CANDIDATE ID: 76

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9975943e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages

GENE LIST:

- EG10980 (sucB) (b0727)
   Products of gene:
     - E2O-MONOMER (SucB)
     - SUCB-LIPOATE (SucB-lipoate)
     - SUCB-S-SUCCINYLDIHYDROLIPOATE (SucB-S-succinyldihydrolipoate)
     - SUCB-DIHYDROLIPOATE (SucB-dihydrolipoate)
     - E2O (dihydrolipoyltranssuccinylase)
       Reactions:
        succinyl-CoA + dihydrolipoyltranssuccinylase N6-(dihydrolipoyl)lysine  ->  dihydrolipoyltranssuccinylase N6-(S-succinyldihydrolipoyl)lysine + coenzyme A
         In pathways
         PWY-5084 (2-ketoglutarate dehydrogenase complex)
     - 2OXOGLUTARATEDEH-CPLX (2-oxoglutarate dehydrogenase complex)
       Reactions:
        2-oxoglutarate + NAD+ + coenzyme A  ->  succinyl-CoA + CO2 + NADH
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)

- EG10979 (sucA) (b0726)
   Products of gene:
     - E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
     - E1O (2-oxoglutarate decarboxylase, thiamin-requiring)
       Reactions:
        2-oxoglutarate + dihydrolipoyltranssuccinylase N6-(lipoyl)lysine  ->  dihydrolipoyltranssuccinylase N6-(S-succinyldihydrolipoyl)lysine + CO2
         In pathways
         PWY-5084 (2-ketoglutarate dehydrogenase complex)
     - 2OXOGLUTARATEDEH-CPLX (2-oxoglutarate dehydrogenase complex)
       Reactions:
        2-oxoglutarate + NAD+ + coenzyme A  ->  succinyl-CoA + CO2 + NADH
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)

- EG10934 (sdhD) (b0722)
   Products of gene:
     - SDH-MEMB2 (succinate dehydrogenase membrane protein)
     - SUCC-DEHASE (succinate dehydrogenase)
       Reactions:
        a ubiquinone + succinate  =  a ubiquinol + fumarate
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         PWY-3781 (PWY-3781)
         PWY-4302 (PWY-4302)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)
         PWY-5913 (PWY-5913)
         PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)
         PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)
         PWY-561 (PWY-561)

- EG10933 (sdhC) (b0721)
   Products of gene:
     - SDH-MEMB1 (succinate dehydrogenase membrane protein)
     - SUCC-DEHASE (succinate dehydrogenase)
       Reactions:
        a ubiquinone + succinate  =  a ubiquinol + fumarate
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         PWY-3781 (PWY-3781)
         PWY-4302 (PWY-4302)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)
         PWY-5913 (PWY-5913)
         PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)
         PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)
         PWY-561 (PWY-561)

- EG10932 (sdhB) (b0724)
   Products of gene:
     - SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
     - SUCC-DEHASE (succinate dehydrogenase)
       Reactions:
        a ubiquinone + succinate  =  a ubiquinol + fumarate
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         PWY-3781 (PWY-3781)
         PWY-4302 (PWY-4302)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)
         PWY-5913 (PWY-5913)
         PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)
         PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)
         PWY-561 (PWY-561)

- EG10931 (sdhA) (b0723)
   Products of gene:
     - SDH-FLAVO (succinate dehydrogenase flavoprotein)
     - SUCC-DEHASE (succinate dehydrogenase)
       Reactions:
        a ubiquinone + succinate  =  a ubiquinol + fumarate
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         PWY-3781 (PWY-3781)
         PWY-4302 (PWY-4302)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)
         PWY-5913 (PWY-5913)
         PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)
         PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)
         PWY-561 (PWY-561)

- EG10331 (frdB) (b4153)
   Products of gene:
     - FUM-FE-S (fumarate reductase iron-sulfur protein)
     - FUMARATE-REDUCTASE (fumarate reductase)
       Reactions:
        fumarate + a menaquinol  ->  a menaquinone + succinate
         In pathways
         PWY-5088 (PWY-5088)
         P108-PWY (P108-PWY)
         ANARESP1-PWY (respiration (anaerobic))
         REDCITCYC (REDCITCYC)
         PWY0-1336 (NADH to fumarate electron transfer)
         FERMENTATION-PWY (mixed acid fermentation)

- EG10330 (frdA) (b4154)
   Products of gene:
     - FUM-FLAVO (fumarate reductase flavoprotein)
     - FUMARATE-REDUCTASE (fumarate reductase)
       Reactions:
        fumarate + a menaquinol  ->  a menaquinone + succinate
         In pathways
         PWY-5088 (PWY-5088)
         P108-PWY (P108-PWY)
         ANARESP1-PWY (respiration (anaerobic))
         REDCITCYC (REDCITCYC)
         PWY0-1336 (NADH to fumarate electron transfer)
         FERMENTATION-PWY (mixed acid fermentation)

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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 233
Effective number of orgs (counting one per cluster within 468 clusters): 154

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
YPSE349747 ncbi	Yersinia pseudotuberculosis IP 31758	8
YPSE273123 ncbi	Yersinia pseudotuberculosis IP 32953	8
YPES386656 ncbi	Yersinia pestis Pestoides F	8
YPES377628 ncbi	Yersinia pestis Nepal516	8
YPES360102 ncbi	Yersinia pestis Antiqua	8
YPES349746 ncbi	Yersinia pestis Angola	8
YPES214092 ncbi	Yersinia pestis CO92	8
YPES187410 ncbi	Yersinia pestis KIM 10	8
YENT393305 ncbi	Yersinia enterocolitica enterocolitica 8081	8
XORY360094 ncbi	Xanthomonas oryzae pv. oryzae PXO99A	7
XORY342109 ncbi	Xanthomonas oryzae pv. oryzae MAFF 311018	7
XORY291331 ncbi	Xanthomonas oryzae pv. oryzae KACC10331	7
XFAS405440 ncbi	Xylella fastidiosa M12	7
XFAS183190 ncbi	Xylella fastidiosa Temecula1	7
XFAS160492 ncbi	Xylella fastidiosa 9a5c	7
XCAM487884	Xanthomonas campestris pv. paulliniae	7
XCAM316273 ncbi	Xanthomonas campestris pv. vesicatoria str. 85-10	7
XCAM314565 ncbi	Xanthomonas campestris pv. campestris str. 8004	7
XCAM190485 ncbi	Xanthomonas campestris pv. campestris str. ATCC 33913	7
XAXO190486 ncbi	Xanthomonas axonopodis pv. citri str. 306	7
WPIP955	Wolbachia pipientis	7
VVUL216895 ncbi	Vibrio vulnificus CMCP6	8
VVUL196600 ncbi	Vibrio vulnificus YJ016	8
VPAR223926 ncbi	Vibrio parahaemolyticus RIMD 2210633	8
VFIS312309 ncbi	Vibrio fischeri ES114	8
VEIS391735 ncbi	Verminephrobacter eiseniae EF01-2	8
VCHO345073 ncbi	Vibrio cholerae O395	8
VCHO ncbi	Vibrio cholerae O1 biovar El Tor str. N16961	8
TTUR377629 ncbi	Teredinibacter turnerae T7901	8
TDEN292415 ncbi	Thiobacillus denitrificans ATCC 25259	8
STYP99287 ncbi	Salmonella enterica enterica serovar Typhimurium str. LT2	8
SSP94122 ncbi	Shewanella sp. ANA-3	8
SSP644076	Silicibacter sp. TrichCH4B	7
SSP292414 ncbi	Ruegeria sp. TM1040	7
SSON300269 ncbi	Shigella sonnei Ss046	8
SSED425104 ncbi	Shewanella sediminis HAW-EB3	8
SPRO399741 ncbi	Serratia proteamaculans 568	8
SPEA398579 ncbi	Shewanella pealeana ATCC 700345	8
SONE211586 ncbi	Shewanella oneidensis MR-1	7
SMEL266834 ncbi	Sinorhizobium meliloti 1021	7
SMED366394 ncbi	Sinorhizobium medicae WSM419	7
SLOI323850 ncbi	Shewanella loihica PV-4	8
SLAC55218	Ruegeria lacuscaerulensis	7
SHIGELLA ncbi	Shigella flexneri 2a str. 2457T	8
SHAL458817 ncbi	Shewanella halifaxensis HAW-EB4	8
SGLO343509 ncbi	Sodalis glossinidius morsitans	8
SFLE373384 ncbi	Shigella flexneri 5 str. 8401	8
SFLE198214 ncbi	Shigella flexneri 2a str. 301	8
SENT454169 ncbi	Salmonella enterica enterica serovar Heidelberg str. SL476	8
SENT321314 ncbi	Salmonella enterica enterica serovar Choleraesuis str. SC-B67	7
SENT295319 ncbi	Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150	8
SENT220341 ncbi	Salmonella enterica enterica serovar Typhi str. CT18	8
SENT209261 ncbi	Salmonella enterica enterica serovar Typhi str. Ty2	8
SDYS300267 ncbi	Shigella dysenteriae Sd197	8
SDEN318161 ncbi	Shewanella denitrificans OS217	8
SDEG203122 ncbi	Saccharophagus degradans 2-40	8
SBOY300268 ncbi	Shigella boydii Sb227	8
SBAL402882 ncbi	Shewanella baltica OS185	8
SBAL399599 ncbi	Shewanella baltica OS195	8
SALA317655 ncbi	Sphingopyxis alaskensis RB2256	7
RTYP257363 ncbi	Rickettsia typhi Wilmington	8
RSPH349101 ncbi	Rhodobacter sphaeroides ATCC 17029	7
RSPH272943 ncbi	Rhodobacter sphaeroides 2.4.1	7
RSOL267608 ncbi	Ralstonia solanacearum GMI1000	8
RRUB269796 ncbi	Rhodospirillum rubrum ATCC 11170	7
RRIC452659 ncbi	Rickettsia rickettsii Iowa	7
RRIC392021 ncbi	Rickettsia rickettsii Sheila Smith	7
RPRO272947 ncbi	Rickettsia prowazekii Madrid E	7
RPOM246200 ncbi	Ruegeria pomeroyi DSS-3	7
RPAL316058 ncbi	Rhodopseudomonas palustris HaA2	7
RPAL316057 ncbi	Rhodopseudomonas palustris BisB5	7
RPAL316056 ncbi	Rhodopseudomonas palustris BisB18	7
RPAL316055 ncbi	Rhodopseudomonas palustris BisA53	7
RPAL258594 ncbi	Rhodopseudomonas palustris CGA009	7
RMET266264 ncbi	Ralstonia metallidurans CH34	8
RMAS416276 ncbi	Rickettsia massiliae MTU5	7
RLEG216596 ncbi	Rhizobium leguminosarum bv. viciae 3841	7
RFER338969 ncbi	Rhodoferax ferrireducens T118	8
RFEL315456 ncbi	Rickettsia felis URRWXCal2	7
REUT381666 ncbi	Ralstonia eutropha H16	8
REUT264198 ncbi	Ralstonia eutropha JMP134	8
RETL347834 ncbi	Rhizobium etli CFN 42	7
RCON272944 ncbi	Rickettsia conorii Malish 7	7
RCAN293613 ncbi	Rickettsia canadensis McKiel	8
RBEL391896 ncbi	Rickettsia bellii OSU 85-389	7
RBEL336407 ncbi	Rickettsia bellii RML369-C	7
RAKA293614 ncbi	Rickettsia akari Hartford	7
PSYR223283 ncbi	Pseudomonas syringae pv. tomato str. DC3000	8
PSYR205918 ncbi	Pseudomonas syringae pv. syringae B728a	8
PSTU379731 ncbi	Pseudomonas stutzeri A1501	8
PSP56811	Psychrobacter sp.	8
PSP312153 ncbi	Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1	8
PSP296591 ncbi	Polaromonas sp. JS666	8
PPUT76869 ncbi	Pseudomonas putida GB-1	8
PPUT351746 ncbi	Pseudomonas putida F1	8
PPUT160488 ncbi	Pseudomonas putida KT2440	8
PPRO298386 ncbi	Photobacterium profundum SS9	8
PNAP365044 ncbi	Polaromonas naphthalenivorans CJ2	8
PMEN399739 ncbi	Pseudomonas mendocina ymp	8
PLUM243265 ncbi	Photorhabdus luminescens laumondii TTO1	8
PING357804 ncbi	Psychromonas ingrahamii 37	8
PHAL326442 ncbi	Pseudoalteromonas haloplanktis TAC125	8
PFLU220664 ncbi	Pseudomonas fluorescens Pf-5	8
PFLU216595 ncbi	Pseudomonas fluorescens SBW25	8
PFLU205922 ncbi	Pseudomonas fluorescens Pf0-1	8
PENT384676 ncbi	Pseudomonas entomophila L48	8
PCRY335284 ncbi	Psychrobacter cryohalolentis K5	8
PATL342610 ncbi	Pseudoalteromonas atlantica T6c	8
PARC259536 ncbi	Psychrobacter arcticus 273-4	8
PAER208964 ncbi	Pseudomonas aeruginosa PAO1	8
PAER208963 ncbi	Pseudomonas aeruginosa UCBPP-PA14	8
OANT439375 ncbi	Ochrobactrum anthropi ATCC 49188	7
NWIN323098 ncbi	Nitrobacter winogradskyi Nb-255	7
NSEN222891 ncbi	Neorickettsia sennetsu Miyayama	7
NOCE323261 ncbi	Nitrosococcus oceani ATCC 19707	8
NMUL323848 ncbi	Nitrosospira multiformis ATCC 25196	8
NMEN374833 ncbi	Neisseria meningitidis 053442	8
NMEN272831 ncbi	Neisseria meningitidis FAM18	8
NMEN122587 ncbi	Neisseria meningitidis Z2491	8
NMEN122586 ncbi	Neisseria meningitidis MC58	8
NHAM323097 ncbi	Nitrobacter hamburgensis X14	7
NGON242231 ncbi	Neisseria gonorrhoeae FA 1090	8
NEUT335283 ncbi	Nitrosomonas eutropha C91	8
NEUR228410 ncbi	Nitrosomonas europaea ATCC 19718	8
NARO279238 ncbi	Novosphingobium aromaticivorans DSM 12444	7
MSP400668 ncbi	Marinomonas sp. MWYL1	8
MPET420662 ncbi	Methylibium petroleiphilum PM1	8
MMAR394221 ncbi	Maricaulis maris MCS10	7
MMAG342108 ncbi	Magnetospirillum magneticum AMB-1	7
MCAP243233 ncbi	Methylococcus capsulatus Bath	7
MAQU351348 ncbi	Marinobacter aquaeolei VT8	8
LPNE400673 ncbi	Legionella pneumophila Corby	8
LPNE297246 ncbi	Legionella pneumophila Paris	8
LPNE297245 ncbi	Legionella pneumophila Lens	8
LPNE272624 ncbi	Legionella pneumophila pneumophila Philadelphia 1	8
LCHO395495 ncbi	Leptothrix cholodnii SP-6	8
KPNE272620 ncbi	Klebsiella pneumoniae pneumoniae MGH 78578	8
JSP375286 ncbi	Janthinobacterium sp. Marseille	8
JSP290400 ncbi	Jannaschia sp. CCS1	7
ILOI283942 ncbi	Idiomarina loihiensis L2TR	8
HNEP81032	Hyphomonas neptunium	7
HHAL349124 ncbi	Halorhodospira halophila SL1	7
HCHE349521 ncbi	Hahella chejuensis KCTC 2396	8
HARS204773 ncbi	Herminiimonas arsenicoxydans	8
FTUL458234 ncbi	Francisella tularensis holarctica FTNF002-00	8
FTUL418136 ncbi	Francisella tularensis tularensis WY96-3418	8
FTUL401614 ncbi	Francisella novicida U112	8
FTUL393115 ncbi	Francisella tularensis tularensis FSC198	8
FTUL393011 ncbi	Francisella tularensis holarctica OSU18	8
FTUL351581	Francisella tularensis holarctica FSC200	8
FRANT ncbi	Francisella tularensis tularensis SCHU S4	8
FPHI484022 ncbi	Francisella philomiragia philomiragia ATCC 25017	8
ESP42895	Enterobacter sp.	8
ERUM302409 ncbi	Ehrlichia ruminantium Gardel	7
ERUM254945 ncbi	Ehrlichia ruminantium Welgevonden	7
ELIT314225 ncbi	Erythrobacter litoralis HTCC2594	7
EFER585054 ncbi	Escherichia fergusonii ATCC 35469	8
ECOO157 ncbi	Escherichia coli O157:H7 EDL933	8
ECOL83334	Escherichia coli O157:H7	8
ECOL585397 ncbi	Escherichia coli ED1a	8
ECOL585057 ncbi	Escherichia coli IAI39	8
ECOL585056 ncbi	Escherichia coli UMN026	8
ECOL585055 ncbi	Escherichia coli 55989	8
ECOL585035 ncbi	Escherichia coli S88	8
ECOL585034 ncbi	Escherichia coli IAI1	8
ECOL481805 ncbi	Escherichia coli ATCC 8739	8
ECOL469008 ncbi	Escherichia coli BL21(DE3)	8
ECOL439855 ncbi	Escherichia coli SMS-3-5	8
ECOL413997 ncbi	Escherichia coli B str. REL606	8
ECOL409438 ncbi	Escherichia coli SE11	8
ECOL405955 ncbi	Escherichia coli APEC O1	8
ECOL364106 ncbi	Escherichia coli UTI89	8
ECOL362663 ncbi	Escherichia coli 536	8
ECOL331111 ncbi	Escherichia coli E24377A	8
ECOL316407 ncbi	Escherichia coli K-12 substr. W3110	8
ECOL199310 ncbi	Escherichia coli CFT073	8
ECAR218491 ncbi	Pectobacterium atrosepticum SCRI1043	8
ECAN269484 ncbi	Ehrlichia canis Jake	7
DSHI398580 ncbi	Dinoroseobacter shibae DFL 12	7
DARO159087 ncbi	Dechloromonas aromatica RCB	8
CVIO243365 ncbi	Chromobacterium violaceum ATCC 12472	8
CSP78	Caulobacter sp.	7
CSP501479	Citreicella sp. SE45	7
CSAL290398 ncbi	Chromohalobacter salexigens DSM 3043	8
CPSY167879 ncbi	Colwellia psychrerythraea 34H	8
CPEL335992 ncbi	Candidatus Pelagibacter ubique HTCC1062	7
CJAP155077	Cellvibrio japonicus	8
CBUR434922 ncbi	Coxiella burnetii Dugway 5J108-111	8
CBUR360115 ncbi	Coxiella burnetii RSA 331	8
CBUR227377 ncbi	Coxiella burnetii RSA 493	8
CBLO291272 ncbi	Candidatus Blochmannia pennsylvanicus BPEN	8
CBLO203907 ncbi	Candidatus Blochmannia floridanus	8
CAULO ncbi	Caulobacter crescentus CB15	7
BVIE269482 ncbi	Burkholderia vietnamiensis G4	8
BTRI382640 ncbi	Bartonella tribocorum CIP 105476	7
BTHA271848 ncbi	Burkholderia thailandensis E264	8
BSUI470137 ncbi	Brucella suis ATCC 23445	7
BSUI204722 ncbi	Brucella suis 1330	7
BSP376	Bradyrhizobium sp.	7
BSP36773	Burkholderia sp.	8
BPSE320373 ncbi	Burkholderia pseudomallei 668	8
BPSE320372 ncbi	Burkholderia pseudomallei 1710b	8
BPSE272560 ncbi	Burkholderia pseudomallei K96243	8
BPET94624	Bordetella petrii	8
BPER257313 ncbi	Bordetella pertussis Tohama I	8
BPAR257311 ncbi	Bordetella parapertussis 12822	8
BOVI236	Brucella ovis	7
BMEL359391 ncbi	Brucella melitensis biovar Abortus 2308	7
BMEL224914 ncbi	Brucella melitensis bv. 1 str. 16M	7
BMAL320389 ncbi	Burkholderia mallei NCTC 10247	8
BMAL320388 ncbi	Burkholderia mallei SAVP1	8
BMAL243160 ncbi	Burkholderia mallei ATCC 23344	8
BJAP224911 ncbi	Bradyrhizobium japonicum USDA 110	7
BCEN331272 ncbi	Burkholderia cenocepacia HI2424	8
BCEN331271 ncbi	Burkholderia cenocepacia AU 1054	8
BCAN483179 ncbi	Brucella canis ATCC 23365	7
BBRO257310 ncbi	Bordetella bronchiseptica RB50	8
BBAC360095 ncbi	Bartonella bacilliformis KC583	7
BAMB398577 ncbi	Burkholderia ambifaria MC40-6	8
BAMB339670 ncbi	Burkholderia ambifaria AMMD	8
BABO262698 ncbi	Brucella abortus bv. 1 str. 9-941	7
ASP76114 ncbi	Aromatoleum aromaticum EbN1	8
ASP62977 ncbi	Acinetobacter sp. ADP1	8
ASP62928 ncbi	Azoarcus sp. BH72	8
ASP232721 ncbi	Acidovorax sp. JS42	8
ASAL382245 ncbi	Aeromonas salmonicida salmonicida A449	8
APHA212042 ncbi	Anaplasma phagocytophilum HZ	7
AHYD196024	Aeromonas hydrophila dhakensis	8
AEHR187272 ncbi	Alkalilimnicola ehrlichii MLHE-1	7
ACRY349163 ncbi	Acidiphilium cryptum JF-5	7
ABOR393595 ncbi	Alcanivorax borkumensis SK2	8
ABAU360910 ncbi	Bordetella avium 197N	8
AAVE397945 ncbi	Acidovorax citrulli AAC00-1	8

