CANDIDATE ID: 33

CANDIDATE ID: 33

NUMBER OF GENES: 10
AVERAGE SCORE:    9.9954978e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    3.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7340 (yphD) (b2546)
   Products of gene:
     - YPHD-MONOMER (YphD)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- G6801 (lsrC) (b1514)
   Products of gene:
     - YDEY-MONOMER (LsrC)
     - ABC-58-CPLX (LsrA/LsrC/LsrD/LsrB ABC transporter)

- G6800 (lsrA) (b1513)
   Products of gene:
     - YDEX-MONOMER (LsrA)
     - ABC-58-CPLX (LsrA/LsrC/LsrD/LsrB ABC transporter)

- EG12520 (ytfT) (b4230)
   Products of gene:
     - YTFT-MONOMER (YtfT)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12439 (yjfF) (b4231)
   Products of gene:
     - YJFF-MONOMER (YjfF)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG11959 (alsA) (b4087)
   Products of gene:
     - YJCW-MONOMER (AlsA)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG11958 (alsC) (b4086)
   Products of gene:
     - YJCV-MONOMER (AlsC)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG10816 (rbsC) (b3750)
   Products of gene:
     - RBSC-MONOMER (RbsC)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10815 (rbsB) (b3751)
   Products of gene:
     - RBSB-MONOMER (RbsB)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10814 (rbsA) (b3749)
   Products of gene:
     - RBSA-MONOMER (RbsA)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 150
Effective number of orgs (counting one per cluster within 468 clusters): 93

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175810
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295310
YPES386656 ncbi Yersinia pestis Pestoides F10
YPES377628 ncbi Yersinia pestis Nepal51610
YPES360102 ncbi Yersinia pestis Antiqua10
YPES349746 ncbi Yersinia pestis Angola10
YPES214092 ncbi Yersinia pestis CO9210
YPES187410 ncbi Yersinia pestis KIM 1010
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808110
VVUL216895 ncbi Vibrio vulnificus CMCP610
VVUL196600 ncbi Vibrio vulnificus YJ01610
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063310
VFIS312309 ncbi Vibrio fischeri ES11410
VEIS391735 ncbi Verminephrobacter eiseniae EF01-210
VCHO345073 ncbi Vibrio cholerae O39510
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696110
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB410
TSP1755 Thermoanaerobacter sp.10
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 3322310
TPET390874 ncbi Thermotoga petrophila RKU-19
TMAR243274 ncbi Thermotoga maritima MSB810
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT210
SSP644076 Silicibacter sp. TrichCH4B9
SSON300269 ncbi Shigella sonnei Ss04610
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153059
SPRO399741 ncbi Serratia proteamaculans 56810
SPEA398579 ncbi Shewanella pealeana ATCC 70034510
SMEL266834 ncbi Sinorhizobium meliloti 102110
SMED366394 ncbi Sinorhizobium medicae WSM41910
SHIGELLA ncbi Shigella flexneri 2a str. 2457T9
SHAL458817 ncbi Shewanella halifaxensis HAW-EB410
SHAE279808 ncbi Staphylococcus haemolyticus JCSC143510
SFLE373384 ncbi Shigella flexneri 5 str. 84019
SFLE198214 ncbi Shigella flexneri 2a str. 3019
SERY405948 ncbi Saccharopolyspora erythraea NRRL 233810
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47610
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6710
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1810
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty210
SDYS300267 ncbi Shigella dysenteriae Sd1979
SCO ncbi Streptomyces coelicolor A3(2)10
SBOY300268 ncbi Shigella boydii Sb2279
SAVE227882 ncbi Streptomyces avermitilis MA-468010
SAGA211110 ncbi Streptococcus agalactiae NEM31610
SAGA208435 ncbi Streptococcus agalactiae 2603V/R10
SAGA205921 ncbi Streptococcus agalactiae A90910
RXYL266117 ncbi Rubrobacter xylanophilus DSM 994110
RSP101510 ncbi Rhodococcus jostii RHA110
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384110
RFER338969 ncbi Rhodoferax ferrireducens T1189
REUT264198 ncbi Ralstonia eutropha JMP1349
RETL347834 ncbi Rhizobium etli CFN 4210
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a10
PSP117 Pirellula sp.9
PPRO298386 ncbi Photobacterium profundum SS910
PMUL272843 ncbi Pasteurella multocida multocida Pm7010
PMOB403833 ncbi Petrotoga mobilis SJ959
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO110
PING357804 ncbi Psychromonas ingrahamii 3710
PFLU216595 ncbi Pseudomonas fluorescens SBW259
OIHE221109 ncbi Oceanobacillus iheyensis HTE83110
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918810
MTHE264732 ncbi Moorella thermoacetica ATCC 390739
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E9
MSP400668 ncbi Marinomonas sp. MWYL19
MLOT266835 ncbi Mesorhizobium loti MAFF30309910
LLAC272623 ncbi Lactococcus lactis lactis Il140310
LCAS321967 ncbi Lactobacillus casei ATCC 33410
LACI272621 ncbi Lactobacillus acidophilus NCFM9
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857810
HSOM228400 ncbi Haemophilus somnus 233610
HSOM205914 ncbi Haemophilus somnus 129PT9
HINF71421 ncbi Haemophilus influenzae Rd KW2010
HINF374930 ncbi Haemophilus influenzae PittEE10
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HCHE349521 ncbi Hahella chejuensis KCTC 23969
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-210
GKAU235909 ncbi Geobacillus kaustophilus HTA42610
ESP42895 Enterobacter sp.10
EFER585054 ncbi Escherichia fergusonii ATCC 3546910
ECOO157 ncbi Escherichia coli O157:H7 EDL93310
ECOL83334 Escherichia coli O157:H710
ECOL585397 ncbi Escherichia coli ED1a10
ECOL585057 ncbi Escherichia coli IAI3910
ECOL585056 ncbi Escherichia coli UMN02610
ECOL585055 ncbi Escherichia coli 5598910
ECOL585035 ncbi Escherichia coli S8810
ECOL585034 ncbi Escherichia coli IAI110
ECOL481805 ncbi Escherichia coli ATCC 873910
ECOL469008 ncbi Escherichia coli BL21(DE3)10
ECOL439855 ncbi Escherichia coli SMS-3-510
ECOL413997 ncbi Escherichia coli B str. REL60610
ECOL409438 ncbi Escherichia coli SE1110
ECOL405955 ncbi Escherichia coli APEC O110
ECOL364106 ncbi Escherichia coli UTI8910
ECOL362663 ncbi Escherichia coli 53610
ECOL331111 ncbi Escherichia coli E24377A10
ECOL316407 ncbi Escherichia coli K-12 substr. W311010
ECOL199310 ncbi Escherichia coli CFT07310
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104310
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247210
CTET212717 ncbi Clostridium tetani E8810
CPER195102 ncbi Clostridium perfringens 139
CNOV386415 ncbi Clostridium novyi NT10
CDIF272563 ncbi Clostridium difficile 63010
CBOT515621 ncbi Clostridium botulinum Ba4 str. 65710
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B10
BXEN266265 ncbi Burkholderia xenovorans LB40010
BWEI315730 ncbi Bacillus weihenstephanensis KBAB410
BVIE269482 ncbi Burkholderia vietnamiensis G410
BTHU412694 ncbi Bacillus thuringiensis Al Hakam10
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-2710
BTHA271848 ncbi Burkholderia thailandensis E26410
BSUI470137 ncbi Brucella suis ATCC 2344510
BSUI204722 ncbi Brucella suis 133010
BSUB ncbi Bacillus subtilis subtilis 1689
BSP36773 Burkholderia sp.10
BPUM315750 ncbi Bacillus pumilus SAFR-03210
BPSE320373 ncbi Burkholderia pseudomallei 6689
BPSE320372 ncbi Burkholderia pseudomallei 1710b9
BPSE272560 ncbi Burkholderia pseudomallei K962439
BOVI236 Brucella ovis9
BMEL359391 ncbi Brucella melitensis biovar Abortus 230810
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M10
BLIC279010 ncbi Bacillus licheniformis ATCC 145809
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1109
BHAL272558 ncbi Bacillus halodurans C-12510
BCLA66692 ncbi Bacillus clausii KSM-K1610
BCER572264 ncbi Bacillus cereus 03BB10210
BCER405917 Bacillus cereus W10
BCER315749 ncbi Bacillus cytotoxicus NVH 391-9810
BCER288681 ncbi Bacillus cereus E33L10
BCER226900 ncbi Bacillus cereus ATCC 145799
BCEN331272 ncbi Burkholderia cenocepacia HI242410
BCEN331271 ncbi Burkholderia cenocepacia AU 105410
BCAN483179 ncbi Brucella canis ATCC 2336510
BANT592021 ncbi Bacillus anthracis A024810
BANT568206 ncbi Bacillus anthracis CDC 68410
BANT261594 ncbi Bacillus anthracis Ames Ancestor10
BANT260799 ncbi Bacillus anthracis Sterne10
BAMY326423 ncbi Bacillus amyloliquefaciens FZB4210
BAMB398577 ncbi Burkholderia ambifaria MC40-610
BAMB339670 ncbi Burkholderia ambifaria AMMD10
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94110
AVAR240292 ncbi Anabaena variabilis ATCC 2941310
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4499
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0310
APLE416269 ncbi Actinobacillus pleuropneumoniae L2010
AMET293826 ncbi Alkaliphilus metalliredigens QYMF9
AHYD196024 Aeromonas hydrophila dhakensis10


