CANDIDATE ID: 61

CANDIDATE ID: 61

NUMBER OF GENES: 9
AVERAGE SCORE:    9.9964161e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   2.2299106e-17

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7953 (yjjW) (b4379)
   Products of gene:
     - G7953-MONOMER (predicted pyruvate formate lyase activating enzyme)

- G7627 (tdcE) (b3114)
   Products of gene:
     - KETOBUTFORMLY-INACT-MONOMER (2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive)
     - KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
       Reactions:
        2-oxobutanoate + coenzyme A  ->  propanoyl-CoA + formate
         In pathways
         THREOCAT-PWY (superpathway of threonine metabolism)
         PWY-5437 (threonine degradation I)
        formate + acetyl-CoA  =  pyruvate + coenzyme A
         In pathways
         P441-PWY (P441-PWY)
         ANARESP1-PWY (respiration (anaerobic))
         PWY-5480 (PWY-5480)
         PWY-5485 (PWY-5485)
         FERMENTATION-PWY (mixed acid fermentation)
         PWY-5493 (PWY-5493)

- G6427 (ybiY) (b0824)
   Products of gene:
     - G6427-MONOMER (predicted pyruvate formate lyase activating enzyme)

- G6426 (ybiW) (b0823)
   Products of gene:
     - G6426-MONOMER (predicted pyruvate formate lyase)

- EG11911 (pflC) (b3952)
   Products of gene:
     - EG11911-MONOMER (probable pyruvate formate lyase 2 activating enzyme)

- EG11910 (pflD) (b3951)
   Products of gene:
     - EG11910-MONOMER (formate acetyltransferase 2)

- EG11784 (yfiD) (b2579)
   Products of gene:
     - EG11784-MONOMER (stress-induced alternate pyruvate formate-lyase subunit)

- EG10701 (pflB) (b0903)
   Products of gene:
     - PYRUVFORMLY-CPLX (pyruvate formate-lyase / 2-ketobutyrate formate-lyase)
       Reactions:
        formate + acetyl-CoA  =  pyruvate + coenzyme A
         In pathways
         P441-PWY (P441-PWY)
         ANARESP1-PWY (respiration (anaerobic))
         PWY-5480 (PWY-5480)
         PWY-5485 (PWY-5485)
         FERMENTATION-PWY (mixed acid fermentation)
         PWY-5493 (PWY-5493)
        2-oxobutanoate + coenzyme A  ->  propanoyl-CoA + formate
         In pathways
         THREOCAT-PWY (superpathway of threonine metabolism)
         PWY-5437 (threonine degradation I)
     - PYRUVFORMLY-MONOMER (PflB)
     - PYRUVFORMLY-INACTIVE-CPLX (pyruvate formate-lyase (inactive))

- EG10028 (pflA) (b0902)
   Products of gene:
     - PFLACTENZ-MONOMER (pyruvate formate-lyase activating enzyme)
       Reactions:
        2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive + a reduced flavodoxin + S-adenosyl-L-methionine  ->  5'-deoxyadenosine + 2-ketobutyrate formate-lyase / pyruvate formate-lyase 4 + an oxidized flavodoxin



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ORGANISMS CONTAINING AT LEAST 8 GENES FROM THE GROUP:

Total number of orgs: 195
Effective number of orgs (counting one per cluster within 468 clusters): 113

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM49
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317589
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329539
YPES386656 ncbi Yersinia pestis Pestoides F9
YPES377628 ncbi Yersinia pestis Nepal5169
YPES360102 ncbi Yersinia pestis Antiqua9
YPES349746 ncbi Yersinia pestis Angola9
YPES214092 ncbi Yersinia pestis CO929
YPES187410 ncbi Yersinia pestis KIM 109
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80819
VVUL216895 ncbi Vibrio vulnificus CMCP69
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106339
VFIS312309 ncbi Vibrio fischeri ES1149
VCHO345073 ncbi Vibrio cholerae O3959
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169619
TTUR377629 ncbi Teredinibacter turnerae T79019
TLET416591 ncbi Thermotoga lettingae TMO8
TKOD69014 ncbi Thermococcus kodakarensis KOD19
TELO197221 ncbi Thermosynechococcus elongatus BP-19
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen9
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT29
STHE292459 ncbi Symbiobacterium thermophilum IAM 148639
SSUI391296 ncbi Streptococcus suis 98HAH339
SSUI391295 ncbi Streptococcus suis 05ZYH339
SSP94122 ncbi Shewanella sp. ANA-39
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)9
SSP321327 ncbi Synechococcus sp. JA-3-3Ab9
SSON300269 ncbi Shigella sonnei Ss0469
SSED425104 ncbi Shewanella sediminis HAW-EB39
SPYO370554 ncbi Streptococcus pyogenes MGAS107509
SPYO370553 ncbi Streptococcus pyogenes MGAS20969
SPYO370552 ncbi Streptococcus pyogenes MGAS102709
SPYO370551 ncbi Streptococcus pyogenes MGAS94299
SPYO319701 ncbi Streptococcus pyogenes MGAS61809
SPYO293653 ncbi Streptococcus pyogenes MGAS50059
SPYO286636 ncbi Streptococcus pyogenes MGAS103949
SPYO198466 ncbi Streptococcus pyogenes MGAS3159
SPYO193567 ncbi Streptococcus pyogenes SSI-19
SPYO186103 ncbi Streptococcus pyogenes MGAS82329
SPYO160490 ncbi Streptococcus pyogenes M1 GAS9
SPRO399741 ncbi Serratia proteamaculans 5689
SPNE488221 ncbi Streptococcus pneumoniae 705859
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-69
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-149
SPNE171101 ncbi Streptococcus pneumoniae R69
SPNE170187 ncbi Streptococcus pneumoniae G549
SPNE1313 Streptococcus pneumoniae9
SPEA398579 ncbi Shewanella pealeana ATCC 7003459
SONE211586 ncbi Shewanella oneidensis MR-19
SMUT210007 ncbi Streptococcus mutans UA1599
SLOI323850 ncbi Shewanella loihica PV-49
SHIGELLA ncbi Shigella flexneri 2a str. 2457T9
SHAL458817 ncbi Shewanella halifaxensis HAW-EB49
SGOR29390 Streptococcus gordonii Challis9
SGLO343509 ncbi Sodalis glossinidius morsitans9
SFLE373384 ncbi Shigella flexneri 5 str. 84019
SFLE198214 ncbi Shigella flexneri 2a str. 3019
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122289
SEPI176279 ncbi Staphylococcus epidermidis RP62A9
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4769
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B679
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91509
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT189
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty29
SDYS300267 ncbi Shigella dysenteriae Sd1979
SDEN318161 ncbi Shewanella denitrificans OS2179
SBOY300268 ncbi Shigella boydii Sb2279
SBAL402882 ncbi Shewanella baltica OS1859
SBAL399599 ncbi Shewanella baltica OS1959
SAUR93062 ncbi Staphylococcus aureus aureus COL9
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83259
SAUR426430 ncbi Staphylococcus aureus aureus Newman9
SAUR418127 ncbi Staphylococcus aureus aureus Mu39
SAUR367830 Staphylococcus aureus aureus USA3009
SAUR359787 ncbi Staphylococcus aureus aureus JH19
SAUR359786 ncbi Staphylococcus aureus aureus JH99
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4769
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2529
SAUR273036 ncbi Staphylococcus aureus RF1229
SAUR196620 ncbi Staphylococcus aureus aureus MW29
SAUR158879 ncbi Staphylococcus aureus aureus N3159
SAUR158878 ncbi Staphylococcus aureus aureus Mu509
SAGA211110 ncbi Streptococcus agalactiae NEM3169
SAGA208435 ncbi Streptococcus agalactiae 2603V/R9
SAGA205921 ncbi Streptococcus agalactiae A9099
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111709
RPAL316056 ncbi Rhodopseudomonas palustris BisB189
RPAL316055 ncbi Rhodopseudomonas palustris BisA539
RALB246199 Ruminococcus albus 89
PTHE370438 ncbi Pelotomaculum thermopropionicum SI8
PRUM264731 ncbi Prevotella ruminicola 239
PPRO298386 ncbi Photobacterium profundum SS99
PMUL272843 ncbi Pasteurella multocida multocida Pm709
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO19
PINT246198 Prevotella intermedia 179
PING357804 ncbi Psychromonas ingrahamii 379
PDIS435591 ncbi Parabacteroides distasonis ATCC 85039
PCAR338963 ncbi Pelobacter carbinolicus DSM 23809
NHAM323097 ncbi Nitrobacter hamburgensis X149
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E9
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53349
LSAK314315 ncbi Lactobacillus sakei sakei 23K9
LPLA220668 ncbi Lactobacillus plantarum WCFS19
LMON265669 ncbi Listeria monocytogenes 4b F23659
LMON169963 ncbi Listeria monocytogenes EGD-e9
LINN272626 ncbi Listeria innocua Clip112629
LCAS321967 ncbi Lactobacillus casei ATCC 3349
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785789
HSOM228400 ncbi Haemophilus somnus 23369
HSOM205914 ncbi Haemophilus somnus 129PT9
HINF71421 ncbi Haemophilus influenzae Rd KW209
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HDUC233412 ncbi Haemophilus ducreyi 35000HP9
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S859
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255869
FMAG334413 ncbi Finegoldia magna ATCC 293289
ESP42895 Enterobacter sp.9
EFER585054 ncbi Escherichia fergusonii ATCC 354699
EFAE226185 ncbi Enterococcus faecalis V5839
ECOO157 ncbi Escherichia coli O157:H7 EDL9339
ECOL83334 Escherichia coli O157:H79
ECOL585397 ncbi Escherichia coli ED1a9
ECOL585057 ncbi Escherichia coli IAI399
ECOL585056 ncbi Escherichia coli UMN0269
ECOL585055 ncbi Escherichia coli 559899
ECOL585035 ncbi Escherichia coli S889
ECOL585034 ncbi Escherichia coli IAI19
ECOL481805 ncbi Escherichia coli ATCC 87399
ECOL469008 ncbi Escherichia coli BL21(DE3)9
ECOL439855 ncbi Escherichia coli SMS-3-59
ECOL413997 ncbi Escherichia coli B str. REL6069
ECOL409438 ncbi Escherichia coli SE119
ECOL405955 ncbi Escherichia coli APEC O19
ECOL364106 ncbi Escherichia coli UTI899
ECOL362663 ncbi Escherichia coli 5369
ECOL331111 ncbi Escherichia coli E24377A9
ECOL316407 ncbi Escherichia coli K-12 substr. W31109
ECOL199310 ncbi Escherichia coli CFT0739
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10439
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough8
DRED349161 ncbi Desulfotomaculum reducens MI-19
DPSY177439 ncbi Desulfotalea psychrophila LSv548
DOLE96561 ncbi Desulfococcus oleovorans Hxd38
DNOD246195 ncbi Dichelobacter nodosus VCS1703A9
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G209
DARO159087 ncbi Dechloromonas aromatica RCB9
CVIO243365 ncbi Chromobacterium violaceum ATCC 124729
CTET212717 ncbi Clostridium tetani E888
CPHY357809 ncbi Clostridium phytofermentans ISDg9
CPER289380 ncbi Clostridium perfringens SM1019
CPER195103 ncbi Clostridium perfringens ATCC 131249
CPER195102 ncbi Clostridium perfringens 139
CNOV386415 ncbi Clostridium novyi NT9
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF89
CKLU431943 ncbi Clostridium kluyveri DSM 5559
CDIF272563 ncbi Clostridium difficile 6309
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto9
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6579
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B9
CBOT498213 ncbi Clostridium botulinum B1 str. Okra9
CBOT441772 ncbi Clostridium botulinum F str. Langeland9
CBOT441771 ncbi Clostridium botulinum A str. Hall9
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193979
CBOT36826 Clostridium botulinum A9
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80529
CACE272562 ncbi Clostridium acetobutylicum ATCC 8248
BWEI315730 ncbi Bacillus weihenstephanensis KBAB49
BTHU412694 ncbi Bacillus thuringiensis Al Hakam9
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-279
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54829
BLON206672 ncbi Bifidobacterium longum NCC27059
BLIC279010 ncbi Bacillus licheniformis ATCC 145809
BFRA295405 ncbi Bacteroides fragilis YCH469
BFRA272559 ncbi Bacteroides fragilis NCTC 93439
BCER572264 ncbi Bacillus cereus 03BB1029
BCER405917 Bacillus cereus W9
BCER315749 ncbi Bacillus cytotoxicus NVH 391-989
BCER288681 ncbi Bacillus cereus E33L9
BCER226900 ncbi Bacillus cereus ATCC 145799
BANT592021 ncbi Bacillus anthracis A02489
BANT568206 ncbi Bacillus anthracis CDC 6849
BANT261594 ncbi Bacillus anthracis Ames Ancestor9
BANT260799 ncbi Bacillus anthracis Sterne9
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4499
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL039
APLE416269 ncbi Actinobacillus pleuropneumoniae L209
AORE350688 ncbi Alkaliphilus oremlandii OhILAs8
ANAE240017 Actinomyces oris MG18
AMET293826 ncbi Alkaliphilus metalliredigens QYMF9
AMAR329726 ncbi Acaryochloris marina MBIC110179
ALAI441768 ncbi Acholeplasma laidlawii PG-8A9
AHYD196024 Aeromonas hydrophila dhakensis9
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43048