Names of the homologs of the genes in the group in each of these orgs

	EG10980	EG10979	EG10934	EG10933	EG10932	EG10931	EG10331	EG10330
YPSE349747	YPSIP31758_2880	YPSIP31758_2881	YPSIP31758_2884	YPSIP31758_2885	YPSIP31758_2882	YPSIP31758_2883	YPSIP31758_3668	YPSIP31758_3667
YPSE273123	YPTB1148	YPTB1147	YPTB1144	YPTB1143	YPTB1146	YPTB1145	YPTB0412	YPTB0413
YPES386656	YPDSF_2583	YPDSF_2584	YPDSF_2587	YPDSF_2588	YPDSF_2585	YPDSF_2586	YPDSF_3615	YPDSF_3614
YPES377628	YPN_2884	YPN_2885	YPN_2888	YPN_2889	YPN_2886	YPN_2887	YPN_3312	YPN_3311
YPES360102	YPA_0592	YPA_0591	YPA_0588	YPA_0587	YPA_0590	YPA_0589	YPA_3924	YPA_3923
YPES349746	YPANGOLA_A1385	YPANGOLA_A1384	YPANGOLA_A1381	YPANGOLA_A1380	YPANGOLA_A1383	YPANGOLA_A1382	YPANGOLA_A0715	YPANGOLA_A0714
YPES214092	YPO1114	YPO1113	YPO1110	YPO1109	YPO1112	YPO1111	YPO0359	YPO0360
YPES187410	Y3066	Y3067	Y3070	Y3071	Y3068	Y3069	Y0616	Y0617
YENT393305	YE2943	YE2944	YE2947	YE2948	YE2945	YE2946	YE0363	YE0364
XORY360094	XOOORF_2960	XOOORF_2959		XOOORF_2335	XOOORF_2339	XOOORF_2337	XOOORF_2339	XOOORF_2337
XORY342109	XOO1924	XOO1925		XOO2188	XOO2185	XOO2186	XOO2185	XOO2186
XORY291331	XOO2043	XOO2044		XOO2310	XOO2307	XOO2308	XOO2307	XOO2308
XFAS405440	XFASM12_0888	XFASM12_0889		XFASM12_0378	XFASM12_0381	XFASM12_0380	XFASM12_0381	XFASM12_0380
XFAS183190	PD_0759	PD_0760		PD_0350	PD_0353	PD_0352	PD_0353	PD_0352
XFAS160492	XF1549	XF1550		XF1070	XF1073	XF1072	XF1073	XF1072
XCAM487884	XCC-B100_2786	XCC-B100_2785		XCC-B100_2046	XCC-B100_2050	XCC-B100_2048	XCC-B100_2050	XCC-B100_2048
XCAM316273	XCAORF_1750	XCAORF_1752		XCAORF_2399	XCAORF_2395	XCAORF_2397	XCAORF_2395	XCAORF_2397
XCAM314565	XC_2750	XC_2749		XC_1981	XC_1985	XC_1983	XC_1985	XC_1983
XCAM190485	XCC1486	XCC1487		XCC2132	XCC2129	XCC2130	XCC2129	XCC2130
XAXO190486	XAC1534	XAC1535		XAC2075	XAC2078	XAC2077	XAC2078	XAC2077
WPIP955	WD_0544	WD_1309		WD_1221	WD_0727	WD_0437	WD_0727	WD_0437
VVUL216895	VV1_0156	VV1_0157	VV1_0160	VV1_0161	VV1_0158	VV1_0159	VV1_1268	VV1_1269
VVUL196600	VV1033	VV1032	VV1029	VV1028	VV1031	VV1030	VV3098	VV3097
VPAR223926	VP0848	VP0847	VP0844	VP0843	VP0846	VP0845	VP2841	VP2840
VFIS312309	VF0824	VF0823	VF0820	VF0819	VF0822	VF0821	VF2335	VF2334
VEIS391735	VEIS_3978	VEIS_3979	VEIS_4353	VEIS_4354	VEIS_4351	VEIS_4352	VEIS_4351	VEIS_4352
VCHO345073	VC0395_A1672	VC0395_A1673	VC0395_A1676	VC0395_A1677	VC0395_A1674	VC0395_A1675	VC0395_A2231	VC0395_A2230
VCHO	VC2086	VC2087	VC2090	VC2091	VC2088	VC2089	VC2657	VC2656
TTUR377629	TERTU_2521	TERTU_2522	TERTU_2525	TERTU_2526	TERTU_2523	TERTU_2524	TERTU_2523	TERTU_2524
TDEN292415	TBD_1189	TBD_1188	TBD_1183	TBD_1182	TBD_1185	TBD_1184	TBD_1185	TBD_1184
STYP99287	STM0737	STM0736	STM0733	STM0732	STM0735	STM0734	STM4342	STM4343
SSP94122	SHEWANA3_1711	SHEWANA3_1710	SHEWANA3_1707	SHEWANA3_1706	SHEWANA3_1709	SHEWANA3_1708	SHEWANA3_1709	SHEWANA3_1708
SSP644076	SCH4B_0428	SCH4B_0429		SCH4B_0444	SCH4B_0449	SCH4B_0446	SCH4B_0449	SCH4B_0446
SSP292414	TM1040_3510	TM1040_3511		TM1040_3525	TM1040_3530	TM1040_3527	TM1040_3530	TM1040_3527
SSON300269	SSO_0678	SSO_0677	SSO_0673	SSO_0672	SSO_0675	SSO_0674	SSO_4339	SSO_4340
SSED425104	SSED_2813	SSED_2814	SSED_2817	SSED_2818	SSED_2815	SSED_2816	SSED_2815	SSED_2816
SPRO399741	SPRO_1268	SPRO_1267	SPRO_1264	SPRO_1263	SPRO_1266	SPRO_1265	SPRO_0418	SPRO_0419
SPEA398579	SPEA_1789	SPEA_1788	SPEA_1785	SPEA_1784	SPEA_1787	SPEA_1786	SPEA_1787	SPEA_1786
SONE211586	SO_1931	SO_1930		SO_1927	SO_1929	SO_1928	SO_1929	SO_1928
SMEL266834	SMC02483	SMC02482		SMC02463	SMC02466	SMC02465	SMC02466	SMC02465
SMED366394	SMED_2940	SMED_2941		SMED_2959	SMED_2956	SMED_2957	SMED_2956	SMED_2957
SLOI323850	SHEW_1656	SHEW_1655	SHEW_1652	SHEW_1651	SHEW_1654	SHEW_1653	SHEW_1654	SHEW_1653
SLAC55218	SL1157_0640	SL1157_0639		SL1157_0626	SL1157_0623	SL1157_0624	SL1157_0623	SL1157_0624
SHIGELLA	SUCB	SUCA	SDHD	SDHC	SDHB	SDHA	FRDB	FRDA
SHAL458817	SHAL_2488	SHAL_2489	SHAL_2492	SHAL_2493	SHAL_2490	SHAL_2491	SHAL_2490	SHAL_2491
SGLO343509	SG0877	SG0876	SG0873	SG0872	SG0875	SG0874	SG0875	SG0874
SFLE373384	SFV_0609	SFV_0610	SFV_0613	SFV_0614	SFV_0611	SFV_0612	SFV_4312	SFV_4313
SFLE198214	AAN42214.1	AAN42215.1	AAN42219.1	AAN42220.1	AAN42217.1	AAN42218.1	AAN45729.1	AAN45730.1
SENT454169	SEHA_C0860	SEHA_C0859	SEHA_C0856	SEHA_C0855	SEHA_C0858	SEHA_C0857	SEHA_C4760	SEHA_C4761
SENT321314	SCH_0741	SCH_0740		SCH_0737	SCH_0739	SCH_0738	SCH_4221	SCH_4222
SENT295319	SPA2006	SPA2007	SPA2010	SPA2011	SPA2008	SPA2009	SPA4159	SPA4160
SENT220341	STY0780	STY0779	STY0776	STY0775	STY0778	STY0777	STY4702	STY4703
SENT209261	T2139	T2140	T2143	T2144	T2141	T2142	T4394	T4395
SDYS300267	SDY_0665	SDY_0664	SDY_0660	SDY_0659	SDY_0662	SDY_0661	SDY_4397	SDY_4398
SDEN318161	SDEN_2182	SDEN_2183	SDEN_2186	SDEN_2187	SDEN_2184	SDEN_2185	SDEN_2184	SDEN_2185
SDEG203122	SDE_2105	SDE_2106	SDE_2109	SDE_2110	SDE_2107	SDE_2108	SDE_2107	SDE_2108
SBOY300268	SBO_0585	SBO_0584	SBO_0580	SBO_0579	SBO_0582	SBO_0581	SBO_4303	SBO_4302
SBAL402882	SHEW185_2507	SHEW185_2508	SHEW185_2511	SHEW185_2512	SHEW185_2509	SHEW185_2510	SHEW185_2509	SHEW185_2510
SBAL399599	SBAL195_2627	SBAL195_2628	SBAL195_2631	SBAL195_2632	SBAL195_2629	SBAL195_2630	SBAL195_2629	SBAL195_2630
SALA317655	SALA_2227	SALA_2228		SALA_3030	SALA_2234	SALA_3032	SALA_2234	SALA_3032
RTYP257363	RT0170	RT0171	RT0116	RT0115	RT0086	RT0117	RT0086	RT0117
RSPH349101	RSPH17029_2624	RSPH17029_2625		RSPH17029_2634	RSPH17029_2639	RSPH17029_2636	RSPH17029_3887	RSPH17029_2636
RSPH272943	RSP_0964	RSP_0965		RSP_0974	RSP_0979	RSP_0976	RSP_3150	RSP_0976
RSOL267608	RSC1270	RSP1364	RSC1995	RSC1996	RSC1993	RSC1994	RSC1993	RSC1994
RRUB269796	RRU_A1214	RRU_A1213		RRU_A1202	RRU_A1205	RRU_A1204	RRU_A1205	RRU_A1204
RRIC452659	RRIOWA_0280	RRIOWA_0282		RRIOWA_0209	RRIOWA_0091	RRIOWA_0211	RRIOWA_0091	RRIOWA_0211
RRIC392021	A1G_01290	A1G_01300		A1G_00965	A1G_00440	A1G_00980	A1G_00440	A1G_00980
RPRO272947	RP179	RP180		RP126	RP044	RP128	RP044	RP128
RPOM246200	SPO_0343	SPO_0344		SPO_0358	SPO_0361	SPO_0360	SPO_0361	SPO_0360
RPAL316058	RPB_0277	RPB_0278		RPB_0327	RPB_0324	RPB_0325	RPB_0324	RPB_0325
RPAL316057	RPD_0545	RPD_0544		RPD_0481	RPD_0478	RPD_0479	RPD_0478	RPD_0479
RPAL316056	RPC_0190	RPC_0191		RPC_0072	RPC_0068	RPC_0070	RPC_0068	RPC_0070
RPAL316055	RPE_0296	RPE_0297		RPE_0510	RPE_0514	RPE_0512	RPE_0514	RPE_0512
RPAL258594	RPA0188	RPA0189		RPA0219	RPA0216	RPA0217	RPA0216	RPA0217
RMET266264	RMET_2049	RMET_2050	RMET_2485	RMET_2486	RMET_2483	RMET_2484	RMET_2483	RMET_2484
RMAS416276	RMA_0238	RMA_0239		RMA_0176	RMA_0075	RMA_0178	RMA_0075	RMA_0178
RLEG216596	RL4433	RL4435		RL4446	RL4443	RL4444	RL4443	RL4444
RFER338969	RFER_2320	RFER_2321	RFER_1800	RFER_1801	RFER_1798	RFER_1799	RFER_1798	RFER_1799
RFEL315456	RF_1093	RF_1092		RF_1163	RF_0136	RF_1159	RF_0136	RF_1159
REUT381666	H16_A2324	H16_A2325	H16_A2631	H16_A2632	H16_A2629	H16_A2630	H16_A2629	H16_A2630
REUT264198	REUT_A2046	REUT_A2047	REUT_A2324	REUT_A2325	REUT_A2322	REUT_A2323	REUT_A2322	REUT_A2323
RETL347834	RHE_CH03887	RHE_CH03888		RHE_CH03897	RHE_CH03894	RHE_CH03895	RHE_CH03894	RHE_CH03895
RCON272944	RC0226	RC0227		RC0168	RC0069	RC0170	RC0069	RC0170
RCAN293613	A1E_00935	A1E_00930	A1E_00650	A1E_00640	A1E_00210	A1E_00655	A1E_00210	A1E_00655
RBEL391896	A1I_01835	A1I_01830		A1I_01440	A1I_07725	A1I_01460	A1I_07725	A1I_01460
RBEL336407	RBE_1098	RBE_1099		RBE_1168	RBE_1390	RBE_1164	RBE_1390	RBE_1164
RAKA293614	A1C_01295	A1C_01300		A1C_00930	A1C_00380	A1C_00955	A1C_00380	A1C_00955
PSYR223283	PSPTO_2200	PSPTO_2199	PSPTO_2196	PSPTO_2195	PSPTO_2198	PSPTO_2197	PSPTO_2198	PSPTO_2197
PSYR205918	PSYR_2010	PSYR_2009	PSYR_2006	PSYR_2005	PSYR_2008	PSYR_2007	PSYR_2008	PSYR_2007
PSTU379731	PST_1876	PST_1875	PST_1872	PST_1871	PST_1874	PST_1873	PST_1874	PST_1873
PSP56811	PSYCPRWF_0267	PSYCPRWF_0266	PSYCPRWF_0262	PSYCPRWF_0261	PSYCPRWF_0264	PSYCPRWF_0263	PSYCPRWF_0264	PSYCPRWF_0263
PSP312153	PNUC_0841	PNUC_0840	PNUC_0759	PNUC_0758	PNUC_0761	PNUC_0760	PNUC_0761	PNUC_0760
PSP296591	BPRO_2623	BPRO_2624	BPRO_3601	BPRO_3600	BPRO_3603	BPRO_3602	BPRO_3603	BPRO_3602
PPUT76869	PPUTGB1_3759	PPUTGB1_3760	PPUTGB1_3763	PPUTGB1_3764	PPUTGB1_3761	PPUTGB1_3762	PPUTGB1_3761	PPUTGB1_3762
PPUT351746	PPUT_1666	PPUT_1665	PPUT_1662	PPUT_1661	PPUT_1664	PPUT_1663	PPUT_1664	PPUT_1663
PPUT160488	PP_4188	PP_4189	PP_4192	PP_4193	PP_4190	PP_4191	PP_4190	PP_4191
PPRO298386	PBPRA1049	PBPRA1048	PBPRA1045	PBPRA1044	PBPRA1047	PBPRA1046	PBPRA3379	PBPRA3378
PNAP365044	PNAP_1857	PNAP_1856	PNAP_3033	PNAP_3032	PNAP_3035	PNAP_3034	PNAP_3035	PNAP_3034
PMEN399739	PMEN_2502	PMEN_2503	PMEN_2506	PMEN_2507	PMEN_2504	PMEN_2505	PMEN_2504	PMEN_2505
PLUM243265	PLU1431	PLU1430	PLU1427	PLU1426	PLU1429	PLU1428	PLU4125	PLU4124
PING357804	PING_2251	PING_2252	PING_2255	PING_2256	PING_2253	PING_2254	PING_3279	PING_3278
PHAL326442	PSHAA1646	PSHAA1647	PSHAA1650	PSHAA1651	PSHAA1648	PSHAA1649	PSHAA1648	PSHAA1649
PFLU220664	PFL_1719	PFL_1718	PFL_1715	PFL_1714	PFL_1717	PFL_1716	PFL_1717	PFL_1716
PFLU216595	PFLU1821	PFLU1820	PFLU1817	PFLU1816	PFLU1819	PFLU1818	PFLU1819	PFLU1818
PFLU205922	PFL_1615	PFL_1614	PFL_1611	PFL_1610	PFL_1613	PFL_1612	PFL_1613	PFL_1612
PENT384676	PSEEN3639	PSEEN3640	PSEEN3643	PSEEN3644	PSEEN3641	PSEEN3642	PSEEN3641	PSEEN3642
PCRY335284	PCRYO_0112	PCRYO_0111	PCRYO_0108	PCRYO_0107	PCRYO_0110	PCRYO_0109	PCRYO_0110	PCRYO_0109
PATL342610	PATL_1800	PATL_1799	PATL_1796	PATL_1795	PATL_1798	PATL_1797	PATL_1798	PATL_1797
PARC259536	PSYC_0103	PSYC_0102	PSYC_0099	PSYC_0098	PSYC_0101	PSYC_0100	PSYC_0101	PSYC_0100
PAER208964	PA1586	PA1585	PA1582	PA1581	PA1584	PA1583	PA1584	PA1583
PAER208963	PA14_44000	PA14_44010	PA14_44050	PA14_44060	PA14_44020	PA14_44030	PA14_44020	PA14_44030
OANT439375	OANT_0934	OANT_0933		OANT_0951	OANT_0954	OANT_0953	OANT_0954	OANT_0953
NWIN323098	NWI_0423	NWI_0422		NWI_2798	NWI_2801	NWI_2800	NWI_2801	NWI_2800
NSEN222891	NSE_0548	NSE_0578		NSE_0047	NSE_0534	NSE_0376	NSE_0534	NSE_0376
NOCE323261	NOC_0112	NOC_0111	NOC_2472	NOC_2473	NOC_2470	NOC_2471	NOC_2470	NOC_2471
NMUL323848	NMUL_A0856	NMUL_A0857	NMUL_A0862	NMUL_A0863	NMUL_A0860	NMUL_A0861	NMUL_A0860	NMUL_A0861
NMEN374833	NMCC_0899	NMCC_0898	NMCC_0893	NMCC_0892	NMCC_0895	NMCC_0894	NMCC_0895	NMCC_0894
NMEN272831	NMC0932	NMC0931	NMC0926	NMC0925	NMC0928	NMC0927	NMC0928	NMC0927
NMEN122587	NMA1150	NMA1149	NMA1144	NMA1143	NMA1146	NMA1145	NMA1146	NMA1145
NMEN122586	NMB_0956	NMB_0955	NMB_0949	NMB_0948	NMB_0951	NMB_0950	NMB_0951	NMB_0950
