CANDIDATE ID: 40

CANDIDATE ID: 40

NUMBER OF GENES: 10
AVERAGE SCORE:    9.9983002e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6093 (bamA) (bamA)
   Products of gene:
     - G6093-MONOMER (BamA)
     - CPLX0-3933 (Outer Membrane Protein Assembly Complex)

- G6092 (ispU) (b0174)
   Products of gene:
     - UPPSYN-MONOMER (subunit of undecaprenyl diphosphate synthase)
     - UPPSYN-CPLX (undecaprenyl diphosphate synthase)
       Reactions:
        (2E,6E)-farnesyl diphosphate + 8 isopentenyl diphosphate  ->  di-trans,poly-cis-undecaprenyl diphosphate + 8 diphosphate
         In pathways
         POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))
         PWY-5785 (di-trans,poly-cis-undecaprenyl phosphate biosynthesis)

- EG12715 (dxr) (b0173)
   Products of gene:
     - DXPREDISOM-MONOMER (Dxr)
     - DXPREDISOM-CPLX (1-deoxy-D-xylulose 5-phosphate reductoisomerase)
       Reactions:
        2-C-methyl-D-erythritol-4-phosphate + NADP+  =  1-deoxy-D-xylulose 5-phosphate + NADPH + H+
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG12436 (rseP) (b0176)
   Products of gene:
     - EG12436-MONOMER (RseP zinc protease)

- EG11539 (pyrH) (b0171)
   Products of gene:
     - UMPKI-MONOMER (PyrH)
     - UMPKI-CPLX (uridylate kinase)
       Reactions:
        ATP + uridine-5'-phosphate  =  ADP + UDP + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)
         PWY-5687 (pyrimidine ribonucleotides interconversion)
         P1-PWY (P1-PWY)

- EG11033 (tsf) (b0170)
   Products of gene:
     - EG11033-MONOMER (protein chain elongation factor EF-Ts)

- EG10901 (rpsB) (b0169)
   Products of gene:
     - EG10901-MONOMER (30S ribosomal subunit protein S2)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10570 (map) (b0168)
   Products of gene:
     - EG10570-MONOMER (methionine aminopeptidase)
       Reactions:
        EC# 3.4.11.18

- EG10335 (frr) (b0172)
   Products of gene:
     - EG10335-MONOMER (ribosome recycling factor)

- EG10139 (cdsA) (b0175)
   Products of gene:
     - CDPDIGLYSYN-MONOMER (CDP-diglyceride synthetase)
       Reactions:
        CTP + a 1,2-diacylglycerol-3-phosphate  ->  diphosphate + a CDP-diacylglycerol
         In pathways
         PHOSLIPSYN2-PWY (PHOSLIPSYN2-PWY)
         PWY4FS-8 (PWY4FS-8)
         PHOSLIPSYN-PWY (phospholipid biosynthesis I)
         PWY4FS-7 (PWY4FS-7)
         PWY-5667 (CDP-diacylglycerol biosynthesis I)
         PWY-5981 (PWY-5981)
         PWY0-1319 (CDP-diacylglycerol biosynthesis II)
        CTP + a 2,3,4-saturated L-phosphatidate  =  diphosphate + a CDP-2,3,4-saturated-diacylglycerol



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 211
Effective number of orgs (counting one per cluster within 468 clusters): 146

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175810
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295310
YPES386656 ncbi Yersinia pestis Pestoides F10
YPES377628 ncbi Yersinia pestis Nepal51610
YPES360102 ncbi Yersinia pestis Antiqua10
YPES349746 ncbi Yersinia pestis Angola10
YPES214092 ncbi Yersinia pestis CO9210
YPES187410 ncbi Yersinia pestis KIM 1010
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808110
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A10
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 31101810
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC1033110
XFAS405440 ncbi Xylella fastidiosa M1210
XFAS183190 ncbi Xylella fastidiosa Temecula110
XFAS160492 ncbi Xylella fastidiosa 9a5c10
XCAM487884 Xanthomonas campestris pv. paulliniae10
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-1010
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 800410
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 3391310
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 30610
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106339
VFIS312309 ncbi Vibrio fischeri ES11410
VEIS391735 ncbi Verminephrobacter eiseniae EF01-29
VCHO345073 ncbi Vibrio cholerae O3959
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169619
TTUR377629 ncbi Teredinibacter turnerae T79019
TDEN292415 ncbi Thiobacillus denitrificans ATCC 2525910
TCRU317025 ncbi Thiomicrospira crunogena XCL-29
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT210
SSP94122 ncbi Shewanella sp. ANA-310
SSON300269 ncbi Shigella sonnei Ss04610
SSED425104 ncbi Shewanella sediminis HAW-EB310
SPRO399741 ncbi Serratia proteamaculans 56810
SPEA398579 ncbi Shewanella pealeana ATCC 70034510
SONE211586 ncbi Shewanella oneidensis MR-110
SMEL266834 ncbi Sinorhizobium meliloti 102110
SMED366394 ncbi Sinorhizobium medicae WSM41910
SLOI323850 ncbi Shewanella loihica PV-410
SHIGELLA ncbi Shigella flexneri 2a str. 2457T10
SHAL458817 ncbi Shewanella halifaxensis HAW-EB410
SGLO343509 ncbi Sodalis glossinidius morsitans10
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB9
SFLE373384 ncbi Shigella flexneri 5 str. 840110
SFLE198214 ncbi Shigella flexneri 2a str. 30110
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47610
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6710
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915010
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1810
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty210
SDYS300267 ncbi Shigella dysenteriae Sd19710
SDEN318161 ncbi Shewanella denitrificans OS21710
SDEG203122 ncbi Saccharophagus degradans 2-4010
SBOY300268 ncbi Shigella boydii Sb22710
SBAL402882 ncbi Shewanella baltica OS18510
SBAL399599 ncbi Shewanella baltica OS19510
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170259
RSOL267608 ncbi Ralstonia solanacearum GMI100010
RRUB269796 ncbi Rhodospirillum rubrum ATCC 1117010
RPAL316058 ncbi Rhodopseudomonas palustris HaA29
RMET266264 ncbi Ralstonia metallidurans CH3410
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38419
RFER338969 ncbi Rhodoferax ferrireducens T11810
REUT381666 ncbi Ralstonia eutropha H1610
REUT264198 ncbi Ralstonia eutropha JMP13410
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a10
PSTU379731 ncbi Pseudomonas stutzeri A150110
PSP56811 Psychrobacter sp.10
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-19
PSP296591 ncbi Polaromonas sp. JS66610
PPUT76869 ncbi Pseudomonas putida GB-110
PPUT351746 ncbi Pseudomonas putida F110
PPUT160488 ncbi Pseudomonas putida KT244010
PPRO298386 ncbi Photobacterium profundum SS910
PNAP365044 ncbi Polaromonas naphthalenivorans CJ210
PMUL272843 ncbi Pasteurella multocida multocida Pm7010
PMEN399739 ncbi Pseudomonas mendocina ymp10
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO110
PING357804 ncbi Psychromonas ingrahamii 3710
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC12510
PFLU220664 ncbi Pseudomonas fluorescens Pf-510
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
PFLU205922 ncbi Pseudomonas fluorescens Pf0-110
PENT384676 ncbi Pseudomonas entomophila L4810
PCRY335284 ncbi Psychrobacter cryohalolentis K510
PATL342610 ncbi Pseudoalteromonas atlantica T6c10
PARC259536 ncbi Psychrobacter arcticus 273-410
PAER208964 ncbi Pseudomonas aeruginosa PAO110
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1410
OANT439375 ncbi Ochrobactrum anthropi ATCC 491889
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2559
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970710
NMUL323848 ncbi Nitrosospira multiformis ATCC 2519610
NMEN374833 ncbi Neisseria meningitidis 05344210
NMEN272831 ncbi Neisseria meningitidis FAM1810
NMEN122587 ncbi Neisseria meningitidis Z249110
NMEN122586 ncbi Neisseria meningitidis MC5810
NHAM323097 ncbi Nitrobacter hamburgensis X1410
NGON242231 ncbi Neisseria gonorrhoeae FA 109010
NEUT335283 ncbi Nitrosomonas eutropha C9110
NEUR228410 ncbi Nitrosomonas europaea ATCC 1971810
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E10
MSP400668 ncbi Marinomonas sp. MWYL110
MPET420662 ncbi Methylibium petroleiphilum PM110
MMAR394221 ncbi Maricaulis maris MCS1010
MMAG342108 ncbi Magnetospirillum magneticum AMB-19
MFLA265072 ncbi Methylobacillus flagellatus KT10
MEXT419610 ncbi Methylobacterium extorquens PA19
MCAP243233 ncbi Methylococcus capsulatus Bath10
MAQU351348 ncbi Marinobacter aquaeolei VT810
LPNE400673 ncbi Legionella pneumophila Corby9
LPNE297246 ncbi Legionella pneumophila Paris9
LPNE297245 ncbi Legionella pneumophila Lens9
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 19
LCHO395495 ncbi Leptothrix cholodnii SP-610
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857810
JSP375286 ncbi Janthinobacterium sp. Marseille10
ILOI283942 ncbi Idiomarina loihiensis L2TR10
HSOM228400 ncbi Haemophilus somnus 233610
HSOM205914 ncbi Haemophilus somnus 129PT10
HNEP81032 Hyphomonas neptunium9
HINF71421 ncbi Haemophilus influenzae Rd KW2010
HINF374930 ncbi Haemophilus influenzae PittEE10
HINF281310 ncbi Haemophilus influenzae 86-028NP10
HHAL349124 ncbi Halorhodospira halophila SL110
HDUC233412 ncbi Haemophilus ducreyi 35000HP10
HCHE349521 ncbi Hahella chejuensis KCTC 239610
HARS204773 ncbi Herminiimonas arsenicoxydans10
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-29
GOXY290633 ncbi Gluconobacter oxydans 621H10
GKAU235909 ncbi Geobacillus kaustophilus HTA4269
GBET391165 ncbi Granulibacter bethesdensis CGDNIH19
ESP42895 Enterobacter sp.10
EFER585054 ncbi Escherichia fergusonii ATCC 3546910
ECOO157 ncbi Escherichia coli O157:H7 EDL93310
ECOL83334 Escherichia coli O157:H710
ECOL585397 ncbi Escherichia coli ED1a10
ECOL585057 ncbi Escherichia coli IAI3910
ECOL585056 ncbi Escherichia coli UMN02610
ECOL585055 ncbi Escherichia coli 5598910
ECOL585035 ncbi Escherichia coli S8810
ECOL585034 ncbi Escherichia coli IAI110
ECOL481805 ncbi Escherichia coli ATCC 873910
ECOL469008 ncbi Escherichia coli BL21(DE3)10
ECOL439855 ncbi Escherichia coli SMS-3-510
ECOL413997 ncbi Escherichia coli B str. REL60610
ECOL409438 ncbi Escherichia coli SE1110
ECOL405955 ncbi Escherichia coli APEC O19
ECOL364106 ncbi Escherichia coli UTI8910
ECOL362663 ncbi Escherichia coli 53610
ECOL331111 ncbi Escherichia coli E24377A10
ECOL316407 ncbi Escherichia coli K-12 substr. W311010
ECOL199310 ncbi Escherichia coli CFT0739
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104310
DSHI398580 ncbi Dinoroseobacter shibae DFL 1210
DNOD246195 ncbi Dichelobacter nodosus VCS1703A9
DARO159087 ncbi Dechloromonas aromatica RCB10
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247210
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA9
CSP78 Caulobacter sp.10
CSAL290398 ncbi Chromohalobacter salexigens DSM 304310
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)10
CPSY167879 ncbi Colwellia psychrerythraea 34H10
CJAP155077 Cellvibrio japonicus10
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1119
CBUR360115 ncbi Coxiella burnetii RSA 3319
CBUR227377 ncbi Coxiella burnetii RSA 4939
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN10
CBLO203907 ncbi Candidatus Blochmannia floridanus10
CAULO ncbi Caulobacter crescentus CB1510
BVIE269482 ncbi Burkholderia vietnamiensis G410
BTHA271848 ncbi Burkholderia thailandensis E26410
BSUB ncbi Bacillus subtilis subtilis 1689
BSP376 Bradyrhizobium sp.10
BSP36773 Burkholderia sp.10
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b10
BPSE272560 ncbi Burkholderia pseudomallei K9624310
BPET94624 Bordetella petrii10
BPER257313 ncbi Bordetella pertussis Tohama I9
BPAR257311 ncbi Bordetella parapertussis 128229
BMAL320389 ncbi Burkholderia mallei NCTC 1024710
BMAL320388 ncbi Burkholderia mallei SAVP110
BMAL243160 ncbi Burkholderia mallei ATCC 2334410
BLIC279010 ncbi Bacillus licheniformis ATCC 145809
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1109
BCLA66692 ncbi Bacillus clausii KSM-K169
BCIC186490 Candidatus Baumannia cicadellinicola10
BCEN331272 ncbi Burkholderia cenocepacia HI242410
BCEN331271 ncbi Burkholderia cenocepacia AU 105410
BBRO257310 ncbi Bordetella bronchiseptica RB509
BAMY326423 ncbi Bacillus amyloliquefaciens FZB429
BAMB398577 ncbi Burkholderia ambifaria MC40-610
BAMB339670 ncbi Burkholderia ambifaria AMMD10
ASP76114 ncbi Aromatoleum aromaticum EbN110
ASP62977 ncbi Acinetobacter sp. ADP110
ASP62928 ncbi Azoarcus sp. BH7210
ASP232721 ncbi Acidovorax sp. JS4210
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44910
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0310
APLE416269 ncbi Actinobacillus pleuropneumoniae L2010
AHYD196024 Aeromonas hydrophila dhakensis10
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327010
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-110
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C9
ACRY349163 ncbi Acidiphilium cryptum JF-510
ACAU438753 ncbi Azorhizobium caulinodans ORS 5719
ABOR393595 ncbi Alcanivorax borkumensis SK210
ABAU360910 ncbi Bordetella avium 197N10
AAVE397945 ncbi Acidovorax citrulli AAC00-19


