1601PMOB_1602PMOB_0922PMOB_0923PMOB_0922
TPET390874 TPET_1794TPET_0812TPET_1793TPET_1794TPET_0809TPET_1793TPET_1793TPET_1794TPET_0809TPET_0812
TSP1755 TETH514_0166TETH514_0158TETH514_0165TETH514_0166TETH514_0165TETH514_0164TETH514_0165TETH514_0165TETH514_0166TETH514_0164TETH514_0990
RXYL266117 RXYL_0948RXYL_1889RXYL_3002RXYL_0948RXYL_3002RXYL_3003RXYL_3002RXYL_0947RXYL_0948RXYL_0946RXYL_3002
TTEN273068 TTE0765TTE0205TTE0205TTE0206TTE0205TTE0763TTE0764TTE0205TTE0206TTE0204TTE0764
CDIF272563 CD0300CD1588CD0302CD1589CD0302CD0301CD1588CD0302CD0300CD0301CD0302
MTHE264732 MOTH_0612MOTH_0614MOTH_0614MOTH_0699MOTH_0614MOTH_0613MOTH_0614MOTH_0614MOTH_0612MOTH_0613MOTH_0614
CBOT515621 CLJ_B1315CLJ_B1313CLJ_B1313CLJ_B1315CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1315CLJ_B1312CLJ_B1313
SERY405948 SACE_5660SACE_5660SACE_2988SACE_5660SACE_5660SACE_5659SACE_1882SACE_5660SACE_5660SACE_5659SACE_5660
SAVE227882 SAV971SAV1827SAV1827SAV971SAV968SAV7416SAV5318SAV5318SAV5318SAV7416SAV968
OIHE221109 OB2572OB2573OB2573OB2572OB2573OB2574OB2573OB2573OB2572OB2574OB2573
HINF374930 CGSHIEE_00470CGSHIEE_06515CGSHIEE_00475CGSHIEE_00470CGSHIEE_00475CGSHIEE_07945CGSHIEE_00475CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480CGSHIEE_00475
TLET416591 TLET_0359TLET_1328TLET_0389TLET_0390TLET_0185TLET_1328TLET_1325TLET_1327TLET_0358
BSUI470137 BSUIS_B0991BSUIS_A1690BSUIS_A1690BSUIS_A1689BSUIS_A1690BSUIS_B0929BSUIS_A1690BSUIS_A1690BSUIS_B0850BSUIS_A1691BSUIS_A1690
HSOM228400 HSM_0556HSM_0091HSM_0822HSM_0092HSM_0432HSM_0557HSM_0558HSM_0091HSM_0092HSM_0090HSM_0091
BCAN483179 BCAN_B1015BCAN_A1668BCAN_A1668BCAN_A1667BCAN_A1668BCAN_B0956BCAN_A1668BCAN_A1668BCAN_B0875BCAN_A1669BCAN_A1668
BSUI204722 BR_A0996BR_1631BR_1631BR_1630BR_1631BR_A0936BR_1631BR_1631BR_A0858BR_1632BR_1631
HINF281310 NTHI0632NTHI0631NTHI0631NTHI0632NTHI0631NTHI0630NTHI0631NTHI0631NTHI0632NTHI0630NTHI0631
BCER315749 BCER98_0564BCER98_0563BCER98_0563BCER98_0564BCER98_0563BCER98_0562BCER98_0563BCER98_0563BCER98_0564BCER98_0562BCER98_0563
BHAL272558 BH3901BH3731BH2321BH3732BH3731BH3730BH3731BH3731BH3732BH3730BH3731
BPUM315750 BPUM_3268BPUM_3267BPUM_3267BPUM_3268BPUM_3267BPUM_3266BPUM_3267BPUM_3267BPUM_3268BPUM_3266BPUM_3267
HINF71421 HI_0504HI_0503HI_0503HI_0504HI_0503HI_0823HI_0503HI_0503HI_0504HI_0502HI_0503
GKAU235909 GK1896GK3227GK1893GK3226GK3227GK3228GK3227GK3227GK3226GK3228GK3227
TSP28240 TRQ2_0833TRQ2_0835TRQ2_0833TRQ2_0974TRQ2_0975TRQ2_0974TRQ2_0974TRQ2_0975TRQ2_0835
TPSE340099 TETH39_2038TETH39_2039TETH39_2039TETH39_2038TETH39_2039TETH39_2040TETH39_2039TETH39_2039TETH39_2038TETH39_2040
BAMY326423 RBAM_033130RBAM_033120RBAM_033120RBAM_033130RBAM_033120RBAM_033110RBAM_033120RBAM_033120RBAM_033130RBAM_033110RBAM_033120
GTHE420246 GTNG_3170GTNG_3171GTNG_3171GTNG_3170GTNG_1814GTNG_3172GTNG_3171GTNG_3171GTNG_3170GTNG_3172GTNG_3171