NHAM323097	NHAM_0541	NHAM_0542		NHAM_3616	NHAM_3619	NHAM_3618	NHAM_3619	NHAM_3618
NGON242231	NGO0916	NGO0917	NGO0922	NGO0923	NGO0920	NGO0921	NGO0920	NGO0921
NEUT335283	NEUT_0859	NEUT_0860	NEUT_2485	NEUT_2484	NEUT_0863	NEUT_2486	NEUT_0863	NEUT_2486
NEUR228410	NE2375	NE2374	NE1047	NE1046	NE2371	NE1048	NE2371	NE1048
NARO279238	SARO_1179	SARO_1180		SARO_1744	SARO_2322	SARO_1746	SARO_2322	SARO_1746
MSP400668	MMWYL1_2799	MMWYL1_2800	MMWYL1_2803	MMWYL1_2804	MMWYL1_2801	MMWYL1_2802	MMWYL1_2801	MMWYL1_2802
MPET420662	MPE_A2012	MPE_A2013	MPE_A2169	MPE_A2170	MPE_A2167	MPE_A2168	MPE_A2167	MPE_A2168
MMAR394221	MMAR10_2816	MMAR10_2817		MMAR10_2848	MMAR10_2844	MMAR10_2846	MMAR10_2844	MMAR10_2846
MMAG342108	AMB3962	AMB3961		AMB3950	AMB3953	AMB3952	AMB3953	AMB3952
MCAP243233	MCA_1953	MCA_1952		MCA_1548	MCA_1542	MCA_1550	MCA_1542	MCA_1550
MAQU351348	MAQU_1155	MAQU_1154	MAQU_1151	MAQU_1150	MAQU_1153	MAQU_1152	MAQU_1153	MAQU_1152
LPNE400673	LPC_2769	LPC_2770	LPC_2773	LPC_2774	LPC_2771	LPC_2772	LPC_2771	LPC_2772
LPNE297246	LPP0598	LPP0597	LPP0594	LPP0593	LPP0596	LPP0595	LPP0596	LPP0595
LPNE297245	LPL0579	LPL0578	LPL0575	LPL0574	LPL0577	LPL0576	LPL0577	LPL0576
LPNE272624	LPG0533	LPG0532	LPG0529	LPG0528	LPG0531	LPG0530	LPG0531	LPG0530
LCHO395495	LCHO_2883	LCHO_2884	LCHO_2705	LCHO_2706	LCHO_2703	LCHO_2704	LCHO_2703	LCHO_2704
KPNE272620	GKPORF_B5162	GKPORF_B5161	GKPORF_B5158	GKPORF_B5156	GKPORF_B5160	GKPORF_B5159	GKPORF_B3910	GKPORF_B3911
JSP375286	MMA_1513	MMA_1512	MMA_1507	MMA_1506	MMA_1509	MMA_1508	MMA_1509	MMA_1508
JSP290400	JANN_0832	JANN_0831		JANN_0811	JANN_0804	JANN_0809	JANN_3966	JANN_0809
ILOI283942	IL1502	IL1503	IL1506	IL1507	IL1504	IL1505	IL1504	IL1505
HNEP81032	HNE_0313	HNE_0312		HNE_3243	HNE_3247	HNE_3245	HNE_3247	HNE_3245
HHAL349124	HHAL_1085	HHAL_1086		HHAL_0046	HHAL_0043	HHAL_0044	HHAL_1449	HHAL_1450
HCHE349521	HCH_04744	HCH_04745	HCH_04748	HCH_04749	HCH_04746	HCH_04747	HCH_04746	HCH_04747
HARS204773	HEAR1771	HEAR1772	HEAR1777	HEAR1778	HEAR1775	HEAR1776	HEAR1775	HEAR1776
FTUL458234	FTA_1889	FTA_1890	FTA_1893	FTA_1894	FTA_1891	FTA_1892	FTA_1891	FTA_1892
FTUL418136	FTW_0153	FTW_0152	FTW_0149	FTW_0148	FTW_0151	FTW_0150	FTW_0151	FTW_0150
FTUL401614	FTN_1634	FTN_1635	FTN_1638	FTN_1639	FTN_1636	FTN_1637	FTN_1636	FTN_1637
FTUL393115	FTF0077	FTF0076	FTF0073	FTF0072	FTF0075	FTF0074	FTF0075	FTF0074
FTUL393011	FTH_1719	FTH_1720	FTH_1723	FTH_1724	FTH_1721	FTH_1722	FTH_1721	FTH_1722
FTUL351581	FTL_1783	FTL_1784	FTL_1787	FTL_1788	FTL_1785	FTL_1786	FTL_1785	FTL_1786
FRANT	SUCB	SUCA	SDHD	SDHC	SDHB	SDHA	SDHB	SDHA
FPHI484022	FPHI_0974	FPHI_0973	FPHI_0970	FPHI_0969	FPHI_0972	FPHI_0971	FPHI_0972	FPHI_0971
ESP42895	ENT638_1227	ENT638_1226	ENT638_1223	ENT638_1222	ENT638_1225	ENT638_1224	ENT638_0342	ENT638_0343
ERUM302409	ERGA_CDS_08590	ERGA_CDS_02650		ERGA_CDS_01840	ERGA_CDS_07070	ERGA_CDS_07080	ERGA_CDS_07070	ERGA_CDS_07080
ERUM254945	ERWE_CDS_08690	ERWE_CDS_02690		ERWE_CDS_01890	ERWE_CDS_07150	ERWE_CDS_07160	ERWE_CDS_07150	ERWE_CDS_07160
ELIT314225	ELI_08005	ELI_08000		ELI_07165	ELI_06795	ELI_07155	ELI_06795	ELI_07155
EFER585054	EFER_2386	EFER_2387	EFER_2390	EFER_2391	EFER_2388	EFER_2389	EFER_4207	EFER_4208
ECOO157	SUCB	SUCA	SDHD	SDHC	SDHB	SDHA	FRDB	FRDA
ECOL83334	ECS0752	ECS0751	ECS0747	ECS0746	ECS0749	ECS0748	ECS5134	ECS5135
ECOL585397	ECED1_0696	ECED1_0695	ECED1_0692	ECED1_0691	ECED1_0694	ECED1_0693	ECED1_4942	ECED1_4943
ECOL585057	ECIAI39_0684	ECIAI39_0683	ECIAI39_0680	ECIAI39_0679	ECIAI39_0682	ECIAI39_0681	ECIAI39_4620	ECIAI39_4621
ECOL585056	ECUMN_0804	ECUMN_0803	ECUMN_0800	ECUMN_0799	ECUMN_0802	ECUMN_0801	ECUMN_4689	ECUMN_4690
ECOL585055	EC55989_0710	EC55989_0709	EC55989_0706	EC55989_0705	EC55989_0708	EC55989_0707	EC55989_4710	EC55989_4711
ECOL585035	ECS88_0752	ECS88_4534	ECS88_0748	ECS88_0747	ECS88_0750	ECS88_0749	ECS88_4741	ECS88_4742
ECOL585034	ECIAI1_0700	ECIAI1_0699	ECIAI1_0696	ECIAI1_0695	ECIAI1_0698	ECIAI1_0697	ECIAI1_4390	ECIAI1_4391
ECOL481805	ECOLC_2929	ECOLC_2930	ECOLC_2933	ECOLC_2934	ECOLC_2931	ECOLC_2932	ECOLC_3857	ECOLC_3856
ECOL469008	ECBD_2934	ECBD_2935	ECBD_2938	ECBD_2939	ECBD_2936	ECBD_2937	ECBD_3876	ECBD_3875
ECOL439855	ECSMS35_0739	ECSMS35_0738	ECSMS35_0735	ECSMS35_0734	ECSMS35_0737	ECSMS35_0736	ECSMS35_4624	ECSMS35_4625
ECOL413997	ECB_00686	ECB_00685	ECB_00682	ECB_00681	ECB_00684	ECB_00683	ECB_04025	ECB_04026
ECOL409438	ECSE_0786	ECSE_0785	ECSE_0782	ECSE_0781	ECSE_0784	ECSE_0783	ECSE_4455	ECSE_4456
ECOL405955	APECO1_1352	APECO1_1353	APECO1_1356	APECO1_1357	APECO1_1354	APECO1_1355	APECO1_2236	APECO1_2235
ECOL364106	UTI89_C0722	UTI89_C4630	UTI89_C0718	UTI89_C0717	UTI89_C0720	UTI89_C0719	UTI89_C4753	UTI89_C4754
ECOL362663	ECP_0738	ECP_4274	ECP_0734	ECP_0733	ECP_0736	ECP_0735	ECP_4399	ECP_4400
ECOL331111	ECE24377A_0753	ECE24377A_0752	ECE24377A_0749	ECE24377A_0748	ECE24377A_0751	ECE24377A_0750	ECE24377A_4712	ECE24377A_4713
ECOL316407	ECK0715:JW0716:B0727	ECK0714:JW0715:B0726	ECK0711:JW0712:B0722	ECK0710:JW0711:B0721	ECK0713:JW0714:B0724	ECK0712:JW0713:B0723	ECK4149:JW4114:B4153	ECK4150:JW4115:B4154
ECOL199310	C0804	C5032	C0800	C0798	C0802	C0801	C5241	C5242
ECAR218491	ECA1362	ECA1361	ECA1358	ECA1357	ECA1360	ECA1359	ECA3970	ECA3969
ECAN269484	ECAJ_0857	ECAJ_0255		ECAJ_0189	ECAJ_0687	ECAJ_0688	ECAJ_0687	ECAJ_0688
DSHI398580	DSHI_2884	DSHI_2883		DSHI_2867	DSHI_2861	DSHI_2865	DSHI_2861	DSHI_2865
DARO159087	DARO_2858	DARO_2859	DARO_2864	DARO_2865	DARO_2862	DARO_2863	DARO_2862	DARO_2863
CVIO243365	CV_1072	CV_1071	CV_1066	CV_1065	CV_1068	CV_1067	CV_3368	CV_3369
CSP78	CAUL_0232	CAUL_0231		CAUL_4840	CAUL_4837	CAUL_4838	CAUL_4837	CAUL_4838
CSP501479	CSE45_4089	CSE45_4088		CSE45_4075	CSE45_4069	CSE45_4073	CSE45_4069	CSE45_4073
CSAL290398	CSAL_1218	CSAL_1217	CSAL_1214	CSAL_1213	CSAL_1216	CSAL_1215	CSAL_1216	CSAL_1215
CPSY167879	CPS_2220	CPS_2219	CPS_2216	CPS_2215	CPS_2218	CPS_2217	CPS_2218	CPS_2217
CPEL335992	SAR11_0236	SAR11_0237		SAR11_1721	SAR11_0242	SAR11_0243	SAR11_0242	SAR11_0243
CJAP155077	CJA_1506	CJA_1505	CJA_1502	CJA_1501	CJA_1504	CJA_1503	CJA_1504	CJA_1503
CBUR434922	COXBU7E912_0595	COXBU7E912_0594	COXBU7E912_0591	COXBU7E912_0590	COXBU7E912_0593	COXBU7E912_0592	COXBU7E912_0593	COXBU7E912_0592
CBUR360115	COXBURSA331_A1558	COXBURSA331_A1559	COXBURSA331_A1562	COXBURSA331_A1563	COXBURSA331_A1560	COXBURSA331_A1561	COXBURSA331_A1560	COXBURSA331_A1561
CBUR227377	CBU_1398	CBU_1399	CBU_1402	CBU_1403	CBU_1400	CBU_1401	CBU_1400	CBU_1401
CBLO291272	BPEN_342	BPEN_341	BPEN_338	BPEN_337	BPEN_340	BPEN_339	BPEN_340	BPEN_339
CBLO203907	BFL332	BFL331	BFL328	BFL327	BFL330	BFL329	BFL330	BFL329
CAULO	CC0340	CC0339		CC3529	CC3526	CC3527	CC3526	CC3527
BVIE269482	BCEP1808_1475	BCEP1808_1474	BCEP1808_4411	BCEP1808_4410	BCEP1808_4413	BCEP1808_4412	BCEP1808_4413	BCEP1808_4412
BTRI382640	BT_2675	BT_2676		BT_2545	BT_2542	BT_2543	BT_2542	BT_2543
BTHA271848	BTH_I2555	BTH_I2556	BTH_II0661	BTH_II0660	BTH_II0663	BTH_II0662	BTH_II0362	BTH_II0662
BSUI470137	BSUIS_A1762	BSUIS_A1763		BSUIS_A1744	BSUIS_A1741	BSUIS_A1742	BSUIS_A1741	BSUIS_A1742
BSUI204722	BR_1922	BR_1923		BR_1904	BR_1901	BR_1902	BR_1901	BR_1902
BSP376	BRADO0407	BRADO0406		BRADO0232	BRADO0235	BRADO0234	BRADO0235	BRADO0234
BSP36773	BCEP18194_A4650	BCEP18194_A4649	BCEP18194_B2151	BCEP18194_B2152	BCEP18194_B2149	BCEP18194_B2150	BCEP18194_B2149	BCEP18194_B2150
BPSE320373	BURPS668_1751	BURPS668_1750	BURPS668_A2471	BURPS668_A2472	BURPS668_A2469	BURPS668_A2470	BURPS668_A2469	BURPS668_A2470
BPSE320372	BURPS1710B_A2084	BURPS1710B_A2083	BURPS1710B_B0935	BURPS1710B_B0936	BURPS1710B_B0933	BURPS1710B_B0934	BURPS1710B_B0933	BURPS1710B_B0934
BPSE272560	BPSL1908	BPSL1909	BPSS1719	BPSS1720	BPSS1717	BPSS1718	BPSS1717	BPSS1718
BPET94624	BPET1833	BPET1832	BPET1821	BPET1820	BPET1823	BPET1822	BPET1823	BPET1822
BPER257313	BP1125	BP1124	BP2362	BP2363	BP2360	BP2361	BP2360	BP2361
BPAR257311	BPP3216	BPP3217	BPP3229	BPP3230	BPP3227	BPP3228	BPP3227	BPP3228
BOVI236	GBOORF1920	GBOORF1921		GBOORF1901	GBOORF1898	GBOORF1899	GBOORF1898	GBOORF1899
BMEL359391	BAB1_1922	BAB1_1923		BAB1_1903	BAB1_1900	BAB1_1901	BAB1_1900	BAB1_1901
BMEL224914	BMEI0141	BMEI0140		BMEI0159	BMEI0162	BMEI0161	BMEI0162	BMEI0161
BMAL320389	BMA10247_1001	BMA10247_1000	BMA10247_A0500	BMA10247_A0499	BMA10247_A0502	BMA10247_A0501	BMA10247_A0502	BMA10247_A0501
BMAL320388	BMASAVP1_A1497	BMASAVP1_A1498	BMASAVP1_1622	BMASAVP1_1621	BMASAVP1_1624	BMASAVP1_1623	BMASAVP1_1624	BMASAVP1_1623
BMAL243160	BMA_1051	BMA_1052	BMA_A1748	BMA_A1749	BMA_A1746	BMA_A1747	BMA_A1746	BMA_A1747
BJAP224911	BLL0451	BLL0452		BLR0512	BLR0515	BLR0514	BLR0515	BLR0514
BCEN331272	BCEN2424_1509	BCEN2424_1508	BCEN2424_3935	BCEN2424_3934	BCEN2424_3937	BCEN2424_3936	BCEN2424_3937	BCEN2424_3936
BCEN331271	BCEN_1029	BCEN_1028	BCEN_4432	BCEN_4433	BCEN_4430	BCEN_4431	BCEN_4430	BCEN_4431
BCAN483179	BCAN_A1966	BCAN_A1967		BCAN_A1947	BCAN_A1944	BCAN_A1945	BCAN_A1944	BCAN_A1945
BBRO257310	BB3668	BB3669	BB3681	BB3682	BB3679	BB3680	BB3679	BB3680
BBAC360095	BARBAKC583_0026	BARBAKC583_0025		BARBAKC583_0088	BARBAKC583_0091	BARBAKC583_0090	BARBAKC583_0091	BARBAKC583_0090
BAMB398577	BAMMC406_1431	BAMMC406_1430	BAMMC406_3828	BAMMC406_3827	BAMMC406_3830	BAMMC406_3829	BAMMC406_3830	BAMMC406_3829
BAMB339670	BAMB_1391	BAMB_1390	BAMB_3312	BAMB_3311	BAMB_3314	BAMB_3313	BAMB_3314	BAMB_3313
BABO262698	BRUAB1_1898	BRUAB1_1899		BRUAB1_1880	BRUAB1_1877	BRUAB1_1878	BRUAB1_1877	BRUAB1_1878
ASP76114	EBA6684	EBA6685	EBB235	EBD20	EBA6689	EBA6690	EBA4578	EBA6690
ASP62977	ACIAD2875	ACIAD2876	ACIAD2881	ACIAD2882	ACIAD2879	ACIAD2880	ACIAD2879	ACIAD2880
ASP62928	AZO1556	AZO1555	AZO1550	AZO1549	AZO1552	AZO1551	AZO1552	AZO1551
ASP232721	AJS_1823	AJS_1822	AJS_2794	AJS_2793	AJS_2796	AJS_2795	AJS_2796	AJS_2795
ASAL382245	ASA_2356	ASA_2357	ASA_2360	ASA_2361	ASA_2358	ASA_2359	ASA_1104	ASA_1105
APHA212042	APH_1198	APH_0863		APH_0999	APH_0162	APH_0161	APH_0162	APH_0158
AHYD196024	AHA_1928	AHA_1927	AHA_1924	AHA_1923	AHA_1926	AHA_1925	AHA_3209	AHA_3208
AEHR187272	MLG_2608	MLG_2609		MLG_1332	MLG_1335	MLG_1334	MLG_1335	MLG_1334
ACRY349163	ACRY_1622	ACRY_1623		ACRY_1879	ACRY_1882	ACRY_1881	ACRY_1882	ACRY_1881
ABOR393595	ABO_1495	ABO_1496	ABO_1499	ABO_1500	ABO_1497	ABO_1498	ABO_1497	ABO_1498
ABAU360910	BAV1204	BAV1203	BAV1183	BAV1182	BAV1185	BAV1184	BAV1185	BAV1184
AAVE397945	AAVE_3247	AAVE_3248	AAVE_2203	AAVE_2204	AAVE_2201	AAVE_2202	AAVE_2201	AAVE_2202

