CANDIDATE ID: 58

CANDIDATE ID: 58

NUMBER OF GENES: 9
AVERAGE SCORE:    9.9990767e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.8888889e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6728 (ynbB) (b1409)
   Products of gene:
     - G6728-MONOMER (predicted CDP-diglyceride synthase)

- G6092 (ispU) (b0174)
   Products of gene:
     - UPPSYN-MONOMER (subunit of undecaprenyl diphosphate synthase)
     - UPPSYN-CPLX (undecaprenyl diphosphate synthase)
       Reactions:
        (2E,6E)-farnesyl diphosphate + 8 isopentenyl diphosphate  ->  di-trans,poly-cis-undecaprenyl diphosphate + 8 diphosphate
         In pathways
         POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))
         PWY-5785 (di-trans,poly-cis-undecaprenyl phosphate biosynthesis)

- EG12715 (dxr) (b0173)
   Products of gene:
     - DXPREDISOM-MONOMER (Dxr)
     - DXPREDISOM-CPLX (1-deoxy-D-xylulose 5-phosphate reductoisomerase)
       Reactions:
        2-C-methyl-D-erythritol-4-phosphate + NADP+  =  1-deoxy-D-xylulose 5-phosphate + NADPH + H+
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG12436 (rseP) (b0176)
   Products of gene:
     - EG12436-MONOMER (RseP zinc protease)

- EG11539 (pyrH) (b0171)
   Products of gene:
     - UMPKI-MONOMER (PyrH)
     - UMPKI-CPLX (uridylate kinase)
       Reactions:
        ATP + uridine-5'-phosphate  =  ADP + UDP + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)
         PWY-5687 (pyrimidine ribonucleotides interconversion)
         P1-PWY (P1-PWY)

- EG11033 (tsf) (b0170)
   Products of gene:
     - EG11033-MONOMER (protein chain elongation factor EF-Ts)

- EG10901 (rpsB) (b0169)
   Products of gene:
     - EG10901-MONOMER (30S ribosomal subunit protein S2)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10335 (frr) (b0172)
   Products of gene:
     - EG10335-MONOMER (ribosome recycling factor)

- EG10139 (cdsA) (b0175)
   Products of gene:
     - CDPDIGLYSYN-MONOMER (CDP-diglyceride synthetase)
       Reactions:
        CTP + a 1,2-diacylglycerol-3-phosphate  ->  diphosphate + a CDP-diacylglycerol
         In pathways
         PHOSLIPSYN2-PWY (PHOSLIPSYN2-PWY)
         PWY4FS-8 (PWY4FS-8)
         PHOSLIPSYN-PWY (phospholipid biosynthesis I)
         PWY4FS-7 (PWY4FS-7)
         PWY-5667 (CDP-diacylglycerol biosynthesis I)
         PWY-5981 (PWY-5981)
         PWY0-1319 (CDP-diacylglycerol biosynthesis II)
        CTP + a 2,3,4-saturated L-phosphatidate  =  diphosphate + a CDP-2,3,4-saturated-diacylglycerol



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ORGANISMS CONTAINING AT LEAST 8 GENES FROM THE GROUP:

Total number of orgs: 240
Effective number of orgs (counting one per cluster within 468 clusters): 160

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317589
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329539
YPES386656 ncbi Yersinia pestis Pestoides F9
YPES377628 ncbi Yersinia pestis Nepal5169
YPES360102 ncbi Yersinia pestis Antiqua9
YPES349746 ncbi Yersinia pestis Angola9
YPES214092 ncbi Yersinia pestis CO929
YPES187410 ncbi Yersinia pestis KIM 109
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80819
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A8
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110188
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103318
XFAS405440 ncbi Xylella fastidiosa M128
XFAS183190 ncbi Xylella fastidiosa Temecula18
XFAS160492 ncbi Xylella fastidiosa 9a5c8
XCAM487884 Xanthomonas campestris pv. paulliniae9
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-109
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80049
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339139
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3069
VVUL216895 ncbi Vibrio vulnificus CMCP68
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106339
VFIS312309 ncbi Vibrio fischeri ES1149
VCHO345073 ncbi Vibrio cholerae O3959
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169619
TTUR377629 ncbi Teredinibacter turnerae T79018
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252599
TCRU317025 ncbi Thiomicrospira crunogena XCL-28
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen8
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT29
STHE322159 ncbi Streptococcus thermophilus LMD-98
STHE299768 ncbi Streptococcus thermophilus CNRZ10668
STHE292459 ncbi Symbiobacterium thermophilum IAM 148638
STHE264199 ncbi Streptococcus thermophilus LMG 183118
SSP94122 ncbi Shewanella sp. ANA-38
SSON300269 ncbi Shigella sonnei Ss0469
SSED425104 ncbi Shewanella sediminis HAW-EB39
SPYO370554 ncbi Streptococcus pyogenes MGAS107508
SPYO370552 ncbi Streptococcus pyogenes MGAS102708
SPYO319701 ncbi Streptococcus pyogenes MGAS61808
SPYO286636 ncbi Streptococcus pyogenes MGAS103948
SPYO198466 ncbi Streptococcus pyogenes MGAS3158
SPYO186103 ncbi Streptococcus pyogenes MGAS82328
SPYO160490 ncbi Streptococcus pyogenes M1 GAS8
SPRO399741 ncbi Serratia proteamaculans 5689
SPEA398579 ncbi Shewanella pealeana ATCC 7003459
SONE211586 ncbi Shewanella oneidensis MR-19
SMUT210007 ncbi Streptococcus mutans UA1598
SMEL266834 ncbi Sinorhizobium meliloti 10219
SMED366394 ncbi Sinorhizobium medicae WSM4199
SLOI323850 ncbi Shewanella loihica PV-49
SHIGELLA ncbi Shigella flexneri 2a str. 2457T9
SHAL458817 ncbi Shewanella halifaxensis HAW-EB49
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14358
SGLO343509 ncbi Sodalis glossinidius morsitans9
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB8
SFLE373384 ncbi Shigella flexneri 5 str. 84019
SFLE198214 ncbi Shigella flexneri 2a str. 3019
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4769
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B679
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91509
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT189
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty29
SDYS300267 ncbi Shigella dysenteriae Sd1979
SDEN318161 ncbi Shewanella denitrificans OS2179
SDEG203122 ncbi Saccharophagus degradans 2-409
SBOY300268 ncbi Shigella boydii Sb2279
SBAL402882 ncbi Shewanella baltica OS1859
SBAL399599 ncbi Shewanella baltica OS1959
RSOL267608 ncbi Ralstonia solanacearum GMI10008
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111708
RMET266264 ncbi Ralstonia metallidurans CH348
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38418
RFER338969 ncbi Rhodoferax ferrireducens T1188
REUT381666 ncbi Ralstonia eutropha H169
REUT264198 ncbi Ralstonia eutropha JMP1349
PTHE370438 ncbi Pelotomaculum thermopropionicum SI8
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30009
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a9
PSTU379731 ncbi Pseudomonas stutzeri A15019
PSP56811 Psychrobacter sp.9
PSP296591 ncbi Polaromonas sp. JS6669
PPUT76869 ncbi Pseudomonas putida GB-19
PPUT351746 ncbi Pseudomonas putida F19
PPUT160488 ncbi Pseudomonas putida KT24409
PPRO298386 ncbi Photobacterium profundum SS98
PNAP365044 ncbi Polaromonas naphthalenivorans CJ28
PMUL272843 ncbi Pasteurella multocida multocida Pm709
PMEN399739 ncbi Pseudomonas mendocina ymp9
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO19
PING357804 ncbi Psychromonas ingrahamii 379
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1259
PFLU220664 ncbi Pseudomonas fluorescens Pf-59
PFLU216595 ncbi Pseudomonas fluorescens SBW259
PFLU205922 ncbi Pseudomonas fluorescens Pf0-19
PENT384676 ncbi Pseudomonas entomophila L489
PCRY335284 ncbi Psychrobacter cryohalolentis K59
PCAR338963 ncbi Pelobacter carbinolicus DSM 23808
PATL342610 ncbi Pseudoalteromonas atlantica T6c9
PARC259536 ncbi Psychrobacter arcticus 273-49
PAER208964 ncbi Pseudomonas aeruginosa PAO19
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA149
OANT439375 ncbi Ochrobactrum anthropi ATCC 491888
NOCE323261 ncbi Nitrosococcus oceani ATCC 197079
NMUL323848 ncbi Nitrosospira multiformis ATCC 251969
NMEN374833 ncbi Neisseria meningitidis 0534429
NMEN272831 ncbi Neisseria meningitidis FAM189
NMEN122587 ncbi Neisseria meningitidis Z24919
NMEN122586 ncbi Neisseria meningitidis MC589
NHAM323097 ncbi Nitrobacter hamburgensis X148
NGON242231 ncbi Neisseria gonorrhoeae FA 10909
NEUT335283 ncbi Nitrosomonas eutropha C918
NEUR228410 ncbi Nitrosomonas europaea ATCC 197188
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E9
MSP400668 ncbi Marinomonas sp. MWYL18
MPET420662 ncbi Methylibium petroleiphilum PM19
MMAR394221 ncbi Maricaulis maris MCS108
MFLA265072 ncbi Methylobacillus flagellatus KT9
MCAP243233 ncbi Methylococcus capsulatus Bath9
MAQU351348 ncbi Marinobacter aquaeolei VT89
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53348
LPNE400673 ncbi Legionella pneumophila Corby8
LPNE297246 ncbi Legionella pneumophila Paris8
LPNE297245 ncbi Legionella pneumophila Lens8
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 18
LMON265669 ncbi Listeria monocytogenes 4b F23659
LMON169963 ncbi Listeria monocytogenes EGD-e9
LINN272626 ncbi Listeria innocua Clip112629
LCHO395495 ncbi Leptothrix cholodnii SP-68
LCAS321967 ncbi Lactobacillus casei ATCC 3348
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785789
JSP375286 ncbi Janthinobacterium sp. Marseille8
ILOI283942 ncbi Idiomarina loihiensis L2TR9
HSOM228400 ncbi Haemophilus somnus 23369
HSOM205914 ncbi Haemophilus somnus 129PT9
HINF71421 ncbi Haemophilus influenzae Rd KW209
HINF374930 ncbi Haemophilus influenzae PittEE9
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HHAL349124 ncbi Halorhodospira halophila SL18
HDUC233412 ncbi Haemophilus ducreyi 35000HP9
HCHE349521 ncbi Hahella chejuensis KCTC 23969
HARS204773 ncbi Herminiimonas arsenicoxydans8
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-29
GOXY290633 ncbi Gluconobacter oxydans 621H8
GKAU235909 ncbi Geobacillus kaustophilus HTA4269
GBET391165 ncbi Granulibacter bethesdensis CGDNIH18
ESP42895 Enterobacter sp.9
EFER585054 ncbi Escherichia fergusonii ATCC 354699
EFAE226185 ncbi Enterococcus faecalis V5838
ECOO157 ncbi Escherichia coli O157:H7 EDL9339
ECOL83334 Escherichia coli O157:H79
ECOL585397 ncbi Escherichia coli ED1a9
ECOL585057 ncbi Escherichia coli IAI399
ECOL585056 ncbi Escherichia coli UMN0269
ECOL585055 ncbi Escherichia coli 559899
ECOL585035 ncbi Escherichia coli S889
ECOL585034 ncbi Escherichia coli IAI19
ECOL481805 ncbi Escherichia coli ATCC 87399
ECOL469008 ncbi Escherichia coli BL21(DE3)9
ECOL439855 ncbi Escherichia coli SMS-3-59
ECOL413997 ncbi Escherichia coli B str. REL6069
ECOL409438 ncbi Escherichia coli SE119
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI899
ECOL362663 ncbi Escherichia coli 5369
ECOL331111 ncbi Escherichia coli E24377A9
ECOL316407 ncbi Escherichia coli K-12 substr. W31109
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10439
DSHI398580 ncbi Dinoroseobacter shibae DFL 129
DRED349161 ncbi Desulfotomaculum reducens MI-18
DARO159087 ncbi Dechloromonas aromatica RCB9
CVIO243365 ncbi Chromobacterium violaceum ATCC 124729
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA8
CSP78 Caulobacter sp.8
CSAL290398 ncbi Chromohalobacter salexigens DSM 30438
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)9
CPSY167879 ncbi Colwellia psychrerythraea 34H9
CPER289380 ncbi Clostridium perfringens SM1018
CNOV386415 ncbi Clostridium novyi NT8
CJAP155077 Cellvibrio japonicus9
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1118
CBUR360115 ncbi Coxiella burnetii RSA 3318
CBUR227377 ncbi Coxiella burnetii RSA 4938
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B8
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN9
CBLO203907 ncbi Candidatus Blochmannia floridanus9
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80528
CAULO ncbi Caulobacter crescentus CB158
BWEI315730 ncbi Bacillus weihenstephanensis KBAB49
BVIE269482 ncbi Burkholderia vietnamiensis G49
BTHU412694 ncbi Bacillus thuringiensis Al Hakam9
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-279
BTHA271848 ncbi Burkholderia thailandensis E2648
BSUB ncbi Bacillus subtilis subtilis 1689
BSP376 Bradyrhizobium sp.8
BSP36773 Burkholderia sp.9
BPSE320373 ncbi Burkholderia pseudomallei 6688
BPSE320372 ncbi Burkholderia pseudomallei 1710b8
BPSE272560 ncbi Burkholderia pseudomallei K962438
BPET94624 Bordetella petrii8
BMAL320389 ncbi Burkholderia mallei NCTC 102478
BMAL320388 ncbi Burkholderia mallei SAVP18
BMAL243160 ncbi Burkholderia mallei ATCC 233448
BLIC279010 ncbi Bacillus licheniformis ATCC 145809
BHAL272558 ncbi Bacillus halodurans C-1259
BCLA66692 ncbi Bacillus clausii KSM-K169
BCIC186490 Candidatus Baumannia cicadellinicola9
BCER572264 ncbi Bacillus cereus 03BB1029
BCER405917 Bacillus cereus W9
BCER315749 ncbi Bacillus cytotoxicus NVH 391-989
BCER288681 ncbi Bacillus cereus E33L9
BCER226900 ncbi Bacillus cereus ATCC 145798
BCEN331272 ncbi Burkholderia cenocepacia HI24249
BCEN331271 ncbi Burkholderia cenocepacia AU 10549
BANT592021 ncbi Bacillus anthracis A02489
BANT568206 ncbi Bacillus anthracis CDC 6849
BANT261594 ncbi Bacillus anthracis Ames Ancestor9
BANT260799 ncbi Bacillus anthracis Sterne9
BAMY326423 ncbi Bacillus amyloliquefaciens FZB429
BAMB398577 ncbi Burkholderia ambifaria MC40-69
BAMB339670 ncbi Burkholderia ambifaria AMMD9
ASP76114 ncbi Aromatoleum aromaticum EbN19
ASP62977 ncbi Acinetobacter sp. ADP19
ASP62928 ncbi Azoarcus sp. BH729
ASP232721 ncbi Acidovorax sp. JS428
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4499
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL038
APLE416269 ncbi Actinobacillus pleuropneumoniae L208
AORE350688 ncbi Alkaliphilus oremlandii OhILAs8
AMET293826 ncbi Alkaliphilus metalliredigens QYMF8
AHYD196024 Aeromonas hydrophila dhakensis9
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232709
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-19
ACRY349163 ncbi Acidiphilium cryptum JF-58
ABUT367737 ncbi Arcobacter butzleri RM40188
ABOR393595 ncbi Alcanivorax borkumensis SK29
ABAU360910 ncbi Bordetella avium 197N8
AAVE397945 ncbi Acidovorax citrulli AAC00-18