Names of the homologs of the genes in the group in each of these orgs
  G7340   G6801   G6800   EG12520   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   
YPSE349747 YPSIP31758_4029YPSIP31758_3522YPSIP31758_3521YPSIP31758_0149YPSIP31758_0151YPSIP31758_0813YPSIP31758_4029YPSIP31758_1509YPSIP31758_1507YPSIP31758_2466
YPSE273123 YPTB3806YPTB0551YPTB0552YPTB0129YPTB0130YPTB3230YPTB3806YPTB2535YPTB2537YPTB1523
YPES386656 YPDSF_3327YPDSF_3220YPDSF_3219YPDSF_3518YPDSF_3517YPDSF_0556YPDSF_3327YPDSF_1910YPDSF_1913YPDSF_1469
YPES377628 YPN_3612YPN_0281YPN_0282YPN_0061YPN_0062YPN_3156YPN_3612YPN_2093YPN_2095YPN_2471
YPES360102 YPA_3791YPA_3874YPA_3873YPA_0116YPA_0117YPA_0306YPA_3791YPA_1994YPA_1996YPA_0803
YPES349746 YPANGOLA_A4097YPANGOLA_A0859YPANGOLA_A0858YPANGOLA_A0477YPANGOLA_A0479YPANGOLA_A0157YPANGOLA_A4097YPANGOLA_A1759YPANGOLA_A1761YPANGOLA_A3018
YPES214092 YPO3963YPO0411YPO0412YPO3906YPO3905YPO0958YPO3963YPO2499YPO2501YPO1508
YPES187410 Y3866Y3770Y3769Y0330Y0331Y3345Y3866Y1689Y1687Y2661
YENT393305 YE0010YE0527YE0528YE0143YE0144YE2814YE0010YE0010YE0011YE0009
VVUL216895 VV2_0063VV2_0063VV2_0062VV2_0063VV2_0063VV2_0062VV2_0063VV2_0063VV2_0064VV2_0062
VVUL196600 VVA0570VVA0570VVA0569VVA0570VVA0570VVA0162VVA0570VVA0570VVA0571VVA0569
VPAR223926 VPA1085VPA1085VPA1086VPA1085VPA1085VPA1086VPA1085VPA1085VPA1084VPA1086
VFIS312309 VF1446VF1446VF1445VF1446VF1446VF1445VF1446VF1446VF1447VF1445
VEIS391735 VEIS_3417VEIS_2121VEIS_2120VEIS_2045VEIS_2687VEIS_1088VEIS_2045VEIS_2045VEIS_2682VEIS_1088
VCHO345073 VC0395_0009VC0395_0009VC0395_0010VC0395_0009VC0395_0009VC0395_A0944VC0395_0009VC0395_0009VC0395_0008VC0395_0010
VCHO VCA0129VCA0129VCA0128VCA0129VCA0129VC1327VCA0129VCA0129VCA0130VCA0128
TTEN273068 TTE0205TTE0764TTE0204TTE0205TTE0205TTE0763TTE0764TTE0205TTE0206TTE0204
TSP1755 TETH514_0158TETH514_0165TETH514_0164TETH514_0165TETH514_0165TETH514_0164TETH514_0165TETH514_0165TETH514_0166TETH514_0164
TPSE340099 TETH39_2039TETH39_2039TETH39_2040TETH39_2039TETH39_2039TETH39_2040TETH39_2039TETH39_2039TETH39_2038TETH39_2040
TPET390874 TPET_0812TPET_0812TPET_1792TPET_1793TPET_0809TPET_1793TPET_1793TPET_1794TPET_0809
TMAR243274 TM_0955TM_0112TM_0956TM_0955TM_0955TM_0115TM_0955TM_0955TM_0958TM_0956
STYP99287 STM3883STM4075STM4074STM3883STM3883STM3882STM3883STM3883STM3884STM3882
SSP644076 SCH4B_0703SCH4B_0804SCH4B_0803SCH4B_0703SCH4B_0703SCH4B_0702SCH4B_0703SCH4B_0703SCH4B_0701
SSON300269 SSO_2629SSO_2629SSO_3919SSO_4411SSO_4412SSO_2205SSO_3920SSO_3920SSO_4409SSO_3919
SSAP342451 SSP1393SSP1394SSP1393SSP1393SSP1394SSP1393SSP1393SSP1392SSP1394
SPRO399741 SPRO_4227SPRO_0101SPRO_1029SPRO_4766SPRO_4765SPRO_1029SPRO_4899SPRO_4899SPRO_4898SPRO_4900
SPEA398579 SPEA_0516SPEA_0516SPEA_0515SPEA_2283SPEA_0516SPEA_2284SPEA_0516SPEA_0516SPEA_0517SPEA_0515
SMEL266834 SMB21375SMB21018SMB21019SMB21589SMB21590SMB21376SMC02772SMB20352SMB21345SMC02325
SMED366394 SMED_4767SMED_5242SMED_4316SMED_4910SMED_4911SMED_4768SMED_5745SMED_3767SMED_4740SMED_0226
SHIGELLA YPHDYDEYS1709YTFTRBSCMGLARBSCRBSCMGLA
SHAL458817 SHAL_0580SHAL_0580SHAL_0579SHAL_2011SHAL_0580SHAL_2010SHAL_0580SHAL_0580SHAL_0581SHAL_0579
SHAE279808 SH0178SH0178SH0177SH0178SH0178SH0177SH0178SH0178SH0179SH0177
SFLE373384 SFV_2594SFV_1569SFV_1568SFV_4262SFV_4261SFV_2224SFV_3749SFV_3749SFV_3973
SFLE198214 AAN44091.1AAN43171.1AAN43170.1AAN45679.1AAN45678.1AAN43755.1AAN45272.1AAN45272.1AAN43755.1
SERY405948 SACE_5660SACE_5660SACE_5659SACE_2988SACE_5660SACE_5659SACE_1882SACE_5660SACE_5660SACE_5659
SENT454169 SEHA_C4216SEHA_C4406SEHA_C4405SEHA_C4216SEHA_C4216SEHA_C4215SEHA_C4216SEHA_C4216SEHA_C4217SEHA_C4215
SENT321314 SCH_3796SCH_3964SCH_3795SCH_3796SCH_3796SCH_3795SCH_3796SCH_3796SCH_3797SCH_3795
SENT220341 STY3895STY3795STY3796STY3895STY3895STY3896STY3895STY3895STY3894STY3896
SENT209261 T3636T3543T3544T3636T3636T3637T3636T3636T3635T3637
SDYS300267 SDY_3997SDY_4128SDY_4248SDY_4249SDY_4128SDY_3997SDY_3997SDY_4130SDY_1121
SCO SCO2747SCO0810SCO6567SCO6568SCO2747SCO2405SCO2747SCO2747SCO2747SCO2746
SBOY300268 SBO_2572SBO_2572SBO_4216SBO_4215SBO_2178SBO_3764SBO_3764SBO_4218SBO_3575
SAVE227882 SAV1827SAV7417SAV7416SAV1827SAV968SAV7416SAV5318SAV5318SAV5318SAV7416
SAGA211110 GBS0114GBS0114GBS0115GBS0114GBS0114GBS0115GBS0114GBS0114GBS0113GBS0115
SAGA208435 SAG_0115SAG_0115SAG_0116SAG_0115SAG_0115SAG_0116SAG_0115SAG_0115SAG_0114SAG_0116
SAGA205921 SAK_0167SAK_0167SAK_0168SAK_0167SAK_0167SAK_0168SAK_0167SAK_0167SAK_0166SAK_0168
RXYL266117 RXYL_1889RXYL_1683RXYL_1684RXYL_3002RXYL_3002RXYL_3003RXYL_3002RXYL_0947RXYL_0948RXYL_0946
RSP101510 RHA1_RO00821RHA1_RO04086RHA1_RO04085RHA1_RO00821RHA1_RO00821RHA1_RO04085RHA1_RO00821RHA1_RO00821RHA1_RO00819RHA1_RO04085
RLEG216596 PRL90223PRL120201RL2449RL2378RL2379RL2449RL1746RL1746RL2721RL4654
RFER338969 RFER_0439RFER_0439RFER_0439RFER_0439RFER_3129RFER_0439RFER_3130RFER_1903RFER_3129
REUT264198 REUT_B4134REUT_A1653REUT_A1652REUT_B4134REUT_A1653REUT_A1652REUT_A1652REUT_B4136REUT_A1653
RETL347834 RHE_CH03189RHE_PE00287RHE_PB00077RHE_CH02087RHE_CH02088RHE_PB00077RHE_CH01211RHE_PF00034RHE_CH00612RHE_CH03989
PSYR205918 PSYR_2570PSYR_2570PSYR_3264PSYR_2570PSYR_2570PSYR_3264PSYR_2570PSYR_2570PSYR_2151PSYR_3264
PSP117 RB3497RB3497RB10181RB3497RB3496RB3497RB3497RB3493RB3496
PPRO298386 PBPRB1558PBPRB1558PBPRB1557PBPRB1558PBPRB1558PBPRB1871PBPRB1558PBPRB1558PBPRB1559PBPRB1557
PMUL272843 PM0154PM1275PM1274PM1378PM1378PM1326PM0154PM0154PM0153PM0155
PMOB403833 PMOB_1602PMOB_1602PMOB_0637PMOB_0922PMOB_0922PMOB_1601PMOB_1602PMOB_0922PMOB_0923
PLUM243265 PLU0057PLU3144PLU3143PLU0057PLU0057PLU0056PLU0057PLU0057PLU0058PLU0056
PING357804 PING_0342PING_0342PING_0341PING_2807PING_0342PING_0341PING_0342PING_0342PING_0343PING_0341
PFLU216595 PFLU3994PFLU3119PFLU2585PFLU3726PFLU3119PFLU3994PFLU3994PFLU3996PFLU2584
OIHE221109 OB2573OB2573OB2574OB2573OB2573OB2574OB2573OB2573OB2572OB2574
OANT439375 OANT_0290OANT_3568OANT_3406OANT_1416OANT_1415OANT_0291OANT_4066OANT_4066OANT_0292OANT_3347
MTHE264732 MOTH_0614MOTH_0614MOTH_0614MOTH_0614MOTH_0613MOTH_0614MOTH_0614MOTH_0612MOTH_0613
MSUC221988 MS0199MS0199MS0199MS1610MS0642MS0199MS0199MS1612MS0062
MSP400668 MMWYL1_1867MMWYL1_1987MMWYL1_1859MMWYL1_3533MMWYL1_3532MMWYL1_1986MMWYL1_3108MMWYL1_1987MMWYL1_3110
MLOT266835 MLL1013MLL5704MLR4967MLL7665MLL7665MLL5705MLL2145MLL7011MLL1012MLL3598
LLAC272623 L83296L83296L84240L83296L83296L84240L83296L83296L82310L84240
LCAS321967 LSEI_0309LSEI_0309LSEI_0308LSEI_0309LSEI_0309LSEI_0308LSEI_0309LSEI_0309LSEI_0310LSEI_0308
LACI272621 LBA1482LBA1483LBA1482LBA1482LBA1483LBA1482LBA1482LBA1481LBA1483
KPNE272620 GKPORF_B3497GKPORF_B2850GKPORF_B2851GKPORF_B3986GKPORF_B3987GKPORF_B4919GKPORF_B3497GKPORF_B3497GKPORF_B3498GKPORF_B3496
HSOM228400 HSM_0091HSM_1945HSM_1944HSM_0822HSM_0432HSM_0557HSM_0558HSM_0091HSM_0092HSM_0090
HSOM205914 HS_0584HS_0052HS_0051HS_1579HS_1579HS_0768HS_0584HS_0769HS_0767
HINF71421 HI_0503HI_1109HI_0502HI_0503HI_0503HI_0823HI_0503HI_0503HI_0504HI_0502
HINF374930 CGSHIEE_06515CGSHIEE_08210CGSHIEE_00480CGSHIEE_00475CGSHIEE_00475CGSHIEE_07945CGSHIEE_00475CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480
HINF281310 NTHI0631NTHI0630NTHI0631NTHI0631NTHI0630NTHI0631NTHI0631NTHI0632NTHI0630
HCHE349521 HCH_02470HCH_01167HCH_02470HCH_02470HCH_01167HCH_02470HCH_02470HCH_02467HCH_01167
GTHE420246 GTNG_3171GTNG_1814GTNG_3172GTNG_3171GTNG_1814GTNG_3172GTNG_3171GTNG_3171GTNG_3170GTNG_3172
GKAU235909 GK3227GK3227GK3228GK1893GK3227GK3228GK3227GK3227GK3226GK3228
ESP42895 ENT638_4114ENT638_3535ENT638_3536ENT638_0414ENT638_0415ENT638_0289ENT638_0288ENT638_4114ENT638_4113ENT638_4115
EFER585054 EFER_4049EFER_1563EFER_1564EFER_4308EFER_4309EFER_4283EFER_4284EFER_4049EFER_4050EFER_4048
ECOO157 YPHDYDEYZ2192YTFTYJFFMGLAZ5690RBSCRBSBRBSA
ECOL83334 ECS3412ECS2121ECS2120ECS5207ECS5208ECS3041ECS5072ECS4692ECS4693ECS4691
ECOL585397 ECED1_2973ECED1_2973ECED1_4439ECED1_5086ECED1_5086ECED1_4821ECED1_4820ECED1_4440ECED1_4441ECED1_4439
ECOL585057 ECIAI39_2749ECIAI39_2749ECIAI39_4354ECIAI39_4700ECIAI39_2749ECIAI39_4511ECIAI39_4510ECIAI39_4355ECIAI39_4356ECIAI39_4354
ECOL585056 ECUMN_2866ECUMN_1782ECUMN_1781ECUMN_4763ECUMN_4764ECUMN_2482ECUMN_4280ECUMN_4280ECUMN_4281ECUMN_4279
ECOL585055 EC55989_2832EC55989_1647EC55989_1646EC55989_4788EC55989_4789EC55989_2399EC55989_4225EC55989_4225EC55989_4226EC55989_4224
ECOL585035 ECS88_2716ECS88_2716ECS88_4171ECS88_4820ECS88_4821ECS88_4588ECS88_4172ECS88_4172ECS88_4173ECS88_4171
ECOL585034 ECIAI1_2599ECIAI1_1526ECIAI1_1525ECIAI1_4462ECIAI1_4463ECIAI1_2226ECIAI1_3934ECIAI1_3934ECIAI1_3935ECIAI1_3933
ECOL481805 ECOLC_1131ECOLC_2144ECOLC_2145ECOLC_3781ECOLC_3780ECOLC_3939ECOLC_3940ECOLC_4244ECOLC_4243ECOLC_4245
ECOL469008 ECBD_1138ECBD_0922ECBD_4281ECBD_3804ECBD_3803ECBD_3943ECBD_3944ECBD_4280ECBD_4279ECBD_4281
ECOL439855 ECSMS35_2699ECSMS35_1658ECSMS35_1659ECSMS35_4707ECSMS35_4708ECSMS35_4553ECSMS35_4552ECSMS35_4118ECSMS35_4119ECSMS35_4117
ECOL413997 ECB_02438ECB_02651ECB_03635ECB_04098ECB_04099ECB_03959ECB_03958ECB_03636ECB_03637ECB_03635
ECOL409438 ECSE_2833ECSE_1604ECSE_1603ECSE_4535ECSE_4536ECSE_4385ECSE_4384ECSE_4040ECSE_4041ECSE_4039
ECOL405955 APECO1_3985APECO1_3985APECO1_2714APECO1_2162APECO1_2161APECO1_2363APECO1_2364APECO1_2713APECO1_2712APECO1_2714
ECOL364106 UTI89_C2865UTI89_C2865UTI89_C4304UTI89_C4834UTI89_C4835UTI89_C4682UTI89_C4305UTI89_C4305UTI89_C4306UTI89_C4304
ECOL362663 ECP_2547ECP_2547ECP_3948ECP_4479ECP_4480ECP_4330ECP_3344ECP_3671ECP_3951ECP_3948
ECOL331111 ECE24377A_2831ECE24377A_2831ECE24377A_1714ECE24377A_4799ECE24377A_4800ECE24377A_2444ECE24377A_4266ECE24377A_4266ECE24377A_4267ECE24377A_4265
ECOL316407 ECK2543:JW2530:B2546ECK1507:JW1507:B1514ECK1506:JW1506:B1513ECK4225:JW5753:B4230ECK4226:JW5754:B4231ECK4080:JW4048:B4087ECK4079:JW4047:B4086ECK3744:JW3729:B3750ECK3745:JW3730:B3751ECK3743:JW3728:B3749
ECOL199310 C3068C3068C4677C5327C5328C5093C5092C4678C4679C4677
ECAR218491 ECA0012ECA0100ECA0011ECA4234ECA4233ECA0011ECA1461ECA0012ECA0013ECA0011
CVIO243365 CV_3017CV_3017CV_3018CV_3017CV_3017CV_3018CV_3017CV_3017CV_3016CV_3018
CTET212717 CTC_00906CTC_02349CTC_02350CTC_02349CTC_02349CTC_00905CTC_02349CTC_02349CTC_02347CTC_02350
CPER195102 CPE1629CPE1630CPE1629CPE1629CPE1630CPE1629CPE1629CPE1628CPE1630
CNOV386415 NT01CX_0163NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0162NT01CX_0164
CDIF272563 CD1588CD1588CD0301CD0302CD0302CD0301CD1588CD0302CD0300CD0301
CBOT515621 CLJ_B1313CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1315CLJ_B1312
CBOT508765 CLL_A1530CLL_A1530CLL_A1529CLL_A1530CLL_A1530CLL_A1529CLL_A1530CLL_A1530CLL_A1531CLL_A1529
BXEN266265 BXE_B1397BXE_B1036BXE_C1350BXE_B1397BXE_B1397BXE_C1350BXE_B1397BXE_C1349BXE_B0894BXE_C1350
BWEI315730 BCERKBAB4_0582BCERKBAB4_2771BCERKBAB4_2772BCERKBAB4_0582BCERKBAB4_0582BCERKBAB4_0581BCERKBAB4_0582BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581
BVIE269482 BCEP1808_3838BCEP1808_3381BCEP1808_1389BCEP1808_6550BCEP1808_6549BCEP1808_1389BCEP1808_1507BCEP1808_3381BCEP1808_1558BCEP1808_1389
BTHU412694 BALH_0611BALH_2663BALH_2664BALH_0611BALH_0611BALH_0609BALH_0611BALH_0611BALH_0612BALH_0609
BTHU281309 BT9727_0579BT9727_2715BT9727_2716BT9727_0579BT9727_0579BT9727_0578BT9727_0579BT9727_0579BT9727_0580BT9727_0578
BTHA271848 BTH_I2433BTH_I2433BTH_II0211BTH_I2344BTH_I2345BTH_I2434BTH_I2433BTH_I2433BTH_I2435BTH_II0211
BSUI470137 BSUIS_A1690BSUIS_B0851BSUIS_A0571BSUIS_A1690BSUIS_A1690BSUIS_B0929BSUIS_A1690BSUIS_A1690BSUIS_B0850BSUIS_A1691
BSUI204722 BR_1631BR_A0859BR_0542BR_1631BR_1631BR_A0936BR_1631BR_1631BR_A0858BR_1632
BSUB BSU35950BSU35940BSU35950BSU35950BSU35940BSU35950BSU35950BSU35960BSU35940
BSP36773 BCEP18194_B0047BCEP18194_B0886BCEP18194_A4569BCEP18194_A4682BCEP18194_A4682BCEP18194_B0624BCEP18194_B0886BCEP18194_B0886BCEP18194_B0884BCEP18194_A4569
BPUM315750 BPUM_3267BPUM_3267BPUM_3266BPUM_3267BPUM_3267BPUM_3266BPUM_3267BPUM_3267BPUM_3268BPUM_3266
BPSE320373 BURPS668_1909BURPS668_A0286BURPS668_A0456BURPS668_A0456BURPS668_A0286BURPS668_1909BURPS668_1909BURPS668_1907BURPS668_A0286
BPSE320372 BURPS1710B_A2230BURPS1710B_B1956BURPS1710B_B1955BURPS1710B_B2111BURPS1710B_B1956BURPS1710B_A2230BURPS1710B_A2230BURPS1710B_A2228BURPS1710B_B1956
BPSE272560 BPSL1791BPSS0142BPSS0141BPSS0256BPSS0142BPSL1791BPSL1791BPSL1793BPSS0142
BOVI236 GBOORF1646GBOORF1646GBOORF0569GBOORF1646GBOORF1646GBOORFA0965GBOORF1646GBOORF1646GBOORF1647
BMEL359391 BAB1_1649BAB2_0376BAB1_0565BAB1_1649BAB1_1649BAB2_0299BAB1_1649BAB1_1649BAB2_0377BAB2_1110
BMEL224914 BMEI0392BMEII0433BMEI1392BMEI0392BMEI0392BMEII0361BMEI0392BMEI0392BMEII0435BMEII0145
BLIC279010 BL02442BL02441BL02442BL01748BL02441BL02442BL02442BL02443BL02441
BJAP224911 BLR1122BLL2676BLL5784BLR3202BLR3203BLR2270BLL2676BLR1122BLR3200
BHAL272558 BH3731BH3731BH3730BH2321BH3731BH3730BH3731BH3731BH3732BH3730
BCLA66692 ABC3545ABC3545ABC3546ABC3545ABC0411ABC3546ABC3545ABC3545ABC3544ABC3546
BCER572264 BCA_0706BCA_3047BCA_3049BCA_0706BCA_0706BCA_0705BCA_0706BCA_0706BCA_0707BCA_0705
BCER405917 BCE_0736BCE_3014BCE_3015BCE_0736BCE_0736BCE_0735BCE_0736BCE_0736BCE_0737BCE_0735
BCER315749 BCER98_0563BCER98_0563BCER98_0562BCER98_0563BCER98_0563BCER98_0562BCER98_0563BCER98_0563BCER98_0564BCER98_0562
BCER288681 BCE33L0578BCE33L2695BCE33L2696BCE33L0578BCE33L0578BCE33L0577BCE33L0578BCE33L0578BCE33L0579BCE33L0577
BCER226900 BC_0663BC_2962BC_0662BC_0663BC_0663BC_0662BC_0663BC_0663BC_0662
BCEN331272 BCEN2424_5639BCEN2424_4818BCEN2424_1425BCEN2424_5990BCEN2424_5989BCEN2424_5039BCEN2424_4818BCEN2424_4818BCEN2424_4820BCEN2424_1425
BCEN331271 BCEN_5220BCEN_3549BCEN_0943BCEN_5625BCEN_5624BCEN_3328BCEN_3549BCEN_3549BCEN_3547BCEN_0943
BCAN483179 BCAN_A1668BCAN_B0876BCAN_A0554BCAN_A1668BCAN_A1668BCAN_B0956BCAN_A1668BCAN_A1668BCAN_B0875BCAN_A1669
BANT592021 BAA_0752BAA_3029BAA_3031BAA_0752BAA_0752BAA_0751BAA_0752BAA_0752BAA_0753BAA_0751
BANT568206 BAMEG_3918BAMEG_1628BAMEG_1626BAMEG_3918BAMEG_3918BAMEG_3919BAMEG_3918BAMEG_3918BAMEG_3917BAMEG_3919
BANT261594 GBAA0668GBAA2977GBAA2978GBAA0668GBAA0668GBAA0667GBAA0668GBAA0668GBAA0669GBAA0667
BANT260799 BAS0635BAS2765BAS2766BAS0635BAS0635BAS0634BAS0635BAS0635BAS0636BAS0634
BAMY326423 RBAM_033120RBAM_033120RBAM_033110RBAM_033120RBAM_033120RBAM_033110RBAM_033120RBAM_033120RBAM_033130RBAM_033110
BAMB398577 BAMMC406_1253BAMMC406_1213BAMMC406_1212BAMMC406_5926BAMMC406_5927BAMMC406_4967BAMMC406_4722BAMMC406_4722BAMMC406_4724BAMMC406_1344
BAMB339670 BAMB_6336BAMB_4199BAMB_1305BAMB_6195BAMB_6196BAMB_4447BAMB_4199BAMB_4199BAMB_4201BAMB_4447
BABO262698 BRUAB1_1619BRUAB2_0372BRUAB1_0564BRUAB1_1619BRUAB1_1619BRUAB2_0297BRUAB1_1619BRUAB1_1619BRUAB2_0373BRUAB2_1088
AVAR240292 AVA_2173AVA_2173AVA_2172AVA_2173AVA_2173AVA_2172AVA_2173AVA_2173AVA_2171AVA_2172
ASAL382245 ASA_1969ASA_1969ASA_2138ASA_2137ASA_0215ASA_1969ASA_1969ASA_1968ASA_2395
APLE434271 APJL_1702APJL_1958APJL_1701APJL_1702APJL_1702APJL_1451APJL_1702APJL_1702APJL_1703APJL_1701
APLE416269 APL_1671APL_1911APL_1670APL_1671APL_1671APL_1419APL_1671APL_1671APL_1672APL_1670
AMET293826 AMET_0458AMET_0588AMET_2813AMET_0458AMET_3797AMET_0587AMET_0588AMET_0588AMET_2813
AHYD196024 AHA_2311AHA_1905AHA_2310AHA_2311AHA_2311AHA_2310AHA_2311AHA_2311AHA_2312AHA_2310