Organism features enriched in list (features available for 216 out of the 233 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	1.654e-6	15	92
Disease:Brucellosis	0.0067787	5	5
Disease:Bubonic_plague	0.0024746	6	6
Disease:Dysentery	0.0024746	6	6
Disease:Gastroenteritis	0.0031941	10	13
Disease:Tularemia	0.0067787	5	5
Endospores:No	2.775e-14	37	211
GC_Content_Range4:0-40	3.756e-18	32	213
GC_Content_Range4:40-60	0.0000403	105	224
GC_Content_Range4:60-100	3.750e-7	79	145
GC_Content_Range7:0-30	0.0011752	8	47
GC_Content_Range7:30-40	6.944e-14	24	166
GC_Content_Range7:50-60	6.873e-8	64	107
GC_Content_Range7:60-70	2.306e-9	79	134
Genome_Size_Range5:0-2	5.906e-10	27	155
Genome_Size_Range5:2-4	3.129e-7	46	197
Genome_Size_Range5:4-6	7.967e-18	115	184
Genome_Size_Range5:6-10	0.0005993	28	47
Genome_Size_Range9:0-1	0.0018797	3	27
Genome_Size_Range9:1-2	2.934e-7	24	128
Genome_Size_Range9:2-3	1.074e-8	19	120
Genome_Size_Range9:4-5	6.596e-8	59	96
Genome_Size_Range9:5-6	2.604e-8	56	88
Genome_Size_Range9:6-8	0.0000384	26	38
Gram_Stain:Gram_Neg	4.435e-44	199	333
Habitat:Specialized	0.0000458	7	53
Motility:No	2.514e-12	22	151
Motility:Yes	1.617e-8	131	267
Optimal_temp.:-	0.0000154	119	257
Optimal_temp.:25-30	0.0000230	16	19
Optimal_temp.:37	0.0019739	27	106
Oxygen_Req:Aerobic	1.469e-6	94	185
Oxygen_Req:Anaerobic	2.268e-20	2	102
Oxygen_Req:Facultative	0.0008785	91	201
Pathogenic_in:No	0.0001584	64	226
Pathogenic_in:Plant	0.0035244	11	15
Shape:Coccus	1.199e-6	12	82
Shape:Rod	9.705e-14	170	347
Shape:Sphere	0.0082576	2	19
Shape:Spiral	0.0001277	3	34
Temp._range:Mesophilic	0.0087557	185	473
Temp._range:Psychrophilic	0.0018772	8	9
Temp._range:Thermophilic	1.112e-6	1	35

ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 190
Effective number of orgs (counting one per cluster within 468 clusters): 154