Names of the homologs of the genes in the group in each of these orgs
  G6728   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10335   EG10139   
YPSE349747 YPSIP31758_3005YPSIP31758_1018YPSIP31758_1017YPSIP31758_1020YPSIP31758_1015YPSIP31758_1014YPSIP31758_1013YPSIP31758_1016YPSIP31758_1019
YPSE273123 YPTB1045YPTB2998YPTB2999YPTB2996YPTB3001YPTB3002YPTB3003YPTB3000YPTB2997
YPES386656 YPDSF_2704YPDSF_1663YPDSF_1664YPDSF_1661YPDSF_1666YPDSF_1668YPDSF_1669YPDSF_1665YPDSF_1662
YPES377628 YPN_1025YPN_2951YPN_2952YPN_2949YPN_2954YPN_2956YPN_2957YPN_2953YPN_2950
YPES360102 YPA_2561YPA_0525YPA_0524YPA_0527YPA_0522YPA_0520YPA_0518YPA_0523YPA_0526
YPES349746 YPANGOLA_A1288YPANGOLA_A3430YPANGOLA_A3431YPANGOLA_A3428YPANGOLA_A3433YPANGOLA_A3434YPANGOLA_A3435YPANGOLA_A3432YPANGOLA_A3429
YPES214092 YPO2816YPO1049YPO1048YPO1051YPO1046YPO1045YPO1044YPO1047YPO1050
YPES187410 Y1116Y3130Y3131Y3128Y3134Y3135Y3137Y3133Y3129
YENT393305 YE3278YE3279YE3280YE3277YE3282YE3283YE3284YE3281YE3278
XORY360094 XOOORF_3030XOOORF_3032XOOORF_3033XOOORF_3028XOOORF_3026XOOORF_3025XOOORF_3029XOOORF_3031
XORY342109 XOO1862XOO1860XOO1859XOO1864XOO1866XOO1867XOO1863XOO1861
XORY291331 XOO1972XOO1970XOO1969XOO1974XOO1976XOO1977XOO1973XOO1971
XFAS405440 XFASM12_0361XFASM12_0359XFASM12_0358XFASM12_0368XFASM12_2150XFASM12_2151XFASM12_0362XFASM12_0360
XFAS183190 PD_0330PD_0328PD_0327PD_0337PD_1959PD_1960PD_0331PD_0329
XFAS160492 XF1050XF1048XF1047XF1058XF2579XF2580XF1051XF1049
XCAM487884 XCC-B100_0536XCC-B100_2927XCC-B100_2929XCC-B100_2930XCC-B100_2925XCC-B100_2923XCC-B100_2922XCC-B100_2926XCC-B100_2928
XCAM316273 XCAORF_4001XCAORF_1636XCAORF_1634XCAORF_1633XCAORF_1638XCAORF_1641XCAORF_1642XCAORF_1637XCAORF_1635
XCAM314565 XC_0518XC_2869XC_2871XC_2872XC_2867XC_2864XC_2863XC_2868XC_2870
XCAM190485 XCC0506XCC1369XCC1367XCC1366XCC1371XCC1374XCC1375XCC1370XCC1368
XAXO190486 XAC0521XAC1417XAC1415XAC1414XAC1419XAC1421XAC1422XAC1418XAC1416
VVUL216895 VV1_1865VV1_1864VV1_1866VV1_1867VV1_1861VV1_1860VV1_1859VV1_1865
VVUL196600 VV2552VV2553VV2551VV2550VV2555VV2556VV2557VV2554VV2552
VPAR223926 VP2313VP2314VP2312VP2311VP2316VP2317VP2318VP2315VP2313
VFIS312309 VF1957VF1958VF1956VF1955VF1960VF1961VF1962VF1959VF1957
VCHO345073 VC0395_A1525VC0395_A1847VC0395_A1845VC0395_A1844VC0395_A1849VC0395_A1850VC0395_A1851VC0395_A1848VC0395_A1846
VCHO VC1936VC2256VC2254VC2253VC2258VC2259VC2260VC2257VC2255
TTUR377629 TERTU_1010TERTU_1009TERTU_1011TERTU_1007TERTU_1006TERTU_1005TERTU_1008TERTU_1010
TDEN292415 TBD_0790TBD_0789TBD_0791TBD_0792TBD_0787TBD_0786TBD_0785TBD_0788TBD_0790
TCRU317025 TCR_1280TCR_1281TCR_1279TCR_1283TCR_1284TCR_1285TCR_1282TCR_1280
SWOL335541 SWOL_0887SWOL_0886SWOL_0889SWOL_0890SWOL_0884SWOL_0882SWOL_0885SWOL_0887
STYP99287 STM0222STM0221STM0220STM0223STM0218STM0217STM0216STM0219STM0222
STHE322159 STER_0245STER_0244STER_0246STER_0474STER_0106STER_0105STER_0475STER_0245
STHE299768 STR0198STR0197STR0199STR0438STR0074STR0073STR0439STR0198
STHE292459 STH1497STH1496STH1499STH1500STH1492STH1491STH1494STH1497
STHE264199 STU0198STU0197STU0199STU0438STU0074STU0073STU0439STU0198
SSP94122 SHEWANA3_2811SHEWANA3_2809SHEWANA3_2808SHEWANA3_2813SHEWANA3_2814SHEWANA3_2815SHEWANA3_2812SHEWANA3_2810
SSON300269 SSO_0187SSO_0186SSO_0185SSO_0188SSO_0183SSO_0182SSO_0181SSO_0184SSO_0187
SSED425104 SSED_3156SSED_3157SSED_3155SSED_3154SSED_3159SSED_3160SSED_3161SSED_3158SSED_3156
SPYO370554 MGAS10750_SPY1769MGAS10750_SPY1770MGAS10750_SPY1768MGAS10750_SPY0378MGAS10750_SPY1873MGAS10750_SPY1872MGAS10750_SPY0379MGAS10750_SPY1769
SPYO370552 MGAS10270_SPY1743MGAS10270_SPY1744MGAS10270_SPY1742MGAS10270_SPY0380MGAS10270_SPY1848MGAS10270_SPY1847MGAS10270_SPY0381MGAS10270_SPY1743
SPYO319701 M28_SPY1663M28_SPY1664M28_SPY1662M28_SPY0365M28_SPY1765M28_SPY1764M28_SPY0366M28_SPY1663
SPYO286636 M6_SPY1683M6_SPY1684M6_SPY1682M6_SPY0404M6_SPY1780M6_SPY1779M6_SPY0405M6_SPY1683
SPYO198466 SPYM3_1690SPYM3_1691SPYM3_1689SPYM3_0326SPYM3_1783SPYM3_1782SPYM3_0327SPYM3_1690
SPYO186103 SPYM18_2032SPYM18_2033SPYM18_2031SPYM18_0505SPYM18_2152SPYM18_2151SPYM18_0506SPYM18_2032
SPYO160490 SPY1964SPY1965SPY1963SPY0462SPY2093SPY2092SPY0463SPY1964
SPRO399741 SPRO_3784SPRO_3785SPRO_3786SPRO_3783SPRO_3788SPRO_3789SPRO_3790SPRO_3787SPRO_3784
SPEA398579 SPEA_2880SPEA_2881SPEA_2879SPEA_2878SPEA_2883SPEA_2884SPEA_2885SPEA_2882SPEA_2880
SONE211586 SO_1634SO_1633SO_1635SO_1636SO_1631SO_1630SO_1629SO_1632SO_1634
SMUT210007 SMU_1785SMU_1786SMU_1784CSMU_1625SMU_2031SMU_2032SMU_1624SMU_1785
SMEL266834 SMC02157SMC02097SMC03105SMC02095SMC02099SMC02100SMC02101SMC02098SMC02096
SMED366394 SMED_0114SMED_1135SMED_2879SMED_1137SMED_1133SMED_1132SMED_1131SMED_1134SMED_1136
SLOI323850 SHEW_2630SHEW_2631SHEW_2629SHEW_2628SHEW_2633SHEW_2634SHEW_2635SHEW_2632SHEW_2630
SHIGELLA S1465YAESYAEMYAELPYRHTSFRPSBFRRCDSA
SHAL458817 SHAL_2976SHAL_2977SHAL_2975SHAL_2974SHAL_2979SHAL_2980SHAL_2981SHAL_2978SHAL_2976
SHAE279808 SH1653SH1654SH1652SH1656SH1657SH1658SH1655SH1653
SGLO343509 SG1937SG1938SG1939SG1936SG1941SG1942SG1943SG1940SG1937
SFUM335543 SFUM_1783SFUM_1782SFUM_1784SFUM_1785SFUM_1780SFUM_1778SFUM_1781SFUM_1783
SFLE373384 SFV_1800SFV_0157SFV_0156SFV_0159SFV_0154SFV_0153SFV_0152SFV_0155SFV_0158
SFLE198214 AAN43376.1AAN41826.1AAN41825.1AAN41828.1AAN41823.1AAN41822.1AAN41821.1AAN41824.1AAN41827.1
SENT454169 SEHA_C0260SEHA_C0259SEHA_C0258SEHA_C0261SEHA_C0256SEHA_C0255SEHA_C0254SEHA_C0257SEHA_C0260
SENT321314 SCH_0222SCH_0221SCH_0220SCH_0223SCH_0218SCH_0217SCH_0216SCH_0219SCH_0222
SENT295319 SPA0229SPA0228SPA0227SPA0230SPA0225SPA0224SPA0223SPA0226SPA0229
SENT220341 STY0245STY0244STY0243STY0246STY0241STY0240STY0239STY0242STY0245
SENT209261 T0223T0222T0221T0224T0219T0218T0217T0220T0223
SDYS300267 SDY_0191SDY_0190SDY_0189SDY_0192SDY_0187SDY_0186SDY_0185SDY_0188SDY_0191
SDEN318161 SDEN_1559SDEN_1558SDEN_1560SDEN_1561SDEN_1556SDEN_1555SDEN_1554SDEN_1557SDEN_1559
SDEG203122 SDE_2592SDE_2593SDE_2591SDE_2590SDE_2595SDE_2596SDE_2597SDE_2594SDE_2592
SBOY300268 SBO_0163SBO_0162SBO_0161SBO_0164SBO_0159SBO_0158SBO_0157SBO_0160SBO_0163
SBAL402882 SHEW185_1450SHEW185_1449SHEW185_1451SHEW185_1452SHEW185_1447SHEW185_1446SHEW185_1445SHEW185_1448SHEW185_1450
SBAL399599 SBAL195_1486SBAL195_1485SBAL195_1487SBAL195_1488SBAL195_1483SBAL195_1482SBAL195_1481SBAL195_1484SBAL195_1486
RSOL267608 RSC1408RSC1410RSC1411RSC1406RSC1405RSC1404RSC1407RSC1409
RRUB269796 RRU_A1590RRU_A1592RRU_A1593RRU_A1588RRU_A1587RRU_A1586RRU_A1589RRU_A1591
RMET266264 RMET_1439RMET_1441RMET_1442RMET_1437RMET_1436RMET_1435RMET_1438RMET_1440
RLEG216596 PRL90200RL2225RL4372RL2227RL2223RL2222RL2221RL2224
RFER338969 RFER_2675RFER_1994RFER_1995RFER_1991RFER_1990RFER_1989RFER_1992RFER_1993
REUT381666 H16_A2088H16_A2051H16_A2049H16_A2048H16_A2053H16_A2054H16_A2055H16_A2052H16_A2088
REUT264198 REUT_B4016REUT_A1877REUT_A1875REUT_A1874REUT_A1879REUT_A1880REUT_A1881REUT_A1878REUT_B4016
PTHE370438 PTH_1258PTH_1257PTH_1260PTH_1261PTH_1254PTH_1252PTH_1255PTH_1258
PSYR223283 PSPTO_5541PSPTO_1538PSPTO_1540PSPTO_1541PSPTO_1536PSPTO_1535PSPTO_1534PSPTO_1537PSPTO_1539
PSYR205918 PSYR_1348PSYR_1347PSYR_1349PSYR_1350PSYR_1345PSYR_1344PSYR_1343PSYR_1346PSYR_1348
PSTU379731 PST_1542PST_1541PST_1543PST_1544PST_1539PST_1538PST_1537PST_1540PST_1542
PSP56811 PSYCPRWF_1799PSYCPRWF_1800PSYCPRWF_1798PSYCPRWF_1797PSYCPRWF_1802PSYCPRWF_0559PSYCPRWF_0558PSYCPRWF_1801PSYCPRWF_1799
PSP296591 BPRO_1084BPRO_2691BPRO_2689BPRO_2688BPRO_2693BPRO_2694BPRO_2695BPRO_2692BPRO_2690
PPUT76869 PPUTGB1_1151PPUTGB1_1150PPUTGB1_1152PPUTGB1_1153PPUTGB1_1148PPUTGB1_1147PPUTGB1_1146PPUTGB1_1149PPUTGB1_1151
PPUT351746 PPUT_4181PPUT_4182PPUT_4180PPUT_4179PPUT_4184PPUT_4185PPUT_4186PPUT_4183PPUT_4181
PPUT160488 PP_1596PP_1595PP_1597PP_1598PP_1593PP_1592PP_1591PP_1594PP_1596
PPRO298386 PBPRA2964PBPRA2962PBPRA2961PBPRA2966PBPRA2967PBPRA2968PBPRA2965PBPRA2963
PNAP365044 PNAP_3193PNAP_1764PNAP_1765PNAP_1760PNAP_1759PNAP_1758PNAP_1761PNAP_1763
PMUL272843 PM2002PM1989PM1988PM1991PM1986PM1985PM1984PM1987PM1990
PMEN399739 PMEN_0005PMEN_3049PMEN_3047PMEN_3046PMEN_3051PMEN_3052PMEN_3053PMEN_3050PMEN_3048
PLUM243265 PLU4775PLU0677PLU0676PLU0679PLU0674PLU0673PLU0672PLU0675PLU0678
PING357804 PING_2971PING_2972PING_2970PING_2969PING_2974PING_2975PING_2976PING_2973PING_2971
PHAL326442 PSHAA2031PSHAA2032PSHAA2030PSHAA2029PSHAA2034PSHAA2035PSHAA2036PSHAA2033PSHAA2031
PFLU220664 PFL_6200PFL_1180PFL_1182PFL_1183PFL_1178PFL_1177PFL_1176PFL_1179PFL_1181
PFLU216595 PFLU6110PFLU1274PFLU1276PFLU1277PFLU1272PFLU1271PFLU1270PFLU1273PFLU1275
PFLU205922 PFL_1106PFL_1105PFL_1107PFL_1108PFL_1103PFL_1102PFL_1101PFL_1104PFL_1106
PENT384676 PSEEN0705PSEEN4216PSEEN4214PSEEN4213PSEEN4218PSEEN4219PSEEN4220PSEEN4217PSEEN4215
PCRY335284 PCRYO_1711PCRYO_1712PCRYO_1710PCRYO_1709PCRYO_1714PCRYO_0390PCRYO_0389PCRYO_1713PCRYO_1711
PCAR338963 PCAR_2778PCAR_1915PCAR_1914PCAR_1919PCAR_1920PCAR_1921PCAR_1918PCAR_1916
PATL342610 PATL_1254PATL_1253PATL_1255PATL_1256PATL_1251PATL_1250PATL_1249PATL_1252PATL_1254
PARC259536 PSYC_1532PSYC_1533PSYC_1531PSYC_1530PSYC_1535PSYC_0351PSYC_0350PSYC_1534PSYC_1532
PAER208964 PA2536PA3652PA3650PA3649PA3654PA3655PA3656PA3653PA3651
PAER208963 PA14_31760PA14_17110PA14_17130PA14_17140PA14_17080PA14_17070PA14_17060PA14_17100PA14_17120
OANT439375 OANT_2887OANT_2033OANT_2035OANT_2031OANT_2030OANT_2029OANT_2032OANT_2887
NOCE323261 NOC_1726NOC_0812NOC_0814NOC_0815NOC_0810NOC_0809NOC_0808NOC_0811NOC_0813
NMUL323848 NMUL_A0662NMUL_A0661NMUL_A0663NMUL_A0664NMUL_A0659NMUL_A0658NMUL_A0657NMUL_A0660NMUL_A0662
NMEN374833 NMCC_1967NMCC_1966NMCC_1968NMCC_1969NMCC_2067NMCC_2066NMCC_2065NMCC_1965NMCC_1967
NMEN272831 NMC0176NMC0177NMC0175NMC0174NMC2082NMC2081NMC2080NMC0178NMC0176
NMEN122587 NMA0082NMA0081NMA0083NMA0084NMA0326NMA0327NMA0328NMA0080NMA0082
NMEN122586 NMB_0185NMB_0186NMB_0184NMB_0183NMB_2103NMB_2102NMB_2101NMB_0187NMB_0185
NHAM323097 NHAM_1698NHAM_1700NHAM_1701NHAM_1696NHAM_1695NHAM_1694NHAM_1697NHAM_1699
NGON242231 NGO1798NGO1797NGO1799NGO1800NGO1973NGO1974NGO1975NGO1796NGO1798
NEUT335283 NEUT_2031NEUT_2029NEUT_2028NEUT_2033NEUT_2034NEUT_2035NEUT_2032NEUT_2030
NEUR228410 NE1714NE1712NE1711NE1716NE1717NE1718NE1715NE1713
MSUC221988 MS1926MS1927MS1928MS1925MS1930MS1932MS1933MS1929MS1926
MSP400668 MMWYL1_1276MMWYL1_1278MMWYL1_1279MMWYL1_1274MMWYL1_1273MMWYL1_1272MMWYL1_1275MMWYL1_1277
MPET420662 MPE_A0483MPE_A1975MPE_A1973MPE_A1972MPE_A1977MPE_A1978MPE_A1979MPE_A1976MPE_A1974
MMAR394221 MMAR10_1384MMAR10_1386MMAR10_1387MMAR10_1382MMAR10_1381MMAR10_1380MMAR10_1383MMAR10_1385
MFLA265072 MFLA_1525MFLA_1526MFLA_1524MFLA_1523MFLA_1528MFLA_1529MFLA_1530MFLA_1527MFLA_1525
MCAP243233 MCA_0572MCA_0571MCA_0573MCA_0574MCA_0569MCA_0568MCA_0567MCA_0570MCA_0572
MAQU351348 MAQU_2543MAQU_2544MAQU_2542MAQU_2541MAQU_2546MAQU_2547MAQU_2548MAQU_2545MAQU_2543
LWEL386043 LWE1331LWE1330LWE1332LWE1333LWE1674LWE1675LWE1329LWE1331