Organism features enriched in list (features available for 141 out of the 150 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000822240112
Disease:Anthrax 0.003311744
Disease:Brucellosis 0.000783655
Disease:Bubonic_plague 0.000184466
Disease:Dysentery 0.000184466
Disease:Gastroenteritis 0.00007001013
Endospores:No 0.000039632211
Endospores:Yes 3.689e-72953
GC_Content_Range4:0-40 0.000281935213
GC_Content_Range4:40-60 7.236e-881224
GC_Content_Range4:60-100 0.006750925145
GC_Content_Range7:30-40 0.004678929166
GC_Content_Range7:50-60 2.767e-645107
GC_Content_Range7:60-70 0.002607121134
Genome_Size_Range5:0-2 1.192e-146155
Genome_Size_Range5:2-4 0.000820433197
Genome_Size_Range5:4-6 1.112e-1076184
Genome_Size_Range5:6-10 1.248e-62647
Genome_Size_Range9:1-2 6.981e-116128
Genome_Size_Range9:2-3 0.004946219120
Genome_Size_Range9:4-5 0.00004163996
Genome_Size_Range9:5-6 0.00002783788
Genome_Size_Range9:6-8 0.00023151938
Genome_Size_Range9:8-10 0.000914079
Gram_Stain:Gram_Neg 0.003958693333
Habitat:Aquatic 0.00245821291
Habitat:Multiple 0.003807055178
Habitat:Specialized 0.0083395653
Habitat:Terrestrial 0.00012201731
Motility:No 1.050e-616151
Motility:Yes 0.000014086267
Oxygen_Req:Aerobic 0.004029333185
Oxygen_Req:Anaerobic 0.002073314102
Oxygen_Req:Facultative 2.928e-1385201
Pathogenic_in:Animal 0.00685782466
Pathogenic_in:Human 9.118e-673213
Pathogenic_in:No 0.000145337226
Shape:Coccus 0.0007754982
Shape:Rod 3.846e-11116347
Temp._range:Mesophilic 0.0053837124473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 409
Effective number of orgs (counting one per cluster within 468 clusters): 319