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
ZMOB264203 ncbi	Zymomonas mobilis mobilis ZM4	0
UURE95667	Ureaplasma urealyticum serovar 13	0
UURE95664	Ureaplasma urealyticum serovar 10	0
UPAR505682 ncbi	Ureaplasma parvum serovar 3 str. ATCC 27815	0
UMET351160 ncbi	uncultured methanogenic archaeon RC-I	1
TWHI218496 ncbi	Tropheryma whipplei TW08/27	1
TWHI203267 ncbi	Tropheryma whipplei Twist	1
TTEN273068 ncbi	Thermoanaerobacter tengcongensis MB4	0
TSP28240	Thermotoga sp.	0
TSP1755	Thermoanaerobacter sp.	0
TPSE340099 ncbi	Thermoanaerobacter pseudethanolicus ATCC 33223	0
TPET390874 ncbi	Thermotoga petrophila RKU-1	0
TPEN368408 ncbi	Thermofilum pendens Hrk 5	0
TPAL243276 ncbi	Treponema pallidum pallidum Nichols	0
TMAR243274 ncbi	Thermotoga maritima MSB8	0
TLET416591 ncbi	Thermotoga lettingae TMO	0
TKOD69014 ncbi	Thermococcus kodakarensis KOD1	0
TDEN243275 ncbi	Treponema denticola ATCC 35405	0
SWOL335541 ncbi	Syntrophomonas wolfei wolfei Goettingen	0
STHE322159 ncbi	Streptococcus thermophilus LMD-9	0
STHE299768 ncbi	Streptococcus thermophilus CNRZ1066	0
STHE264199 ncbi	Streptococcus thermophilus LMG 18311	0
SSUI391296 ncbi	Streptococcus suis 98HAH33	0
SSUI391295 ncbi	Streptococcus suis 05ZYH33	0
SSP84588 ncbi	Synechococcus sp. WH 8102	0
SSP64471 ncbi	Synechococcus sp. CC9311	0
SSP1131	Synechococcus sp. CC9605	0
SPYO370554 ncbi	Streptococcus pyogenes MGAS10750	0
SPYO370553 ncbi	Streptococcus pyogenes MGAS2096	0
SPYO370552 ncbi	Streptococcus pyogenes MGAS10270	0
SPYO370551 ncbi	Streptococcus pyogenes MGAS9429	0
SPYO319701 ncbi	Streptococcus pyogenes MGAS6180	0
SPYO293653 ncbi	Streptococcus pyogenes MGAS5005	0
SPYO286636 ncbi	Streptococcus pyogenes MGAS10394	0
SPYO198466 ncbi	Streptococcus pyogenes MGAS315	0
SPYO193567 ncbi	Streptococcus pyogenes SSI-1	0
SPYO186103 ncbi	Streptococcus pyogenes MGAS8232	0
SPYO160490 ncbi	Streptococcus pyogenes M1 GAS	0
SPNE488221 ncbi	Streptococcus pneumoniae 70585	0
SPNE487214 ncbi	Streptococcus pneumoniae Hungary19A-6	0
SPNE487213 ncbi	Streptococcus pneumoniae Taiwan19F-14	0
SPNE171101 ncbi	Streptococcus pneumoniae R6	0
SPNE170187 ncbi	Streptococcus pneumoniae G54	0
SPNE1313	Streptococcus pneumoniae	0
SMUT210007 ncbi	Streptococcus mutans UA159	0
SMAR399550 ncbi	Staphylothermus marinus F1	0
SGOR29390	Streptococcus gordonii Challis	0
SELO269084 ncbi	Synechococcus elongatus PCC 6301	0
SAGA211110 ncbi	Streptococcus agalactiae NEM316	0
SAGA208435 ncbi	Streptococcus agalactiae 2603V/R	0
SAGA205921 ncbi	Streptococcus agalactiae A909	0
SACI56780 ncbi	Syntrophus aciditrophicus SB	0
RALB246199	Ruminococcus albus 8	0
PRUM264731 ncbi	Prevotella ruminicola 23	0
PPEN278197 ncbi	Pediococcus pentosaceus ATCC 25745	0
PMOB403833 ncbi	Petrotoga mobilis SJ95	0
PMAR93060 ncbi	Prochlorococcus marinus MIT 9215	0
PMAR74547 ncbi	Prochlorococcus marinus MIT 9313	0
PMAR74546 ncbi	Prochlorococcus marinus MIT 9312	0
PMAR59920 ncbi	Prochlorococcus marinus NATL2A	0
PMAR167555 ncbi	Prochlorococcus marinus NATL1A	0
PMAR167546 ncbi	Prochlorococcus marinus MIT 9301	0
PMAR167542 ncbi	Prochlorococcus marinus MIT 9515	0
PMAR167540	Prochlorococcus marinus pastoris MED4ax	0
PMAR167539 ncbi	Prochlorococcus marinus marinus CCMP1375	0
PMAR146891 ncbi	Prochlorococcus marinus AS9601	0
PINT246198	Prevotella intermedia 17	0
PHOR70601 ncbi	Pyrococcus horikoshii OT3	0
PGIN242619 ncbi	Porphyromonas gingivalis W83	0
PFUR186497 ncbi	Pyrococcus furiosus DSM 3638	0
PDIS435591 ncbi	Parabacteroides distasonis ATCC 8503	0
PAST100379	Onion yellows phytoplasma	0
PABY272844 ncbi	Pyrococcus abyssi GE5	0
MTHE349307 ncbi	Methanosaeta thermophila PT	0
MTHE264732 ncbi	Moorella thermoacetica ATCC 39073	0
MTHE187420 ncbi	Methanothermobacter thermautotrophicus Delta H	0
MSYN262723 ncbi	Mycoplasma synoviae 53	0
MSTA339860 ncbi	Methanosphaera stadtmanae DSM 3091	0
MPUL272635 ncbi	Mycoplasma pulmonis UAB CTIP	0
MPNE272634 ncbi	Mycoplasma pneumoniae M129	0
MPEN272633 ncbi	Mycoplasma penetrans HF-2	0
MMYC272632 ncbi	Mycoplasma mycoides mycoides SC str. PG1	0
MMOB267748 ncbi	Mycoplasma mobile 163K	0
MMAZ192952 ncbi	Methanosarcina mazei Go1	0
MMAR444158 ncbi	Methanococcus maripaludis C6	0
MMAR426368 ncbi	Methanococcus maripaludis C7	0
MMAR402880 ncbi	Methanococcus maripaludis C5	0
MMAR368407 ncbi	Methanoculleus marisnigri JR1	0
MMAR267377 ncbi	Methanococcus maripaludis S2	0
MLAB410358 ncbi	Methanocorpusculum labreanum Z	0
MKAN190192 ncbi	Methanopyrus kandleri AV19	0
MJAN243232 ncbi	Methanocaldococcus jannaschii DSM 2661	0
MHYO295358 ncbi	Mycoplasma hyopneumoniae 232	0
MHYO262722 ncbi	Mycoplasma hyopneumoniae 7448	0
MHYO262719 ncbi	Mycoplasma hyopneumoniae J	0
MHUN323259 ncbi	Methanospirillum hungatei JF-1	0
MGEN243273 ncbi	Mycoplasma genitalium G37	0
MFLO265311 ncbi	Mesoplasma florum L1	0
MFLA265072 ncbi	Methylobacillus flagellatus KT	0
MCAP340047 ncbi	Mycoplasma capricolum capricolum ATCC 27343	0
MBUR259564 ncbi	Methanococcoides burtonii DSM 6242	0
MBAR269797 ncbi	Methanosarcina barkeri Fusaro	0
MART243272 ncbi	Mycoplasma arthritidis 158L3-1	0
MAEO419665 ncbi	Methanococcus aeolicus Nankai-3	0
MACE188937 ncbi	Methanosarcina acetivorans C2A	0
LWEL386043 ncbi	Listeria welshimeri serovar 6b str. SLCC5334	0
LSAK314315 ncbi	Lactobacillus sakei sakei 23K	0
LREU557436 ncbi	Lactobacillus reuteri DSM 20016	0
LPLA220668 ncbi	Lactobacillus plantarum WCFS1	0
LMON265669 ncbi	Listeria monocytogenes 4b F2365	0
LMON169963 ncbi	Listeria monocytogenes EGD-e	0
LMES203120 ncbi	Leuconostoc mesenteroides mesenteroides ATCC 8293	0
LLAC272623 ncbi	Lactococcus lactis lactis Il1403	0
LLAC272622 ncbi	Lactococcus lactis cremoris SK11	0
LJOH257314 ncbi	Lactobacillus johnsonii NCC 533	0
LINT363253 ncbi	Lawsonia intracellularis PHE/MN1-00	0
LINN272626 ncbi	Listeria innocua Clip11262	0
LHEL405566 ncbi	Lactobacillus helveticus DPC 4571	0
LGAS324831 ncbi	Lactobacillus gasseri ATCC 33323	0
LDEL390333 ncbi	Lactobacillus delbrueckii bulgaricus ATCC 11842	0
LDEL321956 ncbi	Lactobacillus delbrueckii bulgaricus ATCC BAA-365	0
LCAS321967 ncbi	Lactobacillus casei ATCC 334	1
LBRE387344 ncbi	Lactobacillus brevis ATCC 367	0
LACI272621 ncbi	Lactobacillus acidophilus NCFM	0
HPYL85963 ncbi	Helicobacter pylori J99	0
HPYL357544 ncbi	Helicobacter pylori HPAG1	0
HPY ncbi	Helicobacter pylori 26695	0
HMOD498761 ncbi	Heliobacterium modesticaldum Ice1	0
HHEP235279 ncbi	Helicobacter hepaticus ATCC 51449	1
HACI382638 ncbi	Helicobacter acinonychis Sheeba	0
FSUC59374 ncbi	Fibrobacter succinogenes succinogenes S85	0
FNUC190304 ncbi	Fusobacterium nucleatum nucleatum ATCC 25586	0
FNOD381764 ncbi	Fervidobacterium nodosum Rt17-B1	0
FMAG334413 ncbi	Finegoldia magna ATCC 29328	0
EFAE226185 ncbi	Enterococcus faecalis V583	0
DVUL882 ncbi	Desulfovibrio vulgaris Hildenborough	1
DSP255470 ncbi	Dehalococcoides sp. CBDB1	0
DSP216389 ncbi	Dehalococcoides sp. BAV1	0
DRED349161 ncbi	Desulfotomaculum reducens MI-1	0
DPSY177439 ncbi	Desulfotalea psychrophila LSv54	0
DOLE96561 ncbi	Desulfococcus oleovorans Hxd3	0
DHAF138119 ncbi	Desulfitobacterium hafniense Y51	0
DETH243164 ncbi	Dehalococcoides ethenogenes 195	0
DDES207559 ncbi	Desulfovibrio desulfuricans desulfuricans G20	1
CVES412965 ncbi	Candidatus Vesicomyosocius okutanii HA	0
CTET212717 ncbi	Clostridium tetani E88	0
CRUT413404 ncbi	Candidatus Ruthia magnifica Cm (Calyptogena magnifica)	0
CPHY357809 ncbi	Clostridium phytofermentans ISDg	0
CPER289380 ncbi	Clostridium perfringens SM101	0
CPER195103 ncbi	Clostridium perfringens ATCC 13124	0
CPER195102 ncbi	Clostridium perfringens 13	0
CNOV386415 ncbi	Clostridium novyi NT	0
CMET456442 ncbi	Candidatus Methanoregula boonei 6A8	1
CKLU431943 ncbi	Clostridium kluyveri DSM 555	1
CJEJ360109 ncbi	Campylobacter jejuni doylei 269.97	1
CJEJ195099 ncbi	Campylobacter jejuni RM1221	1
CJEJ192222 ncbi	Campylobacter jejuni jejuni NCTC 11168	1
CJEI306537 ncbi	Corynebacterium jeikeium K411	1
CHOM360107 ncbi	Campylobacter hominis ATCC BAA-381	1
CFET360106 ncbi	Campylobacter fetus fetus 82-40	1
CDIP257309 ncbi	Corynebacterium diphtheriae NCTC 13129	1
CDIF272563 ncbi	Clostridium difficile 630	0
CDES477974 ncbi	Candidatus Desulforudis audaxviator MP104C	0
CCON360104 ncbi	Campylobacter concisus 13826	0
CBOT536232 ncbi	Clostridium botulinum A2 str. Kyoto	1
CBOT515621 ncbi	Clostridium botulinum Ba4 str. 657	0
CBOT508765 ncbi	Clostridium botulinum B str. Eklund 17B	0
CBOT498213 ncbi	Clostridium botulinum B1 str. Okra	1
CBOT441772 ncbi	Clostridium botulinum F str. Langeland	1
CBOT441771 ncbi	Clostridium botulinum A str. Hall	1
CBOT441770 ncbi	Clostridium botulinum A str. ATCC 19397	1
CBOT36826	Clostridium botulinum A	1
CBEI290402 ncbi	Clostridium beijerinckii NCIMB 8052	0
CACE272562 ncbi	Clostridium acetobutylicum ATCC 824	0
BTUR314724 ncbi	Borrelia turicatae 91E135	0
BTHE226186 ncbi	Bacteroides thetaiotaomicron VPI-5482	0
BHER314723 ncbi	Borrelia hermsii DAH	0
BGAR290434 ncbi	Borrelia garinii PBi	0
BFRA295405 ncbi	Bacteroides fragilis YCH46	0
BFRA272559 ncbi	Bacteroides fragilis NCTC 9343	0
BCIC186490	Candidatus Baumannia cicadellinicola	0
BBUR224326 ncbi	Borrelia burgdorferi B31	0
BAFZ390236 ncbi	Borrelia afzelii PKo	0
AYEL322098 ncbi	Aster yellows witches-broom phytoplasma AYWB	0
AURANTIMONAS	Aurantimonas manganoxydans SI85-9A1	0
AORE350688 ncbi	Alkaliphilus oremlandii OhILAs	0
AMET293826 ncbi	Alkaliphilus metalliredigens QYMF	0
ALAI441768 ncbi	Acholeplasma laidlawii PG-8A	0
AFER243159 ncbi	Acidithiobacillus ferrooxidans ATCC 23270	0
ABUT367737 ncbi	Arcobacter butzleri RM4018	0

Names of the homologs of the genes in the group in each of these orgs

	EG10980	EG10979	EG10934	EG10933	EG10932	EG10931	EG10331	EG10330
ZMOB264203
UURE95667
UURE95664
UPAR505682
UMET351160	RRC124
TWHI218496	TW0243
TWHI203267	TW503
TTEN273068
TSP28240
TSP1755
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TDEN243275
SWOL335541
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP1131
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SGOR29390
SELO269084
SAGA211110
SAGA208435
SAGA205921
SACI56780
RALB246199
PRUM264731
PPEN278197
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PAST100379
PABY272844
MTHE349307
MTHE264732
MTHE187420
MSYN262723
MSTA339860
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LWEL386043
LSAK314315
LREU557436
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967	LSEI_1307
LBRE387344
LACI272621
HPYL85963
HPYL357544
HPY
HMOD498761
HHEP235279								HH_0686
HACI382638
FSUC59374
FNUC190304
FNOD381764
FMAG334413
EFAE226185
DVUL882					DVU_3263
DSP255470
DSP216389
DRED349161
DPSY177439
DOLE96561
DHAF138119
DETH243164
DDES207559								DDE_1257
CVES412965
CTET212717
CRUT413404
CPHY357809
CPER289380
CPER195103
CPER195102
CNOV386415
CMET456442							MBOO_0085
CKLU431943	CKL_2269
CJEJ360109								JJD26997_1548
CJEJ195099								CJE_0488
CJEJ192222								CJ0437
CJEI306537		JK1373
CHOM360107								CHAB381_0857
CFET360106							CFF8240_0414
CDIP257309		DIP1002
CDIF272563
CDES477974
CCON360104
CBOT536232	CLM_1874
CBOT515621
CBOT508765
CBOT498213	CLD_2922
CBOT441772	CLI_1710
CBOT441771	CLC_1659
CBOT441770	CLB_1650
CBOT36826	CBO1633
CBEI290402
CACE272562
BTUR314724
BTHE226186
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
AORE350688
AMET293826
ALAI441768
AFER243159
ABUT367737

Organism features enriched in list (features available for 176 out of the 190 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	5.374e-16	62	92
Disease:Botulism	0.0024088	5	5
Disease:Wide_range_of_infections	1.517e-6	11	11
Endospores:No	9.990e-9	94	211
GC_Content_Range4:0-40	1.100e-22	117	213
GC_Content_Range4:40-60	0.0018103	53	224
GC_Content_Range4:60-100	8.096e-20	5	145
GC_Content_Range7:0-30	6.628e-11	35	47
GC_Content_Range7:30-40	2.826e-10	82	166
GC_Content_Range7:50-60	0.0002566	18	107
GC_Content_Range7:60-70	1.143e-17	5	134
Genome_Size_Range5:0-2	2.459e-19	92	155
Genome_Size_Range5:4-6	1.318e-15	17	184
Genome_Size_Range5:6-10	4.488e-7	1	47
Genome_Size_Range9:0-1	0.0000549	18	27
Genome_Size_Range9:1-2	7.631e-14	74	128
Genome_Size_Range9:4-5	7.452e-6	12	96
Genome_Size_Range9:5-6	1.301e-9	5	88
Genome_Size_Range9:6-8	0.0000122	1	38
Gram_Stain:Gram_Neg	6.361e-15	58	333
Gram_Stain:Gram_Pos	1.379e-8	73	150
Habitat:Terrestrial	0.0045143	3	31
Motility:No	0.0000365	65	151
Optimal_temp.:-	0.0021358	63	257
Optimal_temp.:25-30	0.0081727	1	19
Optimal_temp.:30-35	0.0002100	7	7
Optimal_temp.:37	3.073e-6	52	106
Oxygen_Req:Aerobic	2.760e-19	13	185
Oxygen_Req:Anaerobic	7.132e-26	77	102
Pathogenic_in:Animal	0.0005942	9	66
Pathogenic_in:Swine	0.0024088	5	5
Salinity:Non-halophilic	0.0001169	48	106
Shape:Coccus	0.0001620	39	82
Shape:Irregular_coccus	8.926e-6	14	17
Shape:Rod	1.141e-11	68	347
Shape:Sphere	1.037e-6	16	19
Shape:Spiral	0.0008311	19	34

ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 40
Effective number of orgs (counting one per cluster within 468 clusters): 26

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	Pvalue	# genes in tgt genome found in org	# genes in group found in org
RTYP257363 ncbi	Rickettsia typhi Wilmington	9.080e-7	388	8
RCAN293613 ncbi	Rickettsia canadensis McKiel	1.284e-6	405	8
NSEN222891 ncbi	Neorickettsia sennetsu Miyayama	3.667e-6	250	7
APHA212042 ncbi	Anaplasma phagocytophilum HZ	0.0000247	328	7
ERUM254945 ncbi	Ehrlichia ruminantium Welgevonden	0.0000299	337	7
ERUM302409 ncbi	Ehrlichia ruminantium Gardel	0.0000318	340	7
ECAN269484 ncbi	Ehrlichia canis Jake	0.0000438	356	7
CBLO203907 ncbi	Candidatus Blochmannia floridanus	0.0000625	656	8
WPIP955	Wolbachia pipientis	0.0000731	383	7
RPRO272947 ncbi	Rickettsia prowazekii Madrid E	0.0000815	389	7
CBLO291272 ncbi	Candidatus Blochmannia pennsylvanicus BPEN	0.0000960	692	8
RAKA293614 ncbi	Rickettsia akari Hartford	0.0001301	416	7
RRIC392021 ncbi	Rickettsia rickettsii Sheila Smith	0.0001301	416	7
RRIC452659 ncbi	Rickettsia rickettsii Iowa	0.0001486	424	7
RCON272944 ncbi	Rickettsia conorii Malish 7	0.0001666	431	7
RMAS416276 ncbi	Rickettsia massiliae MTU5	0.0001955	441	7
RBEL391896 ncbi	Rickettsia bellii OSU 85-389	0.0002744	463	7
RFEL315456 ncbi	Rickettsia felis URRWXCal2	0.0003526	480	7
RBEL336407 ncbi	Rickettsia bellii RML369-C	0.0003736	484	7
OTSU357244 ncbi	Orientia tsutsugamushi Boryong	0.0003925	274	6
FTUL458234 ncbi	Francisella tularensis holarctica FTNF002-00	0.0010057	927	8
FTUL393011 ncbi	Francisella tularensis holarctica OSU18	0.0010144	928	8
WPIP80849	Wolbachia endosymbiont of Brugia malayi	0.0012522	333	6
FRANT ncbi	Francisella tularensis tularensis SCHU S4	0.0012664	954	8
FTUL393115 ncbi	Francisella tularensis tularensis FSC198	0.0013097	958	8
FTUL351581	Francisella tularensis holarctica FSC200	0.0013097	958	8
FTUL418136 ncbi	Francisella tularensis tularensis WY96-3418	0.0015084	975	8
AMAR234826 ncbi	Anaplasma marginale St. Maries	0.0015447	345	6
CPEL335992 ncbi	Candidatus Pelagibacter ubique HTCC1062	0.0017177	603	7
CBUR360115 ncbi	Coxiella burnetii RSA 331	0.0018043	997	8
ECHA205920 ncbi	Ehrlichia chaffeensis Arkansas	0.0018915	357	6
CBUR227377 ncbi	Coxiella burnetii RSA 493	0.0020180	1011	8
CBUR434922 ncbi	Coxiella burnetii Dugway 5J108-111	0.0027978	1053	8
FTUL401614 ncbi	Francisella novicida U112	0.0028192	1054	8
FPHI484022 ncbi	Francisella philomiragia philomiragia ATCC 25017	0.0039722	1100	8
BBAC360095 ncbi	Bartonella bacilliformis KC583	0.0057366	718	7
NGON242231 ncbi	Neisseria gonorrhoeae FA 1090	0.0074663	1190	8
NMEN374833 ncbi	Neisseria meningitidis 053442	0.0089389	1217	8
PSP312153 ncbi	Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1	0.0093598	1224	8
NMEN122586 ncbi	Neisseria meningitidis MC58	0.0096081	1228	8