CBOT508765 CLL_A1530CLL_A1530CLL_A1531CLL_A1530CLL_A1529CLL_A1530CLL_A1530CLL_A1531CLL_A1529CLL_A1530
BSUB BSU35960BSU35950BSU35950BSU35960BSU35950BSU35940BSU35950BSU35950BSU35960BSU35940BSU35950
VEIS391735 VEIS_1480VEIS_3417VEIS_2045VEIS_2026VEIS_2687VEIS_1088VEIS_2045VEIS_2045VEIS_2682VEIS_1088VEIS_3775
BTHU412694 BALH_0612BALH_0611BALH_0611BALH_0612BALH_0611BALH_0609BALH_0611BALH_0611BALH_0612BALH_0609BALH_0611
CGLU196627 CG1412CG1412CG1413CG1412CG1411CG1412CG1412CG1413CG1412
BCER288681 BCE33L0579BCE33L0578BCE33L0578BCE33L0579BCE33L0578BCE33L0577BCE33L0578BCE33L0578BCE33L0579BCE33L0577BCE33L0578
BLIC279010 BL02443BL02442BL02442BL02443BL01748BL02441BL02442BL02442BL02443BL02441BL02442
BTHU281309 BT9727_0580BT9727_0579BT9727_0579BT9727_0580BT9727_0579BT9727_0578BT9727_0579BT9727_0579BT9727_0580BT9727_0578BT9727_0579


Organism features enriched in list (features available for 45 out of the 47 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00040461692
Disease:Sotto_disease 0.005835422
Disease:and_meningitis 0.005835422
Disease:chronic_bronchitis 0.000431933
Disease:fever 0.005835422
Disease:otitis_media 0.001602434
Disease:septicemia 0.001602434
Disease:sinusitis 0.001602434
Disease:speticemia 0.005835422
Endospores:Yes 2.251e-112053
GC_Content_Range4:0-40 0.003257325213
GC_Content_Range7:30-40 0.007447120166
GC_Content_Range7:60-70 0.00049292134
Genome_Size_Range5:2-4 0.000350926197
Gram_Stain:Gram_Neg 0.000162814333
Gram_Stain:Gram_Pos 1.629e-930150
Habitat:Terrestrial 0.0011319831
Optimal_temp.:65 0.005835422



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTITOLCAT-PWY (galactitol degradation)73660.5472
PWY-6196 (serine racemization)102770.5125
PWY-6374 (vibriobactin biosynthesis)77630.4897
XYLCAT-PWY (xylose degradation I)2171160.4758
RIBOKIN-PWY (ribose degradation)2791340.4735
GLUTAMINDEG-PWY (glutamine degradation I)1911070.4720
GLUCUROCAT-PWY (β-D-glucuronide and D-glucuronate degradation)2081110.4593
GLUTDEG-PWY (glutamate degradation II)1941060.4560
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121780.4440
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50430.4137
GALACTCAT-PWY (D-galactonate degradation)104670.4044
IDNCAT-PWY (L-idonate degradation)2461150.4009



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7340   EG12520   EG12517   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   EG10059   
G73420.9994590.9993460.9995560.9994180.9993590.9994340.9994560.9996220.999360.999301
G73400.9995550.9995280.9995620.9994260.9996810.9996660.999590.9995270.999513
EG125200.9997540.9998260.9994480.9996960.9996560.9996340.9995290.999517
EG125170.9997490.999420.9996180.9996140.9997240.9995580.999498
EG124390.9993540.9996320.9996270.9996250.9994780.999564
EG119590.999590.9995530.9994360.9996740.99937
EG119580.9997910.9996860.9996370.999577