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis0
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-11
PPUT351746 ncbi Pseudomonas putida F11
PPUT160488 ncbi Pseudomonas putida KT24401
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PENT384676 ncbi Pseudomonas entomophila L481
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO11
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA141
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H1
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7340   G6801   G6800   EG12520   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245 XAUT_2414
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0418
TWHI203267 TW329
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TPEN368408
TPAL243276
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275 TDE_2216
TCRU317025
TACI273075
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSED425104
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SONE211586
SMUT210007
SMAR399550
SLOI323850
SLAC55218
SGOR29390
SFUM335543
SEPI176280
SEPI176279
SELO269084
SDEN318161
SBAL402882
SBAL399599
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SACI56780
SACI330779
RTYP257363
RSPH349102 RSPH17025_2683
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_0867
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811
PSP312153
PRUM264731
PPUT76869 PPUTGB1_3492
PPUT351746 PPUT_3236
PPUT160488 PP_2454
PPEN278197
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PENT384676 PSEEN1952
PDIS435591
PCRY335284
PCAR338963
PATL342610
PAST100379
PARS340102
PARC259536
PAER208964 PA1946
PAER208963 PA14_39350
PAER178306
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP146
MHYO262722 MHP7448_0233
MHYO262719 MHJ_0226
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LMES203120
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
JSP375286
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMAR272569
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GOXY290633 GOX2221
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_7032
FSP106370
FRANT
FPHI484022
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC31964 CMS0136
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CACE272562 CAC1351
CABO218497
BTUR314724
BTRI382640
BTHE226186
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
APHA212042
APER272557
AORE350688
ANAE240017
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACEL351607 ACEL_1049
ABUT367737
ABOR393595
ABAU360910
AAEO224324