Names of the homologs of the genes in the group in each of these orgs
  G6093   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10570   EG10335   EG10139   
YPSE349747 YPSIP31758_1021YPSIP31758_1018YPSIP31758_1017YPSIP31758_1020YPSIP31758_1015YPSIP31758_1014YPSIP31758_1013YPSIP31758_1012YPSIP31758_1016YPSIP31758_1019
YPSE273123 YPTB2995YPTB2998YPTB2999YPTB2996YPTB3001YPTB3002YPTB3003YPTB3004YPTB3000YPTB2997
YPES386656 YPDSF_1660YPDSF_1663YPDSF_1664YPDSF_1661YPDSF_1666YPDSF_1668YPDSF_1669YPDSF_1670YPDSF_1665YPDSF_1662
YPES377628 YPN_2948YPN_2951YPN_2952YPN_2949YPN_2954YPN_2956YPN_2957YPN_2958YPN_2953YPN_2950
YPES360102 YPA_0528YPA_0525YPA_0524YPA_0527YPA_0522YPA_0520YPA_0518YPA_0517YPA_0523YPA_0526
YPES349746 YPANGOLA_A3427YPANGOLA_A3430YPANGOLA_A3431YPANGOLA_A3428YPANGOLA_A3433YPANGOLA_A3434YPANGOLA_A3435YPANGOLA_A0935YPANGOLA_A3432YPANGOLA_A3429
YPES214092 YPO1052YPO1049YPO1048YPO1051YPO1046YPO1045YPO1044YPO1043YPO1047YPO1050
YPES187410 Y3127Y3130Y3131Y3128Y3134Y3135Y3137Y3138Y3133Y3129
YENT393305 YE3276YE3279YE3280YE3277YE3282YE3283YE3284YE3285YE3281YE3278
XORY360094 XOOORF_3034XOOORF_3030XOOORF_3032XOOORF_3033XOOORF_3028XOOORF_3026XOOORF_3025XOOORF_3018XOOORF_3029XOOORF_3031
XORY342109 XOO1858XOO1862XOO1860XOO1859XOO1864XOO1866XOO1867XOO1874XOO1863XOO1861
XORY291331 XOO1968XOO1972XOO1970XOO1969XOO1974XOO1976XOO1977XOO1983XOO1973XOO1971
XFAS405440 XFASM12_0357XFASM12_0361XFASM12_0359XFASM12_0358XFASM12_0368XFASM12_2150XFASM12_2151XFASM12_0091XFASM12_0362XFASM12_0360
XFAS183190 PD_0326PD_0330PD_0328PD_0327PD_0337PD_1959PD_1960PD_0085PD_0331PD_0329
XFAS160492 XF1046XF1050XF1048XF1047XF1058XF2579XF2580XF0111XF1051XF1049
XCAM487884 XCC-B100_2931XCC-B100_2927XCC-B100_2929XCC-B100_2930XCC-B100_2925XCC-B100_2923XCC-B100_2922XCC-B100_2915XCC-B100_2926XCC-B100_2928
XCAM316273 XCAORF_1632XCAORF_1636XCAORF_1634XCAORF_1633XCAORF_1638XCAORF_1641XCAORF_1642XCAORF_1649XCAORF_1637XCAORF_1635
XCAM314565 XC_2873XC_2869XC_2871XC_2872XC_2867XC_2864XC_2863XC_2856XC_2868XC_2870
XCAM190485 XCC1365XCC1369XCC1367XCC1366XCC1371XCC1374XCC1375XCC1382XCC1370XCC1368
XAXO190486 XAC1413XAC1417XAC1415XAC1414XAC1419XAC1421XAC1422XAC1428XAC1418XAC1416
VVUL196600 VV2549VV2553VV2551VV2550VV2555VV2556VV2557VV2554VV2552
VPAR223926 VP2310VP2314VP2312VP2311VP2316VP2317VP2318VP2315VP2313
VFIS312309 VF1954VF1958VF1956VF1955VF1960VF1961VF1962VF1963VF1959VF1957
VEIS391735 VEIS_1446VEIS_1442VEIS_1444VEIS_1445VEIS_1440VEIS_1439VEIS_1438VEIS_3610VEIS_1441
VCHO345073 VC0395_A1843VC0395_A1847VC0395_A1845VC0395_A1844VC0395_A1849VC0395_A1850VC0395_A1851VC0395_A1848VC0395_A1846
VCHO VC2252VC2256VC2254VC2253VC2258VC2259VC2260VC2257VC2255
TTUR377629 TERTU_1012TERTU_1009TERTU_1011TERTU_1007TERTU_1006TERTU_1005TERTU_1004TERTU_1008TERTU_1010
TDEN292415 TBD_0793TBD_0789TBD_0791TBD_0792TBD_0787TBD_0786TBD_0785TBD_0784TBD_0788TBD_0790
TCRU317025 TCR_1278TCR_1281TCR_1279TCR_1283TCR_1284TCR_1285TCR_1286TCR_1282TCR_1280
STYP99287 STM0224STM0221STM0220STM0223STM0218STM0217STM0216STM0215STM0219STM0222
SSP94122 SHEWANA3_2807SHEWANA3_2811SHEWANA3_2809SHEWANA3_2808SHEWANA3_2813SHEWANA3_2814SHEWANA3_2815SHEWANA3_2816SHEWANA3_2812SHEWANA3_2810
SSON300269 SSO_0189SSO_0186SSO_0185SSO_0188SSO_0183SSO_0182SSO_0181SSO_0180SSO_0184SSO_0187
SSED425104 SSED_3153SSED_3157SSED_3155SSED_3154SSED_3159SSED_3160SSED_3161SSED_3162SSED_3158SSED_3156
SPRO399741 SPRO_3782SPRO_3785SPRO_3786SPRO_3783SPRO_3788SPRO_3789SPRO_3790SPRO_3791SPRO_3787SPRO_3784
SPEA398579 SPEA_2877SPEA_2881SPEA_2879SPEA_2878SPEA_2883SPEA_2884SPEA_2885SPEA_2886SPEA_2882SPEA_2880
SONE211586 SO_1637SO_1633SO_1635SO_1636SO_1631SO_1630SO_1629SO_1627SO_1632SO_1634
SMEL266834 SMC02094SMC02097SMC03105SMC02095SMC02099SMC02100SMC02101SMC00298SMC02098SMC02096
SMED366394 SMED_1138SMED_1135SMED_2879SMED_1137SMED_1133SMED_1132SMED_1131SMED_1458SMED_1134SMED_1136
SLOI323850 SHEW_2627SHEW_2631SHEW_2629SHEW_2628SHEW_2633SHEW_2634SHEW_2635SHEW_2636SHEW_2632SHEW_2630
SHIGELLA YAETYAESYAEMYAELPYRHTSFRPSBMAPFRRCDSA
SHAL458817 SHAL_2973SHAL_2977SHAL_2975SHAL_2974SHAL_2979SHAL_2980SHAL_2981SHAL_2982SHAL_2978SHAL_2976
SGLO343509 SG1935SG1938SG1939SG1936SG1941SG1942SG1943SG1944SG1940SG1937
SFUM335543 SFUM_3745SFUM_1782SFUM_1784SFUM_1785SFUM_1780SFUM_1778SFUM_1577SFUM_1781SFUM_1783
SFLE373384 SFV_0160SFV_0157SFV_0156SFV_0159SFV_0154SFV_0153SFV_0152SFV_0151SFV_0155SFV_0158
SFLE198214 AAN41829.1AAN41826.1AAN41825.1AAN41828.1AAN41823.1AAN41822.1AAN41821.1AAN41820.1AAN41824.1AAN41827.1
SENT454169 SEHA_C0262SEHA_C0259SEHA_C0258SEHA_C0261SEHA_C0256SEHA_C0255SEHA_C0254SEHA_C0252SEHA_C0257SEHA_C0260
SENT321314 SCH_0224SCH_0221SCH_0220SCH_0223SCH_0218SCH_0217SCH_0216SCH_0215SCH_0219SCH_0222
SENT295319 SPA0231SPA0228SPA0227SPA0230SPA0225SPA0224SPA0223SPA0221SPA0226SPA0229
SENT220341 STY0247STY0244STY0243STY0246STY0241STY0240STY0239STY0238STY0242STY0245
SENT209261 T0225T0222T0221T0224T0219T0218T0217T0216T0220T0223
SDYS300267 SDY_0193SDY_0190SDY_0189SDY_0192SDY_0187SDY_0186SDY_0185SDY_0184SDY_0188SDY_0191
SDEN318161 SDEN_1562SDEN_1558SDEN_1560SDEN_1561SDEN_1556SDEN_1555SDEN_1554SDEN_1553SDEN_1557SDEN_1559
SDEG203122 SDE_2589SDE_2593SDE_2591SDE_2590SDE_2595SDE_2596SDE_2597SDE_2601SDE_2594SDE_2592
SBOY300268 SBO_0165SBO_0162SBO_0161SBO_0164SBO_0159SBO_0158SBO_0157SBO_0156SBO_0160SBO_0163
SBAL402882 SHEW185_1453SHEW185_1449SHEW185_1451SHEW185_1452SHEW185_1447SHEW185_1446SHEW185_1445SHEW185_1444SHEW185_1448SHEW185_1450
SBAL399599 SBAL195_1489SBAL195_1485SBAL195_1487SBAL195_1488SBAL195_1483SBAL195_1482SBAL195_1481SBAL195_1480SBAL195_1484SBAL195_1486
RSPH349102 RSPH17025_2146RSPH17025_2151RSPH17025_2149RSPH17025_2148RSPH17025_2153RSPH17025_1511RSPH17025_1510RSPH17025_2993RSPH17025_2150
RSOL267608 RSC1412RSC1408RSC1410RSC1411RSC1406RSC1405RSC1404RSC1403RSC1407RSC1409
RRUB269796 RRU_A1594RRU_A1590RRU_A1592RRU_A1593RRU_A1588RRU_A1587RRU_A1586RRU_A0733RRU_A1589RRU_A1591
RPAL316058 RPB_0751RPB_2824RPB_2822RPB_2821RPB_2826RPB_2828RPB_0058RPB_2825RPB_2823
RMET266264 RMET_1443RMET_1439RMET_1441RMET_1442RMET_1437RMET_1436RMET_1435RMET_1434RMET_1438RMET_1440
RLEG216596 RL2228RL2225RL4372RL2227RL2223RL2222RL2221RL2069RL2224
RFER338969 RFER_1996RFER_2675RFER_1994RFER_1995RFER_1991RFER_1990RFER_1989RFER_0852RFER_1992RFER_1993
REUT381666 H16_A2047H16_A2051H16_A2049H16_A2048H16_A2053H16_A2054H16_A2055H16_A2056H16_A2052H16_A2088
REUT264198 REUT_A1873REUT_A1877REUT_A1875REUT_A1874REUT_A1879REUT_A1880REUT_A1881REUT_A1882REUT_A1878REUT_B4016
PSYR223283 PSPTO_1542PSPTO_1538PSPTO_1540PSPTO_1541PSPTO_1536PSPTO_1535PSPTO_1534PSPTO_1533PSPTO_1537PSPTO_1539
PSYR205918 PSYR_3794PSYR_1347PSYR_1349PSYR_1350PSYR_1345PSYR_1344PSYR_1343PSYR_1342PSYR_1346PSYR_1348
PSTU379731 PST_1545PST_1541PST_1543PST_1544PST_1539PST_1538PST_1537PST_1536PST_1540PST_1542
PSP56811 PSYCPRWF_1796PSYCPRWF_1800PSYCPRWF_1798PSYCPRWF_1797PSYCPRWF_1802PSYCPRWF_0559PSYCPRWF_0558PSYCPRWF_0557PSYCPRWF_1801PSYCPRWF_1799
PSP312153 PNUC_1443PNUC_1447PNUC_1445PNUC_1449PNUC_1450PNUC_1451PNUC_1452PNUC_1448PNUC_1446
PSP296591 BPRO_2687BPRO_2691BPRO_2689BPRO_2688BPRO_2693BPRO_2694BPRO_2695BPRO_2587BPRO_2692BPRO_2690
PPUT76869 PPUTGB1_2571PPUTGB1_1150PPUTGB1_1152PPUTGB1_1153PPUTGB1_1148PPUTGB1_1147PPUTGB1_1146PPUTGB1_1145PPUTGB1_1149PPUTGB1_1151
PPUT351746 PPUT_2385PPUT_4182PPUT_4180PPUT_4179PPUT_4184PPUT_4185PPUT_4186PPUT_4187PPUT_4183PPUT_4181
PPUT160488 PP_3373PP_1595PP_1597PP_1598PP_1593PP_1592PP_1591PP_1590PP_1594PP_1596
PPRO298386 PBPRA2960PBPRA2964PBPRA2962PBPRA2961PBPRA2966PBPRA2967PBPRA2968PBPRA2969PBPRA2965PBPRA2963
PNAP365044 PNAP_1766PNAP_3193PNAP_1764PNAP_1765PNAP_1760PNAP_1759PNAP_1758PNAP_4816PNAP_1761PNAP_1763
PMUL272843 PM1992PM1989PM1988PM1991PM1986PM1985PM1984PM0459PM1987PM1990
PMEN399739 PMEN_3045PMEN_3049PMEN_3047PMEN_3046PMEN_3051PMEN_3052PMEN_3053PMEN_3054PMEN_3050PMEN_3048
PLUM243265 PLU0680PLU0677PLU0676PLU0679PLU0674PLU0673PLU0672PLU0671PLU0675PLU0678
PING357804 PING_2968PING_2972PING_2970PING_2969PING_2974PING_2975PING_2976PING_3003PING_2973PING_2971
PHAL326442 PSHAA2028PSHAA2032PSHAA2030PSHAA2029PSHAA2034PSHAA2035PSHAA2036PSHAA2037PSHAA2033PSHAA2031
PFLU220664 PFL_1184PFL_1180PFL_1182PFL_1183PFL_1178PFL_1177PFL_1176PFL_1175PFL_1179PFL_1181
PFLU216595 PFLU4104PFLU1274PFLU1276PFLU1277PFLU1272PFLU1271PFLU1270PFLU1269PFLU1273PFLU1275
PFLU205922 PFL_1109PFL_1105PFL_1107PFL_1108PFL_1103PFL_1102PFL_1101PFL_1100PFL_1104PFL_1106
PENT384676 PSEEN4212PSEEN4216PSEEN4214PSEEN4213PSEEN4218PSEEN4219PSEEN4220PSEEN4221PSEEN4217PSEEN4215
PCRY335284 PCRYO_1708PCRYO_1712PCRYO_1710PCRYO_1709PCRYO_1714PCRYO_0390PCRYO_0389PCRYO_0442PCRYO_1713PCRYO_1711
PATL342610 PATL_1257PATL_1253PATL_1255PATL_1256PATL_1251PATL_1250PATL_1249PATL_1248PATL_1252PATL_1254
PARC259536 PSYC_1529PSYC_1533PSYC_1531PSYC_1530PSYC_1535PSYC_0351PSYC_0350PSYC_0396PSYC_1534PSYC_1532
PAER208964 PA3648PA3652PA3650PA3649PA3654PA3655PA3656PA3657PA3653PA3651
PAER208963 PA14_17150PA14_17110PA14_17130PA14_17140PA14_17080PA14_17070PA14_17060PA14_17050PA14_17100PA14_17120
OANT439375 OANT_2036OANT_2033OANT_2035OANT_2031OANT_2030OANT_2029OANT_1910OANT_2032OANT_2887
NWIN323098 NWI_1851NWI_1855NWI_1853NWI_1852NWI_1857NWI_1859NWI_0336NWI_1856NWI_1854
NOCE323261 NOC_0816NOC_0812NOC_0814NOC_0815NOC_0810NOC_0809NOC_0808NOC_0807NOC_0811NOC_0813
NMUL323848 NMUL_A0665NMUL_A0661NMUL_A0663NMUL_A0664NMUL_A0659NMUL_A0658NMUL_A0657NMUL_A2632NMUL_A0660NMUL_A0662
NMEN374833 NMCC_1970NMCC_1966NMCC_1968NMCC_1969NMCC_2067NMCC_2066NMCC_2065NMCC_2058NMCC_1965NMCC_1967
NMEN272831 NMC0173NMC0177NMC0175NMC0174NMC2082NMC2081NMC2080NMC2073NMC0178NMC0176
NMEN122587 NMA0085NMA0081NMA0083NMA0084NMA0326NMA0327NMA0328NMA0337NMA0080NMA0082
NMEN122586 NMB_0182NMB_0186NMB_0184NMB_0183NMB_2103NMB_2102NMB_2101NMB_2093NMB_0187NMB_0185
NHAM323097 NHAM_1702NHAM_1698NHAM_1700NHAM_1701NHAM_1696NHAM_1695NHAM_1694NHAM_0431NHAM_1697NHAM_1699
NGON242231 NGO1801NGO1797NGO1799NGO1800NGO1973NGO1974NGO1975NGO1983NGO1796NGO1798
NEUT335283 NEUT_2027NEUT_2031NEUT_2029NEUT_2028NEUT_2033NEUT_2034NEUT_2035NEUT_0307NEUT_2032NEUT_2030
NEUR228410 NE1710NE1714NE1712NE1711NE1716NE1717NE1718NE0275NE1715NE1713
MSUC221988 MS1924MS1927MS1928MS1925MS1930MS1932MS1933MS1306MS1929MS1926
MSP400668 MMWYL1_1280MMWYL1_1276MMWYL1_1278MMWYL1_1279MMWYL1_1274MMWYL1_1273MMWYL1_1272MMWYL1_1271MMWYL1_1275MMWYL1_1277
MPET420662 MPE_A1971MPE_A1975MPE_A1973MPE_A1972MPE_A1977MPE_A1978MPE_A1979MPE_A1760MPE_A1976MPE_A1974
MMAR394221 MMAR10_1388MMAR10_1384MMAR10_1386MMAR10_1387MMAR10_1382MMAR10_1381MMAR10_1380MMAR10_1044MMAR10_1383MMAR10_1385
MMAG342108 AMB2490AMB2494AMB2492AMB2491AMB2496AMB2498AMB1603AMB2495AMB2493