LPNE400673 LPC_2841LPC_2842LPC_2840LPC_1141LPC_1142LPC_1143LPC_1140LPC_2841
LPNE297246 LPP0567LPP0566LPP0568LPP1677LPP1678LPP1679LPP1676LPP0567
LPNE297245 LPL0543LPL0542LPL0544LPL1671LPL1672LPL1673LPL1670LPL0543
LPNE272624 LPG0504LPG0503LPG0505LPG1712LPG1713LPG1714LPG1711LPG0504
LMON265669 LMOF2365_1333LMOF2365_1332LMOF2365_1334LMOF2365_1335LMOF2365_1330LMOF2365_1678LMOF2365_1679LMOF2365_1331LMOF2365_1333
LMON169963 LMO1316LMO1315LMO1317LMO1318LMO1313LMO1657LMO1658LMO1314LMO1316
LINN272626 LIN1353LIN1352LIN1354LIN1355LIN1350LIN1766LIN1767LIN1351LIN1353
LCHO395495 LCHO_2846LCHO_2844LCHO_2843LCHO_2848LCHO_2849LCHO_2850LCHO_2847LCHO_2845
LCAS321967 LSEI_1581LSEI_1582LSEI_1580LSEI_1584LSEI_1585LSEI_1586LSEI_1583LSEI_1581
KPNE272620 GKPORF_B4477GKPORF_B4476GKPORF_B4475GKPORF_B4479GKPORF_B4473GKPORF_B4472GKPORF_B4471GKPORF_B4474GKPORF_B4477
JSP375286 MMA_2054MMA_2052MMA_2051MMA_2056MMA_2057MMA_2058MMA_2055MMA_2053
ILOI283942 IL0840IL0841IL0839IL0838IL0843IL0844IL0845IL0842IL0840
HSOM228400 HSM_1460HSM_1461HSM_1463HSM_1459HSM_1465HSM_1018HSM_1019HSM_1464HSM_1460
HSOM205914 HS_0982HS_0983HS_0985HS_0981HS_0987HS_1089HS_1088HS_0986HS_0982
HINF71421 HI_0919HI_0920HI_0807HI_0918HI_1065HI_0914HI_0913HI_0808HI_0919
HINF374930 CGSHIEE_07420CGSHIEE_07415CGSHIEE_08025CGSHIEE_07425CGSHIEE_06760CGSHIEE_07445CGSHIEE_07450CGSHIEE_08020CGSHIEE_07420
HINF281310 NTHI1087NTHI1088NTHI0971NTHI1085NTHI1225NTHI1081NTHI1080NTHI0972NTHI1087
HHAL349124 HHAL_1462HHAL_1460HHAL_1459HHAL_1464HHAL_1465HHAL_1466HHAL_1463HHAL_1461
HDUC233412 HD_1193HD_1196HD_1186HD_1192HD_1597HD_1599HD_1600HD_1596HD_1193
HCHE349521 HCH_05247HCH_05248HCH_05246HCH_05245HCH_05251HCH_05252HCH_05253HCH_05249HCH_05247
HARS204773 HEAR1339HEAR1341HEAR1342HEAR1337HEAR1336HEAR1335HEAR1338HEAR1340
GTHE420246 GTNG_1108GTNG_1107GTNG_1109GTNG_1110GTNG_1105GTNG_1104GTNG_1103GTNG_1106GTNG_1108
GOXY290633 GOX1814GOX1816GOX1817GOX1812GOX0074GOX0075GOX1813GOX1815
GKAU235909 GK1254GK1253GK1255GK1256GK1251GK1250GK1249GK1252GK1254
GBET391165 GBCGDNIH1_0937GBCGDNIH1_0936GBCGDNIH1_0938GBCGDNIH1_0939GBCGDNIH1_0934GBCGDNIH1_1279GBCGDNIH1_0935GBCGDNIH1_0937
ESP42895 ENT638_0713ENT638_0712ENT638_0711ENT638_0714ENT638_0709ENT638_0708ENT638_0707ENT638_0710ENT638_0713
EFER585054 EFER_1592EFER_0196EFER_0195EFER_0198EFER_0193EFER_0192EFER_0191EFER_0194EFER_0197
EFAE226185 EF_2494EF_2495EF_2380EF_2396EF_2397EF_2398EF_2395EF_2494
ECOO157 Z2318YAESYAEMYAELPYRHTSFRPSBFRRCDSA
ECOL83334 ECS2011ECS0176ECS0175ECS0178ECS0173ECS0172ECS0171ECS0174ECS0177
ECOL585397 ECED1_0181ECED1_0180ECED1_0179ECED1_0182ECED1_0177ECED1_0176ECED1_0175ECED1_0178ECED1_0181
ECOL585057 ECIAI39_1713ECIAI39_0177ECIAI39_0176ECIAI39_0179ECIAI39_0173ECIAI39_0172ECIAI39_0171ECIAI39_0175ECIAI39_0178
ECOL585056 ECUMN_1655ECUMN_0171ECUMN_0170ECUMN_0173ECUMN_0168ECUMN_0167ECUMN_0166ECUMN_0169ECUMN_0172
ECOL585055 EC55989_1540EC55989_0168EC55989_0167EC55989_0170EC55989_0165EC55989_0164EC55989_0163EC55989_0166EC55989_0169
ECOL585035 ECS88_1504ECS88_0184ECS88_0183ECS88_0186ECS88_0181ECS88_0180ECS88_0179ECS88_0182ECS88_0185
ECOL585034 ECIAI1_1404ECIAI1_0172ECIAI1_0171ECIAI1_0175ECIAI1_0169ECIAI1_0168ECIAI1_0167ECIAI1_0170ECIAI1_0174
ECOL481805 ECOLC_2249ECOLC_3486ECOLC_3487ECOLC_3484ECOLC_3489ECOLC_3490ECOLC_3491ECOLC_3488ECOLC_3485
ECOL469008 ECBD_2231ECBD_3445ECBD_3446ECBD_3443ECBD_3448ECBD_3449ECBD_3450ECBD_3447ECBD_3444
ECOL439855 ECSMS35_1763ECSMS35_0185ECSMS35_0184ECSMS35_0187ECSMS35_0182ECSMS35_0181ECSMS35_0180ECSMS35_0183ECSMS35_0186
ECOL413997 ECB_01364ECB_00172ECB_00171ECB_00174ECB_00169ECB_00168ECB_00167ECB_00170ECB_00173
ECOL409438 ECSE_1489ECSE_0173ECSE_0172ECSE_0175ECSE_0170ECSE_0169ECSE_0168ECSE_0171ECSE_0174
ECOL405955 APECO1_560APECO1_1813APECO1_1814APECO1_1811APECO1_1816APECO1_1818APECO1_1815APECO1_1812
ECOL364106 UTI89_C1631UTI89_C0189UTI89_C0188UTI89_C0191UTI89_C0186UTI89_C0185UTI89_C0183UTI89_C0187UTI89_C0190
ECOL362663 ECP_1414ECP_0182ECP_0181ECP_0184ECP_0179ECP_0178ECP_0177ECP_0180ECP_0183
ECOL331111 ECE24377A_1590ECE24377A_0178ECE24377A_0177ECE24377A_0180ECE24377A_0175ECE24377A_0174ECE24377A_0173ECE24377A_0176ECE24377A_0179
ECOL316407 ECK1402:JW1406:B1409ECK0173:JW0169:B0174ECK0172:JW0168:B0173ECK0175:JW0171:B0176ECK0170:JW0166:B0171ECK0169:JW0165:B0170ECK0168:JW0164:B0169ECK0171:JW0167:B0172ECK0174:JW5810:B0175
ECOL199310 C1835C0211C0213C0207C0206C0204C0208C0212
ECAR218491 ECA1037ECA1036ECA1035ECA1038ECA1033ECA1032ECA1031ECA1034ECA1037
DSHI398580 DSHI_0185DSHI_1495DSHI_1497DSHI_1498DSHI_1493DSHI_1549DSHI_1548DSHI_1494DSHI_1496
DRED349161 DRED_1972DRED_1973DRED_1970DRED_1976DRED_1977DRED_1978DRED_1975DRED_1972
DARO159087 DARO_1747DARO_1746DARO_1748DARO_1749DARO_1744DARO_1743DARO_1742DARO_1745DARO_1747
CVIO243365 CV_2201CV_2200CV_2202CV_2203CV_2198CV_2197CV_2196CV_2199CV_2201
CVES412965 COSY_0026COSY_0027COSY_0025COSY_0506COSY_0972COSY_0971COSY_0246COSY_0026
CSP78 CAUL_2801CAUL_2799CAUL_2798CAUL_2803CAUL_2804CAUL_2805CAUL_2802CAUL_2800
CSAL290398 CSAL_0567CSAL_0569CSAL_0570CSAL_0565CSAL_0564CSAL_0563CSAL_0566CSAL_0568
CRUT413404 RMAG_0026RMAG_0027RMAG_0025RMAG_0552RMAG_0262RMAG_1073RMAG_1072RMAG_0261RMAG_0026
CPSY167879 CPS_1558CPS_1557CPS_1559CPS_1560CPS_1555CPS_1554CPS_1553CPS_1556CPS_1558
CPER289380 CPR_1667CPR_1668CPR_1666CPR_1665CPR_1670CPR_1671CPR_1672CPR_1669
CNOV386415 NT01CX_2144NT01CX_2145NT01CX_2143NT01CX_2142NT01CX_2147NT01CX_2148NT01CX_2149NT01CX_2146
CJAP155077 CJA_1117CJA_1116CJA_1118CJA_1119CJA_1114CJA_1111CJA_1110CJA_1115CJA_1117
CBUR434922 COXBU7E912_0613COXBU7E912_0612COXBU7E912_1463COXBU7E912_0610COXBU7E912_0609COXBU7E912_0608COXBU7E912_0611COXBU7E912_0613
CBUR360115 COXBURSA331_A1540COXBURSA331_A1541COXBURSA331_A1534COXBURSA331_A1543COXBURSA331_A1544COXBURSA331_A1545COXBURSA331_A1542COXBURSA331_A1540
CBUR227377 CBU_1381CBU_1382CBU_1376CBU_1384CBU_1385CBU_1386CBU_1383CBU_1381
CBOT508765 CLL_A1263CLL_A1262CLL_A1265CLL_A1266CLL_A1260CLL_A1259CLL_A1258CLL_A1261
CBLO291272 BPEN_285BPEN_284BPEN_283BPEN_286BPEN_281BPEN_280BPEN_279BPEN_282BPEN_285
CBLO203907 BFL277BFL276BFL275BFL278BFL273BFL272BFL271BFL274BFL277
CBEI290402 CBEI_1193CBEI_1192CBEI_1195CBEI_1196CBEI_1190CBEI_1189CBEI_1191CBEI_1193
CAULO CC1919CC1917CC1916CC1921CC1922CC1923CC1920CC1918
BWEI315730 BCERKBAB4_3645BCERKBAB4_3646BCERKBAB4_3644BCERKBAB4_3643BCERKBAB4_3648BCERKBAB4_3649BCERKBAB4_3650BCERKBAB4_3647BCERKBAB4_3645
BVIE269482 BCEP1808_1342BCEP1808_1921BCEP1808_1919BCEP1808_1918BCEP1808_1923BCEP1808_1924BCEP1808_1925BCEP1808_1922BCEP1808_1920
BTHU412694 BALH_3453BALH_3454BALH_3451BALH_3450BALH_3456BALH_3457BALH_3458BALH_3455BALH_3453
BTHU281309 BT9727_3563BT9727_3564BT9727_3562BT9727_3561BT9727_3566BT9727_3567BT9727_3568BT9727_3565BT9727_3563
BTHA271848 BTH_I2031BTH_I2033BTH_I2034BTH_I2029BTH_I2028BTH_I2027BTH_I2030BTH_I2032
BSUB BSU16540BSU16530BSU16550BSU16560BSU16510BSU16500BSU16490BSU16520BSU16540
BSP376 BRADO4136BRADO4134BRADO4133BRADO4138BRADO4139BRADO4140BRADO4137BRADO4135
BSP36773 BCEP18194_A4517BCEP18194_A5325BCEP18194_A5323BCEP18194_A5322BCEP18194_A5327BCEP18194_A5328BCEP18194_A5329BCEP18194_A5326BCEP18194_A5324
BPSE320373 BURPS668_2433BURPS668_2431BURPS668_2429BURPS668_2435BURPS668_2436BURPS668_2437BURPS668_2434BURPS668_2432
BPSE320372 BURPS1710B_A2802BURPS1710B_A2800BURPS1710B_A2798BURPS1710B_A2804BURPS1710B_A2805BURPS1710B_A2806BURPS1710B_A2803BURPS1710B_A2801
BPSE272560 BPSL2155BPSL2153BPSL2152BPSL2157BPSL2158BPSL2159BPSL2156BPSL2154
BPET94624 BPET2531BPET2529BPET2528BPET2533BPET2534BPET2535BPET2532BPET2530
BMAL320389 BMA10247_1324BMA10247_1322BMA10247_1320BMA10247_1326BMA10247_1327BMA10247_1328BMA10247_1325BMA10247_1323
BMAL320388 BMASAVP1_A2052BMASAVP1_A2050BMASAVP1_A2048BMASAVP1_A2054BMASAVP1_A2055BMASAVP1_A2056BMASAVP1_A2053BMASAVP1_A2051
BMAL243160 BMA_1551BMA_1549BMA_1548BMA_1553BMA_1554BMA_1555BMA_1552BMA_1550
BLIC279010 BL01238BL01239BL01237BL01236BL01242BL01243BL01244BL01240BL01238
BHAL272558 BH2422BH2423BH2421BH2420BH2425BH2426BH2427BH2424BH2422
BCLA66692 ABC2237ABC2238ABC2236ABC2235ABC2240ABC2241ABC2242ABC2239ABC2237
BCIC186490 BCI_0533BCI_0532BCI_0531BCI_0534BCI_0529BCI_0528BCI_0527BCI_0530BCI_0533
BCER572264 BCA_3921BCA_3922BCA_3920BCA_3919BCA_3924BCA_3925BCA_3926BCA_3923BCA_3921
BCER405917 BCE_3863BCE_3864BCE_3862BCE_3861BCE_3866BCE_3867BCE_3868BCE_3865BCE_3863
BCER315749 BCER98_2474BCER98_2475BCER98_2128BCER98_2472BCER98_2477BCER98_2478BCER98_2479BCER98_2476BCER98_2474
BCER288681 BCE33L3581BCE33L3582BCE33L3580BCE33L3579BCE33L3584BCE33L3585BCE33L3586BCE33L3583BCE33L3581
BCER226900 BC_3820BC_3821BC_3819BC_3823BC_3824BC_3825BC_3822BC_3820
BCEN331272 BCEN2424_1372BCEN2424_2015BCEN2424_2013BCEN2424_2012BCEN2424_2017BCEN2424_2018BCEN2424_2019BCEN2424_2016BCEN2424_2014
BCEN331271 BCEN_0890BCEN_6062BCEN_6064BCEN_6065BCEN_6060BCEN_6059BCEN_6058BCEN_6061BCEN_6063
BANT592021 BAA_3983BAA_3984BAA_3982BAA_3981BAA_3986BAA_3987BAA_3988BAA_3985BAA_3983
BANT568206 BAMEG_0672BAMEG_0671BAMEG_0673BAMEG_0674BAMEG_0669BAMEG_0668BAMEG_0667BAMEG_0670BAMEG_0672
BANT261594 GBAA3960GBAA3961GBAA3959GBAA3958GBAA3963GBAA3964GBAA3965GBAA3962GBAA3960
BANT260799 BAS3673BAS3674BAS3672BAS3671BAS3676BAS3677BAS3678BAS3675BAS3673
BAMY326423 RBAM_016380RBAM_016370RBAM_016390RBAM_016400RBAM_016350RBAM_016340RBAM_016330RBAM_016360RBAM_016380
BAMB398577 BAMMC406_1275BAMMC406_1917BAMMC406_1915BAMMC406_1914BAMMC406_1919BAMMC406_1920BAMMC406_1921BAMMC406_1918BAMMC406_1916
BAMB339670 BAMB_1250BAMB_2048BAMB_2046BAMB_2045BAMB_2050BAMB_2051BAMB_2052BAMB_2049BAMB_2047
ASP76114 EBA5992EBA5991EBA5994EBA5995EBA5988EBA5987EBA5986EBA5990EBA5992
ASP62977 ACIAD1664ACIAD1374ACIAD1376ACIAD1377ACIAD1372ACIAD2268ACIAD2269ACIAD1373ACIAD1375
ASP62928 AZO0668AZO1905AZO1903AZO1902AZO1907AZO1908AZO1909AZO1906AZO1904
ASP232721 AJS_2581AJS_2579AJS_2578AJS_2583AJS_2584AJS_2585AJS_2582AJS_2580
ASAL382245 ASA_3155ASA_3156ASA_3154ASA_3153ASA_3158ASA_3159ASA_3160ASA_3157ASA_3155
APLE434271 APJL_0438APJL_0428APJL_0436APJL_0562APJL_0560APJL_0559APJL_0563APJL_0437
APLE416269 APL_0414APL_0406APL_0412APL_0569APL_0567APL_0566APL_0570APL_0413
AORE350688 CLOS_1518CLOS_1517CLOS_1519CLOS_1515CLOS_1514CLOS_1513CLOS_1516CLOS_1518
AMET293826 AMET_2683AMET_2684AMET_2682AMET_2687AMET_2688AMET_2689AMET_2686AMET_2683
AHYD196024 AHA_1178AHA_1177AHA_1179AHA_1180AHA_1175AHA_1174AHA_1173AHA_1176AHA_1178
AFER243159 AFE_1635AFE_1636AFE_1634AFE_1633AFE_1638AFE_1639AFE_1640AFE_1637AFE_1635
AEHR187272 MLG_1858MLG_1859MLG_1857MLG_1856MLG_1861MLG_1862MLG_1863MLG_1860MLG_1858
ACRY349163 ACRY_2555ACRY_2557ACRY_2558ACRY_2553ACRY_1695ACRY_1694ACRY_2554ACRY_2556
ABUT367737 ABU_0191ABU_2202ABU_0871ABU_0647ABU_0541ABU_0540ABU_2277ABU_0191
ABOR393595 ABO_1148ABO_1147ABO_1149ABO_1150ABO_1145ABO_1144ABO_1143ABO_1146ABO_1148
ABAU360910 BAV1738BAV1740BAV1741BAV1736BAV1735BAV1734BAV1737BAV1739
AAVE397945 AAVE_0834AAVE_1827AAVE_1829AAVE_1830AAVE_1825AAVE_1824AAVE_1823AAVE_1826