Names of the homologs of the genes in the group in each of these orgs
  G7953   G7627   G6427   G6426   EG11911   EG11910   EG11784   EG10701   EG10028   
ZMOB264203 ZMO1569ZMO1570ZMO1569ZMO1570ZMO1569ZMO1570ZMO1570ZMO1570ZMO1569
YPSE349747 YPSIP31758_2591YPSIP31758_2589YPSIP31758_2591YPSIP31758_2589YPSIP31758_2591YPSIP31758_2589YPSIP31758_1122YPSIP31758_2589YPSIP31758_2591
YPSE273123 YPTB1406YPTB1408YPTB1406YPTB1408YPTB1406YPTB1408YPTB2903YPTB1408YPTB1406
YPES386656 YPDSF_2314YPDSF_2312YPDSF_2314YPDSF_2312YPDSF_2314YPDSF_2312YPDSF_1566YPDSF_2312YPDSF_2314
YPES377628 YPN_2596YPN_2594YPN_2596YPN_2594YPN_2596YPN_2594YPN_1193YPN_2594YPN_2596
YPES360102 YPA_0672YPA_0674YPA_0672YPA_0674YPA_0672YPA_0674YPA_2438YPA_0674YPA_0672
YPES349746 YPANGOLA_A1618YPANGOLA_A1946YPANGOLA_A1618YPANGOLA_A1946YPANGOLA_A1618YPANGOLA_A1946YPANGOLA_A3596YPANGOLA_A1946YPANGOLA_A1618
YPES214092 YPO1381YPO1383YPO1381YPO1383YPO1381YPO1383YPO2705YPO1383YPO1381
YPES187410 Y2792Y2790Y2792Y2790Y2792Y2790Y1282Y2790Y2792
YENT393305 YE0645YE0339YE0645YE0646YE0645YE0646YE1003YE0339YE1531
VVUL216895 VV1_2283VV1_2098VV1_2095VV1_2098VV1_2095VV1_2098VV1_0542VV1_2098VV1_2095
VVUL196600 VV2062VV2342VV2345VV2342VV2345VV2342VV0653VV2342VV2345
VPAR223926 VP1381VP0994VPA1568VPA1567VPA1568VPA1567VP0497VP0994VP0992
VFIS312309 VFA0962VF1590VF1591VF1590VF1591VFA0142VF2115VF1590VF1591
VCHO345073 VC0395_A1460VC0395_A1457VC0395_A1460VC0395_A1457VC0395_A1460VC0395_A1457VC0395_A1940VC0395_A1457VC0395_A1460
VCHO VC1869VC1866VC1869VC1866VC1869VC1866VC2361VC1866VC1869
TTUR377629 TERTU_3983TERTU_0382TERTU_3983TERTU_0382TERTU_3983TERTU_0382TERTU_0382TERTU_0382TERTU_3983
TLET416591 TLET_1142TLET_1141TLET_1142TLET_1141TLET_1142TLET_1141TLET_1141TLET_1142
TKOD69014 TK0290TK0289TK0290TK0289TK0290TK0289TK0289TK0289TK0290
TELO197221 TLR0226TLL0990TLR0226TLL0990TLR0226TLL0990TLL0990TLL0990TLR0226
SWOL335541 SWOL_1049SWOL_1048SWOL_1049SWOL_1048SWOL_1049SWOL_1048SWOL_1048SWOL_1048SWOL_1049
STYP99287 STM4565STM0973STM0844STM0843STM4115STM4114STM2646STM0973STM0970
STHE292459 STH114STH115STH114STH115STH114STH115STH115STH115STH114
SSUI391296 SSU98_0707SSU98_0201SSU98_0707SSU98_0713SSU98_0707SSU98_0713SSU98_0713SSU98_0201SSU98_1678
SSUI391295 SSU05_0705SSU05_0200SSU05_0705SSU05_0714SSU05_0705SSU05_0714SSU05_0714SSU05_0200SSU05_1667
SSP94122 SHEWANA3_1554SHEWANA3_1555SHEWANA3_1554SHEWANA3_1555SHEWANA3_1554SHEWANA3_1555SHEWANA3_1555SHEWANA3_1555SHEWANA3_1554
SSP321332 CYB_0243CYB_0245CYB_0243CYB_0245CYB_0243CYB_0245CYB_0245CYB_0245CYB_0243
SSP321327 CYA_0475CYA_0477CYA_0475CYA_0477CYA_0475CYA_0477CYA_0477CYA_0477CYA_0475
SSON300269 SSO_4530SSO_0904SSO_0806SSO_0805SSO_4125SSO_0805SSO_2705SSO_0904SSO_0903
SSED425104 SSED_0267SSED_1708SSED_1707SSED_1708SSED_1707SSED_1708SSED_1708SSED_1708SSED_1707
SPYO370554 MGAS10750_SPY0312MGAS10750_SPY1628MGAS10750_SPY1843MGAS10750_SPY1837MGAS10750_SPY1843MGAS10750_SPY1837MGAS10750_SPY1837MGAS10750_SPY1628MGAS10750_SPY0312
SPYO370553 MGAS2096_SPY0335MGAS2096_SPY1594MGAS2096_SPY1783MGAS2096_SPY1777MGAS2096_SPY1783MGAS2096_SPY1777MGAS2096_SPY1777MGAS2096_SPY1594MGAS2096_SPY0335
SPYO370552 MGAS10270_SPY0313MGAS10270_SPY1636MGAS10270_SPY1818MGAS10270_SPY1812MGAS10270_SPY1818MGAS10270_SPY1812MGAS10270_SPY1812MGAS10270_SPY1636MGAS10270_SPY0313
SPYO370551 MGAS9429_SPY0317MGAS9429_SPY1574MGAS9429_SPY1759MGAS9429_SPY1753MGAS9429_SPY1759MGAS9429_SPY1753MGAS9429_SPY1752MGAS9429_SPY1574MGAS9429_SPY0317
SPYO319701 M28_SPY0307M28_SPY1557M28_SPY1736M28_SPY1730M28_SPY1736M28_SPY1730M28_SPY1730M28_SPY1557M28_SPY0307
SPYO293653 M5005_SPY0318M5005_SPY1569M5005_SPY1749M5005_SPY1743M5005_SPY1749M5005_SPY1743M5005_SPY1743M5005_SPY1569M5005_SPY0318
SPYO286636 M6_SPY0344M6_SPY1581M6_SPY1749M6_SPY1743M6_SPY1749M6_SPY1743M6_SPY1743M6_SPY1581M6_SPY0344
SPYO198466 SPYM3_0277SPYM3_1596SPYM3_1755SPYM3_1749SPYM3_1755SPYM3_1749SPYM3_1749SPYM3_1596SPYM3_0277
SPYO193567 SPS1582SPS0271SPS1753SPS1747SPS1753SPS1747SPS1747SPS0271SPS1582
SPYO186103 SPYM18_0433SPYM18_1912SPYM18_2117SPYM18_2110SPYM18_2117SPYM18_2110SPYM18_2110SPYM18_1912SPYM18_0433
SPYO160490 SPY0379SPY1849SPY2055SPY2049SPY2055SPY2049SPY2049SPY1849SPY0379
SPRO399741 SPRO_1701SPRO_1702SPRO_2641SPRO_2642SPRO_2641SPRO_2642SPRO_3682SPRO_1702SPRO_1701
SPNE488221 SP70585_0307SP70585_0532SP70585_0307SP70585_0313SP70585_0307SP70585_0313SP70585_0313SP70585_0532SP70585_2048
SPNE487214 SPH_0363SPH_0569SPH_0363SPH_0369SPH_0363SPH_0369SPH_0369SPH_0569SPH_2118
SPNE487213 SPT_0293SPT_0498SPT_0293SPT_0299SPT_0293SPT_0299SPT_0299SPT_0498SPT_1956
SPNE171101 SPR0226SPR0415SPR0226SPR0232SPR0226SPR0232SPR0232SPR0415SPR1791
SPNE170187 SPN08122SPN03101SPN08122SPN08128SPN08122SPN08128SPN08128SPN03101SPN09042
SPNE1313 SPJ_0257SPJ_0444SPJ_0257SPJ_0263SPJ_0257SPJ_0263SPJ_0263SPJ_0444SPJ_1969
SPEA398579 SPEA_3944SPEA_1672SPEA_1671SPEA_1672SPEA_1671SPEA_1672SPEA_1672SPEA_1672SPEA_1671
SONE211586 SO_2408SO_2912SO_2913SO_2912SO_2913SO_2912SO_2912SO_2912SO_2913
SMUT210007 SMU_490SMU_402SMU_490SMU_493SMU_490SMU_493SMU_493SMU_402SMU_1692
SLOI323850 SHEW_2391SHEW_2390SHEW_2391SHEW_2390SHEW_2391SHEW_2390SHEW_2390SHEW_2390SHEW_2391
SHIGELLA YJJWTDCEYBIYYBIWPFLCPFLDYFIDTDCEPFLA
SHAL458817 SHAL_0326SHAL_2592SHAL_2593SHAL_2592SHAL_2593SHAL_2592SHAL_2592SHAL_2592SHAL_2593
SGOR29390 SGO_1794SGO_0247SGO_1794SGO_1788SGO_1794SGO_1788SGO_1788SGO_0247SGO_1649
SGLO343509 SG0987SG0988SG0987SG0988SG0987SG0988SG1796SG0988SG0987
SFLE373384 SFV_4413SFV_0903SFV_0807SFV_0806SFV_4021SFV_4020SFV_2642SFV_0903SFV_0902
SFLE198214 AAN45826.1AAN44625.1AAN42408.1AAN42407.1AAN45459.1AAN45458.1AAN44137.1AAN44625.1AAN42527.1
SEPI176280 SE_0215SE_0214SE_0215SE_0214SE_0215SE_0214SE_0214SE_0214SE_0215
SEPI176279 SERP2365SERP2366SERP2365SERP2366SERP2365SERP2366SERP2366SERP2366SERP2365
SENT454169 SEHA_C4973SEHA_C3536SEHA_C0974SEHA_C0973SEHA_C1068SEHA_C0973SEHA_C2862SEHA_C3536SEHA_C1068
SENT321314 SCH_4413SCH_3187SCH_0839SCH_0838SCH_4005SCH_0838SCH_2651SCH_3187SCH_0924
SENT295319 SPA4379SPA3110SPA1911SPA1912SPA1828SPA1912SPA0272SPA3110SPA1828
SENT220341 STY4916STY0973STY0883STY0882STY0968STY0882STY2839STY0973STY0968
SENT209261 T4608T3161T2045T2046T1964T2046T0264T3161T1964
SDYS300267 SDY_4639SDY_3306SDY_0763SDY_0764SDY_3787SDY_3786SDY_2822SDY_3306SDY_2359
SDEN318161 SDEN_2407SDEN_2406SDEN_2407SDEN_2406SDEN_2407SDEN_2406SDEN_2406SDEN_2406SDEN_2407
SBOY300268 SBO_4440SBO_2979SBO_0714SBO_0713SBO_3971SBO_3970SBO_2611SBO_2979SBO_2188
SBAL402882 SHEW185_2284SHEW185_2690SHEW185_2691SHEW185_2690SHEW185_2691SHEW185_2690SHEW185_2690SHEW185_2690SHEW185_2691
SBAL399599 SBAL195_2401SBAL195_2769SBAL195_2770SBAL195_2769SBAL195_2770SBAL195_2769SBAL195_2769SBAL195_2769SBAL195_2770
SAUR93062 SACOL0205SACOL0204SACOL0205SACOL0204SACOL0205SACOL0204SACOL0204SACOL0204SACOL0205
SAUR93061 SAOUHSC_00188SAOUHSC_00187SAOUHSC_00188SAOUHSC_00187SAOUHSC_00188SAOUHSC_00187SAOUHSC_00187SAOUHSC_00187SAOUHSC_00188
SAUR426430 NWMN_0163NWMN_0162NWMN_0163NWMN_0162NWMN_0163NWMN_0162NWMN_0162NWMN_0162NWMN_0163
SAUR418127 SAHV_0226SAHV_0225SAHV_0226SAHV_0225SAHV_0226SAHV_0225SAHV_0225SAHV_0225SAHV_0226
SAUR367830 SAUSA300_0221SAUSA300_0220SAUSA300_0221SAUSA300_0220SAUSA300_0221SAUSA300_0220SAUSA300_0220SAUSA300_0220SAUSA300_0221
SAUR359787 SAURJH1_0217SAURJH1_0216SAURJH1_0217SAURJH1_0216SAURJH1_0217SAURJH1_0216SAURJH1_0216SAURJH1_0216SAURJH1_0217
SAUR359786 SAURJH9_0211SAURJH9_0210SAURJH9_0211SAURJH9_0210SAURJH9_0211SAURJH9_0210SAURJH9_0210SAURJH9_0210SAURJH9_0211
SAUR282459 SAS0202SAS0201SAS0202SAS0201SAS0202SAS0201SAS0201SAS0201SAS0202
SAUR282458 SAR0218SAR0217SAR0218SAR0217SAR0218SAR0217SAR0217SAR0217SAR0218
SAUR273036 SAB0165SAB0164SAB0165SAB0164SAB0165SAB0164SAB0164SAB0164SAB0165
SAUR196620 MW0202MW0201MW0202MW0201MW0202MW0201MW0201MW0201MW0202
SAUR158879 SA0219SA0218SA0219SA0218SA0219SA0218SA0218SA0218SA0219
SAUR158878 SAV0227SAV0226SAV0227SAV0226SAV0227SAV0226SAV0226SAV0226SAV0227
SAGA211110 GBS0313GBS1772GBS0313GBS0319GBS0313GBS0319GBS0319GBS1772GBS1468
SAGA208435 SAG_0325SAG_1727SAG_0325SAG_0331SAG_0325SAG_0331SAG_0331SAG_1727SAG_1398
SAGA205921 SAK_0395SAK_1735SAK_0395SAK_0401SAK_0395SAK_0401SAK_0401SAK_1735SAK_1431
RRUB269796 RRU_A0916RRU_A3000RRU_A0916RRU_A0903RRU_A0916RRU_A0903RRU_A3000RRU_A3000RRU_A2999
RPAL316056 RPC_1176RPC_2980RPC_1176RPC_1163RPC_1176RPC_1163RPC_2980RPC_2980RPC_2981
RPAL316055 RPE_3102RPE_3101RPE_3102RPE_3101RPE_3102RPE_3101RPE_3101RPE_3101RPE_3102
RALB246199 GRAORF_0667GRAORF_0676GRAORF_0667GRAORF_0676GRAORF_0667GRAORF_0676GRAORF_0674GRAORF_0676GRAORF_0667
PTHE370438 PTH_2421PTH_2436PTH_2421PTH_2436PTH_2421PTH_2436PTH_2436PTH_2421
PRUM264731 GFRORF1244GFRORF1243GFRORF1244GFRORF1243GFRORF1536GFRORF1537GFRORF1243GFRORF1243GFRORF1244
PPRO298386 PBPRA2007PBPRA2750PBPRA2752PBPRA2750PBPRA2752PBPRA2750PBPRA0556PBPRA2750PBPRA2752
PMUL272843 PM0077PM0075PM0077PM0075PM0077PM0075PM0064PM0075PM0077
PLUM243265 PLU1612PLU1613PLU1612PLU1613PLU1612PLU1613PLU1613PLU1613PLU1612
PINT246198 PIN_0435PIN_0437PIN_0435PIN_0437PIN_0435PIN_0437PIN_0437PIN_0437PIN_0435
PING357804 PING_3308PING_3307PING_3308PING_3307PING_3308PING_3307PING_1281PING_3307PING_3308
PDIS435591 BDI_0787BDI_3392BDI_1866BDI_0786BDI_1866BDI_0786BDI_3392BDI_3392BDI_3393
PCAR338963 PCAR_1396PCAR_1397PCAR_1396PCAR_1397PCAR_0943PCAR_1397PCAR_1397PCAR_1397PCAR_1396
NHAM323097 NHAM_0890NHAM_0889NHAM_0890NHAM_0889NHAM_0890NHAM_0889NHAM_0889NHAM_0889NHAM_0890
MSUC221988 MS0403MS0401MS0403MS0401MS0403MS0401MS0372MS0401MS0403
LWEL386043 LWE1423LWE1422LWE1423LWE1422LWE1423LWE1422LWE1422LWE1422LWE1423
LSAK314315 LSA0973LSA0974LSA0973LSA0974LSA0973LSA0974LSA0974LSA0974LSA0973
LPLA220668 LP_2596LP_3313LP_2596LP_2598LP_2596LP_2598LP_3313LP_3313LP_3314
LMON265669 LMOF2365_1426LMOF2365_1946LMOF2365_1426LMOF2365_1425LMOF2365_1426LMOF2365_1425LMOF2365_1425LMOF2365_1946LMOF2365_1426
LMON169963 LMO1407LMO1917LMO1407LMO1406LMO1407LMO1406LMO1406LMO1917LMO1407
LINN272626 LIN1444LIN2031LIN1444LIN1443LIN1444LIN1443LIN1443LIN2031LIN1444
LCAS321967 LSEI_1412LSEI_1410LSEI_1412LSEI_1410LSEI_1412LSEI_1410LSEI_1410LSEI_1410LSEI_1412
KPNE272620 GKPORF_B4136GKPORF_B1429GKPORF_B5293GKPORF_B5292GKPORF_B5445GKPORF_B5446GKPORF_B2234GKPORF_B1429GKPORF_B5372
HSOM228400 HSM_1029HSM_1041HSM_1029HSM_1041HSM_1029HSM_1041HSM_1791HSM_1041HSM_1029
HSOM205914 HS_1147HS_1136HS_1147HS_1136HS_1147HS_1136HS_0480HS_1136HS_1147
HINF71421 HI_0179HI_0180HI_0179HI_0180HI_0179HI_0180HI_0017HI_0180HI_0179
HINF281310 NTHI0268NTHI0269NTHI0268NTHI0269NTHI0268NTHI0269NTHI0022NTHI0269NTHI0268
HDUC233412 HD_0989HD_0990HD_0989HD_0990HD_0989HD_0990HD_1064HD_0990HD_0989
FSUC59374 FSU1499FSU1495FSU1499FSU1495FSU1499FSU1495FSU1495FSU1495FSU1499
FNUC190304 FN0261FN0262FN0261FN0262FN0261FN0262FN0262FN0262FN0261
FMAG334413 FMG_1494FMG_1495FMG_1494FMG_1495FMG_1494FMG_1495FMG_1495FMG_1495FMG_1494
ESP42895 ENT638_0539ENT638_1423ENT638_1318ENT638_1317ENT638_1422ENT638_1317ENT638_3064ENT638_1423ENT638_1422
EFER585054 EFER_4476EFER_1048EFER_0966EFER_0965EFER_3811EFER_3812EFER_0495EFER_1048EFER_1047
EFAE226185 EF_1612EF_1613EF_1612EF_1613EF_1612EF_1613EF_1613EF_1613EF_1612
ECOO157 YJJWTDCEYBIYZ1045PFLCPFLDYFIDTDCEPFLA
ECOL83334 ECS5337ECS0986ECS0902ECS0900ECS4881ECS4880ECS3445ECS0986ECS0985
ECOL585397 ECED1_5250ECED1_0930ECED1_0788ECED1_0787ECED1_4657ECED1_3461ECED1_3010ECED1_0930ECED1_0929
ECOL585057 ECIAI39_4910ECIAI39_3615ECIAI39_0801ECIAI39_0800ECIAI39_3037ECIAI39_3038ECIAI39_2787ECIAI39_3615ECIAI39_2246
ECOL585056 ECUMN_5003ECUMN_3598ECUMN_1012ECUMN_1011ECUMN_4483ECUMN_4482ECUMN_2904ECUMN_3598ECUMN_1095
ECOL585055 EC55989_5041EC55989_3531EC55989_0869EC55989_0868EC55989_4434EC55989_4433EC55989_2868EC55989_3531EC55989_0947
ECOL585035 ECS88_5060ECS88_3507ECS88_0841ECS88_0840ECS88_4407ECS88_4672ECS88_2753ECS88_3507ECS88_0930
ECOL585034 ECIAI1_4602ECIAI1_3263ECIAI1_0863ECIAI1_0862ECIAI1_4160ECIAI1_4159ECIAI1_2696ECIAI1_3263ECIAI1_0942
ECOL481805 ECOLC_3677ECOLC_2693ECOLC_2820ECOLC_2821ECOLC_4064ECOLC_4065ECOLC_1098ECOLC_2693ECOLC_2694
ECOL469008 ECBD_3641ECBD_0626ECBD_2799ECBD_2800ECBD_4072ECBD_4073ECBD_1101ECBD_0626ECBD_2693
ECOL439855 ECSMS35_4927ECSMS35_3410ECSMS35_0849ECSMS35_0848ECSMS35_4399ECSMS35_4398ECSMS35_2732ECSMS35_3410ECSMS35_2219
ECOL413997 ECB_04255ECB_02981ECB_00791ECB_00790ECB_03837ECB_03836ECB_02473ECB_02981ECB_00906
ECOL409438 ECSE_4654ECSE_3398ECSE_0882ECSE_0881ECSE_4245ECSE_4244ECSE_2868ECSE_3398ECSE_0961
ECOL405955 APECO1_2002APECO1_15APECO1_1269APECO1_1270APECO1_2515APECO1_2293APECO1_3953APECO1_15APECO1_1190
ECOL364106 UTI89_C5149UTI89_C3549UTI89_C0827UTI89_C0826UTI89_C4543UTI89_C4542UTI89_C2901UTI89_C3549UTI89_C0973
ECOL362663 ECP_4763ECP_3207ECP_0837ECP_0836ECP_4165ECP_4164ECP_2581ECP_3207ECP_0913
ECOL331111 ECE24377A_4977ECE24377A_1000ECE24377A_0895ECE24377A_0894ECE24377A_4491ECE24377A_4490ECE24377A_2866ECE24377A_1000ECE24377A_0980
ECOL316407 ECK4371:JW4342:B4379ECK3103:JW5522:B3114ECK0814:JW0808:B0824ECK0813:JW0807:B0823ECK3943:JW3924:B3952ECK3942:JW3923:B3951ECK2577:JW2563:B2579ECK3103:JW5522:B3114ECK0893:JW0885:B0902
ECOL199310 C5462C3872C0909C0908C4911C4910C3103C3872C1038
ECAR218491 ECA3769ECA2597ECA3769ECA3768ECA3769ECA3768ECA3288ECA2597ECA3769
DVUL882 DVU_2271DVU_2824DVU_2825DVU_2824DVU_2825DVU_2272DVU_2824DVU_2825
DRED349161 DRED_2966DRED_0039DRED_2752DRED_2750DRED_2966DRED_2965DRED_0039DRED_0039DRED_0038
DPSY177439 DP1824DP0616DP3026DP3027DP3026DP0616DP0616DP1824
DOLE96561 DOLE_2192DOLE_2191DOLE_2192DOLE_0906DOLE_2192DOLE_0906DOLE_2191DOLE_2192
DNOD246195 DNO_1333DNO_1334DNO_1333DNO_1334DNO_1333DNO_1334DNO_1334DNO_1334DNO_1333
DHAF138119 DSY3009DSY5006DSY0417DSY0416DSY5005DSY0416DSY0416DSY0417
DDES207559 DDE_3054DDE_3039DDE_1272DDE_1273DDE_3281DDE_1273DDE_1273DDE_3282DDE_3281
DARO159087 DARO_2097DARO_2096DARO_2097DARO_2096DARO_2097DARO_2096DARO_2096DARO_2096DARO_2097
CVIO243365 CV_1413CV_1412CV_1413CV_1412CV_1413CV_1412CV_1412CV_1412CV_1413
CTET212717 CTC_00937CTC_01449CTC_00937CTC_00936CTC_00937CTC_00936CTC_00936CTC_00937
CPHY357809 CPHY_1418CPHY_2823CPHY_1418CPHY_1174CPHY_1175CPHY_1174CPHY_2821CPHY_2823CPHY_2820
CPER289380 CPR_0637CPR_1169CPR_1170CPR_1169CPR_1170CPR_1169CPR_1169CPR_1169CPR_1170
CPER195103 CPF_0641CPF_1356CPF_1357CPF_1356CPF_1357CPF_1356CPF_1356CPF_1356CPF_1357
CPER195102 CPE0660CPE1153CPE1154CPE1153CPE1154CPE1153CPE1153CPE1153CPE1154
CNOV386415 NT01CX_1221NT01CX_0015NT01CX_1221NT01CX_0498NT01CX_1221NT01CX_1220NT01CX_0015NT01CX_0015NT01CX_0016
CKOR374847 KCR_0518KCR_0517KCR_0518KCR_0517KCR_0518KCR_0517KCR_0517KCR_0517KCR_0518
CKLU431943 CKL_3001CKL_1107CKL_0322CKL_0323CKL_0322CKL_3002CKL_1107CKL_1107CKL_1106
CDIF272563 CD3283CD0759CD3283CD1120CD0155CD1120CD0759CD0759CD0758
CBOT536232 CLM_4072CLM_3627CLM_2325CLM_2326CLM_3596CLM_3595CLM_3627CLM_3627CLM_3626
CBOT515621 CLJ_B3909CLJ_B3488CLJ_B2321CLJ_B2322CLJ_B3456CLJ_B3455CLJ_B3488CLJ_B3488CLJ_B3487
CBOT508765 CLL_A1512CLL_A2573CLL_A1840CLL_A1513CLL_A1512CLL_A1841CLL_A2573CLL_A2573CLL_A2572
CBOT498213 CLD_0906CLD_1316CLD_2524CLD_2523CLD_2524CLD_1348CLD_1316CLD_1316CLD_1317
CBOT441772 CLI_3805CLI_3354CLI_2160CLI_2161CLI_3323CLI_3322CLI_3354CLI_3354CLI_3353
CBOT441771 CLC_3558CLC_3126CLC_2059CLC_2060CLC_2059CLC_3093CLC_3126CLC_3126CLC_3125
CBOT441770 CLB_3660CLB_3252CLB_2054CLB_2055CLB_2054CLB_3219CLB_3252CLB_3252CLB_3251
CBOT36826 CBO3579CBO3216CBO2117CBO2118CBO2117CBO3183CBO3216CBO3216CBO3215
CBEI290402 CBEI_4060CBEI_1011CBEI_0316CBEI_0705CBEI_0316CBEI_4061CBEI_1011CBEI_1011CBEI_1010
CACE272562 CAC0980CAC0981CAC0980CAC0981CAC0980CAC0980CAC0980CAC0981
BWEI315730 BCERKBAB4_0427BCERKBAB4_0426BCERKBAB4_0427BCERKBAB4_0426BCERKBAB4_0427BCERKBAB4_0426BCERKBAB4_0426BCERKBAB4_0426BCERKBAB4_0427
BTHU412694 BALH_0447BALH_0446BALH_0447BALH_0446BALH_0447BALH_0446BALH_0446BALH_0446BALH_0447
BTHU281309 BT9727_0425BT9727_0424BT9727_0425BT9727_0424BT9727_0425BT9727_0424BT9727_0424BT9727_0424BT9727_0425
BTHE226186 BT_2956BT_4738BT_2956BT_4738BT_2956BT_2955BT_4738BT_4738BT_4737
BLON206672 BL0950BL0951BL0950BL0951BL0950BL0951BL0951BL0951BL0950
BLIC279010 BL01864BL01863BL01864BL01863BL01864BL01863BL01863BL01863BL01864
BFRA295405 BF1338BF1339BF4382BF4383BF4382BF4383BF1339BF1339BF1338
BFRA272559 BF1322BF1323BF4180BF4181BF4180BF4181BF1323BF1323BF1322
BCER572264 BCA_0529BCA_0528BCA_0529BCA_0528BCA_0529BCA_0528BCA_0528BCA_0528BCA_0529
BCER405917 BCE_0564BCE_0563BCE_0564BCE_0563BCE_0564BCE_0563BCE_0563BCE_0563BCE_0564
BCER315749 BCER98_0432BCER98_0431BCER98_0432BCER98_0431BCER98_0432BCER98_0431BCER98_0431BCER98_0431BCER98_0432
BCER288681 BCE33L0421BCE33L0420BCE33L0421BCE33L0420BCE33L0421BCE33L0420BCE33L0420BCE33L0420BCE33L0421
BCER226900 BC_0492BC_0491BC_0492BC_0491BC_0492BC_0491BC_0491BC_0491BC_0492
BANT592021 BAA_0571BAA_0570BAA_0571BAA_0570BAA_0571BAA_0570BAA_0570BAA_0570BAA_0571
BANT568206 BAMEG_4096BAMEG_4097BAMEG_4096BAMEG_4097BAMEG_4096BAMEG_4097BAMEG_4097BAMEG_4097BAMEG_4096
BANT261594 GBAA0510GBAA0509GBAA0510GBAA0509GBAA0510GBAA0509GBAA0509GBAA0509GBAA0510
BANT260799 BAS0482BAS0481BAS0482BAS0481BAS0482BAS0481BAS0481BAS0481BAS0482
ASAL382245 ASA_0621ASA_2352ASA_2671ASA_2352ASA_2671ASA_2352ASA_1181ASA_2352ASA_2671
APLE434271 APJL_1053APJL_1054APJL_1053APJL_1054APJL_1053APJL_1054APJL_0379APJL_1054APJL_1053
APLE416269 APL_1035APL_1036APL_1035APL_1036APL_1035APL_1036APL_0361APL_1036APL_1035
AORE350688 CLOS_0963CLOS_2688CLOS_2397CLOS_2688CLOS_2687CLOS_2688CLOS_2688CLOS_2397
ANAE240017 ANA_0888ANA_0886ANA_0888ANA_0886ANA_0888ANA_0887ANA_0888ANA_0886
AMET293826 AMET_3586AMET_2211AMET_3835AMET_0506AMET_0507AMET_0506AMET_2211AMET_2211AMET_2210
AMAR329726 AM1_0441AM1_0439AM1_0441AM1_0439AM1_0441AM1_0439AM1_0439AM1_0439AM1_0441
ALAI441768 ACL_0029ACL_0028ACL_0029ACL_0028ACL_0029ACL_0028ACL_0028ACL_0028ACL_0029
AHYD196024 AHA_0621AHA_1941AHA_2855AHA_2856AHA_2855AHA_2856AHA_3143AHA_1941AHA_1689
AFUL224325 AF_1450AF_1449AF_1450AF_1449AF_1450AF_1449AF_1449AF_1450