Names of the homologs of the genes in the group in each of these orgs

	EG10980	EG10979	EG10934	EG10933	EG10932	EG10931	EG10331	EG10330
RTYP257363	RT0170	RT0171	RT0116	RT0115	RT0086	RT0117	RT0086	RT0117
RCAN293613	A1E_00935	A1E_00930	A1E_00650	A1E_00640	A1E_00210	A1E_00655	A1E_00210	A1E_00655
NSEN222891	NSE_0548	NSE_0578		NSE_0047	NSE_0534	NSE_0376	NSE_0534	NSE_0376
APHA212042	APH_1198	APH_0863		APH_0999	APH_0162	APH_0161	APH_0162	APH_0158
ERUM254945	ERWE_CDS_08690	ERWE_CDS_02690		ERWE_CDS_01890	ERWE_CDS_07150	ERWE_CDS_07160	ERWE_CDS_07150	ERWE_CDS_07160
ERUM302409	ERGA_CDS_08590	ERGA_CDS_02650		ERGA_CDS_01840	ERGA_CDS_07070	ERGA_CDS_07080	ERGA_CDS_07070	ERGA_CDS_07080
ECAN269484	ECAJ_0857	ECAJ_0255		ECAJ_0189	ECAJ_0687	ECAJ_0688	ECAJ_0687	ECAJ_0688
CBLO203907	BFL332	BFL331	BFL328	BFL327	BFL330	BFL329	BFL330	BFL329
WPIP955	WD_0544	WD_1309		WD_1221	WD_0727	WD_0437	WD_0727	WD_0437
RPRO272947	RP179	RP180		RP126	RP044	RP128	RP044	RP128
CBLO291272	BPEN_342	BPEN_341	BPEN_338	BPEN_337	BPEN_340	BPEN_339	BPEN_340	BPEN_339
RAKA293614	A1C_01295	A1C_01300		A1C_00930	A1C_00380	A1C_00955	A1C_00380	A1C_00955
RRIC392021	A1G_01290	A1G_01300		A1G_00965	A1G_00440	A1G_00980	A1G_00440	A1G_00980
RRIC452659	RRIOWA_0280	RRIOWA_0282		RRIOWA_0209	RRIOWA_0091	RRIOWA_0211	RRIOWA_0091	RRIOWA_0211
RCON272944	RC0226	RC0227		RC0168	RC0069	RC0170	RC0069	RC0170
RMAS416276	RMA_0238	RMA_0239		RMA_0176	RMA_0075	RMA_0178	RMA_0075	RMA_0178
RBEL391896	A1I_01835	A1I_01830		A1I_01440	A1I_07725	A1I_01460	A1I_07725	A1I_01460
RFEL315456	RF_1093	RF_1092		RF_1163	RF_0136	RF_1159	RF_0136	RF_1159
RBEL336407	RBE_1098	RBE_1099		RBE_1168	RBE_1390	RBE_1164	RBE_1390	RBE_1164
OTSU357244	OTBS_1491	OTBS_1490			OTBS_1699	OTBS_1698	OTBS_1699	OTBS_1698
FTUL458234	FTA_1889	FTA_1890	FTA_1893	FTA_1894	FTA_1891	FTA_1892	FTA_1891	FTA_1892
FTUL393011	FTH_1719	FTH_1720	FTH_1723	FTH_1724	FTH_1721	FTH_1722	FTH_1721	FTH_1722
WPIP80849	WB_0178	WB_0591			WB_0917	WB_0681	WB_0917	WB_0681
FRANT	SUCB	SUCA	SDHD	SDHC	SDHB	SDHA	SDHB	SDHA
FTUL393115	FTF0077	FTF0076	FTF0073	FTF0072	FTF0075	FTF0074	FTF0075	FTF0074
FTUL351581	FTL_1783	FTL_1784	FTL_1787	FTL_1788	FTL_1785	FTL_1786	FTL_1785	FTL_1786
FTUL418136	FTW_0153	FTW_0152	FTW_0149	FTW_0148	FTW_0151	FTW_0150	FTW_0151	FTW_0150
AMAR234826	AM1087	AM405		AM290	AM169	AM168		AM168
CPEL335992	SAR11_0236	SAR11_0237		SAR11_1721	SAR11_0242	SAR11_0243	SAR11_0242	SAR11_0243
CBUR360115	COXBURSA331_A1558	COXBURSA331_A1559	COXBURSA331_A1562	COXBURSA331_A1563	COXBURSA331_A1560	COXBURSA331_A1561	COXBURSA331_A1560	COXBURSA331_A1561
ECHA205920	ECH_1065	ECH_0832		ECH_0918	ECH_0316	ECH_0315		ECH_0315
CBUR227377	CBU_1398	CBU_1399	CBU_1402	CBU_1403	CBU_1400	CBU_1401	CBU_1400	CBU_1401
CBUR434922	COXBU7E912_0595	COXBU7E912_0594	COXBU7E912_0591	COXBU7E912_0590	COXBU7E912_0593	COXBU7E912_0592	COXBU7E912_0593	COXBU7E912_0592
FTUL401614	FTN_1634	FTN_1635	FTN_1638	FTN_1639	FTN_1636	FTN_1637	FTN_1636	FTN_1637
FPHI484022	FPHI_0974	FPHI_0973	FPHI_0970	FPHI_0969	FPHI_0972	FPHI_0971	FPHI_0972	FPHI_0971
BBAC360095	BARBAKC583_0026	BARBAKC583_0025		BARBAKC583_0088	BARBAKC583_0091	BARBAKC583_0090	BARBAKC583_0091	BARBAKC583_0090
NGON242231	NGO0916	NGO0917	NGO0922	NGO0923	NGO0920	NGO0921	NGO0920	NGO0921
NMEN374833	NMCC_0899	NMCC_0898	NMCC_0893	NMCC_0892	NMCC_0895	NMCC_0894	NMCC_0895	NMCC_0894
PSP312153	PNUC_0841	PNUC_0840	PNUC_0759	PNUC_0758	PNUC_0761	PNUC_0760	PNUC_0761	PNUC_0760
NMEN122586	NMB_0956	NMB_0955	NMB_0949	NMB_0948	NMB_0951	NMB_0950	NMB_0951	NMB_0950

Organism features enriched in list (features available for 37 out of the 40 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Disease:Q_fever	0.0039257	2	2
Disease:Rocky_Mountain_Spotted_Fever	0.0002365	3	3
Disease:Tularemia	7.901e-7	5	5
Disease:epidemic_typhus	0.0039257	2	2
Endospores:No	7.923e-6	2	211
GC_Content_Range4:0-40	2.929e-6	27	213
GC_Content_Range7:0-30	0.0047606	8	47
GC_Content_Range7:30-40	0.0013876	19	166
Genome_Size_Range5:0-2	1.235e-11	29	155
Genome_Size_Range9:1-2	7.898e-11	26	128
Gram_Stain:Gram_Neg	0.0000690	32	333
Habitat:Host-associated	0.0003896	23	206
Motility:Yes	1.821e-9	1	267
Optimal_temp.:-	1.937e-6	30	257
Oxygen_Req:Aerobic	0.0000611	23	185
Oxygen_Req:Facultative	0.0001269	3	201
Pathogenic_in:Human	0.0002086	24	213
Pathogenic_in:No	2.004e-6	2	226
Salinity:Non-halophilic	0.0040632	1	106
Shape:Pleomorphic_coccus	0.0039257	2	2

ORGANISMS DEPLETED FOR GROUP:

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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group

Pathway or complex	# Orgs containing it	# of those orgs also containing candidate	Pearson Coeff
PWY-5918 (heme biosynthesis I)	272	215	0.7576
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)	286	215	0.7192
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))	291	216	0.7126
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))	300	219	0.7091
PWY0-1319 (CDP-diacylglycerol biosynthesis II)	296	217	0.7061
PHOSLIPSYN-PWY (phospholipid biosynthesis I)	290	211	0.6820
PWY-1269 (CMP-KDO biosynthesis I)	325	222	0.6671
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))	183	160	0.6668
GLYCOCAT-PWY (glycogen degradation I)	246	190	0.6650
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)	195	163	0.6443
PWY-5913 (TCA cycle variation IV)	301	209	0.6401
PWY-4041 (γ-glutamyl cycle)	279	200	0.6381
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))	191	160	0.6372
KDO-LIPASYN-PWY (KDO₂-lipid A biosynthesis I)	225	176	0.6343
NAGLIPASYN-PWY (lipid IV_A biosynthesis)	348	224	0.6270
TYRFUMCAT-PWY (tyrosine degradation I)	184	155	0.6267
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)	149	136	0.6243
GLUTATHIONESYN-PWY (glutathione biosynthesis)	339	220	0.6209
*PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)*	218	168	0.6014
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))	255	181	0.5777
AST-PWY (arginine degradation II (AST pathway))	120	113	0.5730
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))	398	231	0.5673
ECASYN-PWY (enterobacterial common antigen biosynthesis)	191	150	0.5653
PWY-5084 (2-ketoglutarate dehydrogenase complex)	326	207	0.5651
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)	329	204	0.5380
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)	176	137	0.5244
DAPLYSINESYN-PWY (lysine biosynthesis I)	342	206	0.5206
PWY-5028 (histidine degradation II)	130	111	0.5092
PWY-5669 (phosphatidylethanolamine biosynthesis I)	416	226	0.4959
KDOSYN-PWY (KDO transfer to lipid IV_A I)	180	135	0.4953
CHOLINE-BETAINE-ANA-PWY (choline degradation I)	135	112	0.4953
REDCITCYC (TCA cycle variation II)	174	132	0.4948
KDO-NAGLIPASYN-PWY (superpathway of KDO₂-lipid A biosynthesis)	179	134	0.4916
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))	138	113	0.4904
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)	96	89	0.4879
PWY-5188 (tetrapyrrole biosynthesis I)	439	231	0.4859
PWY-5148 (acyl-CoA hydrolysis)	227	155	0.4832
P344-PWY (acrylonitrile degradation)	210	147	0.4804
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)	249	164	0.4800
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)	249	164	0.4800
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)	112	97	0.4761
P601-PWY (D-camphor degradation)	95	87	0.4750
PWY-3162 (tryptophan degradation V (side chain pathway))	94	86	0.4712
PWY0-501 (lipoate biosynthesis and incorporation I)	385	213	0.4712
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)	156	119	0.4644
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)	374	208	0.4614
PWY-5386 (methylglyoxal degradation I)	305	181	0.4442
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)	178	127	0.4437
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)	300	179	0.4435
GALACTCAT-PWY (D-galactonate degradation)	104	88	0.4368
PWY1-3 (polyhydroxybutyrate biosynthesis)	115	94	0.4360
GLUCONSUPER-PWY (D-gluconate degradation)	229	149	0.4359
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))	289	173	0.4318
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)	422	218	0.4270
PWY-46 (putrescine biosynthesis III)	138	105	0.4265
PWY-5783 (octaprenyl diphosphate biosynthesis)	165	118	0.4232
LIPASYN-PWY (phospholipases)	212	139	0.4181
PWY-561 (superpathway of glyoxylate cycle)	162	115	0.4115
GALACTITOLCAT-PWY (galactitol degradation)	73	67	0.4095
GLYOXYLATE-BYPASS (glyoxylate cycle)	169	118	0.4088
PWY-4302 (aerobic respiration -- electron donor III)	214	138	0.4049
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))	81	71	0.4015

PAIRWISE GENOME CONTEXT SCORE MATRIX:

	EG10979	EG10934	EG10933	EG10932	EG10931	EG10331	EG10330
EG10980	0.99999	0.999596	0.99965	0.99969	0.999651	0.999432	0.999427
EG10979		0.999628	0.999677	0.999729	0.999677	0.999495	0.999472
EG10934			0.99985	0.999788	0.99985	0.999614	0.999707
EG10933				0.999895	0.999936	0.999757	0.999877
EG10932					0.99999	0.999983	0.999967
EG10931						0.999961	0.999991
EG10331							0.999984
EG10330

PAIRWISE BLAST SCORES:

	EG10980	EG10979	EG10934	EG10933	EG10932	EG10931	EG10331	EG10330
EG10980	0.0f0	-	-	-	-	-	-	-
EG10979	-	0.0f0	-	-	-	-	-	-
EG10934	-	-	0.0f0	-	-	-	-	-
EG10933	-	-	-	0.0f0	-	-	-	-
EG10932	-	-	-	-	0.0f0	-	9.0e-34	-
EG10931	-	-	-	-	-	0.0f0	-	5.7e-103
EG10331	-	-	-	-	9.0e-34	-	0.0f0	-
EG10330	-	-	-	-	-	1.4e-101	-	0.0f0

PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- FUMARATE-REDUCTASE (fumarate reductase) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.250, average score: 0.999)
  Genes in pathway or complex:
             0.5573 0.1147 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.5631 0.1199 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)

- SUCC-DEHASE (succinate dehydrogenase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)

- PWY0-1336 (NADH to fumarate electron transfer) (degree of match pw to cand: 0.118, degree of match cand to pw: 0.250, average score: 0.768)
  Genes in pathway or complex:
             0.5884 0.2308 EG12083 (nuoB) NUOB-MONOMER (NADH:ubiquinone oxidoreductase, chain B)
             0.5960 0.2650 EG12084 (nuoC) NUOC-MONOMER (NADH:ubiquinone oxidoreductase, chain CD)
             0.5686 0.1338 EG12089 (nuoI) NUOI-MONOMER (NADH:ubiquinone oxidoreductase, chain I)
             0.6822 0.3853 EG12086 (nuoE) NUOE-MONOMER (NADH:ubiquinone oxidoreductase, chain E)
             0.8124 0.5087 EG11774 (nuoF) NUOF-MONOMER (NADH:ubiquinone oxidoreductase, chain F)
             0.6274 0.2368 EG12087 (nuoG) NUOG-MONOMER (NADH:ubiquinone oxidoreductase, chain G)
             0.5122 0.1589 EG12093 (nuoN) NUON-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit N)
             0.5272 0.2400 EG11773 (nuoM) NUOM-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit M)
             0.4763 0.1154 EG12092 (nuoL) NUOL-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit L)
             0.7140 0.4533 EG12091 (nuoK) NUOK-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit K)
             0.4973 0.2900 EG12090 (nuoJ) NUOJ-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit J)
             0.5239 0.1198 EG12088 (nuoH) NUOH-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit H)
             0.5201 0.1654 EG12082 (nuoA) NUOA-MONOMER (NADH:ubiquinone oxidoreductase, membrane subunit A)
             0.5573 0.1147 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.5631 0.1199 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)