Organism features enriched in list (features available for 228 out of the 240 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0021329117
Arrangment:Pairs 0.007871854112
Disease:Bubonic_plague 0.003435666
Disease:Dysentery 0.003435666
Disease:Gastroenteritis 0.00501911013
Endospores:No 2.897e-950211
GC_Content_Range4:0-40 3.962e-951213
GC_Content_Range4:40-60 1.475e-7117224
GC_Content_Range7:0-30 0.0001325747
GC_Content_Range7:30-40 0.000027144166
GC_Content_Range7:50-60 3.056e-765107
Genome_Size_Range5:0-2 2.716e-1719155
Genome_Size_Range5:4-6 2.062e-16117184
Genome_Size_Range5:6-10 0.00786032647
Genome_Size_Range9:0-1 0.0009700327
Genome_Size_Range9:1-2 1.201e-1316128
Genome_Size_Range9:2-3 0.009463937120
Genome_Size_Range9:4-5 0.00001535696
Genome_Size_Range9:5-6 3.629e-106188
Genome_Size_Range9:6-8 0.00038472538
Gram_Stain:Gram_Neg 3.088e-10166333
Gram_Stain:Gram_Pos 0.000707343150
Habitat:Multiple 0.002253384178
Habitat:Specialized 0.00058751053
Habitat:Terrestrial 0.00566801931
Motility:No 1.334e-831151
Motility:Yes 7.834e-11142267
Optimal_temp.:- 0.0099479112257
Optimal_temp.:35-37 0.00501911013
Optimal_temp.:37 0.006080331106
Oxygen_Req:Anaerobic 1.559e-816102
Oxygen_Req:Facultative 5.926e-11115201
Pathogenic_in:No 0.001160972226
Pathogenic_in:Plant 0.00566761115
Shape:Coccus 0.00452252282
Shape:Rod 2.387e-13177347
Shape:Sphere 0.0051626219
Shape:Spiral 0.0011336534
Temp._range:Mesophilic 0.0007601199473
Temp._range:Psychrophilic 0.002818189
Temp._range:Thermophilic 0.0075544735