MFLA265072 MFLA_1522MFLA_1526MFLA_1524MFLA_1523MFLA_1528MFLA_1529MFLA_1530MFLA_1531MFLA_1527MFLA_1525
MEXT419610 MEXT_2081MEXT_2085MEXT_2083MEXT_2082MEXT_2075MEXT_2073MEXT_2206MEXT_2086MEXT_2084
MCAP243233 MCA_2447MCA_0571MCA_0573MCA_0574MCA_0569MCA_0568MCA_0567MCA_0566MCA_0570MCA_0572
MAQU351348 MAQU_2540MAQU_2544MAQU_2542MAQU_2541MAQU_2546MAQU_2547MAQU_2548MAQU_2549MAQU_2545MAQU_2543
LPNE400673 LPC_2839LPC_2842LPC_2840LPC_1141LPC_1142LPC_1143LPC_1153LPC_1140LPC_2841
LPNE297246 LPP0569LPP0566LPP0568LPP1677LPP1678LPP1679LPP1684LPP1676LPP0567
LPNE297245 LPL0545LPL0542LPL0544LPL1671LPL1672LPL1673LPL1683LPL1670LPL0543
LPNE272624 LPG0506LPG0503LPG0505LPG1712LPG1713LPG1714LPG1719LPG1711LPG0504
LCHO395495 LCHO_2842LCHO_2846LCHO_2844LCHO_2843LCHO_2848LCHO_2849LCHO_2850LCHO_1917LCHO_2847LCHO_2845
KPNE272620 GKPORF_B4480GKPORF_B4476GKPORF_B4475GKPORF_B4479GKPORF_B4473GKPORF_B4472GKPORF_B4471GKPORF_B4470GKPORF_B4474GKPORF_B4477
JSP375286 MMA_2050MMA_2054MMA_2052MMA_2051MMA_2056MMA_2057MMA_2058MMA_2059MMA_2055MMA_2053
ILOI283942 IL0837IL0841IL0839IL0838IL0843IL0844IL0845IL0846IL0842IL0840
HSOM228400 HSM_1458HSM_1461HSM_1463HSM_1459HSM_1465HSM_1018HSM_1019HSM_1297HSM_1464HSM_1460
HSOM205914 HS_0980HS_0983HS_0985HS_0981HS_0987HS_1089HS_1088HS_0828HS_0986HS_0982
HNEP81032 HNE_1776HNE_1774HNE_1775HNE_1770HNE_1769HNE_1768HNE_0953HNE_1771HNE_1773
HINF71421 HI_0917HI_0920HI_0807HI_0918HI_1065HI_0914HI_0913HI_1722HI_0808HI_0919
HINF374930 CGSHIEE_07430CGSHIEE_07415CGSHIEE_08025CGSHIEE_07425CGSHIEE_06760CGSHIEE_07445CGSHIEE_07450CGSHIEE_03440CGSHIEE_08020CGSHIEE_07420
HINF281310 NTHI1084NTHI1088NTHI0971NTHI1085NTHI1225NTHI1081NTHI1080NTHI2027NTHI0972NTHI1087
HHAL349124 HHAL_1458HHAL_1462HHAL_1460HHAL_1459HHAL_1464HHAL_1465HHAL_1466HHAL_1467HHAL_1463HHAL_1461
HDUC233412 HD_1191HD_1196HD_1186HD_1192HD_1597HD_1599HD_1600HD_0248HD_1596HD_1193
HCHE349521 HCH_05243HCH_05248HCH_05246HCH_05245HCH_05251HCH_05252HCH_05253HCH_05254HCH_05249HCH_05247
HARS204773 HEAR1343HEAR1339HEAR1341HEAR1342HEAR1337HEAR1336HEAR1335HEAR1334HEAR1338HEAR1340
GTHE420246 GTNG_1107GTNG_1109GTNG_1110GTNG_1105GTNG_1104GTNG_1103GTNG_0127GTNG_1106GTNG_1108
GOXY290633 GOX1818GOX1814GOX1816GOX1817GOX1812GOX0074GOX0075GOX0606GOX1813GOX1815
GKAU235909 GK1253GK1255GK1256GK1251GK1250GK1249GK0128GK1252GK1254
GBET391165 GBCGDNIH1_0940GBCGDNIH1_0936GBCGDNIH1_0938GBCGDNIH1_0939GBCGDNIH1_0934GBCGDNIH1_1279GBCGDNIH1_1653GBCGDNIH1_0935GBCGDNIH1_0937
ESP42895 ENT638_0715ENT638_0712ENT638_0711ENT638_0714ENT638_0709ENT638_0708ENT638_0707ENT638_0706ENT638_0710ENT638_0713
EFER585054 EFER_0199EFER_0196EFER_0195EFER_0198EFER_0193EFER_0192EFER_0191EFER_0190EFER_0194EFER_0197
ECOO157 YAETYAESYAEMYAELPYRHTSFRPSBMAPFRRCDSA
ECOL83334 ECS0179ECS0176ECS0175ECS0178ECS0173ECS0172ECS0171ECS0170ECS0174ECS0177
ECOL585397 ECED1_0183ECED1_0180ECED1_0179ECED1_0182ECED1_0177ECED1_0176ECED1_0175ECED1_0173ECED1_0178ECED1_0181
ECOL585057 ECIAI39_0180ECIAI39_0177ECIAI39_0176ECIAI39_0179ECIAI39_0173ECIAI39_0172ECIAI39_0171ECIAI39_0170ECIAI39_0175ECIAI39_0178
ECOL585056 ECUMN_0174ECUMN_0171ECUMN_0170ECUMN_0173ECUMN_0168ECUMN_0167ECUMN_0166ECUMN_0164ECUMN_0169ECUMN_0172
ECOL585055 EC55989_0171EC55989_0168EC55989_0167EC55989_0170EC55989_0165EC55989_0164EC55989_0163EC55989_0161EC55989_0166EC55989_0169
ECOL585035 ECS88_0187ECS88_0184ECS88_0183ECS88_0186ECS88_0181ECS88_0180ECS88_0179ECS88_0177ECS88_0182ECS88_0185
ECOL585034 ECIAI1_0176ECIAI1_0172ECIAI1_0171ECIAI1_0175ECIAI1_0169ECIAI1_0168ECIAI1_0167ECIAI1_0165ECIAI1_0170ECIAI1_0174
ECOL481805 ECOLC_3483ECOLC_3486ECOLC_3487ECOLC_3484ECOLC_3489ECOLC_3490ECOLC_3491ECOLC_3492ECOLC_3488ECOLC_3485
ECOL469008 ECBD_3442ECBD_3445ECBD_3446ECBD_3443ECBD_3448ECBD_3449ECBD_3450ECBD_3451ECBD_3447ECBD_3444
ECOL439855 ECSMS35_0188ECSMS35_0185ECSMS35_0184ECSMS35_0187ECSMS35_0182ECSMS35_0181ECSMS35_0180ECSMS35_0178ECSMS35_0183ECSMS35_0186
ECOL413997 ECB_00175ECB_00172ECB_00171ECB_00174ECB_00169ECB_00168ECB_00167ECB_00166ECB_00170ECB_00173
ECOL409438 ECSE_0176ECSE_0173ECSE_0172ECSE_0175ECSE_0170ECSE_0169ECSE_0168ECSE_0167ECSE_0171ECSE_0174
ECOL405955 APECO1_1810APECO1_1813APECO1_1814APECO1_1811APECO1_1816APECO1_1818APECO1_1819APECO1_1815APECO1_1812
ECOL364106 UTI89_C0192UTI89_C0189UTI89_C0188UTI89_C0191UTI89_C0186UTI89_C0185UTI89_C0183UTI89_C0182UTI89_C0187UTI89_C0190
ECOL362663 ECP_0185ECP_0182ECP_0181ECP_0184ECP_0179ECP_0178ECP_0177ECP_0176ECP_0180ECP_0183
ECOL331111 ECE24377A_0181ECE24377A_0178ECE24377A_0177ECE24377A_0180ECE24377A_0175ECE24377A_0174ECE24377A_0173ECE24377A_0171ECE24377A_0176ECE24377A_0179
ECOL316407 ECK0176:JW0172:B0177ECK0173:JW0169:B0174ECK0172:JW0168:B0173ECK0175:JW0171:B0176ECK0170:JW0166:B0171ECK0169:JW0165:B0170ECK0168:JW0164:B0169ECK0166:JW0163:B0168ECK0171:JW0167:B0172ECK0174:JW5810:B0175
ECOL199310 C0214C0211C0213C0207C0206C0204C0203C0208C0212
ECAR218491 ECA1039ECA1036ECA1035ECA1038ECA1033ECA1032ECA1031ECA1030ECA1034ECA1037
DSHI398580 DSHI_1499DSHI_1495DSHI_1497DSHI_1498DSHI_1493DSHI_1549DSHI_1548DSHI_0117DSHI_1494DSHI_1496
DNOD246195 DNO_0681DNO_0719DNO_0716DNO_0721DNO_0722DNO_0723DNO_0724DNO_0720DNO_0718
DARO159087 DARO_1750DARO_1746DARO_1748DARO_1749DARO_1744DARO_1743DARO_1742DARO_1740DARO_1745DARO_1747
CVIO243365 CV_2204CV_2200CV_2202CV_2203CV_2198CV_2197CV_2196CV_2397CV_2199CV_2201
CVES412965 COSY_0507COSY_0027COSY_0025COSY_0506COSY_0972COSY_0971COSY_0369COSY_0246COSY_0026
CSP78 CAUL_2797CAUL_2801CAUL_2799CAUL_2798CAUL_2803CAUL_2804CAUL_2805CAUL_3793CAUL_2802CAUL_2800
CSAL290398 CSAL_0571CSAL_0567CSAL_0569CSAL_0570CSAL_0565CSAL_0564CSAL_0563CSAL_0562CSAL_0566CSAL_0568
CRUT413404 RMAG_0553RMAG_0027RMAG_0025RMAG_0552RMAG_0262RMAG_1073RMAG_1072RMAG_0398RMAG_0261RMAG_0026
CPSY167879 CPS_1561CPS_1557CPS_1559CPS_1560CPS_1555CPS_1554CPS_1553CPS_1550CPS_1556CPS_1558
CJAP155077 CJA_1120CJA_1116CJA_1118CJA_1119CJA_1114CJA_1111CJA_1110CJA_1105CJA_1115CJA_1117
CBUR434922 COXBU7E912_0623COXBU7E912_0612COXBU7E912_1463COXBU7E912_0610COXBU7E912_0609COXBU7E912_0608COXBU7E912_0605COXBU7E912_0611COXBU7E912_0613
CBUR360115 COXBURSA331_A0724COXBURSA331_A1541COXBURSA331_A1534COXBURSA331_A1543COXBURSA331_A1544COXBURSA331_A1545COXBURSA331_A1548COXBURSA331_A1542COXBURSA331_A1540
CBUR227377 CBU_0611CBU_1382CBU_1376CBU_1384CBU_1385CBU_1386CBU_1388CBU_1383CBU_1381
CBLO291272 BPEN_287BPEN_284BPEN_283BPEN_286BPEN_281BPEN_280BPEN_279BPEN_278BPEN_282BPEN_285
CBLO203907 BFL279BFL276BFL275BFL278BFL273BFL272BFL271BFL270BFL274BFL277
CAULO CC1915CC1919CC1917CC1916CC1921CC1922CC1923CC2677CC1920CC1918
BVIE269482 BCEP1808_1917BCEP1808_1921BCEP1808_1919BCEP1808_1918BCEP1808_1923BCEP1808_1924BCEP1808_1925BCEP1808_1927BCEP1808_1922BCEP1808_1920
BTHA271848 BTH_I2035BTH_I2031BTH_I2033BTH_I2034BTH_I2029BTH_I2028BTH_I2027BTH_I2026BTH_I2030BTH_I2032
BSUB BSU16530BSU16550BSU16560BSU16510BSU16500BSU16490BSU01380BSU16520BSU16540
BSP376 BRADO4132BRADO4136BRADO4134BRADO4133BRADO4138BRADO4139BRADO4140BRADO0719BRADO4137BRADO4135
BSP36773 BCEP18194_A5321BCEP18194_A5325BCEP18194_A5323BCEP18194_A5322BCEP18194_A5327BCEP18194_A5328BCEP18194_A5329BCEP18194_A5330BCEP18194_A5326BCEP18194_A5324
BPSE320373 BURPS668_2428BURPS668_2433BURPS668_2431BURPS668_2429BURPS668_2435BURPS668_2436BURPS668_2437BURPS668_2438BURPS668_2434BURPS668_2432
BPSE320372 BURPS1710B_A2797BURPS1710B_A2802BURPS1710B_A2800BURPS1710B_A2798BURPS1710B_A2804BURPS1710B_A2805BURPS1710B_A2806BURPS1710B_A2808BURPS1710B_A2803BURPS1710B_A2801
BPSE272560 BPSL2151BPSL2155BPSL2153BPSL2152BPSL2157BPSL2158BPSL2159BPSL2160BPSL2156BPSL2154
BPET94624 BPET2527BPET2531BPET2529BPET2528BPET2533BPET2534BPET2535BPET2536BPET2532BPET2530
BPER257313 BP1427BP1423BP1425BP1426BP1421BP1420BP1419BP1418BP1422
BPAR257311 BPP1535BPP1531BPP1533BPP1534BPP1529BPP1528BPP1527BPP1526BPP1530
BMAL320389 BMA10247_1319BMA10247_1324BMA10247_1322BMA10247_1320BMA10247_1326BMA10247_1327BMA10247_1328BMA10247_1330BMA10247_1325BMA10247_1323
BMAL320388 BMASAVP1_A2047BMASAVP1_A2052BMASAVP1_A2050BMASAVP1_A2048BMASAVP1_A2054BMASAVP1_A2055BMASAVP1_A2056BMASAVP1_A2058BMASAVP1_A2053BMASAVP1_A2051
BMAL243160 BMA_1547BMA_1551BMA_1549BMA_1548BMA_1553BMA_1554BMA_1555BMA_1556BMA_1552BMA_1550
BLIC279010 BL01239BL01237BL01236BL01242BL01243BL01244BL01029BL01240BL01238
BJAP224911 BLL4853BLL4857BLL4855BLL4854BLL4859BLL4861BLR8170BLL4858BLL4856
BCLA66692 ABC2238ABC2236ABC2235ABC2240ABC2241ABC2242ABC0172ABC2239ABC2237
BCIC186490 BCI_0535BCI_0532BCI_0531BCI_0534BCI_0529BCI_0528BCI_0527BCI_0526BCI_0530BCI_0533
BCEN331272 BCEN2424_2011BCEN2424_2015BCEN2424_2013BCEN2424_2012BCEN2424_2017BCEN2424_2018BCEN2424_2019BCEN2424_2020BCEN2424_2016BCEN2424_2014
BCEN331271 BCEN_6066BCEN_6062BCEN_6064BCEN_6065BCEN_6060BCEN_6059BCEN_6058BCEN_6057BCEN_6061BCEN_6063
BBRO257310 BB2613BB2609BB2611BB2612BB2607BB2606BB2605BB2604BB2608
BAMY326423 RBAM_016370RBAM_016390RBAM_016400RBAM_016350RBAM_016340RBAM_016330RBAM_001630RBAM_016360RBAM_016380
BAMB398577 BAMMC406_1913BAMMC406_1917BAMMC406_1915BAMMC406_1914BAMMC406_1919BAMMC406_1920BAMMC406_1921BAMMC406_1922BAMMC406_1918BAMMC406_1916
BAMB339670 BAMB_2044BAMB_2048BAMB_2046BAMB_2045BAMB_2050BAMB_2051BAMB_2052BAMB_2053BAMB_2049BAMB_2047
ASP76114 EBA5996EBA5991EBA5994EBA5995EBA5988EBA5987EBA5986EBA5984EBA5990EBA5992
ASP62977 ACIAD1378ACIAD1374ACIAD1376ACIAD1377ACIAD1372ACIAD2268ACIAD2269ACIAD2271ACIAD1373ACIAD1375
ASP62928 AZO1901AZO1905AZO1903AZO1902AZO1907AZO1908AZO1909AZO1910AZO1906AZO1904
ASP232721 AJS_2577AJS_2581AJS_2579AJS_2578AJS_2583AJS_2584AJS_2585AJS_2293AJS_2582AJS_2580
ASAL382245 ASA_3152ASA_3156ASA_3154ASA_3153ASA_3158ASA_3159ASA_3160ASA_3162ASA_3157ASA_3155
APLE434271 APJL_0435APJL_0438APJL_0428APJL_0436APJL_0562APJL_0560APJL_0559APJL_2080APJL_0563APJL_0437
APLE416269 APL_0411APL_0414APL_0406APL_0412APL_0569APL_0567APL_0566APL_2030APL_0570APL_0413
AHYD196024 AHA_1181AHA_1177AHA_1179AHA_1180AHA_1175AHA_1174AHA_1173AHA_1172AHA_1176AHA_1178
AFER243159 AFE_1632AFE_1636AFE_1634AFE_1633AFE_1638AFE_1639AFE_1640AFE_2121AFE_1637AFE_1635
AEHR187272 MLG_1855MLG_1859MLG_1857MLG_1856MLG_1861MLG_1862MLG_1863MLG_1864MLG_1860MLG_1858
ADEH290397 ADEH_1081ADEH_3585ADEH_3583ADEH_3582ADEH_0280ADEH_0273ADEH_1924ADEH_0281ADEH_3584
ACRY349163 ACRY_2444ACRY_2555ACRY_2557ACRY_2558ACRY_2553ACRY_1695ACRY_1694ACRY_1492ACRY_2554ACRY_2556
ACAU438753 AZC_1701AZC_1697AZC_1699AZC_1700AZC_1695AZC_1693AZC_4203AZC_1696AZC_1698
ABOR393595 ABO_1151ABO_1147ABO_1149ABO_1150ABO_1145ABO_1144ABO_1143ABO_1142ABO_1146ABO_1148
ABAU360910 BAV1742BAV1738BAV1740BAV1741BAV1736BAV1735BAV1734BAV1733BAV1737BAV1739
AAVE397945 AAVE_1831AAVE_1827AAVE_1829AAVE_1830AAVE_1825AAVE_1824AAVE_1823AAVE_3100AAVE_1826