Organism features enriched in list (features available for 184 out of the 195 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 3.654e-115792
Arrangment:Clusters 0.00001601417
Arrangment:Pairs 3.048e-1470112
Disease:Anthrax 0.009701144
Disease:Botulism 0.003015955
Disease:Bubonic_plague 0.000934066
Disease:Dysentery 0.000934066
Disease:Gastroenteritis 0.00079601013
Disease:Pneumonia 0.00002101112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 2.509e-61111
Disease:Urinary_tract_infection 0.009701144
Disease:Wide_range_of_infections 2.509e-61111
Disease:endocarditis 0.009701144
Endospores:Yes 0.00001433153
GC_Content_Range4:0-40 0.006978179213
GC_Content_Range4:40-60 4.159e-695224
GC_Content_Range4:60-100 8.657e-179145
GC_Content_Range7:30-40 0.005866064166
GC_Content_Range7:40-50 0.001451050117
GC_Content_Range7:50-60 0.003523045107
GC_Content_Range7:60-70 1.033e-149134
Genome_Size_Range5:0-2 2.299e-921155
Genome_Size_Range5:4-6 2.220e-1295184
Genome_Size_Range5:6-10 0.0000163347
Genome_Size_Range9:1-2 7.518e-621128
Genome_Size_Range9:4-5 6.813e-64996
Genome_Size_Range9:5-6 6.091e-64688
Genome_Size_Range9:6-8 0.0000552238
Gram_Stain:Gram_Pos 2.078e-977150
Habitat:Aquatic 0.00128841791
Habitat:Multiple 0.003695269178
Optimal_temp.:- 0.009812670257
Optimal_temp.:30-35 0.004521067
Optimal_temp.:30-37 4.615e-71618
Optimal_temp.:37 0.000811647106
Oxygen_Req:Aerobic 2.004e-268185
Oxygen_Req:Anaerobic 0.002255844102
Oxygen_Req:Facultative 2.377e-30125201
Pathogenic_in:Human 2.115e-13107213
Pathogenic_in:No 4.691e-745226
Salinity:Non-halophilic 0.005048244106
Shape:Coccus 0.00046123982
Shape:Rod 0.0000646130347
Shape:Spiral 0.0002219234
Temp._range:Mesophilic 0.0002430164473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 411
Effective number of orgs (counting one per cluster within 468 clusters): 340