Organism features enriched in list (features available for 384 out of the 409 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000236958112
Disease:Gastroenteritis 0.0015831313
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00963231111
Disease:Wide_range_of_infections 0.00963231111
Endospores:No 0.0000856159211
Endospores:Yes 5.128e-71853
GC_Content_Range4:0-40 7.022e-9171213
GC_Content_Range4:40-60 0.0001616128224
GC_Content_Range4:60-100 0.005582984145
GC_Content_Range7:30-40 4.802e-7134166
GC_Content_Range7:50-60 8.489e-651107
Genome_Size_Range5:0-2 5.045e-25149155
Genome_Size_Range5:2-4 0.0022462144197
Genome_Size_Range5:4-6 1.859e-1677184
Genome_Size_Range5:6-10 1.238e-71447
Genome_Size_Range9:0-1 9.183e-62727
Genome_Size_Range9:1-2 8.472e-19122128
Genome_Size_Range9:2-3 0.000789693120
Genome_Size_Range9:4-5 6.333e-74296
Genome_Size_Range9:5-6 3.418e-83588
Genome_Size_Range9:6-8 6.879e-61238
Genome_Size_Range9:8-10 0.008042629
Gram_Stain:Gram_Neg 0.0028463205333
Habitat:Aquatic 0.00120407291
Habitat:Host-associated 0.0023189150206
Habitat:Multiple 0.000109998178
Habitat:Specialized 0.00527424353
Habitat:Terrestrial 0.0000155931
Motility:No 0.0010894114151
Motility:Yes 0.0000232153267
Optimal_temp.:30-37 0.00462161718
Oxygen_Req:Anaerobic 0.003901078102
Oxygen_Req:Facultative 2.902e-7105201
Shape:Coccus 0.00086156682
Shape:Irregular_coccus 0.00073031717
Shape:Rod 1.126e-15185347
Shape:Sphere 0.00316881819
Shape:Spiral 0.00007243234
Temp._range:Mesophilic 0.0029829300473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 39
Effective number of orgs (counting one per cluster within 468 clusters): 31

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TMAR243274 ncbi Thermotoga maritima MSB8 0.000015984110
SAGA211110 ncbi Streptococcus agalactiae NEM316 0.000021386610
SAGA208435 ncbi Streptococcus agalactiae 2603V/R 0.000022186910
SAGA205921 ncbi Streptococcus agalactiae A909 0.000022387010
LLAC272623 ncbi Lactococcus lactis lactis Il1403 0.000034390810
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.000054695110
CTET212717 ncbi Clostridium tetani E88 0.0000923100210
LACI272621 ncbi Lactobacillus acidophilus NCFM 0.00011606849
CNOV386415 ncbi Clostridium novyi NT 0.0002131108910
SHAE279808 ncbi Staphylococcus haemolyticus JCSC1435 0.0002401110210
BXEN266265 ncbi Burkholderia xenovorans LB400 0.0003144113210
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00047268019
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 33223 0.0005600119910
TPET390874 ncbi Thermotoga petrophila RKU-1 0.00067628349
TSP1755 Thermoanaerobacter sp. 0.0008304124710
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B 0.0008371124810
AVAR240292 ncbi Anabaena variabilis ATCC 29413 0.0011669129010
RXYL266117 ncbi Rubrobacter xylanophilus DSM 9941 0.0012320129710
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB4 0.0012904130310
CDIF272563 ncbi Clostridium difficile 630 0.0013722131110
CBOT515621 ncbi Clostridium botulinum Ba4 str. 657 0.0016338133410
SCO ncbi Streptomyces coelicolor A3(2) 0.0036429144510
SERY405948 ncbi Saccharopolyspora erythraea NRRL 2338 0.0038503145310
SAVE227882 ncbi Streptomyces avermitilis MA-4680 0.0044767147510
RSP101510 ncbi Rhodococcus jostii RHA1 0.0046945148210
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0052634149910
HINF374930 ncbi Haemophilus influenzae PittEE 0.0053343150110
PSP117 Pirellula sp. 0.005674010619
BMEL359391 ncbi Brucella melitensis biovar Abortus 2308 0.0060516152010
BABO262698 ncbi Brucella abortus bv. 1 str. 9-941 0.0060916152110
BSUI470137 ncbi Brucella suis ATCC 23445 0.0072204154710
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 15305 0.008241111079
HSOM228400 ncbi Haemophilus somnus 2336 0.0082659156810
BCAN483179 ncbi Brucella canis ATCC 23365 0.0083722157010
BSUI204722 ncbi Brucella suis 1330 0.0086987157610
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M 0.0087542157710
BCER315749 ncbi Bacillus cytotoxicus NVH 391-98 0.0090940158310
BHAL272558 ncbi Bacillus halodurans C-125 0.0095055159010
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0099961159810