- FERMENTATION-PWY (mixed acid fermentation) (degree of match pw to cand: 0.071, degree of match cand to pw: 0.250, average score: 0.597)
  Genes in pathway or complex:
             0.7483 0.4478 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.8529 0.6767 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.8205 0.5123 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.8229 0.5147 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.6902 0.5583 G6775 (adhP) ADHP-MONOMER (ethanol dehydrogenase)
             0.6693 0.2289 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4640 0.1472 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.2466 0.1031 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.2378 0.0730 G592 (ldhA) DLACTDEHYDROGNAD-MONOMER (D-lactate dehydrogenase)
             0.5677 0.3031 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.8279 0.7032 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8145 0.6776 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.8782 0.0449 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.3131 0.0029 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
             0.5668 0.4813 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.3422 0.1856 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
             0.2862 0.0005 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.4906 0.2856 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.2547 0.1214 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
             0.5604 0.2620 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.5573 0.1147 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.5631 0.1199 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
             0.9995 0.9992 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.9071 0.6287 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.8078 0.5909 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)

- ANARESP1-PWY (respiration (anaerobic)) (degree of match pw to cand: 0.074, degree of match cand to pw: 0.250, average score: 0.592)
  Genes in pathway or complex:
             0.4640 0.1472 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.2466 0.1031 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.9982 0.9947 EG10543 (lpd) E3-MONOMER (E3 monomer)
             0.8246 0.1416 EG10025 (aceF) ACEF-LIPOATE (AceF-lipoate)
             0.5051 0.1740 EG10024 (aceE) E1P-MONOMER (subunit of E1p component of pyruvate dehydrogenase complex)
             0.9995 0.9992 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.9071 0.6287 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.8078 0.5909 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.3131 0.0029 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
             0.8782 0.0449 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.5677 0.3031 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.8279 0.7032 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8145 0.6776 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.8205 0.5123 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.8229 0.5147 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.3660 0.0683 EG10258 (eno) ENOLASE-MONOMER (Eno)
             0.5668 0.4813 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
             0.3422 0.1856 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
             0.2862 0.0005 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.4906 0.2856 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.2547 0.1214 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
             0.5604 0.2620 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.5573 0.1147 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.5631 0.1199 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)

- PWY-5084 (2-ketoglutarate dehydrogenase complex) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.250, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
             0.9982 0.9947 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)

- TCA (TCA cycle) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.750, average score: 0.801)
  Genes in pathway or complex:
             0.8782 0.0449 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.5677 0.3031 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.8279 0.7032 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8145 0.6776 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.9995 0.9992 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
             0.9995 0.9991 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
             0.9982 0.9947 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
             0.8078 0.5909 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.9995 0.9992 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.9955 0.9935 EG11325 (acnA) ACONITASE-MONOMER (aconitate hydratase 1)
             0.9071 0.6287 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
             0.4634 0.2627 EG12069 (mqo) EG12069-MONOMER (malate:quinone oxidoreductase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)

- TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA) (degree of match pw to cand: 0.300, degree of match cand to pw: 0.750, average score: 0.748)
  Genes in pathway or complex:
             0.7074 0.4757 EG10022 (aceA) ISOCIT-LYASE-MONOMER (isocitrate lyase monomer)
             0.5827 0.2775 EG10023 (aceB) MALATE-SYNTHASE (malate synthase A)
             0.4634 0.2627 EG12069 (mqo) EG12069-MONOMER (malate:quinone oxidoreductase)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
             0.9071 0.6287 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.9955 0.9935 EG11325 (acnA) ACONITASE-MONOMER (aconitate hydratase 1)
             0.9995 0.9992 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.8078 0.5909 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.9982 0.9947 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
             0.9995 0.9992 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
             0.9995 0.9991 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
             0.8145 0.6776 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.8279 0.7032 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.5677 0.3031 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.8782 0.0449 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)

- GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass) (degree of match pw to cand: 0.146, degree of match cand to pw: 0.750, average score: 0.600)
  Genes in pathway or complex:
             0.8782 0.0449 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.5677 0.3031 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.8279 0.7032 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.8145 0.6776 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.9995 0.9992 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
             0.9995 0.9991 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
             0.8078 0.5909 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.9995 0.9992 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.9955 0.9935 EG11325 (acnA) ACONITASE-MONOMER (aconitate hydratase 1)
             0.9071 0.6287 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
             0.4634 0.2627 EG12069 (mqo) EG12069-MONOMER (malate:quinone oxidoreductase)
             0.5827 0.2775 EG10023 (aceB) MALATE-SYNTHASE (malate synthase A)
             0.7074 0.4757 EG10022 (aceA) ISOCIT-LYASE-MONOMER (isocitrate lyase monomer)
             0.2431 0.0036 EG11245 (yggF) EG11245-MONOMER (fructose-1,6-bisphosphatase)
             0.7996 0.2384 EG11239 (ybhA) EG11239-MONOMER (pyridoxal phosphatase / fructose 1,6-bisphosphatase)
             0.2874 0.0036 EG11517 (glpX) EG11517-MONOMER (fructose 1,6-bisphosphatase II)
             0.4407 0.2012 EG10283 (fbp) F16B-MONOMER (fructose-1,6-bisphosphatase monomer)
             0.9502 0.8535 EG10759 (ppsA) PEPSYNTH-MONOMER (phosphoenolpyruvate synthetase)
             0.5298 0.2183 EG10702 (pgi) PGLUCISOM (Pgi)
             0.5862 0.1331 EG10699 (pfkA) 6PFK-1-MONOMER (6-phosphofructokinase-1 monomer)
             0.5182 0.3708 EG10700 (pfkB) 6PFK-2-MONOMER (6-phosphofructokinase-2 monomer)
             0.2596 0.0605 G7129 (fbaB) FRUCBISALD-CLASSI-MONOMER (fructose bisphosphate aldolase monomer)
             0.0731 0.0300 EG10282 (fbaA) FRUCTBISALD-CLASSII-MONOMER (fructose bisphosphate aldolase monomer)
             0.6843 0.3821 EG11015 (tpiA) TPI-MONOMER (triose phosphate isomerase monomer)
             0.5736 0.1792 EG10367 (gapA) GAPDH-A-MONOMER (glyceraldehyde 3-phosphate dehydrogenase-A monomer)
             0.0535 0.0012 EG10703 (pgk) PGK (phosphoglycerate kinase)
             0.2244 0.0040 EG12296 (gpmM) PGMI-MONOMER (phosphoglycerate mutase, cofactor independent)
             0.3851 0.1248 EG12164 (ytjC) PGAM2-MONOMER (phosphoglycerate mutase 2)
             0.9638 0.8780 EG11699 (gpmA) GPMA-MONOMER (phosphoglyceromutase 1 monomer)
             0.3660 0.0683 EG10258 (eno) ENOLASE-MONOMER (Eno)
             0.2466 0.1031 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.4640 0.1472 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.9982 0.9947 EG10543 (lpd) E3-MONOMER (E3 monomer)
             0.8246 0.1416 EG10025 (aceF) ACEF-LIPOATE (AceF-lipoate)
             0.5051 0.1740 EG10024 (aceE) E1P-MONOMER (subunit of E1p component of pyruvate dehydrogenase complex)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)

- PWY0-1353 (succinate to cytochrome bd oxidase electron transfer) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 0.990)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
             0.9275 0.6470 EG10174 (cydB) CYDB-MONOMER (cytochrome bd-I terminal oxidase subunit II)
             0.8684 0.4673 EG10173 (cydA) CYDA-MONOMER (cytochrome bd-I terminal oxidase subunit I)
             0.9322 0.7019 EG11379 (appB) APPB-MONOMER (cytochrome bd-II terminal oxidase subunit II)
             0.8304 0.3456 EG11380 (appC) APPC-MONOMER (cytochrome bd-II terminal oxidase subunit I)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)

- PWY0-1329 (succinate to cytochrome bo oxidase electron transfer) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 0.907)
  Genes in pathway or complex:
             0.7485 0.5107 EG10180 (cyoC) CYOC-MONOMER (cytochrome bo terminal oxidase subunit III)
             0.7993 0.5990 EG10179 (cyoB) CYOB-MONOMER (cytochrome bo terminal oxidase subunit I)
             0.8272 0.6792 EG10178 (cyoA) CYOA-MONOMER (cytochrome bo terminal oxidase subunit II)
             0.9099 0.8595 EG10181 (cyoD) CYOD-MONOMER (cytochrome bo terminal oxidase subunit IV)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)

- 2OXOGLUTARATEDEH-CPLX (2-oxoglutarate dehydrogenase complex) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.250, average score: 1.000)
  Genes in pathway or complex:
             0.9982 0.9947 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9994 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9995 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
   *in cand* 0.9998 0.9994 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
   *in cand* 0.9999 0.9997 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
   *in cand* 0.9999 0.9997 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
   *in cand* 0.9998 0.9997 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
   *in cand* 0.9998 0.9996 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)

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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10931 EG10932 EG10933 EG10934 EG10979 EG10980 (centered at EG10932)
EG10330 EG10331 (centered at EG10330)