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 81
Effective number of orgs (counting one per cluster within 468 clusters): 76

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RCAN293613 ncbi Rickettsia canadensis McKiel1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CFEL264202 ncbi Chlamydophila felis Fe/C-561
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  G6728   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10335   EG10139   
UURE95667 UU514
UURE95664 UUR10_0597
UPAR505682 UPA3_0545
UMET351160
TVOL273116
TPEN368408
TPAL243276
TLET416591 TLET_1793
TKOD69014
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
RCAN293613 A1E_00820
PTOR263820
PISL384616
PHOR70601
PFUR186497
PAST100379 PAM166
PARS340102
PAER178306
PABY272844
OTSU357244 OTBS_0436
NSEN222891 NSE_0719
NPHA348780
MTHE349307
MTHE187420
MSYN262723 MS53_0414
MSTA339860
MSED399549
MPUL272635 MYPU_5320
MPNE272634
MPEN272633 MYPE9580
MMYC272632 MSC_0607
MMOB267748 MMOB1770
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP059
MHYO262722 MHP7448_0056
MHYO262719 MHJ_0052
MHUN323259
MGEN243273
MFLO265311 MFL560
MCAP340047 MCAP_0372
MBUR259564
MBAR269797
MART243272 MART0052
MAEO419665
MACE188937
LXYL281090 LXX12450
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
CSUL444179
CPEL335992 SAR11_0816
CMET456442
CMAQ397948
CKOR374847
CFEL264202 CF0566
BXEN266265
BTUR314724
BHER314723
BGAR290434 BG0120
BBUR224326
BAFZ390236 BAPKO_0120
AYEL322098 AYWB_553
AURANTIMONAS
APER272557
AFUL224325