Organism features enriched in list (features available for 199 out of the 211 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00002281592
Disease:Bubonic_plague 0.001504166
Disease:Dysentery 0.001504166
Disease:Gastroenteritis 0.0079365913
Endospores:No 6.807e-1334211
Endospores:Yes 0.0002352753
GC_Content_Range4:0-40 3.982e-2816213
GC_Content_Range4:40-60 1.301e-10112224
GC_Content_Range4:60-100 8.461e-671145
GC_Content_Range7:0-30 3.979e-7247
GC_Content_Range7:30-40 6.247e-1914166
GC_Content_Range7:50-60 3.791e-963107
GC_Content_Range7:60-70 4.067e-770134
Genome_Size_Range5:0-2 1.725e-219155
Genome_Size_Range5:2-4 0.000771051197
Genome_Size_Range5:4-6 5.645e-20112184
Genome_Size_Range5:6-10 0.00036752747
Genome_Size_Range9:0-1 0.0045062327
Genome_Size_Range9:1-2 8.472e-196128
Genome_Size_Range9:2-3 0.002860129120
Genome_Size_Range9:4-5 5.030e-95896
Genome_Size_Range9:5-6 9.240e-95488
Genome_Size_Range9:6-8 0.00002942538
Gram_Stain:Gram_Neg 7.696e-30175333
Gram_Stain:Gram_Pos 8.045e-246150
Habitat:Specialized 0.0021513953
Motility:No 2.060e-1317151
Motility:Yes 1.707e-11129267
Optimal_temp.:25-30 0.00005601519
Optimal_temp.:35-37 6.547e-71313
Optimal_temp.:37 0.006086526106
Oxygen_Req:Anaerobic 1.918e-127102
Oxygen_Req:Facultative 1.156e-797201
Pathogenic_in:No 0.004415764226
Pathogenic_in:Plant 0.00167761115
Shape:Coccobacillus 0.0082201811
Shape:Coccus 2.328e-7982
Shape:Rod 5.137e-15161347
Shape:Spiral 0.0018485434
Temp._range:Mesophilic 0.0007813175473
Temp._range:Psychrophilic 0.001008089
Temp._range:Thermophilic 0.0003030335