Names of the homologs of the genes in the group in each of these orgs
  G7340   G6801   G6800   EG12520   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   
TMAR243274 TM_0955TM_0112TM_0956TM_0955TM_0955TM_0115TM_0955TM_0955TM_0958TM_0956
SAGA211110 GBS0114GBS0114GBS0115GBS0114GBS0114GBS0115GBS0114GBS0114GBS0113GBS0115
SAGA208435 SAG_0115SAG_0115SAG_0116SAG_0115SAG_0115SAG_0116SAG_0115SAG_0115SAG_0114SAG_0116
SAGA205921 SAK_0167SAK_0167SAK_0168SAK_0167SAK_0167SAK_0168SAK_0167SAK_0167SAK_0166SAK_0168
LLAC272623 L83296L83296L84240L83296L83296L84240L83296L83296L82310L84240
LCAS321967 LSEI_0309LSEI_0309LSEI_0308LSEI_0309LSEI_0309LSEI_0308LSEI_0309LSEI_0309LSEI_0310LSEI_0308
CTET212717 CTC_00906CTC_02349CTC_02350CTC_02349CTC_02349CTC_00905CTC_02349CTC_02349CTC_02347CTC_02350
LACI272621 LBA1482LBA1483LBA1482LBA1482LBA1483LBA1482LBA1482LBA1481LBA1483
CNOV386415 NT01CX_0163NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0164NT01CX_0163NT01CX_0163NT01CX_0162NT01CX_0164
SHAE279808 SH0178SH0178SH0177SH0178SH0178SH0177SH0178SH0178SH0179SH0177
BXEN266265 BXE_B1397BXE_B1036BXE_C1350BXE_B1397BXE_B1397BXE_C1350BXE_B1397BXE_C1349BXE_B0894BXE_C1350
PMOB403833 PMOB_1602PMOB_1602PMOB_0637PMOB_0922PMOB_0922PMOB_1601PMOB_1602PMOB_0922PMOB_0923
TPSE340099 TETH39_2039TETH39_2039TETH39_2040TETH39_2039TETH39_2039TETH39_2040TETH39_2039TETH39_2039TETH39_2038TETH39_2040
TPET390874 TPET_0812TPET_0812TPET_1792TPET_1793TPET_0809TPET_1793TPET_1793TPET_1794TPET_0809
TSP1755 TETH514_0158TETH514_0165TETH514_0164TETH514_0165TETH514_0165TETH514_0164TETH514_0165TETH514_0165TETH514_0166TETH514_0164
CBOT508765 CLL_A1530CLL_A1530CLL_A1529CLL_A1530CLL_A1530CLL_A1529CLL_A1530CLL_A1530CLL_A1531CLL_A1529
AVAR240292 AVA_2173AVA_2173AVA_2172AVA_2173AVA_2173AVA_2172AVA_2173AVA_2173AVA_2171AVA_2172
RXYL266117 RXYL_1889RXYL_1683RXYL_1684RXYL_3002RXYL_3002RXYL_3003RXYL_3002RXYL_0947RXYL_0948RXYL_0946
TTEN273068 TTE0205TTE0764TTE0204TTE0205TTE0205TTE0763TTE0764TTE0205TTE0206TTE0204
CDIF272563 CD1588CD1588CD0301CD0302CD0302CD0301CD1588CD0302CD0300CD0301
CBOT515621 CLJ_B1313CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1312CLJ_B1313CLJ_B1313CLJ_B1315CLJ_B1312
SCO SCO2747SCO0810SCO6567SCO6568SCO2747SCO2405SCO2747SCO2747SCO2747SCO2746
SERY405948 SACE_5660SACE_5660SACE_5659SACE_2988SACE_5660SACE_5659SACE_1882SACE_5660SACE_5660SACE_5659
SAVE227882 SAV1827SAV7417SAV7416SAV1827SAV968SAV7416SAV5318SAV5318SAV5318SAV7416
RSP101510 RHA1_RO00821RHA1_RO04086RHA1_RO04085RHA1_RO00821RHA1_RO00821RHA1_RO04085RHA1_RO00821RHA1_RO00821RHA1_RO00819RHA1_RO04085
OIHE221109 OB2573OB2573OB2574OB2573OB2573OB2574OB2573OB2573OB2572OB2574
HINF374930 CGSHIEE_06515CGSHIEE_08210CGSHIEE_00480CGSHIEE_00475CGSHIEE_00475CGSHIEE_07945CGSHIEE_00475CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480
PSP117 RB3497RB3497RB10181RB3497RB3496RB3497RB3497RB3493RB3496
BMEL359391 BAB1_1649BAB2_0376BAB1_0565BAB1_1649BAB1_1649BAB2_0299BAB1_1649BAB1_1649BAB2_0377BAB2_1110
BABO262698 BRUAB1_1619BRUAB2_0372BRUAB1_0564BRUAB1_1619BRUAB1_1619BRUAB2_0297BRUAB1_1619BRUAB1_1619BRUAB2_0373BRUAB2_1088
BSUI470137 BSUIS_A1690BSUIS_B0851BSUIS_A0571BSUIS_A1690BSUIS_A1690BSUIS_B0929BSUIS_A1690BSUIS_A1690BSUIS_B0850BSUIS_A1691
SSAP342451 SSP1393SSP1394SSP1393SSP1393SSP1394SSP1393SSP1393SSP1392SSP1394
HSOM228400 HSM_0091HSM_1945HSM_1944HSM_0822HSM_0432HSM_0557HSM_0558HSM_0091HSM_0092HSM_0090
BCAN483179 BCAN_A1668BCAN_B0876BCAN_A0554BCAN_A1668BCAN_A1668BCAN_B0956BCAN_A1668BCAN_A1668BCAN_B0875BCAN_A1669
BSUI204722 BR_1631BR_A0859BR_0542BR_1631BR_1631BR_A0936BR_1631BR_1631BR_A0858BR_1632
BMEL224914 BMEI0392BMEII0433BMEI1392BMEI0392BMEI0392BMEII0361BMEI0392BMEI0392BMEII0435BMEII0145
BCER315749 BCER98_0563BCER98_0563BCER98_0562BCER98_0563BCER98_0563BCER98_0562BCER98_0563BCER98_0563BCER98_0564BCER98_0562
BHAL272558 BH3731BH3731BH3730BH2321BH3731BH3730BH3731BH3731BH3732BH3730
BPUM315750 BPUM_3267BPUM_3267BPUM_3266BPUM_3267BPUM_3267BPUM_3266BPUM_3267BPUM_3267BPUM_3268BPUM_3266


Organism features enriched in list (features available for 37 out of the 39 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00046911492
Arrangment:Filaments 0.0020440410
Arrangment:Groups 0.003925722
Disease:Brucellosis 7.901e-755
Disease:and_meningitis 0.003925722
Disease:fever 0.003925722
Disease:septicemia 0.000890534
Endospores:Yes 0.00002561253
GC_Content_Range7:60-70 0.00308522134
GC_Content_Range7:70-100 0.0030270411
Genome_Size_Range5:2-4 0.000183623197
Genome_Size_Range5:4-6 0.00191904184
Genome_Size_Range9:8-10 0.000079259
Gram_Stain:Gram_Neg 0.002971013333
Gram_Stain:Gram_Pos 5.756e-622150
Shape:Branched_filament 0.000890534



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTITOLCAT-PWY (galactitol degradation)73630.5302
PWY-6196 (serine racemization)102760.5219
PWY-6374 (vibriobactin biosynthesis)77620.4958
GLUTAMINDEG-PWY (glutamine degradation I)1911050.4805
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121780.4637
XYLCAT-PWY (xylose degradation I)2171110.4630
RIBOKIN-PWY (ribose degradation)2791280.4592
GLUTDEG-PWY (glutamate degradation II)1941020.4483
GLUCUROCAT-PWY (β-D-glucuronide and D-glucuronate degradation)2081060.4452
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50420.4140
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3561390.4042



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6801   G6800   EG12520   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   
G73400.9993880.9993030.9995550.9995620.9994260.9996810.9996660.999590.999527
G68010.9996050.9993440.9993360.9993750.9995670.9995150.9994630.999373
G68000.9994190.9993810.9995940.999530.9995430.9994380.999661
EG125200.9998260.9994480.9996960.9996560.9996340.999529
EG124390.9993540.9996320.9996270.9996250.999478
EG119590.999590.9995530.9994360.999674
EG119580.9997910.9996860.999637
EG108160.9997490.999711
EG108150.999566
EG10814



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PAIRWISE BLAST SCORES:

  G7340   G6801   G6800   EG12520   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   
G73400.0f0---1.3e-27--1.9e-33--
G68014.7e-210.0f0--------
G6800--0.0f0--3.3e-75---3.2e-77
EG125201.2e-22--0.0f0---4.3e-27--
EG124394.6e-30---0.0f0--1.7e-30--
EG11959-----0.0f0---4.0e-95
EG11958------0.0f06.9e-43--
EG10816-------0.0f0--
EG10815--------0.0f0-
EG10814---------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-58-CPLX (LsrA/LsrC/LsrD/LsrB ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.200, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9993 G6800 (lsrA) YDEX-MONOMER (LsrA)
   *in cand* 0.9995 0.9993 G6801 (lsrC) YDEY-MONOMER (LsrC)
             0.9992 0.9990 G6802 (lsrD) YDEZ-MONOMER (LsrD)
             0.9939 0.9848 G6803 (lsrB) YNEA-MONOMER (LsrB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9997 0.9995 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9996 0.9993 EG12439 (yjfF) YJFF-MONOMER (YjfF)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9996 0.9993 G7340 (yphD) YPHD-MONOMER (YphD)

- ABC-42-CPLX (D-allose ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.200, average score: 0.993)
  Genes in pathway or complex:
             0.7632 0.1743 EG12458 (alsB) YJCX-MONOMER (AlsB)
   *in cand* 0.9997 0.9995 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9996 0.9993 EG12439 (yjfF) YJFF-MONOMER (YjfF)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9995 0.9993 G6800 (lsrA) YDEX-MONOMER (LsrA)
   *in cand* 0.9995 0.9993 G6801 (lsrC) YDEY-MONOMER (LsrC)
   *in cand* 0.9996 0.9993 G7340 (yphD) YPHD-MONOMER (YphD)

- ABC-28-CPLX (ribose ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.300, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9995 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9996 0.9993 EG12439 (yjfF) YJFF-MONOMER (YjfF)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)
   *in cand* 0.9995 0.9993 G6800 (lsrA) YDEX-MONOMER (LsrA)
   *in cand* 0.9995 0.9993 G6801 (lsrC) YDEY-MONOMER (LsrC)
   *in cand* 0.9996 0.9993 G7340 (yphD) YPHD-MONOMER (YphD)