EG108160.9997490.9997110.999525
EG108150.9995660.999476
EG108140.999499
EG10059



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PAIRWISE BLAST SCORES:

  G7342   G7340   EG12520   EG12517   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   EG10059   
G73420.0f0-------9.5e-9--
G7340-0.0f0--1.3e-27--1.9e-33---
EG12520-1.2e-220.0f0----4.3e-27---
EG12517---0.0f0----8.6e-29--
EG12439-4.6e-30--0.0f0--1.7e-30---
EG11959-----0.0f0---4.0e-95-
EG11958------0.0f06.9e-43---
EG10816-------0.0f0---
EG10815---8.6e-29----0.0f0--
EG10814---------0.0f0-
EG10059------1.3e-132.0e-15--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-60-CPLX (YphD/YphE/YphF ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.182, average score: 0.999)
  Genes in pathway or complex:
             0.9993 0.9989 G7341 (yphE) YPHE-MONOMER (YphE)
   *in cand* 0.9995 0.9993 G7342 (yphF) G7342-MONOMER (YphF)
   *in cand* 0.9996 0.9994 G7340 (yphD) YPHD-MONOMER (YphD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10059 (araH) ARAH-MONOMER (high-affinity L-arabinose transport protein (ABC superfamily, membrane))
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9997 0.9994 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9996 0.9994 EG12439 (yjfF) YJFF-MONOMER (YjfF)
   *in cand* 0.9996 0.9994 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)

- ABC-42-CPLX (D-allose ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.182, average score: 0.993)
  Genes in pathway or complex:
             0.7525 0.1361 EG12458 (alsB) YJCX-MONOMER (AlsB)
   *in cand* 0.9997 0.9994 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10059 (araH) ARAH-MONOMER (high-affinity L-arabinose transport protein (ABC superfamily, membrane))
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9996 0.9994 EG12439 (yjfF) YJFF-MONOMER (YjfF)
   *in cand* 0.9996 0.9994 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9996 0.9994 G7340 (yphD) YPHD-MONOMER (YphD)
   *in cand* 0.9995 0.9993 G7342 (yphF) G7342-MONOMER (YphF)

- ABC-28-CPLX (ribose ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.273, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10059 (araH) ARAH-MONOMER (high-affinity L-arabinose transport protein (ABC superfamily, membrane))
   *in cand* 0.9997 0.9994 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9996 0.9994 EG12439 (yjfF) YJFF-MONOMER (YjfF)
   *in cand* 0.9996 0.9994 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9996 0.9994 G7340 (yphD) YPHD-MONOMER (YphD)
   *in cand* 0.9995 0.9993 G7342 (yphF) G7342-MONOMER (YphF)

- ABC-46-CPLX (galactose ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.273, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9994 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)
             0.9996 0.9993 EG12518 (ytfR) YTFR-MONOMER (YtfR)