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H160
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30000
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PSP117 Pirellula sp.0
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU220664 ncbi Pseudomonas fluorescens Pf-50
PFLU216595 ncbi Pseudomonas fluorescens SBW250
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO10
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP409 Methylobacterium sp.0
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GOXY290633 ncbi Gluconobacter oxydans 621H0
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRAD243230 ncbi Deinococcus radiodurans R10
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BVIE269482 ncbi Burkholderia vietnamiensis G40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHA271848 ncbi Burkholderia thailandensis E2640
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP376 Bradyrhizobium sp.0
BSP36773 Burkholderia sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCEN331272 ncbi Burkholderia cenocepacia HI24240
BCEN331271 ncbi Burkholderia cenocepacia AU 10540
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAMB398577 ncbi Burkholderia ambifaria MC40-60
BAMB339670 ncbi Burkholderia ambifaria AMMD0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7953   G7627   G6427   G6426   EG11911   EG11910   EG11784   EG10701   EG10028   
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TFUS269800
TERY203124
TDEN326298
TDEN292415 TBD_1585
TDEN243275
TCRU317025
TACI273075
STRO369723
STOK273063
SSP84588
SSP64471
SSP644076
SSP387093
SSP292414
SSP1148
SSP1131
SSOL273057
SSAP342451
SRUB309807
SMEL266834
SMED366394
SMAR399550
SLAC55218
SHAE279808
SFUM335543 SFUM_0354
SERY405948
SELO269084
SDEG203122
SCO
SAVE227882
SARE391037
SALA317655
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL258594
RMET266264
RMAS416276
RLEG216596
RFER338969
RFEL315456
REUT381666
REUT264198
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PSYR223283
PSYR205918
PSTU379731
PSP56811
PSP312153
PSP296591
PSP117
PPUT76869
PPUT351746
PPUT160488
PPEN278197
PNAP365044
PMOB403833
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PHOR70601 PH1391
PHAL326442
PGIN242619
PFUR186497
PFLU220664
PFLU216595
PFLU205922
PENT384676
PCRY335284
PATL342610
PAST100379
PARS340102
PARC259536
PAER208964
PAER208963
PAER178306
PACN267747 PPA2136
PABY272844
OTSU357244
OIHE221109
OCAR504832
OANT439375
NWIN323098
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197 MXAN_2901
MVAN350058
MTUB419947
MTUB336982
MTHE264732
MTBRV
MTBCDC
MSYN262723
MSTA339860 MSP_1324
MSP409
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2581
MMAR444158 MMARC6_0313
MMAR426368 MMARC7_1601
MMAR402880
MMAR394221
MMAR368407 MEMAR_0463
MMAR267377
MMAG342108
MLOT266835
MLEP272631
MLAB410358
MKAN190192 MK0047
MJAN243232 MJ_1227
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LSPH444177
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
JSP375286
JSP290400
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HHEP235279
HHAL349124
HCHE349521
HBUT415426
HAUR316274
HARS204773
HACI382638
GURA351605
GTHE420246
GOXY290633
GKAU235909
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSP1855
FSP106370
FRANT
FPHI484022
FNOD381764
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DSP255470
DSP216389
DSHI398580
DRAD243230
DGEO319795
DETH243164
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CSP501479
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BXEN266265
BVIE269482
BTUR314724
BTRI382640
BTHA271848
BSUI470137
BSUI204722
BSUB
BSP376
BSP36773
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPSE272560
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389
BMAL320388
BMAL243160
BJAP224911
BHER314723
BHEN283166
BHAL272558
BGAR290434
BCLA66692
BCIC186490
BCEN331272
BCEN331271
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAMY326423
BAMB398577
BAMB339670
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP62977
ASP62928
ASP232721
ASP1667 ARTH_1019
APHA212042
APER272557
AMAR234826
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669
AAVE397945
AAUR290340
AAEO224324