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 79
Effective number of orgs (counting one per cluster within 468 clusters): 74

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
PTOR263820 ncbi Picrophilus torridus DSM 97900
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CFEL264202 ncbi Chlamydophila felis Fe/C-561
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1351
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  G6093   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10570   EG10335   EG10139   
UURE95667 UU514
UURE95664 UUR10_0597
UPAR505682 UPA3_0545
UMET351160
TVOL273116
TPEN368408
TPAL243276 TP_0326
TMAR243274 TM_1398
TLET416591 TLET_1793
TKOD69014
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
PTOR263820
PISL384616
PHOR70601
PFUR186497
PAST100379 PAM166
PARS340102
PAER178306
PABY272844
NPHA348780
MTHE349307
MTHE187420
MSYN262723 MS53_0414
MSTA339860
MSED399549
MPUL272635 MYPU_5320
MPNE272634
MPEN272633 MYPE9580
MMYC272632 MSC_0607
MMOB267748 MMOB1770
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP059
MHYO262722 MHP7448_0056
MHYO262719 MHJ_0052
MHUN323259
MGEN243273
MFLO265311 MFL560
MCAP340047 MCAP_0372
MBUR259564
MBAR269797
MART243272 MART0052
MAEO419665
MACE188937
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
FSP1855 FRANEAN1_1168
FSP106370 FRANCCI3_3575
CSUL444179
CMET456442
CMAQ397948
CKOR374847
CFEL264202 CF0566
BXEN266265 BXE_B0269
BTUR314724 BT0795
BHER314723 BH0795
BGAR290434 BG0821
BBUR224326 BB_0795
BAFZ390236 BAPKO_0848
AYEL322098 AYWB_553
AURANTIMONAS
APER272557
AFUL224325