   *in cand* 0.9996 0.9994 EG12439 (yjfF) YJFF-MONOMER (YjfF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10059 (araH) ARAH-MONOMER (high-affinity L-arabinose transport protein (ABC superfamily, membrane))
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9997 0.9994 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9996 0.9994 G7340 (yphD) YPHD-MONOMER (YphD)
   *in cand* 0.9995 0.9993 G7342 (yphF) G7342-MONOMER (YphF)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12439 EG12517 EG12520 (centered at EG12520)
EG10814 EG10815 EG10816 (centered at EG10816)
EG10059 (centered at EG10059)
EG11958 EG11959 (centered at EG11959)
G7340 G7342 (centered at G7342)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7342   G7340   EG12520   EG12517   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   EG10059   
178/623163/623192/623198/623191/623183/623194/623177/623193/623176/623182/623
AAUR290340:2:Tyes515-0515181-0517515-0
AAVE397945:0:Tyes6-160---1909--
ABAC204669:0:Tyes------0--1-
ACAU438753:0:Tyes--13-01-3--
ACEL351607:0:Tyes-0--------0
ACRY349163:8:Tyes0-173717191736-2562561-1736
AHYD196024:0:Tyes4003993994003993983993994003980
AMAR329726:9:Tyes0----------
AMET293826:0:Tyes-00-3267128129129-2306129
APLE416269:0:Tyes2732722722732720272272273271272
APLE434271:0:Tno2732722722732720272272273271272
ASAL382245:5:Tyes16981699186118631860016991699169821102109
ASP1667:3:Tyes022-2-22--89
AVAR240292:3:Tyes-22-212201-
BABO262698:0:Tno-----0--75744-
BABO262698:1:Tno-1101-11--1
BAMB339670:1:Tno-143203------
BAMB339670:2:Tno-----246002246-
BAMB339670:3:Tno1008---------0
BAMB398577:1:Tno--203------
BAMB398577:2:Tno-----238002--
BAMB398577:3:Tno987715-------8030
BAMY326423:0:Tyes21121011201
BANT260799:0:Tno21121011201
BANT261594:2:Tno21121011201
BANT568206:2:Tyes01101211021
BANT592021:2:Tno21121011201
BBRO257310:0:Tyes0----------
BCAN483179:0:Tno133----77--0--
BCAN483179:1:Tno-1101-11-21
BCEN331271:0:Tno--130------
BCEN331271:1:Tno-1876---0221221219--
BCEN331271:2:Tno1006--------8180
BCEN331272:1:Tyes--130------
BCEN331272:2:Tyes-820---221002--
BCEN331272:3:Tyes982--------8010
BCER226900:1:Tyes225611-1011-01
BCER288681:0:Tno21121011201
BCER315749:1:Tyes21121011201
BCER405917:1:Tyes21121011201
BCER572264:1:Tno21121011201
BCLA66692:0:Tyes-3173317331720317431733173317231743173
BFRA272559:1:Tyes---0-------
BFRA295405:0:Tno---0-------
BHAL272558:0:Tyes15951425014261425142414251425142614241425
BJAP224911:0:Fyes469502094209220951159156802092-0
BLIC279010:0:Tyes33013300330033010329933003300330132993300
BLON206672:0:Tyes--203-----2
BMAL243160:1:Tno--0--100211491148
BMAL320388:0:Tno---0-------
BMAL320388:1:Tno--1212--121312121212121410
BMAL320389:0:Tyes---0-------
BMAL320389:1:Tyes--2--122023942395
BMEL224914:0:Tno-----227--3020-
BMEL224914:1:Tno-0010-00--0
BMEL359391:0:Tno-----0--75740-
BMEL359391:1:Tno-1101-11--1