Organism features enriched in list (features available for 77 out of the 81 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.002646459
Arrangment:Chains 0.0004881392
Arrangment:Singles 0.000219852286
Endospores:No 7.216e-1559211
GC_Content_Range4:0-40 0.001223940213
GC_Content_Range4:60-100 0.00129119145
GC_Content_Range7:0-30 1.880e-82147
GC_Content_Range7:60-70 0.00386859134
Genome_Size_Range5:0-2 1.989e-1450155
Genome_Size_Range5:4-6 2.096e-94184
Genome_Size_Range5:6-10 0.0074893147
Genome_Size_Range9:0-1 5.794e-101727
Genome_Size_Range9:1-2 5.192e-633128
Genome_Size_Range9:3-4 0.0099891477
Genome_Size_Range9:4-5 0.0002883396
Genome_Size_Range9:5-6 0.0000203188
Gram_Stain:Gram_Neg 1.830e-625333
Habitat:Aquatic 0.00084422291
Habitat:Multiple 4.647e-85178
Habitat:Specialized 1.295e-62053
Optimal_temp.:- 0.002471123257
Optimal_temp.:100 0.002226433
Optimal_temp.:35-40 0.002226433
Optimal_temp.:85 0.000284144
Oxygen_Req:Aerobic 0.008556016185
Oxygen_Req:Anaerobic 1.016e-833102
Pathogenic_in:Human 0.000284415213
Pathogenic_in:No 0.004129040226
Salinity:Extreme_halophilic 0.000576257
Shape:Irregular_coccus 1.954e-121517
Shape:Rod 6.786e-1317347
Shape:Sphere 1.360e-121619
Temp._range:Hyperthermophilic 4.361e-131823
Temp._range:Mesophilic 9.127e-844473
Temp._range:Thermophilic 0.00723861035



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 40
Effective number of orgs (counting one per cluster within 468 clusters): 26

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CBLO203907 ncbi Candidatus Blochmannia floridanus 9.032e-66569
BCIC186490 Candidatus Baumannia cicadellinicola 0.00001176759
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN 0.00001476929
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00003227559
STHE322159 ncbi Streptococcus thermophilus LMD-9 0.00079686968
SPYO198466 ncbi Streptococcus pyogenes MGAS315 0.00085277028
SPYO160490 ncbi Streptococcus pyogenes M1 GAS 0.00094307118
SPYO186103 ncbi Streptococcus pyogenes MGAS8232 0.00094307118
STHE299768 ncbi Streptococcus thermophilus CNRZ1066 0.00097487148
STHE264199 ncbi Streptococcus thermophilus LMG 18311 0.00100777178
SPYO286636 ncbi Streptococcus pyogenes MGAS10394 0.00101887188
SPYO370554 ncbi Streptococcus pyogenes MGAS10750 0.00111207268
SPYO319701 ncbi Streptococcus pyogenes MGAS6180 0.00112417278
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00118667328
SPYO370552 ncbi Streptococcus pyogenes MGAS10270 0.00119957338
NGON242231 ncbi Neisseria gonorrhoeae FA 1090 0.001969511909
SMUT210007 ncbi Streptococcus mutans UA159 0.00225277948
NMEN374833 ncbi Neisseria meningitidis 053442 0.002411812179
NMEN122586 ncbi Neisseria meningitidis MC58 0.002615912289
NMEN272831 ncbi Neisseria meningitidis FAM18 0.002753712359
NMEN122587 ncbi Neisseria meningitidis Z2491 0.003048712499
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00323475397
PMAR167555 ncbi Prochlorococcus marinus NATL1A 0.00371395507
LMON265669 ncbi Listeria monocytogenes 4b F2365 0.004138412929
LINN272626 ncbi Listeria innocua Clip11262 0.004138412929
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.004345312999
ABUT367737 ncbi Arcobacter butzleri RM4018 0.00437888648
LMON169963 ncbi Listeria monocytogenes EGD-e 0.004467613039
PARC259536 ncbi Psychrobacter arcticus 273-4 0.004754013129
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 11842 0.00485495727
DETH243164 ncbi Dehalococcoides ethenogenes 195 0.00497195747
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas 0.00535643576
DSP216389 ncbi Dehalococcoides sp. BAV1 0.00565935857
DSP255470 ncbi Dehalococcoides sp. CBDB1 0.00606715917
HDUC233412 ncbi Haemophilus ducreyi 35000HP 0.006402913569
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-365 0.00642565967
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.007118113729
NMUL323848 ncbi Nitrosospira multiformis ATCC 25196 0.007452713799
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.00929429518
LGAS324831 ncbi Lactobacillus gasseri ATCC 33323 0.00978546347