Organism features enriched in list (features available for 383 out of the 411 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.185e-123092
Arrangment:Clusters 0.0000475317
Arrangment:Pairs 4.255e-1636112
Disease:Gastroenteritis 0.0016534313
Disease:Pneumonia 0.0000517112
Disease:meningitis 0.007204817
Endospores:Yes 0.00009412253
GC_Content_Range4:0-40 0.0070833128213
GC_Content_Range4:40-60 6.681e-6123224
GC_Content_Range4:60-100 1.278e-15132145
GC_Content_Range7:30-40 0.003321596166
GC_Content_Range7:40-50 0.003284865117
GC_Content_Range7:50-60 0.002116758107
GC_Content_Range7:60-70 1.791e-13121134
GC_Content_Range7:70-100 0.00935641111
Genome_Size_Range5:0-2 5.062e-8128155
Genome_Size_Range5:4-6 5.348e-1284184
Genome_Size_Range5:6-10 3.109e-64447
Genome_Size_Range9:0-1 8.537e-62727
Genome_Size_Range9:1-2 0.0001118101128
Genome_Size_Range9:4-5 2.251e-64396
Genome_Size_Range9:5-6 0.00003164188
Genome_Size_Range9:6-8 0.00001393638
Gram_Stain:Gram_Neg 0.0046745232333
Gram_Stain:Gram_Pos 1.169e-1066150
Habitat:Aquatic 0.00108097291
Habitat:Multiple 0.0008482101178
Optimal_temp.:- 0.0031497183257
Optimal_temp.:30-35 0.007204817
Optimal_temp.:30-37 1.706e-6218
Optimal_temp.:37 0.000883756106
Oxygen_Req:Aerobic 7.668e-28175185
Oxygen_Req:Anaerobic 0.000135051102
Oxygen_Req:Facultative 8.416e-3070201
Pathogenic_in:Human 6.263e-11104213
Pathogenic_in:No 0.0000375170226
Salinity:Non-halophilic 0.005256859106
Shape:Coccus 0.00005103882
Shape:Rod 0.0002290209347
Shape:Spiral 0.00006703234
Temp._range:Mesophilic 0.0013999298473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 90
Effective number of orgs (counting one per cluster within 468 clusters): 53

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF8 3.343e-83549
ALAI441768 ncbi Acholeplasma laidlawii PG-8A 1.960e-74309
TKOD69014 ncbi Thermococcus kodakarensis KOD1 4.147e-74679
PINT246198 Prevotella intermedia 17 2.915e-65799
BLON206672 ncbi Bifidobacterium longum NCC2705 3.352e-65889
FMAG334413 ncbi Finegoldia magna ATCC 29328 6.084e-66289
RALB246199 Ruminococcus albus 8 9.543e-66609
SPYO370553 ncbi Streptococcus pyogenes MGAS2096 0.00001346859
SPYO193567 ncbi Streptococcus pyogenes SSI-1 0.00001436909
SPYO198466 ncbi Streptococcus pyogenes MGAS315 0.00001677029
SPYO370551 ncbi Streptococcus pyogenes MGAS9429 0.00001737059
SPYO160490 ncbi Streptococcus pyogenes M1 GAS 0.00001877119
SPYO186103 ncbi Streptococcus pyogenes MGAS8232 0.00001877119
SPYO293653 ncbi Streptococcus pyogenes MGAS5005 0.00001977159
SPYO286636 ncbi Streptococcus pyogenes MGAS10394 0.00002057189
SPYO370554 ncbi Streptococcus pyogenes MGAS10750 0.00002267269
SPYO319701 ncbi Streptococcus pyogenes MGAS6180 0.00002297279
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S85 0.00002387309
SPYO370552 ncbi Streptococcus pyogenes MGAS10270 0.00002477339
PRUM264731 ncbi Prevotella ruminicola 23 0.00002797439
SSUI391295 ncbi Streptococcus suis 05ZYH33 0.00002897469
SPNE170187 ncbi Streptococcus pneumoniae G54 0.00003727679
SSUI391296 ncbi Streptococcus suis 98HAH33 0.00004437829
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-14 0.00004487839
SPNE1313 Streptococcus pneumoniae 0.00004807899
SPNE171101 ncbi Streptococcus pneumoniae R6 0.00005037939
SMUT210007 ncbi Streptococcus mutans UA159 0.00005087949
SPNE488221 ncbi Streptococcus pneumoniae 70585 0.00005327989
AFUL224325 ncbi Archaeoglobus fulgidus DSM 4304 0.00005424968
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-6 0.00005768059
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 25586 0.00006808209
SGOR29390 Streptococcus gordonii Challis 0.00007038239
LSAK314315 ncbi Lactobacillus sakei sakei 23K 0.00008838449
SAGA211110 ncbi Streptococcus agalactiae NEM316 0.00011158669
SAGA208435 ncbi Streptococcus agalactiae 2603V/R 0.00011508699
SAGA205921 ncbi Streptococcus agalactiae A909 0.00011628709
TELO197221 ncbi Thermosynechococcus elongatus BP-1 0.00012118749
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.00025509499
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.00025749509
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.00025999519
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13) 0.00027779589
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen 0.00030509689
BFRA295405 ncbi Bacteroides fragilis YCH46 0.00037719919
BFRA272559 ncbi Bacteroides fragilis NCTC 9343 0.00038409939
PDIS435591 ncbi Parabacteroides distasonis ATCC 8503 0.000431910069
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM4 0.000455810129
LPLA220668 ncbi Lactobacillus plantarum WCFS1 0.000507010249
SEPI176280 ncbi Staphylococcus epidermidis ATCC 12228 0.000516010269
SEPI176279 ncbi Staphylococcus epidermidis RP62A 0.000583210409
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-5482 0.000583210409
SAUR273036 ncbi Staphylococcus aureus RF122 0.000834010829
CNOV386415 ncbi Clostridium novyi NT 0.000884010899
SAUR367830 Staphylococcus aureus aureus USA300 0.001008511059
SAUR93062 ncbi Staphylococcus aureus aureus COL 0.001033511089
SAUR426430 ncbi Staphylococcus aureus aureus Newman 0.001041911099
SAUR282459 ncbi Staphylococcus aureus aureus MSSA476 0.001085211149
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 8325 0.001094011159
SAUR359786 ncbi Staphylococcus aureus aureus JH9 0.001094011159
SAUR418127 ncbi Staphylococcus aureus aureus Mu3 0.001120911189
SAUR359787 ncbi Staphylococcus aureus aureus JH1 0.001130011199
SAUR158879 ncbi Staphylococcus aureus aureus N315 0.001157611229
SAUR282458 ncbi Staphylococcus aureus aureus MRSA252 0.001157611229
SAUR196620 ncbi Staphylococcus aureus aureus MW2 0.001167011239
SAUR158878 ncbi Staphylococcus aureus aureus Mu50 0.001176411249
CKLU431943 ncbi Clostridium kluyveri DSM 555 0.001195411269
CPER289380 ncbi Clostridium perfringens SM101 0.001244211319
EFAE226185 ncbi Enterococcus faecalis V583 0.001469111529
ANAE240017 Actinomyces oris MG1 0.00159567608
CPHY357809 ncbi Clostridium phytofermentans ISDg 0.001600811639
CPER195102 ncbi Clostridium perfringens 13 0.002076611979
CPER195103 ncbi Clostridium perfringens ATCC 13124 0.002341112139
TLET416591 ncbi Thermotoga lettingae TMO 0.00236697998
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B 0.003026712489
AMAR329726 ncbi Acaryochloris marina MBIC11017 0.003206512569
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC5334 0.003493912689
CBOT441771 ncbi Clostridium botulinum A str. Hall 0.003912712849
CBOT441772 ncbi Clostridium botulinum F str. Langeland 0.004024112889
LMON265669 ncbi Listeria monocytogenes 4b F2365 0.004138412929
LINN272626 ncbi Listeria innocua Clip11262 0.004138412929
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G20 0.004436713029
LMON169963 ncbi Listeria monocytogenes EGD-e 0.004467613039
CBOT36826 Clostridium botulinum A 0.004529913059
CBOT441770 ncbi Clostridium botulinum A str. ATCC 19397 0.004592913079
CDIF272563 ncbi Clostridium difficile 630 0.004721413119
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto 0.005022213209
CBOT498213 ncbi Clostridium botulinum B1 str. Okra 0.005196513259
CBOT515621 ncbi Clostridium botulinum Ba4 str. 657 0.005524013349
NHAM323097 ncbi Nitrobacter hamburgensis X14 0.005713713399
HDUC233412 ncbi Haemophilus ducreyi 35000HP 0.006402913569
DRED349161 ncbi Desulfotomaculum reducens MI-1 0.007118113729