BOVI236:0:Tyes-----0-----
BOVI236:1:Tyes-1101-11-21
BPSE272560:0:Tyes--01161151---1-
BPSE272560:1:Tyes43-----002-1197
BPSE320372:0:Tno--01571561---1-
BPSE320372:1:Tno0-----515149-1474
BPSE320373:0:Tno--1691701690---0-
BPSE320373:1:Tno0-----555553-1532
BPUM315750:0:Tyes21121011201
BSP36773:1:Tyes-0-2324-577840840838--
BSP36773:2:Tyes1061-993-993----8790
BSP376:0:Tyes--39439239504043943920907
BSUB:0:Tyes21121011201
BSUI204722:0:Tyes134----77--0--
BSUI204722:1:Tyes-1101-11-21
BSUI470137:0:Tno136----77--0--
BSUI470137:1:Tno-1101-11-21
BTHA271848:0:Tno---------0-
BTHA271848:1:Tno127012281139113711401229122812281230-0
BTHE226186:0:Tyes---0-------
BTHU281309:1:Tno21121011201
BTHU412694:1:Tno21121011201
BVIE269482:5:Tyes--130------
BVIE269482:6:Tyes-452-----0---
BVIE269482:7:Tyes955----787904-9557870
BWEI315730:4:Tyes21121011201
BXEN266265:0:Tyes-----1-0-1-
BXEN266265:1:Tyes810008100-0-493-0
CACE272562:1:Tyes0--0----0--
CAULO:0:Tyes-2-021220--
CBEI290402:0:Tyes504-130506--3506-
CBOT508765:1:Tyes-1121011201
CBOT515621:2:Tyes31131011301
CDIF272563:1:Tyes01321213222113212012
CGLU196627:0:Tyes-11210112-1
CJAP155077:0:Tyes--203------
CMIC31964:2:Tyes----0------
CMIC443906:2:Tyes--130------
CNOV386415:0:Tyes01101211021
CPER195102:1:Tyes--1-1211021
CPER195103:0:Tno--0-0100-10
CPER289380:3:Tyes---0-2--021
CPHY357809:0:Tyes0---21258691--8692125
CSAL290398:0:Tyes10010-001-682
CSP501479:2:Fyes-0---------
CTET212717:0:Tyes21132613251326013261326132513271326
CVIO243365:0:Tyes01101211021
DGEO319795:0:Tyes-279-1602790-279-0-
DRED349161:0:Tyes0-101-11021
DSHI398580:5:Tyes3----21--20
ECAR218491:0:Tyes-1429142934290014771202283
ECOL199310:0:Tno748746297029682971274027392332233323310
ECOL316407:0:Tno648646230923072310216521641605160416060
ECOL331111:6:Tno66966725542552255529920542054205520530
ECOL362663:0:Tno713711263226302633248215131837211321120
ECOL364106:1:Tno768766271627142717256421962196219721950
ECOL405955:2:Tyes740738258825862589238223812013201420120
ECOL409438:6:Tyes720718247624742477232223211949195019480
ECOL413997:0:Tno582580227722752278213521341789179017880
ECOL439855:4:Tno13951393331133093312316131602758275927570
ECOL469008:0:Tno0226402642263927822783314031393141607
ECOL481805:0:Tno0226492651264828072808313631353137606
ECOL585034:0:Tno61961724242422242524819251925192619240
ECOL585035:0:Tno742740275727552758253921522152215321510
ECOL585055:0:Tno74574326552653265631721072107210821060
ECOL585056:2:Tno68568325642562256529820842084208520830
ECOL585057:0:Tno15711569353835361569335633553189319031880
ECOL585397:0:Tno800798285028482850261026092229223022280
ECOL83334:0:Tno82882626852683268644625462137213821360
ECOLI:0:Tno664662236623642367222122201881188218800
ECOO157:0:Tno79479226212619262241224772115211621140
EFER585054:1:Tyes13862897314631443147312231232897289828960
ESP42895:1:Tyes24813868129127130103868386738692201