Names of the homologs of the genes in the group in each of these orgs
  G6728   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10335   EG10139   
CBLO203907 BFL277BFL276BFL275BFL278BFL273BFL272BFL271BFL274BFL277
BCIC186490 BCI_0533BCI_0532BCI_0531BCI_0534BCI_0529BCI_0528BCI_0527BCI_0530BCI_0533
CBLO291272 BPEN_285BPEN_284BPEN_283BPEN_286BPEN_281BPEN_280BPEN_279BPEN_282BPEN_285
CRUT413404 RMAG_0026RMAG_0027RMAG_0025RMAG_0552RMAG_0262RMAG_1073RMAG_1072RMAG_0261RMAG_0026
STHE322159 STER_0245STER_0244STER_0246STER_0474STER_0106STER_0105STER_0475STER_0245
SPYO198466 SPYM3_1690SPYM3_1691SPYM3_1689SPYM3_0326SPYM3_1783SPYM3_1782SPYM3_0327SPYM3_1690
SPYO160490 SPY1964SPY1965SPY1963SPY0462SPY2093SPY2092SPY0463SPY1964
SPYO186103 SPYM18_2032SPYM18_2033SPYM18_2031SPYM18_0505SPYM18_2152SPYM18_2151SPYM18_0506SPYM18_2032
STHE299768 STR0198STR0197STR0199STR0438STR0074STR0073STR0439STR0198
STHE264199 STU0198STU0197STU0199STU0438STU0074STU0073STU0439STU0198
SPYO286636 M6_SPY1683M6_SPY1684M6_SPY1682M6_SPY0404M6_SPY1780M6_SPY1779M6_SPY0405M6_SPY1683
SPYO370554 MGAS10750_SPY1769MGAS10750_SPY1770MGAS10750_SPY1768MGAS10750_SPY0378MGAS10750_SPY1873MGAS10750_SPY1872MGAS10750_SPY0379MGAS10750_SPY1769
SPYO319701 M28_SPY1663M28_SPY1664M28_SPY1662M28_SPY0365M28_SPY1765M28_SPY1764M28_SPY0366M28_SPY1663
CVES412965 COSY_0026COSY_0027COSY_0025COSY_0506COSY_0972COSY_0971COSY_0246COSY_0026
SPYO370552 MGAS10270_SPY1743MGAS10270_SPY1744MGAS10270_SPY1742MGAS10270_SPY0380MGAS10270_SPY1848MGAS10270_SPY1847MGAS10270_SPY0381MGAS10270_SPY1743
NGON242231 NGO1798NGO1797NGO1799NGO1800NGO1973NGO1974NGO1975NGO1796NGO1798
SMUT210007 SMU_1785SMU_1786SMU_1784CSMU_1625SMU_2031SMU_2032SMU_1624SMU_1785
NMEN374833 NMCC_1967NMCC_1966NMCC_1968NMCC_1969NMCC_2067NMCC_2066NMCC_2065NMCC_1965NMCC_1967
NMEN122586 NMB_0185NMB_0186NMB_0184NMB_0183NMB_2103NMB_2102NMB_2101NMB_0187NMB_0185
NMEN272831 NMC0176NMC0177NMC0175NMC0174NMC2082NMC2081NMC2080NMC0178NMC0176
NMEN122587 NMA0082NMA0081NMA0083NMA0084NMA0326NMA0327NMA0328NMA0080NMA0082
PMAR59920 PMN2A_0664PMN2A_0656PMN2A_0751PMN2A_0808PMN2A_1854PMN2A_1853PMN2A_0664
PMAR167555 NATL1_14961NATL1_14881NATL1_15911NATL1_16631NATL1_05791NATL1_05781NATL1_14961
LMON265669 LMOF2365_1333LMOF2365_1332LMOF2365_1334LMOF2365_1335LMOF2365_1330LMOF2365_1678LMOF2365_1679LMOF2365_1331LMOF2365_1333
LINN272626 LIN1353LIN1352LIN1354LIN1355LIN1350LIN1766LIN1767LIN1351LIN1353
AFER243159 AFE_1635AFE_1636AFE_1634AFE_1633AFE_1638AFE_1639AFE_1640AFE_1637AFE_1635
ABUT367737 ABU_0191ABU_2202ABU_0871ABU_0647ABU_0541ABU_0540ABU_2277ABU_0191
LMON169963 LMO1316LMO1315LMO1317LMO1318LMO1313LMO1657LMO1658LMO1314LMO1316
PARC259536 PSYC_1532PSYC_1533PSYC_1531PSYC_1530PSYC_1535PSYC_0351PSYC_0350PSYC_1534PSYC_1532
LDEL390333 LDB1340LDB1341LDB1339LDB1343LDB1344LDB1345LDB1340
DETH243164 DET_0372DET_0373DET_0371DET_0370DET_0375DET_0374DET_0372
ECHA205920 ECH_0269ECH_0557ECH_1070ECH_0266ECH_0514ECH_0269
DSP216389 DEHABAV1_0354DEHABAV1_0355DEHABAV1_0353DEHABAV1_0352DEHABAV1_0357DEHABAV1_0356DEHABAV1_0354
DSP255470 CBDBA315CBDBA316CBDBA314CBDBA313CBDBA319CBDBA318CBDBA315
HDUC233412 HD_1193HD_1196HD_1186HD_1192HD_1597HD_1599HD_1600HD_1596HD_1193
LDEL321956 LBUL_1249LBUL_1250LBUL_1248LBUL_1252LBUL_1253LBUL_1254LBUL_1249
NOCE323261 NOC_1726NOC_0812NOC_0814NOC_0815NOC_0810NOC_0809NOC_0808NOC_0811NOC_0813
NMUL323848 NMUL_A0662NMUL_A0661NMUL_A0663NMUL_A0664NMUL_A0659NMUL_A0658NMUL_A0657NMUL_A0660NMUL_A0662
LCAS321967 LSEI_1581LSEI_1582LSEI_1580LSEI_1584LSEI_1585LSEI_1586LSEI_1583LSEI_1581
LGAS324831 LGAS_0806LGAS_0805LGAS_0807LGAS_0803LGAS_0802LGAS_0801LGAS_0806


Organism features enriched in list (features available for 39 out of the 40 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.500e-61892
Arrangment:Singles 0.003386811286
Disease:Listeriosis 0.004367722
Disease:Meningitis_and_septicemia 0.000017344
Disease:Wide_range_of_infections 9.213e-7711
GC_Content_Range4:0-40 0.000628724213
GC_Content_Range7:30-40 0.000353121166
Genome_Size_Range5:0-2 3.151e-725155
Genome_Size_Range9:1-2 9.838e-722128
Gram_Stain:Gram_Neg 0.001157613333
Gram_Stain:Gram_Pos 0.000255520150
Motility:Yes 0.00048788267
Optimal_temp.:30-35 0.000501047
Optimal_temp.:35 0.007529037
Optimal_temp.:35-37 0.0008245513
Shape:Coccus 0.00001241682
Shape:Rod 0.000124012347



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181620.5395
PWY-5386 (methylglyoxal degradation I)3051950.5114
GLUCONSUPER-PWY (D-gluconate degradation)2291600.4911
GLYCOCAT-PWY (glycogen degradation I)2461670.4874
AST-PWY (arginine degradation II (AST pathway))1201040.4832
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001870.4715
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951410.4686
PWY-5918 (heme biosynthesis I)2721750.4670
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491650.4651
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491650.4651
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761310.4630
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251540.4623
PWY-6196 (serine racemization)102900.4520
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861780.4489
VALDEG-PWY (valine degradation I)2901780.4383
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911780.4356
DAPLYSINESYN-PWY (lysine biosynthesis I)3421970.4325
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831300.4309
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961790.4291
PWY-1269 (CMP-KDO biosynthesis I)3251890.4213
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81740.4197
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901750.4185
LIPASYN-PWY (phospholipases)2121410.4130
PWY-5194 (siroheme biosynthesis)3121820.4077
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911300.4036
PWY-561 (superpathway of glyoxylate cycle)1621160.4030
PWY-6134 (tyrosine biosynthesis IV)89770.4026
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391910.4000



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10335   EG10139   
G67280.9999280.9998230.9998480.9997070.9997120.9996990.9998130.999953
G60920.9999640.9999690.9999490.99990.9999220.9999770.999986
EG127150.9999790.9999150.9998450.9998730.9999470.999963
EG124360.9999190.999850.9998870.999930.999963
EG115390.9999570.9999660.9999960.999914
EG110330.9999930.9999490.999894
EG109010.9999490.999883
EG103350.999954
EG10139



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PAIRWISE BLAST SCORES:

  G6728   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10335   EG10139   
G67280.0f0-------2.4e-17
G6092-0.0f0-------
EG12715--0.0f0------
EG12436---0.0f0-----
EG11539----0.0f0----
EG11033-----0.0f0---
EG10901------0.0f0--
EG10335-------0.0f0-
EG10139--------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10139 EG10335 EG10901 EG11033 EG11539 EG12436 EG12715 G6092 (centered at EG12715)
G6728 (centered at G6728)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6728   G6092   EG12715   EG12436   EG11539   EG11033   EG10901   EG10335   EG10139   
357/623411/623401/623417/623413/623412/623415/623414/623382/623
AAEO224324:0:Tyes---88601---
AAUR290340:2:Tyes--39--0-2-
AAVE397945:0:Tyes0979981982977976975978-
ABAC204669:0:Tyes11691168117011710-3092-
ABAU360910:0:Tyes-46721035
ABOR393595:0:Tyes546721035
ABUT367737:0:Tyes02005-67645234834720790
ACAU438753:0:Tyes-4672-035
ACEL351607:0:Tyes14-0--171815-
ACRY349163:8:Tyes-86987187286710868870
ADEH290397:0:Tyes-3345334333427-083344
AEHR187272:0:Tyes231056742
AFER243159:0:Tyes231056742
AHYD196024:0:Tyes546721035
ALAI441768:0:Tyes---0-89--
AMAR234826:0:Tyes3-437-0-471-3
AMAR329726:9:Tyes586396034684898--4899586
AMET293826:0:Tyes120-56741
ANAE240017:0:Tyes--0--6-43
AORE350688:0:Tyes546-21035
APHA212042:0:Tyes2-312-0-270--
APLE416269:0:Tyes-8061621601591637
APLE434271:0:Tno-8061181161151197
ASAL382245:5:Tyes231056742
ASP1667:3:Tyes--31--0-2-
ASP232721:2:Tyes-31056742
ASP62928:0:Tyes012731271127012751276127712741272
ASP62977:0:Tyes278245083283313
ASP76114:2:Tyes546721035
AVAR240292:3:Tyes119929067911110---1199
AYEL322098:4:Tyes-----0---
BABO262698:1:Tno-2-04563-
BAFZ390236:2:Fyes0--------
BAMB339670:3:Tno0812810809814815816813811
BAMB398577:3:Tno0643641640645646647644642
BAMY326423:0:Tyes546721035
BANT260799:0:Tno231056742
BANT261594:2:Tno231056742
BANT568206:2:Tyes546721035
BANT592021:2:Tno231056742
BAPH198804:0:Tyes-54-2103-
BAPH372461:0:Tyes----2103-
BBAC264462:0:Tyes-4-62-035
BBAC360095:0:Tyes----21034
BBRO257310:0:Tyes-4672103-
BCAN483179:1:Tno-2-04563-
BCEN331271:0:Tno-46721035
BCEN331271:2:Tno0--------
BCEN331272:3:Tyes0642640639644645646643641
BCER226900:1:Tyes120-45631
BCER288681:0:Tno231056742
BCER315749:1:Tyes3203210318323324325322320
BCER405917:1:Tyes231056742
BCER572264:1:Tno231056742
BCIC186490:0:Tyes654721036
BCLA66692:0:Tyes231056742
BFRA272559:1:Tyes287702975-168---2877
BFRA295405:0:Tno312803240-196---3128
BGAR290434:2:Fyes0--------
BHAL272558:0:Tyes231056742
BHEN283166:0:Tyes---52103-
BJAP224911:0:Fyes-3105-742
BLIC279010:0:Tyes546721035
BLON206672:0:Tyes--0--1388-1390-
BMAL243160:1:Tno-31056742
BMAL320388:1:Tno-31056742
BMAL320389:1:Tyes-31056742
BMEL224914:1:Tno-4-62103-
BMEL359391:1:Tno-2-04563-
BOVI236:1:Tyes-2-04563-
BPAR257311:0:Tno-4672103-
BPER257313:0:Tyes-4672103-
BPET94624:0:Tyes-31056742
BPSE272560:1:Tyes-31056742
BPSE320372:1:Tno-31056742
BPSE320373:1:Tno-31056742
BPUM315750:0:Tyes4356-0-24
BQUI283165:0:Tyes---03452-
BSP107806:2:Tyes-54-2103-
BSP36773:2:Tyes0818816815820821822819817
BSP376:0:Tyes-31056742
BSUB:0:Tyes546721035
BSUI204722:1:Tyes-2-04563-
BSUI470137:1:Tno-2-04563-
BTHA271848:1:Tno-46721035
BTHE226186:0:Tyes250217510-242---2502
BTHU281309:1:Tno231056742
BTHU412694:1:Tno231056742
BTRI382640:1:Tyes---52103-
BVIE269482:7:Tyes0572570569574575576573571
BWEI315730:4:Tyes231056742
CABO218497:0:Tyes--374--0---
CACE272562:1:Tyes--7810-2-
CAULO:0:Tyes-31056742
CBEI290402:0:Tyes436710-24
CBLO203907:0:Tyes654721036
CBLO291272:0:Tno654721036
CBOT36826:1:Tno6710---8-
CBOT441770:0:Tyes5610---7-
CBOT441771:0:Tno5610---7-
CBOT441772:1:Tno5610---7-
CBOT498213:1:Tno5610---7-
CBOT508765:1:Tyes54782103-
CBOT515621:2:Tyes4510---6-
CBOT536232:0:Tno5610---7-
CBUR227377:1:Tyes56-0891075
CBUR360115:1:Tno67-09101186
CBUR434922:2:Tno54-81721035
CCAV227941:1:Tyes--393--0---
CCHL340177:0:Tyes1472465011652-1654-1472
CCON360104:2:Tyes----0-46411-
CCUR360105:0:Tyes87---238-0--
CDES477974:0:Tyes54910--03-
CDIF272563:1:Tyes5610-10118-
CDIP257309:0:Tyes--0--7-5-
CEFF196164:0:Fyes--0--9-54
CFEL264202:1:Tyes--0------
CFET360106:0:Tyes----0-218--
CGLU196627:0:Tyes--0--9-76
CHOM360107:1:Tyes--0-1141-701--
CHUT269798:0:Tyes030022591-2162631-2170
CHYD246194:0:Tyes230-7-962
CJAP155077:0:Tyes768941057
CJEI306537:0:Tyes-----3-10
CJEJ192222:0:Tyes---0206112113-280
CJEJ195099:0:Tno---0197103--322
CJEJ354242:2:Tyes---0203109--256
CJEJ360109:0:Tyes---27879173--0
CJEJ407148:0:Tno---0210116--257
CKLU431943:1:Tyes54672-03-
CMIC31964:2:Tyes--1037--0---
CMIC443906:2:Tyes--799--0---
CMUR243161:1:Tyes--287--0---
CNOV386415:0:Tyes23105674-
CPEL335992:0:Tyes---0-----
CPER195102:1:Tyes120-4563-
CPER195103:0:Tno120-4563-
CPER289380:3:Tyes23105674-
CPHY357809:0:Tyes2310--594-
CPNE115711:1:Tyes--364--0---
CPNE115713:0:Tno--0--359---
CPNE138677:0:Tno--0--362---
CPNE182082:0:Tno--0--381---
CPRO264201:0:Fyes--124-17800---
CPSY167879:0:Tyes546721035
CRUT413404:0:Tyes1204962259899882241
CSAL290398:0:Tyes-46721035
CSP501479:8:Fyes-282625-10--
CSP78:2:Tyes-31056742
CTEP194439:0:Tyes-142101630-16321431108
CTET212717:0:Tyes5478--03-
CTRA471472:0:Tyes--287--0---
CTRA471473:0:Tno--287--0---
CVES412965:0:Tyes120461-9079062121
CVIO243365:0:Tyes546721035
DARO159087:0:Tyes546721035
DDES207559:0:Tyes-4107-116-
DETH243164:0:Tyes23105--42
DGEO319795:1:Tyes0----3-10
DHAF138119:0:Tyes230-5-742
DNOD246195:0:Tyes-2-045631
DOLE96561:0:Tyes5-672-035
DPSY177439:2:Tyes32450--13
DRAD243230:3:Tyes0----3-10
DRED349161:0:Tyes230-67852
DSHI398580:5:Tyes013331335133613311387138613321334
DSP216389:0:Tyes23105--42
DSP255470:0:Tno23105--42
DVUL882:1:Tyes2-0-5784-
ECAN269484:0:Tyes287-0392289-45--
ECAR218491:0:Tyes654721036
ECHA205920:0:Tyes3-2827680-242-3
ECOL199310:0:Tno15815-732046
ECOL316407:0:Tno124754721036
ECOL331111:6:Tno135354721036
ECOL362663:0:Tno123054721036
ECOL364106:1:Tno144565832047
ECOL405955:2:Tyes12335472-036
ECOL409438:6:Tyes134954721036
ECOL413997:0:Tno120654721036
ECOL439855:4:Tno153165832047
ECOL469008:0:Tno012121213121012151216121712141211
ECOL481805:0:Tno012481249124612511252125312501247
ECOL585034:0:Tno123354821037
ECOL585035:0:Tno128854721036
ECOL585055:0:Tno137554721036
ECOL585056:2:Tno150054721036
ECOL585057:0:Tno156665821047
ECOL585397:0:Tno654721036
ECOL83334:0:Tno188154721036
ECOLI:0:Tno126854721036
ECOO157:0:Tno193654721036
EFAE226185:3:Tyes109110-016171815109
EFER585054:1:Tyes137854721036
ELIT314225:0:Tyes--89--05-
ERUM254945:0:Tyes270-0387272-39--
ERUM302409:0:Tno272-0388274-39--
ESP42895:1:Tyes654721036
FALN326424:0:Tyes--0----4-
FJOH376686:0:Tyes20531127--0---2053
FMAG334413:1:Tyes---23--03-
FNOD381764:0:Tyes-563-0--303--
FNUC190304:0:Tyes181718351833-210--
FPHI484022:1:Tyes01626--4520
FRANT:0:Tno541179--1035
FSP106370:0:Tyes3-0------
FSP1855:0:Tyes0-3------
FSUC59374:0:Tyes-49130--3-
FTUL351581:0:Tno54281--1035
FTUL393011:0:Tno54264--1035
FTUL393115:0:Tyes541157--1035
FTUL401614:0:Tyes541244--1035
FTUL418136:0:Tno118211830--1186118711841182
FTUL458234:0:Tno54278--1035
GBET391165:0:Tyes32450-34513
GFOR411154:0:Tyes2597114--134-02597
GKAU235909:1:Tyes546721035
GMET269799:1:Tyes5-672-03-
GOXY290633:5:Tyes-17261728172917240117251727
GSUL243231:0:Tyes2-105-74-
GTHE420246:1:Tyes546721035
GURA351605:0:Tyes23105-74-
GVIO251221:0:Tyes13010216915552259--183-
HACI382638:1:Tyes---9803240---
HARS204773:0:Tyes-46721035
HAUR316274:2:Tyes37830--4823--48223783
HCHE349521:0:Tyes231056742
HDUC233412:0:Tyes78063453473483447
HHAL349124:0:Tyes-31056742
HHEP235279:0:Tyes-671-1263399-6500-
HINF281310:0:Tyes103104010222298971103
HINF374930:0:Tyes1161152271170121122226116
HINF71421:0:Tno11111201102521061051111
HMOD498761:0:Tyes658-2-03-
HNEP81032:0:Tyes--6721035
HPY:0:Tno---0521----
HPYL357544:1:Tyes---0506----
HPYL85963:0:Tno---0465----
HSOM205914:1:Tyes1240610910851
HSOM228400:0:Tno43743844043644201441437
ILOI283942:0:Tyes231056742
JSP290400:1:Tyes--15115015601--
JSP375286:0:Tyes-31056742
KPNE272620:2:Tyes654721036
KRAD266940:2:Fyes--0--11-98
LACI272621:0:Tyes12-0456-1
LBIF355278:2:Tyes--0-4-6-1
LBIF456481:2:Tno--0-4-6-1
LBOR355276:1:Tyes--6-2-0--
LBOR355277:1:Tno--6-2-0--
LBRE387344:2:Tyes12-0456-1
LCAS321967:1:Tyes12-045631
LCHO395495:0:Tyes-31056742
LDEL321956:0:Tyes12-0456-1
LDEL390333:0:Tyes12-0456-1
LGAS324831:0:Tyes54-6210-5
LHEL405566:0:Tyes-1-0345--
LINN272626:1:Tno3245041641713
LINT189518:1:Tyes--0-4-6-1
LINT267671:1:Tno--6-2-0-5
LINT363253:3:Tyes--910--06-
LJOH257314:0:Tyes12-0456-1
LLAC272622:5:Tyes12-0--22--
LLAC272623:0:Tyes12-0--25--
LMES203120:1:Tyes-0-25005015024991
LMON169963:0:Tno3245034434513
LMON265669:0:Tyes3245034734813
LPLA220668:0:Tyes12-0-5631
LPNE272624:0:Tno10-212071208120912061
LPNE297245:1:Fno10-211171118111911161
LPNE297246:1:Fyes10-211061107110811051
LPNE400673:0:Tno16641665-166312301664
LREU557436:0:Tyes76-8-10-7
LSAK314315:0:Tyes12-0-67-1
LSPH444177:1:Tyes546710--5
LWEL386043:0:Tyes2134-34534602
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