Names of the homologs of the genes in the group in each of these orgs
  G7953   G7627   G6427   G6426   EG11911   EG11910   EG11784   EG10701   EG10028   
CKOR374847 KCR_0518KCR_0517KCR_0518KCR_0517KCR_0518KCR_0517KCR_0517KCR_0517KCR_0518
ALAI441768 ACL_0029ACL_0028ACL_0029ACL_0028ACL_0029ACL_0028ACL_0028ACL_0028ACL_0029
TKOD69014 TK0290TK0289TK0290TK0289TK0290TK0289TK0289TK0289TK0290
PINT246198 PIN_0435PIN_0437PIN_0435PIN_0437PIN_0435PIN_0437PIN_0437PIN_0437PIN_0435
BLON206672 BL0950BL0951BL0950BL0951BL0950BL0951BL0951BL0951BL0950
FMAG334413 FMG_1494FMG_1495FMG_1494FMG_1495FMG_1494FMG_1495FMG_1495FMG_1495FMG_1494
RALB246199 GRAORF_0667GRAORF_0676GRAORF_0667GRAORF_0676GRAORF_0667GRAORF_0676GRAORF_0674GRAORF_0676GRAORF_0667
SPYO370553 MGAS2096_SPY0335MGAS2096_SPY1594MGAS2096_SPY1783MGAS2096_SPY1777MGAS2096_SPY1783MGAS2096_SPY1777MGAS2096_SPY1777MGAS2096_SPY1594MGAS2096_SPY0335
SPYO193567 SPS1582SPS0271SPS1753SPS1747SPS1753SPS1747SPS1747SPS0271SPS1582
SPYO198466 SPYM3_0277SPYM3_1596SPYM3_1755SPYM3_1749SPYM3_1755SPYM3_1749SPYM3_1749SPYM3_1596SPYM3_0277
SPYO370551 MGAS9429_SPY0317MGAS9429_SPY1574MGAS9429_SPY1759MGAS9429_SPY1753MGAS9429_SPY1759MGAS9429_SPY1753MGAS9429_SPY1752MGAS9429_SPY1574MGAS9429_SPY0317
SPYO160490 SPY0379SPY1849SPY2055SPY2049SPY2055SPY2049SPY2049SPY1849SPY0379
SPYO186103 SPYM18_0433SPYM18_1912SPYM18_2117SPYM18_2110SPYM18_2117SPYM18_2110SPYM18_2110SPYM18_1912SPYM18_0433
SPYO293653 M5005_SPY0318M5005_SPY1569M5005_SPY1749M5005_SPY1743M5005_SPY1749M5005_SPY1743M5005_SPY1743M5005_SPY1569M5005_SPY0318
SPYO286636 M6_SPY0344M6_SPY1581M6_SPY1749M6_SPY1743M6_SPY1749M6_SPY1743M6_SPY1743M6_SPY1581M6_SPY0344
SPYO370554 MGAS10750_SPY0312MGAS10750_SPY1628MGAS10750_SPY1843MGAS10750_SPY1837MGAS10750_SPY1843MGAS10750_SPY1837MGAS10750_SPY1837MGAS10750_SPY1628MGAS10750_SPY0312
SPYO319701 M28_SPY0307M28_SPY1557M28_SPY1736M28_SPY1730M28_SPY1736M28_SPY1730M28_SPY1730M28_SPY1557M28_SPY0307
FSUC59374 FSU1499FSU1495FSU1499FSU1495FSU1499FSU1495FSU1495FSU1495FSU1499
SPYO370552 MGAS10270_SPY0313MGAS10270_SPY1636MGAS10270_SPY1818MGAS10270_SPY1812MGAS10270_SPY1818MGAS10270_SPY1812MGAS10270_SPY1812MGAS10270_SPY1636MGAS10270_SPY0313
PRUM264731 GFRORF1244GFRORF1243GFRORF1244GFRORF1243GFRORF1536GFRORF1537GFRORF1243GFRORF1243GFRORF1244
SSUI391295 SSU05_0705SSU05_0200SSU05_0705SSU05_0714SSU05_0705SSU05_0714SSU05_0714SSU05_0200SSU05_1667
SPNE170187 SPN08122SPN03101SPN08122SPN08128SPN08122SPN08128SPN08128SPN03101SPN09042
SSUI391296 SSU98_0707SSU98_0201SSU98_0707SSU98_0713SSU98_0707SSU98_0713SSU98_0713SSU98_0201SSU98_1678
SPNE487213 SPT_0293SPT_0498SPT_0293SPT_0299SPT_0293SPT_0299SPT_0299SPT_0498SPT_1956
SPNE1313 SPJ_0257SPJ_0444SPJ_0257SPJ_0263SPJ_0257SPJ_0263SPJ_0263SPJ_0444SPJ_1969
SPNE171101 SPR0226SPR0415SPR0226SPR0232SPR0226SPR0232SPR0232SPR0415SPR1791
SMUT210007 SMU_490SMU_402SMU_490SMU_493SMU_490SMU_493SMU_493SMU_402SMU_1692
SPNE488221 SP70585_0307SP70585_0532SP70585_0307SP70585_0313SP70585_0307SP70585_0313SP70585_0313SP70585_0532SP70585_2048
AFUL224325 AF_1450AF_1449AF_1450AF_1449AF_1450AF_1449AF_1449AF_1450
SPNE487214 SPH_0363SPH_0569SPH_0363SPH_0369SPH_0363SPH_0369SPH_0369SPH_0569SPH_2118
FNUC190304 FN0261FN0262FN0261FN0262FN0261FN0262FN0262FN0262FN0261
SGOR29390 SGO_1794SGO_0247SGO_1794SGO_1788SGO_1794SGO_1788SGO_1788SGO_0247SGO_1649
LSAK314315 LSA0973LSA0974LSA0973LSA0974LSA0973LSA0974LSA0974LSA0974LSA0973
SAGA211110 GBS0313GBS1772GBS0313GBS0319GBS0313GBS0319GBS0319GBS1772GBS1468
SAGA208435 SAG_0325SAG_1727SAG_0325SAG_0331SAG_0325SAG_0331SAG_0331SAG_1727SAG_1398
SAGA205921 SAK_0395SAK_1735SAK_0395SAK_0401SAK_0395SAK_0401SAK_0401SAK_1735SAK_1431
TELO197221 TLR0226TLL0990TLR0226TLL0990TLR0226TLL0990TLL0990TLL0990TLR0226
DNOD246195 DNO_1333DNO_1334DNO_1333DNO_1334DNO_1333DNO_1334DNO_1334DNO_1334DNO_1333
SSP321327 CYA_0475CYA_0477CYA_0475CYA_0477CYA_0475CYA_0477CYA_0477CYA_0477CYA_0475
LCAS321967 LSEI_1412LSEI_1410LSEI_1412LSEI_1410LSEI_1412LSEI_1410LSEI_1410LSEI_1410LSEI_1412
SSP321332 CYB_0243CYB_0245CYB_0243CYB_0245CYB_0243CYB_0245CYB_0245CYB_0245CYB_0243
SWOL335541 SWOL_1049SWOL_1048SWOL_1049SWOL_1048SWOL_1049SWOL_1048SWOL_1048SWOL_1048SWOL_1049
BFRA295405 BF1338BF1339BF4382BF4383BF4382BF4383BF1339BF1339BF1338
BFRA272559 BF1322BF1323BF4180BF4181BF4180BF4181BF1323BF1323BF1322
PDIS435591 BDI_0787BDI_3392BDI_1866BDI_0786BDI_1866BDI_0786BDI_3392BDI_3392BDI_3393
ZMOB264203 ZMO1569ZMO1570ZMO1569ZMO1570ZMO1569ZMO1570ZMO1570ZMO1570ZMO1569
LPLA220668 LP_2596LP_3313LP_2596LP_2598LP_2596LP_2598LP_3313LP_3313LP_3314
SEPI176280 SE_0215SE_0214SE_0215SE_0214SE_0215SE_0214SE_0214SE_0214SE_0215
SEPI176279 SERP2365SERP2366SERP2365SERP2366SERP2365SERP2366SERP2366SERP2366SERP2365
BTHE226186 BT_2956BT_4738BT_2956BT_4738BT_2956BT_2955BT_4738BT_4738BT_4737
SAUR273036 SAB0165SAB0164SAB0165SAB0164SAB0165SAB0164SAB0164SAB0164SAB0165
CNOV386415 NT01CX_1221NT01CX_0015NT01CX_1221NT01CX_0498NT01CX_1221NT01CX_1220NT01CX_0015NT01CX_0015NT01CX_0016
SAUR367830 SAUSA300_0221SAUSA300_0220SAUSA300_0221SAUSA300_0220SAUSA300_0221SAUSA300_0220SAUSA300_0220SAUSA300_0220SAUSA300_0221
SAUR93062 SACOL0205SACOL0204SACOL0205SACOL0204SACOL0205SACOL0204SACOL0204SACOL0204SACOL0205
SAUR426430 NWMN_0163NWMN_0162NWMN_0163NWMN_0162NWMN_0163NWMN_0162NWMN_0162NWMN_0162NWMN_0163
SAUR282459 SAS0202SAS0201SAS0202SAS0201SAS0202SAS0201SAS0201SAS0201SAS0202
SAUR93061 SAOUHSC_00188SAOUHSC_00187SAOUHSC_00188SAOUHSC_00187SAOUHSC_00188SAOUHSC_00187SAOUHSC_00187SAOUHSC_00187SAOUHSC_00188
SAUR359786 SAURJH9_0211SAURJH9_0210SAURJH9_0211SAURJH9_0210SAURJH9_0211SAURJH9_0210SAURJH9_0210SAURJH9_0210SAURJH9_0211
SAUR418127 SAHV_0226SAHV_0225SAHV_0226SAHV_0225SAHV_0226SAHV_0225SAHV_0225SAHV_0225SAHV_0226
SAUR359787 SAURJH1_0217SAURJH1_0216SAURJH1_0217SAURJH1_0216SAURJH1_0217SAURJH1_0216SAURJH1_0216SAURJH1_0216SAURJH1_0217
SAUR158879 SA0219SA0218SA0219SA0218SA0219SA0218SA0218SA0218SA0219
SAUR282458 SAR0218SAR0217SAR0218SAR0217SAR0218SAR0217SAR0217SAR0217SAR0218
SAUR196620 MW0202MW0201MW0202MW0201MW0202MW0201MW0201MW0201MW0202
SAUR158878 SAV0227SAV0226SAV0227SAV0226SAV0227SAV0226SAV0226SAV0226SAV0227
CKLU431943 CKL_3001CKL_1107CKL_0322CKL_0323CKL_0322CKL_3002CKL_1107CKL_1107CKL_1106
CPER289380 CPR_0637CPR_1169CPR_1170CPR_1169CPR_1170CPR_1169CPR_1169CPR_1169CPR_1170
EFAE226185 EF_1612EF_1613EF_1612EF_1613EF_1612EF_1613EF_1613EF_1613EF_1612
ANAE240017 ANA_0888ANA_0886ANA_0888ANA_0886ANA_0888ANA_0887ANA_0888ANA_0886
CPHY357809 CPHY_1418CPHY_2823CPHY_1418CPHY_1174CPHY_1175CPHY_1174CPHY_2821CPHY_2823CPHY_2820
CPER195102 CPE0660CPE1153CPE1154CPE1153CPE1154CPE1153CPE1153CPE1153CPE1154
CPER195103 CPF_0641CPF_1356CPF_1357CPF_1356CPF_1357CPF_1356CPF_1356CPF_1356CPF_1357
TLET416591 TLET_1142TLET_1141TLET_1142TLET_1141TLET_1142TLET_1141TLET_1141TLET_1142
CBOT508765 CLL_A1512CLL_A2573CLL_A1840CLL_A1513CLL_A1512CLL_A1841CLL_A2573CLL_A2573CLL_A2572
AMAR329726 AM1_0441AM1_0439AM1_0441AM1_0439AM1_0441AM1_0439AM1_0439AM1_0439AM1_0441
LWEL386043 LWE1423LWE1422LWE1423LWE1422LWE1423LWE1422LWE1422LWE1422LWE1423
CBOT441771 CLC_3558CLC_3126CLC_2059CLC_2060CLC_2059CLC_3093CLC_3126CLC_3126CLC_3125
CBOT441772 CLI_3805CLI_3354CLI_2160CLI_2161CLI_3323CLI_3322CLI_3354CLI_3354CLI_3353
LMON265669 LMOF2365_1426LMOF2365_1946LMOF2365_1426LMOF2365_1425LMOF2365_1426LMOF2365_1425LMOF2365_1425LMOF2365_1946LMOF2365_1426
LINN272626 LIN1444LIN2031LIN1444LIN1443LIN1444LIN1443LIN1443LIN2031LIN1444
DDES207559 DDE_3054DDE_3039DDE_1272DDE_1273DDE_3281DDE_1273DDE_1273DDE_3282DDE_3281
LMON169963 LMO1407LMO1917LMO1407LMO1406LMO1407LMO1406LMO1406LMO1917LMO1407
CBOT36826 CBO3579CBO3216CBO2117CBO2118CBO2117CBO3183CBO3216CBO3216CBO3215
CBOT441770 CLB_3660CLB_3252CLB_2054CLB_2055CLB_2054CLB_3219CLB_3252CLB_3252CLB_3251
CDIF272563 CD3283CD0759CD3283CD1120CD0155CD1120CD0759CD0759CD0758
CBOT536232 CLM_4072CLM_3627CLM_2325CLM_2326CLM_3596CLM_3595CLM_3627CLM_3627CLM_3626
CBOT498213 CLD_0906CLD_1316CLD_2524CLD_2523CLD_2524CLD_1348CLD_1316CLD_1316CLD_1317
CBOT515621 CLJ_B3909CLJ_B3488CLJ_B2321CLJ_B2322CLJ_B3456CLJ_B3455CLJ_B3488CLJ_B3488CLJ_B3487
NHAM323097 NHAM_0890NHAM_0889NHAM_0890NHAM_0889NHAM_0890NHAM_0889NHAM_0889NHAM_0889NHAM_0890
HDUC233412 HD_0989HD_0990HD_0989HD_0990HD_0989HD_0990HD_1064HD_0990HD_0989
DRED349161 DRED_2966DRED_0039DRED_2752DRED_2750DRED_2966DRED_2965DRED_0039DRED_0039DRED_0038