FNUC190304:0:Tyes-----0---0-
FSP1855:0:Tyes--------0--
GFOR411154:0:Tyes---0-------
GKAU235909:1:Tyes31359013581359136013591359135813601359
GTHE420246:1:Tyes13411342134213410134313421342134113431342
GVIO251221:0:Tyes09369360936-9369360-936
HAUR316274:2:Tyes-1551140-1551-87--
HCHE349521:0:Tyes--125401254112541254125211254
HINF281310:0:Tyes21121011201
HINF374930:0:Tyes01054101131011021
HINF71421:0:Tno2112131811201
HMOD498761:0:Tyes2-12--11201
HSOM205914:1:Tyes18109889909881820183181-988
HSOM228400:0:Tno475174323454764771201
JSP290400:1:Tyes500505-500-501502-5000505
KPNE272620:2:Tyes0266131203118312140342661266126622660759
KRAD266940:2:Fyes-0010-0---0
LACI272621:0:Tyes0-101211021
LCAS321967:1:Tyes21121011201
LCHO395495:0:Tyes0-14012497-24962381249514002496-
LLAC272622:5:Tyes0--0-1--01-
LLAC272623:0:Tyes01101211021
LXYL281090:0:Tyes0--02---0--
MHYO262719:0:Tyes----0------
MHYO262722:0:Tno----0------
MHYO295358:0:Tno----0------
MLOT266835:2:Tyes5284152820528236588724753020041
MSME246196:0:Tyes22732275130-244524451377-1371
MSP164756:1:Tno1-20--2-0--
MSP164757:0:Tno1-20--2-0--
MSP189918:2:Tyes1-20--2-0--
MSP266779:3:Tyes--20212-0-2
MSP400668:0:Tyes1268016911693169011812661191268-119
MSUC221988:0:Tyes160414214216041602604142142160410
MTHE264732:0:Tyes022762122012
NSP35761:1:Tyes----312-0---724
OANT439375:4:Tyes------716716-0-
OANT439375:5:Tyes201148115011471--2-0
OIHE221109:0:Tyes01101211021
PACN267747:0:Tyes-0010-001-0
PAER208963:0:Tyes0--0----0--
PAER208964:0:Tno0--0----0--
PDIS435591:0:Tyes---0-------
PENT384676:0:Tyes0--0----0--
PFLU205922:0:Tyes0--0-12231-022322231
PFLU216595:1:Tyes1111-20111052413741374137612032
PFLU220664:0:Tyes490-492490-4914924920491-
PING357804:0:Tyes21231121011201
PINT246198:1:Tyes---0-------
PLUM243265:0:Fyes-1121011201
PMOB403833:0:Tyes165901065865901-0
PMUL272843:1:Tyes11721122501225117311021
PNAP365044:8:Tyes--2---2-0--
PPRO298386:1:Tyes2112131411201
PPUT160488:0:Tno0-------0--
PPUT351746:0:Tyes0-------0--
PPUT76869:0:Tno0-------0--
PRUM264731:0:Tyes---0-------
PSP117:0:Tyes1464330-23302-
PSP296591:2:Tyes--1---1-0--
PSYR205918:0:Tyes01802180224971802249618021802138424961603
PSYR223283:2:Tyes0-11070110691068106801069238
RCAS383372:0:Tyes---0----0--
RDEN375451:4:Tyes---1625024252424--2425-
RETL347834:0:Tyes-----0-----
RETL347834:4:Tyes-------0---
RETL347834:5:Tyes17762553146514631466-592-033433052
REUT264198:2:Tyes2---0---2-0
REUT264198:3:Tyes--0--100-1-
REUT381666:1:Tyes--1-1011-01
RFER338969:1:Tyes269200-0269002691146426900
RLEG216596:2:Tyes20---------
RLEG216596:6:Tyes--6326306337030097229012479
RRUB269796:1:Tyes-00-0-00--1111
RSAL288705:0:Tyes-0--0------
RSOL267608:0:Tyes-0---------
RSOL267608:1:Tyes0-240238-239-24002391778
RSP101510:3:Fyes022-2325322032532
RSP357808:0:Tyes---1741-0--17410-
RSPH272943:3:Tyes022-2------
RSPH349101:1:Tno022-2------