Organism features enriched in list (features available for 74 out of the 79 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.002209559
Arrangment:Chains 0.0007709392
Arrangment:Pairs 0.00812667112
Arrangment:Singles 0.000116551286
Endospores:No 2.339e-1659211
GC_Content_Range4:0-40 0.004043837213
GC_Content_Range4:60-100 0.00225269145
GC_Content_Range7:0-30 5.801e-82047
GC_Content_Range7:60-70 0.00257028134
Genome_Size_Range5:0-2 8.620e-1448155
Genome_Size_Range5:4-6 5.055e-85184
Genome_Size_Range5:6-10 0.0095686147
Genome_Size_Range9:0-1 3.826e-91627
Genome_Size_Range9:1-2 5.927e-632128
Genome_Size_Range9:4-5 0.0004686396
Genome_Size_Range9:5-6 0.0002576288
Gram_Stain:Gram_Neg 2.532e-722333
Gram_Stain:Gram_Pos 1.429e-91150
Habitat:Aquatic 0.00122412191
Habitat:Multiple 1.321e-75178
Habitat:Specialized 1.128e-72153
Optimal_temp.:- 0.000596720257
Optimal_temp.:100 0.001973033
Optimal_temp.:35-40 0.001973033
Optimal_temp.:85 0.000241544
Oxygen_Req:Aerobic 0.003807814185
Oxygen_Req:Anaerobic 5.377e-1034102
Pathogenic_in:Human 0.000029012213
Pathogenic_in:No 0.000819941226
Salinity:Extreme_halophilic 0.000475457
Salinity:Moderate_halophilic 0.0094508512
Shape:Irregular_coccus 1.022e-121517
Shape:Rod 2.260e-1414347
Shape:Sphere 6.813e-131619
Temp._range:Hyperthermophilic 5.826e-151923
Temp._range:Mesophilic 1.177e-742473
Temp._range:Thermophilic 0.00551531035



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 49
Effective number of orgs (counting one per cluster within 468 clusters): 39

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CBLO203907 ncbi Candidatus Blochmannia floridanus 1.304e-665610
BCIC186490 Candidatus Baumannia cicadellinicola 1.739e-667510
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN 2.234e-669210
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 5.368e-675510
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00021227329
GOXY290633 ncbi Gluconobacter oxydans 621H 0.0003286113710
XFAS405440 ncbi Xylella fastidiosa M12 0.0004650117710
XFAS183190 ncbi Xylella fastidiosa Temecula1 0.0005148118910
NGON242231 ncbi Neisseria gonorrhoeae FA 1090 0.0005192119010
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas 0.00059413577
XFAS160492 ncbi Xylella fastidiosa 9a5c 0.0006450121610
NMEN374833 ncbi Neisseria meningitidis 053442 0.0006503121710
NMEN122586 ncbi Neisseria meningitidis MC58 0.0007118122810
NMEN272831 ncbi Neisseria meningitidis FAM18 0.0007536123510
MMAR394221 ncbi Maricaulis maris MCS10 0.0007976124210
NMEN122587 ncbi Neisseria meningitidis Z2491 0.0008438124910
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.0012512129910
NEUR228410 ncbi Nitrosomonas europaea ATCC 19718 0.0012904130310
NEUT335283 ncbi Nitrosomonas eutropha C91 0.0013513130910
PARC259536 ncbi Psychrobacter arcticus 273-4 0.0013827131210
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00144376218
NHAM323097 ncbi Nitrobacter hamburgensis X14 0.0016963133910
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00180416398
HDUC233412 ncbi Haemophilus ducreyi 35000HP 0.0019252135610
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.00212169499
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.0021656137210
NMUL323848 ncbi Nitrosospira multiformis ATCC 25196 0.0022791137910
HHAL349124 ncbi Halorhodospira halophila SL1 0.0022957138010
CBUR360115 ncbi Coxiella burnetii RSA 331 0.00327979979
SSP1131 Synechococcus sp. CC9605 0.00366707008
CBUR227377 ncbi Coxiella burnetii RSA 493 0.003708810119
PCRY335284 ncbi Psychrobacter cryohalolentis K5 0.0040683146110
CAULO ncbi Caulobacter crescentus CB15 0.0040963146210
PSP56811 Psychrobacter sp. 0.0048886148810
DSHI398580 ncbi Dinoroseobacter shibae DFL 12 0.0049217148910
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-111 0.005308410539
HINF374930 ncbi Haemophilus influenzae PittEE 0.0053343150110
MFLA265072 ncbi Methylobacillus flagellatus KT 0.0053701150210
TDEN292415 ncbi Thiobacillus denitrificans ATCC 25259 0.0055152150610
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0056264150910
HSOM205914 ncbi Haemophilus somnus 129PT 0.0063787152810
ACRY349163 ncbi Acidiphilium cryptum JF-5 0.0065482153210
HSOM228400 ncbi Haemophilus somnus 2336 0.0082659156810
HINF281310 ncbi Haemophilus influenzae 86-028NP 0.0088662157910
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden 0.00904233376
ABOR393595 ncbi Alcanivorax borkumensis SK2 0.0095055159010
ERUM302409 ncbi Ehrlichia ruminantium Gardel 0.00952063406
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-1 0.0096869159310
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00982005397