Organism features enriched in list (features available for 83 out of the 90 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.254e-144092
Arrangment:Clusters 2.374e-101417
Arrangment:Pairs 9.181e-835112
Disease:Botulism 0.000052655
Disease:Gas_gangrene 0.002796533
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 2.679e-101111
Disease:Wide_range_of_infections 2.679e-101111
Disease:endocarditis 0.000385744
Disease:pneumonia 0.0003690712
Endospores:No 0.000317444211
Endospores:Yes 0.00257211553
GC_Content_Range4:0-40 2.069e-1158213
GC_Content_Range4:40-60 0.002650721224
GC_Content_Range4:60-100 3.368e-83145
GC_Content_Range7:0-30 0.00593631347
GC_Content_Range7:30-40 5.880e-845166
GC_Content_Range7:50-60 0.00010514107
GC_Content_Range7:60-70 2.361e-73134
Genome_Size_Range5:2-4 1.682e-851197
Genome_Size_Range5:4-6 0.000025511184
Genome_Size_Range9:2-3 1.129e-838120
Genome_Size_Range9:5-6 0.0000605288
Gram_Stain:Gram_Neg 3.846e-1515333
Gram_Stain:Gram_Pos 2.201e-2260150
Habitat:Aquatic 0.0009396491
Motility:No 1.622e-945151
Motility:Yes 0.000054722267
Optimal_temp.:- 0.000074521257
Optimal_temp.:30-35 0.000043167
Optimal_temp.:30-37 8.892e-131618
Optimal_temp.:37 0.000727926106
Oxygen_Req:Aerobic 9.256e-132185
Oxygen_Req:Anaerobic 9.965e-833102
Oxygen_Req:Facultative 0.000012746201
Pathogenic_in:Human 3.209e-853213
Pathogenic_in:No 0.002204721226
Shape:Coccus 5.935e-153882
Shape:Rod 0.002316138347



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5493 (reductive monocarboxylic acid cycle)2431900.8086
PWY-5480 (pyruvate fermentation to ethanol I)1091080.6731
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))1211000.5436
PWY0-1295 (pyrimidine ribonucleosides degradation I)2391510.5424
P441-PWY (superpathway of N-acetylneuraminate degradation)63630.4969
PWY0-1314 (fructose degradation)2241390.4969
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation)1351000.4852
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)134990.4807
PWY-5497 (purine nucleotides degradation IV (anaerobic))122900.4520
P122-PWY (heterolactic fermentation)119880.4469
ASPARAGINESYN-PWY (asparagine biosynthesis II)2401350.4259
PWY0-1296 (purine ribonucleosides degradation)3161590.4161
PWY0-301 (L-ascorbate degradation, anaerobic)84660.4024
SUCUTIL-PWY (sucrose degradation I)124850.4004
METHIONINE-DEG1-PWY (methionine degradation I (to homocysteine))31536-.4334



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7627   G6427   G6426   EG11911   EG11910   EG11784   EG10701   EG10028   
G79530.9994390.9997170.9995820.9996980.9996320.9993220.9994090.999637
G76270.9995830.9996530.9995890.9996310.9996570.9998760.999748
G64270.9998160.9998260.9997460.9995190.9995550.999728
G64260.9997540.9998190.999590.9996380.999642
EG119110.999790.9994780.9995610.999691
EG119100.9995810.9996140.999592
EG117840.9996230.999624
EG107010.999738
EG10028



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PAIRWISE BLAST SCORES:

  G7953   G7627   G6427   G6426   EG11911   EG11910   EG11784   EG10701   EG10028   
G79530.0f0---9.4e-7---2.0e-16
G7627-0.0f0-2.2e-33-1.7e-16-0-
G6427--0.0f0-1.8e-21---1.2e-20
G6426-2.6e-34-0.0f0-1.8e-121-6.3e-37-
EG11911--1.5e-22-0.0f0---1.4e-22
EG11910-1.7e-16-1.1e-125-0.0f0-8.0e-30-
EG11784-1.8e-9-6.9e-9--0.0f06.9e-19-
EG10701-0-3.7e-33-1.2e-263.3e-200.0f0-
EG100282.0e-16-1.2e-23-1.6e-23---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY-5437 (threonine degradation I) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.222, average score: 0.868)
  Genes in pathway or complex:
             0.4661 0.1365 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
   *in cand* 0.9997 0.9994 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
   *in cand* 0.9997 0.9994 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.9434 0.7880 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.9388 0.7698 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.9103 0.6440 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9996 EG10028 (pflA) PFLACTENZ-MONOMER (pyruvate formate-lyase activating enzyme)
   *in cand* 0.9996 0.9993 EG11784 (yfiD) EG11784-MONOMER (stress-induced alternate pyruvate formate-lyase subunit)
   *in cand* 0.9997 0.9996 EG11910 (pflD) EG11910-MONOMER (formate acetyltransferase 2)
   *in cand* 0.9997 0.9995 EG11911 (pflC) EG11911-MONOMER (probable pyruvate formate lyase 2 activating enzyme)
   *in cand* 0.9997 0.9996 G6426 (ybiW) G6426-MONOMER (predicted pyruvate formate lyase)
   *in cand* 0.9997 0.9995 G6427 (ybiY) G6427-MONOMER (predicted pyruvate formate lyase activating enzyme)
   *in cand* 0.9996 0.9993 G7953 (yjjW) G7953-MONOMER (predicted pyruvate formate lyase activating enzyme)

- THREOCAT-PWY (superpathway of threonine metabolism) (degree of match pw to cand: 0.083, degree of match cand to pw: 0.222, average score: 0.637)
  Genes in pathway or complex:
             0.4779 0.2833 M014 (mhpF) MHPF-MONOMER (acetaldehyde dehydrogenase 2)
             0.9374 0.7693 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.7567 0.1926 G6455 (ltaE) LTAA-MONOMER (LtaA)
             0.5017 0.3227 EG13139 (tynA) AMINEOXID-MONOMER (TynA)
             0.6509 0.2625 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
             0.9103 0.6440 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.9388 0.7698 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.9434 0.7880 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
   *in cand* 0.9997 0.9994 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
   *in cand* 0.9997 0.9994 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.4661 0.1365 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
             0.4507 0.1750 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.2039 0.0374 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.3744 0.2199 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
             0.1224 0.0507 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.5190 0.3773 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
             0.5433 0.4308 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.1903 0.0525 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.2758 0.0835 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.2408 0.0886 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.7392 0.1822 EG11904 (gldA) GLYCDEH-MONOMER (GldA)
             0.5442 0.2500 EG10993 (tdh) THREODEHYD-MONOMER (Tdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9996 EG10028 (pflA) PFLACTENZ-MONOMER (pyruvate formate-lyase activating enzyme)
   *in cand* 0.9996 0.9993 EG11784 (yfiD) EG11784-MONOMER (stress-induced alternate pyruvate formate-lyase subunit)
   *in cand* 0.9997 0.9996 EG11910 (pflD) EG11910-MONOMER (formate acetyltransferase 2)
   *in cand* 0.9997 0.9995 EG11911 (pflC) EG11911-MONOMER (probable pyruvate formate lyase 2 activating enzyme)
   *in cand* 0.9997 0.9996 G6426 (ybiW) G6426-MONOMER (predicted pyruvate formate lyase)
   *in cand* 0.9997 0.9995 G6427 (ybiY) G6427-MONOMER (predicted pyruvate formate lyase activating enzyme)
   *in cand* 0.9996 0.9993 G7953 (yjjW) G7953-MONOMER (predicted pyruvate formate lyase activating enzyme)

- FERMENTATION-PWY (mixed acid fermentation) (degree of match pw to cand: 0.071, degree of match cand to pw: 0.222, average score: 0.597)
  Genes in pathway or complex:
             0.9434 0.7880 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.9103 0.6440 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
   *in cand* 0.9997 0.9994 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
   *in cand* 0.9997 0.9994 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.7557 0.6118 G6775 (adhP) ADHP-MONOMER (ethanol dehydrogenase)
             0.9374 0.7693 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.5601 0.3851 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.4356 0.3128 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.2922 0.1228 G592 (ldhA) DLACTDEHYDROGNAD-MONOMER (D-lactate dehydrogenase)
             0.2179 0.0845 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.7680 0.6168 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8215 0.6989 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.0982 0.0357 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.3230 0.0358 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
             0.2545 0.0615 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.3748 0.1408 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
             0.2838 0.0812 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.3241 0.1027 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.2275 0.0472 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
             0.2284 0.0478 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.5363 0.2260 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.5332 0.1993 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.6380 0.3205 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.6784 0.3819 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
             0.7851 0.2170 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.4707 0.2020 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.6474 0.3645 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9996 EG10028 (pflA) PFLACTENZ-MONOMER (pyruvate formate-lyase activating enzyme)
   *in cand* 0.9996 0.9993 EG11784 (yfiD) EG11784-MONOMER (stress-induced alternate pyruvate formate-lyase subunit)
   *in cand* 0.9997 0.9996 EG11910 (pflD) EG11910-MONOMER (formate acetyltransferase 2)
   *in cand* 0.9997 0.9995 EG11911 (pflC) EG11911-MONOMER (probable pyruvate formate lyase 2 activating enzyme)
   *in cand* 0.9997 0.9996 G6426 (ybiW) G6426-MONOMER (predicted pyruvate formate lyase)
   *in cand* 0.9997 0.9995 G6427 (ybiY) G6427-MONOMER (predicted pyruvate formate lyase activating enzyme)
   *in cand* 0.9996 0.9993 G7953 (yjjW) G7953-MONOMER (predicted pyruvate formate lyase activating enzyme)