RSPH349102:5:Tyes---0-------
RXYL266117:0:Tyes2946204722047204820471202047
SAGA205921:0:Tno01101211021
SAGA208435:0:Tno01101211021
SAGA211110:0:Tyes01101211021
SAVE227882:1:Fyes386486430653644144414441465360
SBOY300268:1:Tyes13891387294929502948101525252525295023470
SCO:2:Fyes34934941983493490349349349348-
SDEG203122:0:Tyes--203-----2
SDYS300267:1:Tyes95126852917-2918280626852685280801
SENT209261:0:Tno02838283828372838283928382838283728392838
SENT220341:0:Tno01370137013691370137113701370136913711370
SENT295319:0:Tno0--2936-2935--29362935-
SENT321314:2:Tno01613161316141613161216131613161416121613
SENT454169:2:Tno01732173217331732173117321732173317311732
SERY405948:0:Tyes36643664107736643664366303664366436633664
SFLE198214:0:Tyes27261522622264226127118271827-2710
SFLE373384:0:Tno6236212209-220826317201720-19370
SGLO343509:3:Tyes3580011830359001359-
SGOR29390:0:Tyes0----------
SHAE279808:0:Tyes21121011201
SHAL458817:0:Tyes21148421148311201
SHIGELLA:0:Tno2616112218-167626016761676-2600
SMED366394:1:Tyes------0----
SMED366394:2:Tyes115011481277127512781149-1641121-0
SMED366394:3:Tyes---------0-
SMEL266834:1:Tyes617615691689692616-0583-150
SMEL266834:2:Tyes------0--623-
SPEA398579:0:Tno21183921184011201
SPRO399741:1:Tyes32403238378337853782039263926392539271238
SSAP342451:2:Tyes01101211021
SSON300269:1:Tyes1345134330203018302193525672567301825660
SSP292414:1:Tyes------0---15
SSP292414:2:Tyes-----0-----
SSP644076:4:Fyes-33-32330-3
SSP94122:1:Tyes--203---0--
STHE292459:0:Tyes1598--1598-15971596-015971596
STYP99287:1:Tyes01684168416851684168316841684168516831684
SWOL335541:0:Tyes----------0
TDEN243275:0:Tyes-----0-----
TLET416591:0:Tyes174-1155204205-0115511521154173
TMAR243274:0:Tyes82882582582882538258258288260
TPET390874:0:Tno9873986987-098698698703
TPSE340099:0:Tyes0110121102-
TROS309801:0:Tyes-----0180--0-
TSP1755:0:Tyes8078767786814
TSP28240:0:Tyes02-0139140139139-1402
TTEN273068:0:Tyes5321121530531120531
TWHI203267:0:Tyes----0------
TWHI218496:0:Tno----0------
VCHO:0:Tyes-----0-----
VCHO:1:Fyes21121-11201
VCHO345073:0:Tno01101-11021
VCHO345073:1:Tno-----0-----
VEIS391735:1:Tyes377230794292515830942942157802660
VFIS312309:2:Tyes21121011201
VPAR223926:0:Tyes0110121102588
VVUL196600:1:Tyes4174164164174160416416417415416
VVUL216895:0:Tno21121011201
XAUT78245:1:Tyes---0-------
YENT393305:1:Tyes27151143141144271411201947
YPES187410:5:Tno13843578203305335781386138423541791
YPES214092:3:Tno1492291328542856285302913149014925391249
YPES349746:2:Tno15483829304302305038291546154827722035
YPES360102:3:Tyes191537382031963738191319157061534
YPES377628:2:Tno20763625203316136252074207624601705
YPES386656:2:Tno1357277829722974297102778135613579061
YPSE273123:2:Tno14333716203315037162445244714342089
YPSE349747:2:Tno1343383820365538381345134322951718



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