Names of the homologs of the genes in the group in each of these orgs
  G6093   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10570   EG10335   EG10139   
CBLO203907 BFL279BFL276BFL275BFL278BFL273BFL272BFL271BFL270BFL274BFL277
BCIC186490 BCI_0535BCI_0532BCI_0531BCI_0534BCI_0529BCI_0528BCI_0527BCI_0526BCI_0530BCI_0533
CBLO291272 BPEN_287BPEN_284BPEN_283BPEN_286BPEN_281BPEN_280BPEN_279BPEN_278BPEN_282BPEN_285
CRUT413404 RMAG_0553RMAG_0027RMAG_0025RMAG_0552RMAG_0262RMAG_1073RMAG_1072RMAG_0398RMAG_0261RMAG_0026
CVES412965 COSY_0507COSY_0027COSY_0025COSY_0506COSY_0972COSY_0971COSY_0369COSY_0246COSY_0026
GOXY290633 GOX1818GOX1814GOX1816GOX1817GOX1812GOX0074GOX0075GOX0606GOX1813GOX1815
XFAS405440 XFASM12_0357XFASM12_0361XFASM12_0359XFASM12_0358XFASM12_0368XFASM12_2150XFASM12_2151XFASM12_0091XFASM12_0362XFASM12_0360
XFAS183190 PD_0326PD_0330PD_0328PD_0327PD_0337PD_1959PD_1960PD_0085PD_0331PD_0329
NGON242231 NGO1801NGO1797NGO1799NGO1800NGO1973NGO1974NGO1975NGO1983NGO1796NGO1798
ECHA205920 ECH_1071ECH_0557ECH_1070ECH_0266ECH_0514ECH_1064ECH_0269
XFAS160492 XF1046XF1050XF1048XF1047XF1058XF2579XF2580XF0111XF1051XF1049
NMEN374833 NMCC_1970NMCC_1966NMCC_1968NMCC_1969NMCC_2067NMCC_2066NMCC_2065NMCC_2058NMCC_1965NMCC_1967
NMEN122586 NMB_0182NMB_0186NMB_0184NMB_0183NMB_2103NMB_2102NMB_2101NMB_2093NMB_0187NMB_0185
NMEN272831 NMC0173NMC0177NMC0175NMC0174NMC2082NMC2081NMC2080NMC2073NMC0178NMC0176
MMAR394221 MMAR10_1388MMAR10_1384MMAR10_1386MMAR10_1387MMAR10_1382MMAR10_1381MMAR10_1380MMAR10_1044MMAR10_1383MMAR10_1385
NMEN122587 NMA0085NMA0081NMA0083NMA0084NMA0326NMA0327NMA0328NMA0337NMA0080NMA0082
AFER243159 AFE_1632AFE_1636AFE_1634AFE_1633AFE_1638AFE_1639AFE_1640AFE_2121AFE_1637AFE_1635
NEUR228410 NE1710NE1714NE1712NE1711NE1716NE1717NE1718NE0275NE1715NE1713
NEUT335283 NEUT_2027NEUT_2031NEUT_2029NEUT_2028NEUT_2033NEUT_2034NEUT_2035NEUT_0307NEUT_2032NEUT_2030
PARC259536 PSYC_1529PSYC_1533PSYC_1531PSYC_1530PSYC_1535PSYC_0351PSYC_0350PSYC_0396PSYC_1534PSYC_1532
BAPH198804 BUSG231BUSG230BUSG229BUSG227BUSG226BUSG225BUSG224BUSG228
NHAM323097 NHAM_1702NHAM_1698NHAM_1700NHAM_1701NHAM_1696NHAM_1695NHAM_1694NHAM_0431NHAM_1697NHAM_1699
BSP107806 BU237BU236BU235BU233BU232BU231BU230BU234
HDUC233412 HD_1191HD_1196HD_1186HD_1192HD_1597HD_1599HD_1600HD_0248HD_1596HD_1193
DNOD246195 DNO_0681DNO_0719DNO_0716DNO_0721DNO_0722DNO_0723DNO_0724DNO_0720DNO_0718
NOCE323261 NOC_0816NOC_0812NOC_0814NOC_0815NOC_0810NOC_0809NOC_0808NOC_0807NOC_0811NOC_0813
NMUL323848 NMUL_A0665NMUL_A0661NMUL_A0663NMUL_A0664NMUL_A0659NMUL_A0658NMUL_A0657NMUL_A2632NMUL_A0660NMUL_A0662
HHAL349124 HHAL_1458HHAL_1462HHAL_1460HHAL_1459HHAL_1464HHAL_1465HHAL_1466HHAL_1467HHAL_1463HHAL_1461
CBUR360115 COXBURSA331_A0724COXBURSA331_A1541COXBURSA331_A1534COXBURSA331_A1543COXBURSA331_A1544COXBURSA331_A1545COXBURSA331_A1548COXBURSA331_A1542COXBURSA331_A1540
SSP1131 SYNCC9605_2119SYNCC9605_1631SYNCC9605_1970SYNCC9605_0572SYNCC9605_0711SYNCC9605_0645SYNCC9605_0710SYNCC9605_1623
CBUR227377 CBU_0611CBU_1382CBU_1376CBU_1384CBU_1385CBU_1386CBU_1388CBU_1383CBU_1381
PCRY335284 PCRYO_1708PCRYO_1712PCRYO_1710PCRYO_1709PCRYO_1714PCRYO_0390PCRYO_0389PCRYO_0442PCRYO_1713PCRYO_1711
CAULO CC1915CC1919CC1917CC1916CC1921CC1922CC1923CC2677CC1920CC1918
PSP56811 PSYCPRWF_1796PSYCPRWF_1800PSYCPRWF_1798PSYCPRWF_1797PSYCPRWF_1802PSYCPRWF_0559PSYCPRWF_0558PSYCPRWF_0557PSYCPRWF_1801PSYCPRWF_1799
DSHI398580 DSHI_1499DSHI_1495DSHI_1497DSHI_1498DSHI_1493DSHI_1549DSHI_1548DSHI_0117DSHI_1494DSHI_1496
CBUR434922 COXBU7E912_0623COXBU7E912_0612COXBU7E912_1463COXBU7E912_0610COXBU7E912_0609COXBU7E912_0608COXBU7E912_0605COXBU7E912_0611COXBU7E912_0613
HINF374930 CGSHIEE_07430CGSHIEE_07415CGSHIEE_08025CGSHIEE_07425CGSHIEE_06760CGSHIEE_07445CGSHIEE_07450CGSHIEE_03440CGSHIEE_08020CGSHIEE_07420
MFLA265072 MFLA_1522MFLA_1526MFLA_1524MFLA_1523MFLA_1528MFLA_1529MFLA_1530MFLA_1531MFLA_1527MFLA_1525
TDEN292415 TBD_0793TBD_0789TBD_0791TBD_0792TBD_0787TBD_0786TBD_0785TBD_0784TBD_0788TBD_0790
MCAP243233 MCA_2447MCA_0571MCA_0573MCA_0574MCA_0569MCA_0568MCA_0567MCA_0566MCA_0570MCA_0572
HSOM205914 HS_0980HS_0983HS_0985HS_0981HS_0987HS_1089HS_1088HS_0828HS_0986HS_0982
ACRY349163 ACRY_2444ACRY_2555ACRY_2557ACRY_2558ACRY_2553ACRY_1695ACRY_1694ACRY_1492ACRY_2554ACRY_2556
HSOM228400 HSM_1458HSM_1461HSM_1463HSM_1459HSM_1465HSM_1018HSM_1019HSM_1297HSM_1464HSM_1460
HINF281310 NTHI1084NTHI1088NTHI0971NTHI1085NTHI1225NTHI1081NTHI1080NTHI2027NTHI0972NTHI1087
ERUM254945 ERWE_CDS_08750ERWE_CDS_04970ERWE_CDS_08740ERWE_CDS_07620ERWE_CDS_05340ERWE_CDS_08640
ABOR393595 ABO_1151ABO_1147ABO_1149ABO_1150ABO_1145ABO_1144ABO_1143ABO_1142ABO_1146ABO_1148
ERUM302409 ERGA_CDS_08660ERGA_CDS_04870ERGA_CDS_08650ERGA_CDS_07540ERGA_CDS_05240ERGA_CDS_08550
AEHR187272 MLG_1855MLG_1859MLG_1857MLG_1856MLG_1861MLG_1862MLG_1863MLG_1864MLG_1860MLG_1858
PMAR59920 PMN2A_0656PMN2A_0751PMN2A_0808PMN2A_1854PMN2A_1809PMN2A_1853PMN2A_0664


Organism features enriched in list (features available for 46 out of the 49 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0024715192
Disease:Citrus_variegated_chlorosis 0.006100722
Disease:Meningitis_and_septicemia 0.000034344
Disease:Q_fever 0.006100722
Disease:and_reproductive_problems 0.006100722
Disease:arthritis 0.006100722
Disease:myocarditis 0.006100722
Endospores:No 1.536e-72211
Genome_Size_Range5:2-4 4.357e-630197
Genome_Size_Range5:4-6 3.068e-62184
Genome_Size_Range9:2-3 0.000041821120
Genome_Size_Range9:4-5 0.0084609296
Gram_Stain:Gram_Neg 0.000105138333
Motility:No 0.00189644151
Motility:Yes 0.005398313267
Optimal_temp.:26-28 0.006100722
Optimal_temp.:35-37 7.555e-7813
Shape:Coccobacillus 0.0066533411
Shape:Pleomorphic_coccus 0.006100722



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181710.6910
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001990.6611
GLYCOCAT-PWY (glycogen degradation I)2461780.6570
PWY-1269 (CMP-KDO biosynthesis I)3252010.6174
PWY-5918 (heme biosynthesis I)2721820.6146
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251620.6058
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911870.6012
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861850.5999
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951480.5994
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961880.5960
PWY-4041 (γ-glutamyl cycle)2791810.5900
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901840.5833
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831400.5810
AST-PWY (arginine degradation II (AST pathway))1201080.5793
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761360.5755
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482010.5679
PWY-5913 (TCA cycle variation IV)3011840.5569
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911400.5540
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391960.5529
GLUCONSUPER-PWY (D-gluconate degradation)2291550.5448
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491180.5370
PWY-5386 (methylglyoxal degradation I)3051820.5340
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491610.5309
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491610.5309
TYRFUMCAT-PWY (tyrosine degradation I)1841330.5255
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911360.5246
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291880.5202
DAPLYSINESYN-PWY (lysine biosynthesis I)3421900.5055
REDCITCYC (TCA cycle variation II)1741250.4995
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551580.4941
PWY-5148 (acyl-CoA hydrolysis)2271450.4801
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81750.4797
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982020.4745
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222080.4721
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261780.4590
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162030.4472
GALACTITOLCAT-PWY (galactitol degradation)73670.4458
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112880.4422
PWY-5028 (histidine degradation II)130970.4421
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561090.4397
P344-PWY (acrylonitrile degradation)2101320.4368
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96790.4367
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651870.4364
PWY-46 (putrescine biosynthesis III)1381000.4350
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135980.4304
PWY-5340 (sulfate activation for sulfonation)3851920.4300
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94770.4280
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138990.4268
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741880.4247
LIPASYN-PWY (phospholipases)2121310.4238
P601-PWY (D-camphor degradation)95770.4229
PWY-5194 (siroheme biosynthesis)3121680.4228
GLUCARDEG-PWY (D-glucarate degradation I)1521050.4227
PWY-561 (superpathway of glyoxylate cycle)1621090.4186
PWY-3162 (tryptophan degradation V (side chain pathway))94760.4185
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111670.4183
GLYOXYLATE-BYPASS (glyoxylate cycle)1691120.4177
PWY-5188 (tetrapyrrole biosynthesis I)4392040.4113
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001620.4100
1CMET2-PWY (formylTHF biosynthesis I)3691840.4074
PWY0-981 (taurine degradation IV)106810.4071
KDOSYN-PWY (KDO transfer to lipid IVA I)1801150.4043
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791140.4001