- ANARESP1-PWY (respiration (anaerobic)) (degree of match pw to cand: 0.074, degree of match cand to pw: 0.222, average score: 0.592)
  Genes in pathway or complex:
             0.5601 0.3851 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.4356 0.3128 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.5479 0.1820 EG10543 (lpd) E3-MONOMER (E3 monomer)
             0.5908 0.2749 EG10025 (aceF) ACEF-LIPOATE (AceF-lipoate)
             0.5614 0.2561 EG10024 (aceE) E1P-MONOMER (subunit of E1p component of pyruvate dehydrogenase complex)
             0.7851 0.2170 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.4707 0.2020 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.6474 0.3645 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.3230 0.0358 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
             0.0982 0.0357 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.2179 0.0845 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.7680 0.6168 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8215 0.6989 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
   *in cand* 0.9997 0.9994 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
   *in cand* 0.9997 0.9994 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.6137 0.3863 EG10258 (eno) ENOLASE-MONOMER (Eno)
             0.2545 0.0615 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.3748 0.1408 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
             0.2838 0.0812 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.3241 0.1027 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.2275 0.0472 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
             0.2284 0.0478 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.5363 0.2260 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.5332 0.1993 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.6380 0.3205 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.6784 0.3819 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9996 EG10028 (pflA) PFLACTENZ-MONOMER (pyruvate formate-lyase activating enzyme)
   *in cand* 0.9996 0.9993 EG11784 (yfiD) EG11784-MONOMER (stress-induced alternate pyruvate formate-lyase subunit)
   *in cand* 0.9997 0.9996 EG11910 (pflD) EG11910-MONOMER (formate acetyltransferase 2)
   *in cand* 0.9997 0.9995 EG11911 (pflC) EG11911-MONOMER (probable pyruvate formate lyase 2 activating enzyme)
   *in cand* 0.9997 0.9996 G6426 (ybiW) G6426-MONOMER (predicted pyruvate formate lyase)
   *in cand* 0.9997 0.9995 G6427 (ybiY) G6427-MONOMER (predicted pyruvate formate lyase activating enzyme)
   *in cand* 0.9996 0.9993 G7953 (yjjW) G7953-MONOMER (predicted pyruvate formate lyase activating enzyme)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11910 EG11911 (centered at EG11911)
G6426 G6427 (centered at G6427)
EG11784 (centered at EG11784)
G7627 (centered at G7627)
G7953 (centered at G7953)
EG10028 EG10701 (centered at EG10701)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7953   G7627   G6427   G6426   EG11911   EG11910   EG11784   EG10701   EG10028   
218/623204/623211/623202/623208/623202/623194/623197/623207/623
AFUL224325:0:Tyes101010-01
AHYD196024:0:Tyes012932181218221812182246512931046
ALAI441768:0:Tyes101010001
AMAR329726:9:Tyes202020002
AMET293826:0:Tyes301216643256010166416641663
ANAE240017:0:Tyes-20202120
AORE350688:0:Tyes017971455179717961797-17971455
APLE416269:0:Tyes6746756746756746750675674
APLE434271:0:Tno6496506496506496500650649
ASAL382245:5:Tyes01674197116741971167454216741971
ASP1667:3:Tyes--0------
ASP76114:2:Tyes0-0202--0
BANT260799:0:Tno101010001
BANT261594:2:Tno101010001
BANT568206:2:Tyes010101110
BANT592021:2:Tno101010001
BCER226900:1:Tyes101010001
BCER288681:0:Tno101010001
BCER315749:1:Tyes101010001
BCER405917:1:Tyes101010001
BCER572264:1:Tno101010001
BFRA272559:1:Tyes012829283028292830110
BFRA295405:0:Tno013103310431033104110
BLIC279010:0:Tyes010101110
BLON206672:0:Tyes010101110
BTHE226186:0:Tyes118031180310180318031802
BTHU281309:1:Tno101010001
BTHU412694:1:Tno101010001
BWEI315730:4:Tyes101010001
CACE272562:1:Tyes-01010001
CBEI290402:0:Tyes3668691038503669691691690
CBOT36826:1:Tno145811010101068110111011100
CBOT441770:0:Tyes152411700101137117011701169
CBOT441771:0:Tno13901032010998103210321031
CBOT441772:1:Tno152711580111271126115811581157
CBOT498213:1:Tno155311910101159119111911190
CBOT508765:1:Tyes0105432710328105410541053
CBOT515621:2:Tyes150811400111081107114011401139
CBOT536232:0:Tno164812560112251224125612561255
CDIF272563:1:Tyes317861231789860986612612611
CDIP257309:0:Tyes0-0-0---0
CHYD246194:0:Tyes0-0-1144---0
CKLU431943:1:Tyes26567730102657773773772
CKOR374847:0:Tyes101010001
CNOV386415:0:Tyes112211166610122112211222
CPER195102:1:Tyes0494495494495494494494495
CPER195103:0:Tno0709710709710709709709710
CPER289380:3:Tyes0528529528529528528528529
CPHY357809:0:Tyes2411633241010163116331630
CTET212717:0:Tyes14791010-01
CVIO243365:0:Tyes101010001
DARO159087:0:Tyes101010001
DDES207559:0:Tyes181618010120471120482047
DHAF138119:0:Tyes2626463310463200-1
DNOD246195:0:Tyes010101110
DOLE96561:0:Tyes1293129212930129301292-1293
DPSY177439:2:Tyes1256024822483248200-1256
DRED349161:0:Tyes296412742274029642963110
DVUL882:1:Tyes05525535525531552-553
ECAR218491:0:Tyes12040120412031204120369801204
ECOL199310:0:Tno44702901103927392621462901129
ECOL316407:0:Tno3546229210250325041773229280
ECOL331111:6:Tno39151021034603459189810284
ECOL362663:0:Tno3856237110331833171740237176
ECOL364106:1:Tno43032719103700369920742719147
ECOL405955:2:Tyes38091231032873512183012384
ECOL409438:6:Tyes3857255610342734262011255681
ECOL413997:0:Tno34912196103066306516772196117
ECOL439855:4:Tno393924871034433442184724871345
ECOL469008:0:Tno30040216221633442344348702057
ECOL481805:0:Tno257815851712171329732974015851586
ECOL585034:0:Tno3663236710323632351815236781
ECOL585035:0:Tno4045256410342936751838256482
ECOL585055:0:Tno4102263210351735161982263280
ECOL585056:2:Tno3966258410346234611898258486
ECOL585057:0:Tno409928151022392240196928151434
ECOL585397:0:Tno432313910376526022153139138
ECOL83334:0:Tno455187204077407625938786
ECOLI:0:Tno36312348103195319418148180
ECOO157:0:Tno45343173204110410926053173193
EFAE226185:3:Tyes010101110
EFER585054:1:Tyes3932546468467329132920546545
ESP42895:1:Tyes08967927918957912545896895
FMAG334413:1:Tyes010101110
FNUC190304:0:Tyes010101110
FSUC59374:0:Tyes404040004
GMET269799:1:Tyes2-2020--2
GSUL243231:0:Tyes101010--1
GVIO251221:0:Tyes-0-----0-
HDUC233412:0:Tyes0101016710
HINF281310:0:Tyes2312322312322312320232231
HINF374930:0:Tyes0359-359-359497359-
HINF71421:0:Tno1541551541551541550155154
HSOM205914:1:Tyes6686576686576686570657668
HSOM228400:0:Tno012012012763120
KPNE272620:2:Tyes26330376237613916391778903841
LCAS321967:1:Tyes202020002
LINN272626:1:Tno1614101006141
LLAC272622:5:Tyes123101231-1231--01231
LLAC272623:0:Tyes114901149-1149--01149
LMON169963:0:Tno1538101005381
LMON265669:0:Tyes1516101005161
LPLA220668:0:Tyes05550202555555556
LSAK314315:0:Tyes010101110
LWEL386043:0:Tyes101010001
MJAN243232:2:Tyes0--------
MKAN190192:0:Tyes0--------
MMAR368407:0:Tyes0--------
MMAR426368:0:Tyes0--------
MMAR444158:0:Tyes0--------
MMAZ192952:0:Tyes0--------
MSTA339860:0:Tyes0--------
MSUC221988:0:Tyes31293129312902931
MTHE187420:0:Tyes0-282283282283---
MTHE349307:0:Tyes0---86----
MXAN246197:0:Tyes--0------
NHAM323097:2:Tyes101010001
NSP35761:1:Tyes0-0-----0
PACN267747:0:Tyes--0------
PCAR338963:0:Tyes4514524514520452452452451
PDIS435591:0:Tyes125931071010710259325932594
PHOR70601:0:Tyes0--------
PING357804:0:Tyes188718861887188618871886018861887
PINT246198:0:Tyes020202220
PLUM243265:0:Fyes010101110
PMUL272843:1:Tyes13111311131101113
PPRO298386:2:Tyes144821862188218621882186021862188
PRUM264731:0:Tyes1010289290001
PTHE370438:0:Tyes01501501515-0
RALB246199:0:Tyes090909790
RPAL316055:0:Tyes101010001
RPAL316056:0:Tyes131820130130182018201821
RRUB269796:1:Tyes132091130130209120912090
RSOL267608:1:Tyes---0-0---
SAGA205921:0:Tno01292060661292994
SAGA208435:0:Tno013710606613711048
SAGA211110:0:Tyes014480606614481147
SAUR158878:1:Tno101010001
SAUR158879:1:Tno101010001
SAUR196620:0:Tno101010001
SAUR273036:0:Tno101010001
SAUR282458:0:Tno101010001
SAUR282459:0:Tno101010001
SAUR359786:1:Tno101010001
SAUR359787:1:Tno101010001
SAUR367830:3:Tno101010001
SAUR418127:0:Tyes101010001
SAUR426430:0:Tno101010001
SAUR93061:0:Fno101010001
SAUR93062:1:Tno101010001
SBAL399599:3:Tyes0386387386387386386386387
SBAL402882:1:Tno0421422421422421421421422
SBOY300268:1:Tyes352921401030883087179221401390
SDEN318161:0:Tyes101010001
SDYS300267:1:Tyes360823920128332832194623921511
SENT209261:0:Tno414127561692169316111693027561611
SENT220341:0:Tno3682841082017638482
SENT295319:0:Tno393927251567156814861568027251486
SENT321314:2:Tno3639238310321701836238387
SENT454169:2:Tno38422474109101826247491
SEPI176279:1:Tyes010101110
SEPI176280:0:Tno101010001
SFLE198214:0:Tyes35172269103128312717612269121
SFLE373384:0:Tno342490103049304817359089
SFUM335543:0:Tyes0--------
SGLO343509:3:Tyes01010182910
SGOR29390:0:Tyes151301513150715131507150701376
SHAL458817:0:Tyes023432344234323442343234323432344
SHIGELLA:0:Tno34162206102533253417112206133
SLOI323850:0:Tyes101010001
SMUT210007:0:Tyes810818381838301178
SONE211586:1:Tyes0494495494495494494494495
SPEA398579:0:Tno235010101110
SPNE1313:0:Tyes0185060661851621
SPNE170187:0:Tyes0320060663201583
SPNE171101:0:Tno0190060661901596
SPNE487213:0:Tno0201060662011544
SPNE487214:0:Tno0201060662011677
SPNE488221:0:Tno0215060662151638
SPRO399741:1:Tyes01947948947948200010
SPYO160490:0:Tno011631323131713231317131711630
SPYO186103:0:Tno012441406140014061400140012440
SPYO193567:0:Tno132701504149815041498149801327
SPYO198466:0:Tno013191478147214781472147213190
SPYO286636:0:Tno012541430142414301424142412540
SPYO293653:0:Tno012571442143614421436143612570
SPYO319701:0:Tyes012561440143414401434143412560
SPYO370551:0:Tno012701460145414601454145312700
SPYO370552:0:Tno013371524151815241518151813370
SPYO370553:0:Tno012731467146114671461146112730
SPYO370554:0:Tyes013301550154415501544154413300
SSED425104:0:Tyes014841483148414831484148414841483
SSON300269:1:Tyes352392103147018049291
SSP321327:0:Tyes020202220
SSP321332:0:Tyes020202220
SSP94122:1:Tyes010101110
SSUI391295:0:Tyes523052353252353253201491
SSUI391296:0:Tyes526052653252653253201503
STHE264199:0:Tyes0170-0--170
STHE292459:0:Tyes010101110
STHE299768:0:Tno0170-0--170
STHE322159:2:Tyes0170-0--170
STYP99287:1:Tyes369312910324732461791129126
SWOL335541:0:Tyes101010001
TDEN292415:0:Tyes0--------
TELO197221:0:Tyes0777077707777777770
TKOD69014:0:Tyes101010001
TLET416591:0:Tyes1010100-1
TTUR377629:0:Tyes322903229032290003229
VCHO:0:Tyes30303051003
VCHO345073:1:Tno30303046403
VFIS312309:1:Tyes820----0---
VFIS312309:2:Tyes-0101-53401
VPAR223926:0:Tyes--1010---
VPAR223926:1:Tyes923533----0533531
VVUL196600:2:Tyes144617271730172717301727017271730
VVUL216895:1:Tno166814921489149214891492014921489
YENT393305:1:Tyes295029529629529664801158
YPES187410:5:Tno150815061508150615081506015061508
YPES214092:3:Tno020202126620
YPES349746:2:Tno03160316031619263160
YPES360102:3:Tyes020202178820
YPES377628:2:Tno142314211423142114231421014211423
YPES386656:2:Tno7537517537517537510751753
YPSE273123:2:Tno020202149920
YPSE349747:2:Tno145514531455145314551453014531455
ZMOB264203:0:Tyes010101110



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