- ABC-46-CPLX (galactose ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.200, average score: 1.000)
  Genes in pathway or complex:
             0.9996 0.9992 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9996 0.9993 EG12520 (ytfT) YTFT-MONOMER (YtfT)
             0.9996 0.9992 EG12518 (ytfR) YTFR-MONOMER (YtfR)
   *in cand* 0.9996 0.9993 EG12439 (yjfF) YJFF-MONOMER (YjfF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9994 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9997 0.9995 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9997 0.9995 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9995 0.9994 EG11959 (alsA) YJCW-MONOMER (AlsA)
   *in cand* 0.9995 0.9993 G6800 (lsrA) YDEX-MONOMER (LsrA)
   *in cand* 0.9995 0.9993 G6801 (lsrC) YDEY-MONOMER (LsrC)
   *in cand* 0.9996 0.9993 G7340 (yphD) YPHD-MONOMER (YphD)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10814 EG10815 EG10816 (centered at EG10816)
EG12439 EG12520 (centered at EG12439)
G6800 G6801 (centered at G6801)
G7340 (centered at G7340)
EG11958 EG11959 (centered at EG11959)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7340   G6801   G6800   EG12520   EG12439   EG11959   EG11958   EG10816   EG10815   EG10814   
163/623188/623187/623192/623191/623183/623194/623177/623193/623176/623
AAUR290340:2:Tyes-150115050181-0517515-
AAVE397945:0:Tyes-1911191010---1909-
ABAC204669:0:Tyes--1---0--1
ACAU438753:0:Tyes-201-01-3-
ACEL351607:0:Tyes0---------
ACRY349163:8:Tyes-560-17351734-0560559-
AHYD196024:0:Tyes3990398399399398399399400398
AMET293826:0:Tyes0129230603267128129129-2306
APLE416269:0:Tyes2725192712722720272272273271
APLE434271:0:Tno2725362712722720272272273271
ASAL382245:5:Tyes16991699-1861186001699169916982110
ASP1667:3:Tyes11011-11--
AVAR240292:3:Tyes2212212201
BABO262698:0:Tno-74---0--75744
BABO262698:1:Tno1018-010181018-10181018--
BAMB339670:1:Tno141--01-----
BAMB339670:2:Tno-0---246002246
BAMB339670:3:Tno--0-------
BAMB398577:1:Tno---01-----
BAMB398577:2:Tno-----238002-
BAMB398577:3:Tno4310------131
BAMY326423:0:Tyes1101101120
BANT260799:0:Tno1213521361101120
BANT261594:2:Tno1211221131101120
BANT568206:2:Tyes2243102243224322442243224322422244
BANT592021:2:Tno1223222331101120
BCAN483179:0:Tno-1---77--0-
BCAN483179:1:Tno1078-010781078-10781078-1079
BCEN331271:0:Tno---10-----
BCEN331271:1:Tno1876221---0221221219-
BCEN331271:2:Tno--0------0
BCEN331272:1:Tyes---10-----
BCEN331272:2:Tyes8200---221002-
BCEN331272:3:Tyes--0------0
BCER226900:1:Tyes12258011011-0
BCER288681:0:Tno1212321241101120
BCER315749:1:Tyes1101101120
BCER405917:1:Tyes1214021411101120
BCER572264:1:Tno1229622971101120
BCLA66692:0:Tyes3173317331743173031743173317331723174
BHAL272558:0:Tyes1425142514240142514241425142514261424
BJAP224911:0:Fyes015684697209420951159156802092-
BLIC279010:0:Tyes3300-32993300032993300330033013299
BLON206672:0:Tyes---01-----
BMAL243160:1:Tno-0-0-10021149
BMAL320388:1:Tno-1211-1211-12121211121112130
BMAL320389:1:Tyes-2-2-12202394
BMEL224914:0:Tno-300---227--3020
BMEL224914:1:Tno0-102300-00--
BMEL359391:0:Tno-74---0--75740
BMEL359391:1:Tno983-0983983-983983--
BOVI236:0:Tyes-----0----
BOVI236:1:Tyes9249240924924-924924-925
BPSE272560:0:Tyes--101151---1
BPSE272560:1:Tyes-0----002-
BPSE320372:0:Tno--101561---1
BPSE320372:1:Tno-2----220-
BPSE320373:0:Tno--01691690---0
BPSE320373:1:Tno-2----220-
BPUM315750:0:Tyes1101101120
BSP36773:1:Tyes0840---577840840838-
BSP36773:2:Tyes--0114114----0
BSP376:0:Tyes--403139439504043943920
BSUB:0:Tyes1-01101120
BSUI204722:0:Tyes-1---77--0-
BSUI204722:1:Tyes1059-010591059-10591059-1060
BSUI470137:0:Tno-1---77--0-
BSUI470137:1:Tno1084-010841084-10841084-1085
BTHA271848:0:Tno--0------0
BTHA271848:1:Tno8989-0190898991-
BTHU281309:1:Tno1211521161101120
BTHU412694:1:Tno1196919701101120
BVIE269482:5:Tyes---10-----
BVIE269482:6:Tyes4520-----0--
BVIE269482:7:Tyes--0--0117-1680
BWEI315730:4:Tyes1214821491101120
BXEN266265:0:Tyes--1--1-0-1
BXEN266265:1:Tyes0351-00-0-493-
CACE272562:1:Tyes--------0-
CAULO:0:Tyes2-1-21220-
CBEI290402:0:Tyes--50610506--3506
CBOT508765:1:Tyes1101101120
CBOT515621:2:Tyes1101101130
CDIF272563:1:Tyes1321132112211321201
CGLU196627:0:Tyes11-110112-
CJAP155077:0:Tyes---01-----
CMIC31964:2:Tyes----0-----
CMIC443906:2:Tyes---10-----
CNOV386415:0:Tyes1121121102
CPER195102:1:Tyes-121121102
CPER195103:0:Tno-0100100-1
CPER289380:3:Tyes--2--2--02
CPHY357809:0:Tyes--1-21248680--868
CSAL290398:0:Tyes00-00-001-
CSP501479:2:Fyes0---------
CSP501479:4:Fyes--0-------
CTET212717:0:Tyes1132613271326132601326132613251327
CVIO243365:0:Tyes1121121102
DGEO319795:0:Tyes28001-2801-280-1
DRED349161:0:Tyes-1211-1102
DSHI398580:5:Tyes-0---10--1
ECAR218491:0:Tyes19104291429001477120
ECOL199310:0:Tno0015852224222519941993158615871585
ECOL316407:0:Tno1037102700270125562555199619951997
ECOL331111:6:Tno107410740296129627062461246124622460
ECOL362663:0:Tno001401192119221771802112614021401
ECOL364106:1:Tno0014291950195117981430143014311429
ECOL405955:2:Tyes0012741850185116441643127512761274
ECOL409438:6:Tyes1249103007300828532852248024812479
ECOL413997:0:Tno022012081697169815551554120912101208
ECOL439855:4:Tno1026012944294527942793239123922390
ECOL469008:0:Tno224033632862286130043005336233613363
ECOL481805:0:Tno0100510062647264628052806313431333135
ECOL585034:0:Tno106210286928706932370237023712369
ECOL585035:0:Tno0014112017201817991412141214131411
ECOL585055:0:Tno116510307730787392529252925302528
ECOL585056:2:Tno109010297129727052491249124922490
ECOL585057:0:Tno0016191969017871786162016211619
ECOL585397:0:Tno0014302052205218121811143114321430
ECOL83334:0:Tno132310318231839433043263426352633
ECOLI:0:Tno1063102767276826222621228222832281
ECOO157:0:Tno1500013329333011203185282328242822
EFER585054:1:Tyes2467012716271726922693246724682466
ESP42895:1:Tyes38683279328012913010386838673869
FNUC190304:0:Tyes-----0---0
FSP1855:0:Tyes--------0-
GKAU235909:1:Tyes1359135913600135913601359135913581360
GOXY290633:5:Tyes-0--------
GTHE420246:1:Tyes1342013431342013431342134213411343
GVIO251221:0:Tyes9369361936936-9369360-
HAUR316274:2:Tyes1551-210-1551-87-
HCHE349521:0:Tyes-125301253125301253125312510
HINF281310:0:Tyes1-01101120
HINF374930:0:Tyes1054135921113101102
HINF71421:0:Tno15940113181120
HMOD498761:0:Tyes-101--1120
HSOM205914:1:Tyes5391015271527721539722720-
HSOM228400:0:Tno118741873743345476477120
JSP290400:1:Tyes5051501--501502-5000
KPNE272620:2:Tyes63901109810992012639639640638
KRAD266940:2:Fyes00227800-0---
LACI272621:0:Tyes-121121102
LCAS321967:1:Tyes1101101120
LCHO395495:0:Tyes-0110813-11089931107121108
LLAC272622:5:Tyes--1--1--01
LLAC272623:0:Tyes1121121102
LXYL281090:0:Tyes----2---0-
MHYO262719:0:Tyes----0-----
MHYO262722:0:Tno----0-----
MHYO295358:0:Tno----0-----
MLOT266835:2:Tyes136573055528252823658872475302004
MSME246196:0:Tyes22751371244410-244524451377-
MSP164756:1:Tno-2-2--2-0-
MSP164757:0:Tno-232--2-0-
MSP189918:2:Tyes-2-2--2-0-
MSP266779:3:Tyes-034593460346034593460-3458-
MSP400668:0:Tyes812701699169812612741271276-
MSUC221988:0:Tyes141141-141160160314114116030
MTHE264732:0:Tyes22-2212201
NSP35761:1:Tyes-5303240-312-0---
OANT439375:4:Tyes-22159---716716-0
OANT439375:5:Tyes0--114811471--2-
OIHE221109:0:Tyes1121121102
PACN267747:0:Tyes00-00-001-
PAER208963:0:Tyes--------0-
PAER208964:0:Tno--------0-
PENT384676:0:Tyes--------0-
PFLU205922:0:Tyes-423---12231-02232
PFLU216595:1:Tyes-1373523111095231373137313750
PFLU220664:0:Tyes-2491492-4914924920491
PING357804:0:Tyes1102311101120
PLUM243265:0:Fyes1315031491101120
PMOB403833:0:Tyes9449440285285943944285286-
PMUL272843:1:Tyes1112211211225122511731102
PNAP365044:8:Tyes---2--2-0-
PPRO298386:1:Tyes110113141120
PPUT160488:0:Tno--------0-
PPUT351746:0:Tyes--------0-
PPUT76869:0:Tno--------0-
PSP117:0:Tyes3337773-23302
PSP296591:2:Tyes---1--1-0-
PSYR205918:0:Tyes4184181112418418111241841801112
PSYR223283:2:Tyes--10691110691068106801069
RCAS383372:0:Tyes--------0-
RDEN375451:4:Tyes-2424--024252424--2425
RETL347834:0:Tyes--0--0----
RETL347834:3:Tyes-0--------
RETL347834:4:Tyes-------0--
RETL347834:5:Tyes2553--14651466-592-03343
REUT264198:2:Tyes-0--0---2-
REUT264198:3:Tyes--10-100-1
REUT381666:1:Tyes-1011011-0
RFER338969:1:Tyes00-0026900269114642690
RLEG216596:2:Tyes0---------
RLEG216596:5:Tyes-0--------
RLEG216596:6:Tyes--703632633703009722901
RRUB269796:1:Tyes01111100-00--
RSAL288705:0:Tyes0---0-----
RSOL267608:0:Tyes0---------
RSOL267608:1:Tyes-17790241-240-2411240
RSP101510:3:Fyes2325432532232532203253
RSP357808:0:Tyes-10--0--17410
RSPH272943:3:Tyes19401194194-----
RSPH349101:1:Tno27101271271-----
RSPH349102:5:Tyes--0-------
RXYL266117:0:Tyes9467517522047204720482047120
SAGA205921:0:Tno1121121102
SAGA208435:0:Tno1121121102
SAGA211110:0:Tyes1121121102
SAVE227882:1:Fyes86465376536864065364414441444146536
SBOY300268:1:Tyes372372-1934193301510151019351332
SCO:2:Fyes1957058055806195716081957195719571956
SDEG203122:0:Tyes--012-----
SDYS300267:1:Tyes2685-28062917291828062685268528080
SENT209261:0:Tno870187878887878688
SENT220341:0:Tno880188888988888789
SENT295319:0:Tno-187186--0--10
SENT321314:2:Tno117901101120
SENT454169:2:Tno11701691101120
SERY405948:0:Tyes3664366436631077366436630366436643663
SFLE198214:0:Tyes946102593259260221582158-602
SFLE373384:0:Tno970102558255761220692069-2286
SGLO343509:3:Tyes0--01830359001359
SHAE279808:0:Tyes1101101120
SHAL458817:0:Tyes1101484114831120
SHIGELLA:0:Tno880102487194552919451945-529
SMED366394:1:Tyes-0----439---
SMED366394:2:Tyes984-54111131114985-0957-
SMED366394:3:Tyes---------0
SMEL266834:1:Tyes615254255691692616-0583-
SMEL266834:2:Tyes------0--623
SPEA398579:0:Tno1101839118401120
SPRO399741:1:Tyes42000962474547449624888488848874889
SSAP342451:2:Tyes1-21121102
SSON300269:1:Tyes40840816312085208601632163220831631
SSP292414:1:Tyes------0---
SSP292414:2:Tyes-10--0----
SSP644076:4:Fyes3104103332330-
SSP94122:1:Tyes---23---0-
STHE292459:0:Tyes--1597--15971596-01597
STYP99287:1:Tyes11901891101120
SWOL335541:0:Tyes-01-------
TDEN243275:0:Tyes-----0----
TLET416591:0:Tyes-1155-1155205-0115511521154
TMAR243274:0:Tyes82508268258253825825828826
TPET390874:0:Tno33985986-09869869870
TPSE340099:0:Tyes1121121102
TROS309801:0:Tyes--181--0180--0
TSP1755:0:Tyes0767767786
TSP28240:0:Tyes0137138-137138137137-138
TTEN273068:0:Tyes1531011530531120
TWHI203267:0:Tyes----0-----
TWHI218496:0:Tno----0-----
VCHO:0:Tyes-----0----
VCHO:1:Fyes11011-1120
VCHO345073:0:Tno11211-1102
VCHO345073:1:Tno-----0----
VEIS391735:1:Tyes2307101610159421583094294215780
VFIS312309:2:Tyes1101101120
VPAR223926:0:Tyes1121121102
VVUL196600:1:Tyes4164164154164160416416417415
VVUL216895:0:Tno1101101120
XAUT78245:1:Tyes-0--------
YENT393305:1:Tyes152452514314427141120
YPES187410:5:Tno3576347434730130513576138413822352
YPES214092:3:Tno343201337333725193432200920111058
YPES349746:2:Tno382966866730430503829154615482772
YPES360102:3:Tyes37363820381901194373619111913704
YPES377628:2:Tno36232332340131593623207220742458
YPES386656:2:Tno277826702669297229710277813561357906
YPSE273123:2:Tno37144404410131483714244324451432
YPSE349747:2:Tno383633363335016533836134313412293



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