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10570   EG10335   EG10139   
G60930.9998880.9998740.9999540.9997990.99970.9997270.9993330.9997970.99982
G60920.9999640.9999690.9999490.99990.9999220.999440.9999770.999986
EG127150.9999790.9999150.9998450.9998730.9994280.9999470.999963
EG124360.9999190.999850.9998870.9993850.999930.999963
EG115390.9999570.9999660.9995770.9999960.999914
EG110330.9999930.9997090.9999490.999894
EG109010.9997130.9999490.999883
EG105700.9995850.999429
EG103350.999954
EG10139



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PAIRWISE BLAST SCORES:

  G6093   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10570   EG10335   EG10139   
G60930.0f0---------
G6092-0.0f0--------
EG12715--0.0f0-------
EG12436---0.0f0------
EG11539----0.0f0-----
EG11033-----0.0f0----
EG10901------0.0f0---
EG10570-------0.0f0--
EG10335--------0.0f0-
EG10139---------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10139 EG10335 EG10570 EG10901 EG11033 EG11539 EG12436 EG12715 G6092 G6093 (centered at EG12715)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6093   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10570   EG10335   EG10139   
353/623411/623401/623417/623413/623412/623415/623363/623414/623382/623
AAEO224324:0:Tyes410--88601----
AAUR290340:2:Tyes--39--0-2192-
AAVE397945:0:Tyes846721012573-
ABAC204669:0:Tyes011791181118211-320-13-
ABAU360910:0:Tyes9578321046
ABOR393595:0:Tyes9578321046
ABUT367737:0:Tyes10162005-676452348347-20790
ACAU438753:0:Tyes84672-0254335
ACEL351607:0:Tyes--0--1718-15-
ACRY349163:8:Tyes9651075107710781073207206010741076
ADEH290397:0:Tyes8143345334333427-0166983344
AEHR187272:0:Tyes0421678953
AFER243159:0:Tyes042167848753
AHYD196024:0:Tyes9578321046
ALAI441768:0:Tyes---1031-103910400--
AMAR234826:0:Tyes703-437-0-471695-3
AMAR329726:9:Tyes25396034684898---4899586
AMET293826:0:Tyes-20-567-41
ANAE240017:0:Tyes--225--231-0229228
AORE350688:0:Tyes-997999-9959949930996998
APHA212042:0:Tyes1034-312-0-2701025--
APLE416269:0:Tyes580616216015916631637
APLE434271:0:Tno580611811611516801197
ASAL382245:5:Tyes04216781053
ASP1667:3:Tyes--31--0-2252-
ASP232721:2:Tyes2862902882872922932940291289
ASP62928:0:Tyes0421678953
ASP62977:0:Tyes6245083283383413
ASP76114:2:Tyes10689432057
AVAR240292:3:Tyes-29067911110--127-1199
AYEL322098:4:Tyes-----0----
BABO262698:1:Tno04-26781265-
BAFZ390236:2:Fyes0---------
BAMB339670:3:Tno0421678953
BAMB398577:3:Tno0421678953
BAMY326423:0:Tyes-147014721473146814671466014691471
BANT260799:0:Tno-310567-42
BANT261594:2:Tno-310567-42
BANT568206:2:Tyes-467210-35
BANT592021:2:Tno-310567-42
BAPH198804:0:Tyes765-32104-
BAPH372461:0:Tyes5---32104-
BBAC264462:0:Tyes02130-21322128-2126-21292131
BBAC360095:0:Tyes5---21022534
BBRO257310:0:Tyes957832104-
BBUR224326:21:Fno0---------
BCAN483179:1:Tno03-15671324-
BCEN331271:0:Tno9578321046
BCEN331272:3:Tyes0421678953
BCER226900:1:Tyes-20-456-31
BCER288681:0:Tno-310567-42
BCER315749:1:Tyes-3210318323324325-322320
BCER405917:1:Tyes-310567-42
BCER572264:1:Tno-310567-42
BCIC186490:0:Tyes9658321047
BCLA66692:0:Tyes-210421022101210621072108021052103
BFRA272559:1:Tyes012976-169--2065-2878
BFRA295405:0:Tno013241-197--2082-3129
BGAR290434:2:Fyes0---------
BHAL272558:0:Tyes-310567-42
BHEN283166:0:Tyes6--52101953-
BHER314723:0:Fyes0---------
BJAP224911:0:Fyes04216-8334053
BLIC279010:0:Tyes-166816701671166616651664016671669
BLON206672:0:Tyes--0--1388--1390-
BMAL243160:1:Tno0421678953
BMAL320388:1:Tno05327891164
BMAL320389:1:Tyes05327891164
BMEL224914:1:Tno115112-1141101091080111-
BMEL359391:1:Tno04-26781165-
BOVI236:1:Tyes03-15671194-
BPAR257311:0:Tno957832104-
BPER257313:0:Tyes957832104-
BPET94624:0:Tyes0421678953
BPSE272560:1:Tyes0421678953
BPSE320372:1:Tno05327891164
BPSE320373:1:Tno05327891064
BPUM315750:0:Tyes-146114631464-1458-014601462
BQUI283165:0:Tyes64--65686970067-
BSP107806:2:Tyes765-32104-
BSP36773:2:Tyes0421678953
BSP376:0:Tyes3248325232503249325432553256032533251
BSUB:0:Tyes-163316351636163116301629016321634
BSUI204722:1:Tyes04-26781265-
BSUI470137:1:Tno03-15671304-
BTHA271848:1:Tno9578321046
BTHE226186:0:Tyes315131521401-1643--0-3903
BTHU281309:1:Tno-310567-42
BTHU412694:1:Tno-310567-42
BTRI382640:1:Tyes6--52102163-
BTUR314724:0:Fyes0---------
BVIE269482:7:Tyes04216781053
BWEI315730:4:Tyes-310567-42
BXEN266265:1:Tyes-------0--
CABO218497:0:Tyes--374--0----
CACE272562:1:Tyes--7810--2-
CAULO:0:Tyes042167878353
CBEI290402:0:Tyes-36710-236624
CBLO203907:0:Tyes9658321047
CBLO291272:0:Tno9658321047
CBOT36826:1:Tno-710----8-
CBOT441770:0:Tyes-610----7-
CBOT441771:0:Tno-610----7-
CBOT441772:1:Tno-610----7-
CBOT498213:1:Tno-610----7-
CBOT508765:1:Tyes-478210823-
CBOT515621:2:Tyes-510----6-
CBOT536232:0:Tno-610----7-
CBUR227377:1:Tyes0732-726734735736738733731
CBUR360115:1:Tno0756-749758759760762757755
CBUR434922:2:Tno176-819432057
CCAV227941:1:Tyes--393--0-700--
CCHL340177:0:Tyes464465011652-1654--1472
CCON360104:2:Tyes0---1053-1099-1464-
CCUR360105:0:Tyes1194---238-0---
CDES477974:0:Tyes-4910--0-3-
CDIF272563:1:Tyes-610-1011-8-
CDIP257309:0:Tyes--4--11-09-
CEFF196164:0:Fyes--4--13-098
CFEL264202:1:Tyes--0-------
CFET360106:0:Tyes274---0-218---
CGLU196627:0:Tyes--8--17-01514
CHOM360107:1:Tyes1517-0-1141-701---
CHUT269798:0:Tyes300330022591-2162631--2170
CHYD246194:0:Tyes-30-7-9-62
CJAP155077:0:Tyes1511131496501012
CJEI306537:0:Tyes-----15-01312
CJEJ192222:0:Tyes0--905111110171018--1185
CJEJ195099:0:Tno0--105112481154---1373
CJEJ354242:2:Tyes0--8841087993---1140
CJEJ360109:0:Tyes0--483284378---205
CJEJ407148:0:Tno0--91811281034---1175
CKLU431943:1:Tyes-1163116511661161-115901162-
CMIC31964:2:Tyes--1037--0----
CMIC443906:2:Tyes--799--0----
CMUR243161:1:Tyes--287--0----
CNOV386415:0:Tyes-3105674774-
CPEL335992:0:Tyes96--0---323--
CPER195102:1:Tyes-314312-3163173180315-
CPER195103:0:Tno-307305-3093103110308-
CPER289380:3:Tyes-2872852842892902910288-
CPHY357809:0:Tyes-310--598114-
CPNE115711:1:Tyes406-364--0----
CPNE115713:0:Tno0-40--399----
CPNE138677:0:Tno0-43--405----
CPNE182082:0:Tno0-41--422----
CPRO264201:0:Fyes1622-124-17800----
CPSY167879:0:Tyes117910543068
CRUT413404:0:Tyes497204962259899883502241
CSAL290398:0:Tyes9578321046
CSP501479:7:Fyes-------0--
CSP501479:8:Fyes23282625-10---
CSP78:2:Tyes0421678102653
CTEP194439:0:Tyes141142101630-1632-1431108
CTET212717:0:Tyes-478--0-3-
CTRA471472:0:Tyes--287--0----
CTRA471473:0:Tno--287--0----
CVES412965:0:Tyes46220461-9079063302121
CVIO243365:0:Tyes846721020235
DARO159087:0:Tyes10689432057
DDES207559:0:Tyes2534107-11-6-
DETH243164:0:Tyes-3105---42
DGEO319795:1:Tyes376----3-23610
DHAF138119:0:Tyes-30-5-7-42
DNOD246195:0:Tyes038-36404142433937
DOLE96561:0:Tyes2402-672-0174435
DPSY177439:2:Tyes0908910911906--2015907909
DRAD243230:3:Tyes-----196-0194193
DRED349161:0:Tyes-30-678-52
DSHI398580:5:Tyes1405140114031404139914551454014001402
DSP216389:0:Tyes-3105---42
DSP255470:0:Tno-3105---42
DVUL882:1:Tyes1498-0-578-4-
ECAN269484:0:Tyes393-0392289-45386--
ECAR218491:0:Tyes10769432058
ECHA205920:0:Tyes769-2827680-242762-3
ECOL199310:0:Tno96-8431057
ECOL316407:0:Tno10769432058
ECOL331111:6:Tno9658321047
ECOL362663:0:Tno9658321047
ECOL364106:1:Tno10769431058
ECOL405955:2:Tyes96583-1047
ECOL409438:6:Tyes9658321047
ECOL413997:0:Tno9658321047
ECOL439855:4:Tno10769431058
ECOL469008:0:Tno0341678952
ECOL481805:0:Tno03416781052
ECOL585034:0:Tno1287115430610
ECOL585035:0:Tno10769432058
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