ORG:REPLICON:CIRC?\GENE	IN REF LIST	EG10980	EG10979	EG10934	EG10933	EG10932	EG10931	EG10331	EG10330
		392/623	385/623	161/623	251/623	336/623	347/623	330/623	349/623
AAEO224324:0:T	yes	-	-	-	-	-	29	0	29
AAUR290340:2:T	yes	498	1349	-	-	0	1	0	-
AAVE397945:0:T	yes	1030	1031	2	3	0	1	0	1
ABAC204669:0:T	yes	854	0	-	-	-	-	-	-
ABAU360910:0:T	yes	22	21	1	0	3	2	3	2
ABOR393595:0:T	yes	0	1	4	5	2	3	2	3
ACAU438753:0:T	yes	271	273	-	0	3	2	-	2
ACEL351607:0:T	yes	349	0	-	-	-	-	-	-
ACRY349163:8:T	yes	0	1	-	264	267	266	267	266
ADEH290397:0:T	yes	1	0	-	-	-	-	-	-
AEHR187272:0:T	yes	1267	1268	-	0	3	2	3	2
AFUL224325:0:T	yes	-	-	-	-	1	0	1	0
AHYD196024:0:T	yes	5	4	1	0	3	2	1247	1246
AMAR234826:0:T	yes	665	168	-	84	1	0	-	0
AMAR329726:9:T	yes	-	-	-	-	877	0	877	0
ANAE240017:0:T	yes	0	471	-	-	-	-	-	-
APER272557:0:T	yes	-	-	-	-	0	4	0	4
APHA212042:0:T	yes	978	669	-	795	4	3	4	0
APLE416269:0:T	yes	0	1	-	-	1094	1095	1094	1095
APLE434271:0:T	no	0	1	-	-	1084	1085	1084	1085
ASAL382245:5:T	yes	1210	1211	1214	1215	1212	1213	0	1
ASP1667:3:T	yes	492	1532	-	-	0	1	0	-
ASP232721:2:T	yes	1	0	942	941	944	943	944	943
ASP62928:0:T	yes	7	6	1	0	3	2	3	2
ASP62977:0:T	yes	0	1	4	5	2	3	2	3
ASP76114:2:T	yes	1245	1246	1251	1252	1249	1250	0	1250
AVAR240292:3:T	yes	-	-	-	-	0	417	0	417
BABO262698:1:T	no	19	20	-	3	0	1	0	1
BAMB339670:2:T	no	-	-	1	0	3	2	3	2
BAMB339670:3:T	no	1	0	-	-	-	-	-	-
BAMB398577:2:T	no	-	-	1	0	3	2	3	2
BAMB398577:3:T	no	1	0	-	-	-	-	-	-
BAMY326423:0:T	yes	0	1	-	-	-	-	-	-
BANT260799:0:T	no	0	1	-	-	-	-	-	-
BANT261594:2:T	no	0	1	-	-	-	-	-	-
BANT568206:2:T	yes	1	0	-	-	-	-	-	-
BANT592021:2:T	no	0	1	-	-	-	-	-	-
BAPH198804:0:T	yes	1	0	-	-	-	-	-	-
BAPH372461:0:T	yes	1	0	-	-	-	-	-	-
BBAC264462:0:T	yes	1	0	-	-	-	-	-	-
BBAC360095:0:T	yes	1	0	-	62	65	64	65	64
BBRO257310:0:T	yes	0	1	13	14	11	12	11	12
BCAN483179:1:T	no	22	23	-	3	0	1	0	1
BCEN331271:1:T	no	-	-	2	3	0	1	0	1
BCEN331271:2:T	no	1	0	-	-	-	-	-	-
BCEN331272:2:T	yes	-	-	1	0	3	2	3	2
BCEN331272:3:T	yes	1	0	-	-	-	-	-	-
BCER226900:1:T	yes	0	1	-	-	-	-	-	-
BCER288681:0:T	no	0	1	-	-	-	-	-	-
BCER315749:1:T	yes	0	1	-	-	-	-	-	-
BCER405917:1:T	yes	0	1	-	-	-	-	-	-
BCER572264:1:T	no	0	1	-	-	-	-	-	-
BCLA66692:0:T	yes	0	1	-	-	-	-	-	-
BHAL272558:0:T	yes	0	1	-	-	-	-	-	-
BHEN283166:0:T	yes	72	73	-	3	0	1	-	1
BJAP224911:0:F	yes	0	1	-	61	64	63	64	63
BLIC279010:0:T	yes	0	1	-	-	-	-	-	-
BLON206672:0:T	yes	-	-	-	-	1	0	1	0
BMAL243160:0:T	no	-	-	2	3	0	1	0	1
BMAL243160:1:T	no	0	1	-	-	-	-	-	-
BMAL320388:0:T	no	-	-	1	0	3	2	3	2
BMAL320388:1:T	no	0	1	-	-	-	-	-	-
BMAL320389:0:T	yes	-	-	1	0	3	2	3	2
BMAL320389:1:T	yes	1	0	-	-	-	-	-	-
BMEL224914:1:T	no	1	0	-	19	22	21	22	21
BMEL359391:1:T	no	20	21	-	3	0	1	0	1
BOVI236:1:T	yes	20	21	-	3	0	1	0	1
BPAR257311:0:T	no	0	1	12	13	10	11	10	11
BPER257313:0:T	yes	1	0	1115	1116	1113	1114	1113	1114
BPET94624:0:T	yes	13	12	1	0	3	2	3	2
BPSE272560:0:T	yes	-	-	2	3	0	1	0	1
BPSE272560:1:T	yes	0	1	-	-	-	-	-	-
BPSE320372:0:T	no	-	-	2	3	0	1	0	1
BPSE320372:1:T	no	1	0	-	-	-	-	-	-
BPSE320373:0:T	no	-	-	2	3	0	1	0	1
BPSE320373:1:T	no	1	0	-	-	-	-	-	-
BPUM315750:0:T	yes	0	1	-	-	-	-	-	-
BQUI283165:0:T	yes	60	61	-	3	0	1	-	1
BSP107806:2:T	yes	1	0	-	-	-	-	-	-
BSP36773:1:T	yes	-	-	2	3	0	1	0	1
BSP36773:2:T	yes	1	0	-	-	-	-	-	-
BSP376:0:T	yes	159	158	-	0	3	2	3	2
BSUB:0:T	yes	0	1	-	-	-	-	-	-
BSUI204722:1:T	yes	20	21	-	3	0	1	0	1
BSUI470137:1:T	no	21	22	-	3	0	1	0	1
BTHA271848:0:T	no	-	-	298	297	300	299	0	299
BTHA271848:1:T	no	0	1	-	-	-	-	-	-
BTHU281309:1:T	no	0	1	-	-	-	-	-	-
BTHU412694:1:T	no	0	1	-	-	-	-	-	-
BTRI382640:1:T	yes	116	117	-	3	0	1	0	1
BVIE269482:6:T	yes	-	-	1	0	3	2	3	2
BVIE269482:7:T	yes	1	0	-	-	-	-	-	-
BWEI315730:4:T	yes	0	1	-	-	-	-	-	-
BXEN266265:1:T	yes	-	-	1	0	3	2	3	2
CABO218497:0:T	yes	1	0	-	-	-	-	-	-
CAULO:0:T	yes	1	0	-	3240	3237	3238	3237	3238
CBLO203907:0:T	yes	5	4	1	0	3	2	3	2
CBLO291272:0:T	no	5	4	1	0	3	2	3	2
CBOT36826:1:T	no	0	-	-	-	-	-	-	-
CBOT441770:0:T	yes	0	-	-	-	-	-	-	-
CBOT441771:0:T	no	0	-	-	-	-	-	-	-
CBOT441772:1:T	no	0	-	-	-	-	-	-	-
CBOT498213:1:T	no	0	-	-	-	-	-	-	-
CBOT536232:0:T	no	0	-	-	-	-	-	-	-
CBUR227377:1:T	yes	0	1	4	5	2	3	2	3
CBUR360115:1:T	no	0	1	4	5	2	3	2	3
CBUR434922:2:T	no	5	4	1	0	3	2	3	2
CCAV227941:1:T	yes	1	0	-	-	-	-	-	-
CCHL340177:0:T	yes	-	-	-	-	-	0	1	0
CCUR360105:0:T	yes	-	-	-	-	-	0	462	0
CDIP257309:0:T	yes	-	0	-	-	-	-	-	-
CEFF196164:0:F	yes	928	0	-	-	-	-	-	-
CFEL264202:1:T	yes	0	1	-	-	-	-	-	-
CFET360106:0:T	yes	-	-	-	-	-	-	0	-
CGLU196627:0:T	yes	1044	0	-	-	-	-	-	-
CHOM360107:1:T	yes	-	-	-	-	-	-	-	0
CHUT269798:0:T	yes	0	1	-	-	-	-	-	-
CHYD246194:0:T	yes	-	-	-	-	1271	0	1271	1274
CJAP155077:0:T	yes	5	4	1	0	3	2	3	2
CJEI306537:0:T	yes	-	0	-	-	-	-	-	-
CJEJ192222:0:T	yes	-	-	-	-	-	-	-	0
CJEJ195099:0:T	no	-	-	-	-	-	-	-	0
CJEJ354242:2:T	yes	-	-	-	-	-	0	-	0
CJEJ360109:0:T	yes	-	-	-	-	-	-	-	0
CJEJ407148:0:T	no	-	-	-	-	-	0	-	0
CKLU431943:1:T	yes	0	-	-	-	-	-	-	-
CKOR374847:0:T	yes	-	-	-	-	3	0	3	0
CMAQ397948:0:T	yes	-	-	-	-	0	513	0	513
CMET456442:0:T	yes	-	-	-	-	-	-	0	-
CMIC31964:2:T	yes	0	419	-	-	1167	1166	1167	1166
CMIC443906:2:T	yes	692	361	-	-	0	1	0	1
CMUR243161:1:T	yes	1	0	-	-	-	-	-	-
CPEL335992:0:T	yes	0	1	-	9	6	7	6	7
CPNE115711:1:T	yes	1	0	-	-	-	-	-	-
CPNE115713:0:T	no	0	1	-	-	-	-	-	-
CPNE138677:0:T	no	0	1	-	-	-	-	-	-
CPNE182082:0:T	no	0	1	-	-	-	-	-	-
CPRO264201:0:F	yes	0	1	-	-	-	-	-	-
CPSY167879:0:T	yes	5	4	1	0	3	2	3	2
CSAL290398:0:T	yes	5	4	1	0	3	2	3	2
CSP501479:6:F	yes	20	19	-	6	0	4	0	4
CSP78:2:T	yes	1	0	-	4645	4642	4643	4642	4643
CSUL444179:0:T	yes	1	0	-	-	-	-	-	-
CTEP194439:0:T	yes	-	-	-	-	-	1	0	1
CTRA471472:0:T	yes	1	0	-	-	-	-	-	-
CTRA471473:0:T	no	1	0	-	-	-	-	-	-
CVIO243365:0:T	yes	7	6	1	0	3	2	2362	2363
DARO159087:0:T	yes	0	1	6	7	4	5	4	5
DDES207559:0:T	yes	-	-	-	-	-	-	-	0
DGEO319795:1:T	yes	0	1	-	-	746	747	746	747
DNOD246195:0:T	yes	1	0	-	-	674	673	674	673
DRAD243230:3:T	yes	0	196	-	-	855	856	855	856
DSHI398580:5:T	yes	23	22	-	6	0	4	0	4
DVUL882:1:T	yes	-	-	-	-	0	-	-	-
ECAN269484:0:T	yes	673	67	-	0	503	504	503	504
ECAR218491:0:T	yes	5	4	1	0	3	2	2646	2645
ECHA205920:0:T	yes	714	492	-	573	1	0	-	0
ECOL199310:0:T	no	6	4156	2	0	4	3	4361	4362
ECOL316407:0:T	no	5	4	1	0	3	2	3429	3430
ECOL331111:6:T	no	5	4	1	0	3	2	3807	3808
ECOL362663:0:T	no	5	3528	1	0	3	2	3650	3651
ECOL364106:1:T	no	5	3893	1	0	3	2	4016	4017
ECOL405955:2:T	yes	7	6	1	0	5	2	3663	3664
ECOL409438:6:T	yes	5	4	1	0	3	2	3758	3759
ECOL413997:0:T	no	5	4	1	0	3	2	3380	3381
ECOL439855:4:T	no	5	4	1	0	3	2	3758	3759
ECOL469008:0:T	no	0	1	4	5	2	3	938	937
ECOL481805:0:T	no	0	1	4	5	2	3	931	930
ECOL585034:0:T	no	5	4	1	0	3	2	3622	3623
ECOL585035:0:T	no	5	3651	1	0	3	2	3839	3840
ECOL585055:0:T	no	5	4	1	0	3	2	3940	3941
ECOL585056:2:T	no	5	4	1	0	3	2	3884	3885
ECOL585057:0:T	no	5	4	1	0	3	2	3949	3950
ECOL585397:0:T	no	5	4	1	0	3	2	4138	4139
ECOL83334:0:T	no	6	5	1	0	3	2	4503	4504
ECOLI:0:T	no	5	4	1	0	3	2	3508	3509
ECOO157:0:T	no	6	5	1	0	3	2	4479	4480
EFER585054:1:T	yes	0	1	4	5	2	3	1792	1793
ELIT314225:0:T	yes	244	243	-	74	0	72	0	72
ERUM254945:0:T	yes	705	85	-	0	548	549	548	549
ERUM302409:0:T	no	700	86	-	0	545	546	545	546
ESP42895:1:T	yes	899	898	895	894	897	896	0	1
FALN326424:0:T	yes	-	4679	-	-	0	1	0	1
FJOH376686:0:T	yes	0	1	-	-	-	-	-	-
FPHI484022:1:T	yes	5	4	1	0	3	2	3	2
FRANT:0:T	no	5	4	1	0	3	2	3	2
FSP106370:0:T	yes	-	3061	-	-	0	1	0	1
FSP1855:0:T	yes	788	0	-	-	-	-	-	-
FTUL351581:0:T	no	0	1	4	5	2	3	2	3
FTUL393011:0:T	no	0	1	4	5	2	3	2	3
FTUL393115:0:T	yes	5	4	1	0	3	2	3	2
FTUL401614:0:T	yes	0	1	4	5	2	3	2	3
FTUL418136:0:T	no	5	4	1	0	3	2	3	2
FTUL458234:0:T	no	0	1	4	5	2	3	2	3
GBET391165:0:T	yes	0	1	-	13	10	11	-	11
GFOR411154:0:T	yes	0	1	-	-	-	-	-	-
GKAU235909:1:T	yes	1	0	-	-	-	-	-	-
GMET269799:1:T	yes	2465	2468	-	-	-	0	1	0
GOXY290633:5:T	yes	191	0	-	-	-	-	-	-
GSUL243231:0:T	yes	0	1	-	-	-	-	-	-
GTHE420246:1:T	yes	1	0	-	-	-	-	-	-
GURA351605:0:T	yes	1	0	-	-	-	-	-	-
GVIO251221:0:T	yes	-	-	-	-	0	44	0	44
HARS204773:0:T	yes	0	1	6	7	4	5	4	5
HAUR316274:2:T	yes	0	-	-	-	1204	-	1204	-
HBUT415426:0:T	yes	-	-	-	1	3	0	3	0
HCHE349521:0:T	yes	0	1	4	5	2	3	2	3
HDUC233412:0:T	yes	1144	1145	-	-	1	0	1	0
HHAL349124:0:T	yes	1056	1057	-	3	0	1	1416	1417
HHEP235279:0:T	yes	-	-	-	-	-	-	-	0
HINF281310:0:T	yes	843	844	-	-	0	1	0	1
HINF374930:0:T	yes	1	0	-	-	721	720	721	720
HINF71421:0:T	no	809	810	-	-	0	1	0	1
HMAR272569:8:T	yes	-	-	-	-	0	2	0	-
HMUK485914:1:T	yes	-	-	-	-	0	1	0	1
HNEP81032:0:T	yes	1	0	-	2882	2886	2884	2886	2884
HSAL478009:4:T	yes	-	-	-	-	1	0	1	0
HSOM205914:1:T	yes	0	1	-	-	321	320	321	320
HSOM228400:0:T	no	652	653	-	-	0	1	0	1
HSP64091:2:T	no	-	-	-	-	1	0	1	0
HWAL362976:1:T	yes	-	-	-	-	1	0	1	0
IHOS453591:0:T	yes	-	-	-	-	-	0	172	0
ILOI283942:0:T	yes	0	1	4	5	2	3	2	3
JSP290400:1:T	yes	28	27	-	7	0	5	3200	5
JSP375286:0:T	yes	7	6	1	0	3	2	3	2
KPNE272620:2:T	yes	1223	1222	1218	1217	1221	1220	0	1
KRAD266940:2:F	yes	2502	0	-	-	1810	1811	1810	1811
LBIF355278:2:T	yes	2	0	-	-	-	-	-	-
LBIF456481:2:T	no	2	0	-	-	-	-	-	-
LBOR355276:1:T	yes	2	0	-	-	-	-	-	-
LBOR355277:1:T	no	2	0	-	-	-	-	-	-
LCAS321967:1:T	yes	0	-	-	-	-	-	-	-
LCHO395495:0:T	yes	182	183	2	3	0	1	0	1
LINT189518:1:T	yes	0	2	-	-	-	-	-	-
LINT267671:1:T	no	2	0	-	-	-	-	-	-
LPNE272624:0:T	no	5	4	1	0	3	2	3	2
LPNE297245:1:F	no	5	4	1	0	3	2	3	2
LPNE297246:1:F	yes	5	4	1	0	3	2	3	2
LPNE400673:0:T	no	0	1	4	5	2	3	2	3
LSPH444177:1:T	yes	1	0	-	-	-	-	-	-
LXYL281090:0:T	yes	451	1226	-	-	0	1	0	1
MABS561007:1:T	yes	561	0	-	-	2297	2296	2297	2296
MAER449447:0:T	yes	-	-	-	-	0	4300	0	4300
MAQU351348:2:T	yes	5	4	1	0	3	2	3	2
MAVI243243:0:T	yes	-	0	-	-	2878	2877	2878	2877
MBOV233413:0:T	no	966	0	-	-	2093	2092	304	303
MBOV410289:0:T	no	928	0	-	-	2093	2092	302	301
MCAP243233:0:T	yes	389	388	-	6	0	8	0	8
MEXT419610:0:T	yes	1	0	-	1948	1952	1950	-	1950
MGIL350054:3:T	yes	730	0	-	-	2648	2647	2648	2647
MLEP272631:0:T	yes	95	250	-	-	0	1	0	1
MLOT266835:2:T	yes	30	31	-	4	0	2	-	2
MMAG342108:0:T	yes	12	11	-	0	3	2	3	2
MMAR394221:0:T	yes	0	1	-	32	28	30	28	30
MPET420662:1:T	yes	0	1	155	156	153	154	153	154
MSED399549:0:T	yes	-	-	-	-	0	1	0	428
MSME246196:0:T	yes	2596	3348	-	-	0	1	0	1
MSP164756:1:T	no	2097	2766	-	-	0	1	0	1
MSP164757:0:T	no	2064	2738	-	-	0	1	0	1
MSP189918:2:T	yes	2129	2813	-	-	0	1	0	1
MSP266779:3:T	yes	158	157	-	3	0	1	-	1
MSP400668:0:T	yes	0	1	4	5	2	3	2	3
MSP409:2:T	yes	2	0	-	3745	3749	3747	-	3747
MSUC221988:0:T	yes	0	1	-	-	310	309	310	309
MTBCDC:0:T	no	1021	0	-	-	2242	2241	332	331
MTBRV:0:T	no	972	0	-	-	2092	2091	308	307
MTUB336982:0:T	no	957	0	-	-	2058	2057	311	310
MTUB419947:0:T	yes	1005	0	-	-	2174	2173	319	318
MVAN350058:0:T	yes	1975	2868	-	-	0	1	0	1
MXAN246197:0:T	yes	1	0	-	-	-	-	-	-
NARO279238:0:T	yes	0	1	-	570	1162	572	1162	572
NEUR228410:0:T	yes	1351	1350	1	0	1347	2	1347	2
NEUT335283:2:T	yes	0	1	1597	1596	4	1598	4	1598
NFAR247156:2:T	yes	760	3792	-	-	0	1	0	1
NGON242231:0:T	yes	0	1	6	7	4	5	4	5
NHAM323097:2:T	yes	0	1	-	2960	2963	2962	2963	2962
NMEN122586:0:T	no	8	7	1	0	3	2	3	2
NMEN122587:0:T	yes	7	6	1	0	3	2	3	2
NMEN272831:0:T	no	7	6	1	0	3	2	3	2
NMEN374833:0:T	no	7	6	1	0	3	2	3	2
NMUL323848:3:T	yes	0	1	6	7	4	5	4	5
NOCE323261:1:T	yes	1	0	2319	2320	2317	2318	2317	2318
NPHA348780:2:T	yes	-	-	-	-	1	0	1	0
NSEN222891:0:T	yes	483	511	-	0	469	317	469	317
NSP103690:6:T	yes	-	-	-	-	0	2045	0	2045
NSP35761:1:T	yes	567	0	-	-	-	-	-	-
NSP387092:0:T	yes	-	-	-	-	0	1	0	1
NWIN323098:0:T	yes	1	0	-	2402	2405	2404	2405	2404
OANT439375:5:T	yes	1	0	-	18	21	20	21	20
OCAR504832:0:T	yes	296	295	-	0	3	2	-	2
OIHE221109:0:T	yes	1	0	-	-	-	-	-	-
OTSU357244:0:F	yes	1	0	-	-	123	122	123	122
PACN267747:0:T	yes	0	568	-	-	-	-	-	-
PAER178306:0:T	yes	-	-	-	-	1	0	1	0
PAER208963:0:T	yes	0	1	4	5	2	3	2	3
PAER208964:0:T	no	5	4	1	0	3	2	3	2
PARC259536:0:T	yes	5	4	1	0	3	2	3	2
PARS340102:0:T	yes	-	-	-	-	1	0	1	0
PATL342610:0:T	yes	5	4	1	0	3	2	3	2
PCAR338963:0:T	yes	1	0	-	-	-	-	-	-
PCRY335284:1:T	yes	5	4	1	0	3	2	3	2
PENT384676:0:T	yes	0	1	4	5	2	3	2	3
PFLU205922:0:T	yes	5	4	1	0	3	2	3	2
PFLU216595:1:T	yes	5	4	1	0	3	2	3	2
PFLU220664:0:T	yes	5	4	1	0	3	2	3	2
PHAL326442:1:T	yes	0	1	4	5	2	3	2	3
PING357804:0:T	yes	0	1	4	5	2	3	974	973
PISL384616:0:T	yes	-	-	-	-	0	1	0	1
PLUM243265:0:F	yes	5	4	1	0	3	2	2721	2720
PLUT319225:0:T	yes	-	-	-	-	-	1	0	1
PMEN399739:0:T	yes	0	1	4	5	2	3	2	3
PMUL272843:1:T	yes	78	77	-	-	0	1	0	1
PNAP365044:8:T	yes	1	0	1183	1182	1185	1184	1185	1184
PPRO298386:2:T	yes	5	4	1	0	3	2	2325	2324
PPUT160488:0:T	no	0	1	4	5	2	3	2	3
PPUT351746:0:T	yes	5	4	1	0	3	2	3	2
PPUT76869:0:T	no	0	1	4	5	2	3	2	3
PSP117:0:T	yes	70	0	-	-	-	-	-	-
PSP296591:2:T	yes	0	1	976	975	978	977	978	977
PSP312153:0:T	yes	85	84	1	0	3	2	3	2
PSP56811:2:T	yes	6	5	1	0	3	2	3	2
PSTU379731:0:T	yes	5	4	1	0	3	2	3	2
PSYR205918:0:T	yes	5	4	1	0	3	2	3	2
PSYR223283:2:T	yes	5	4	1	0	3	2	3	2
PTHE370438:0:T	yes	-	-	-	-	-	0	-	0
PTOR263820:0:T	yes	-	-	-	-	-	0	1	0
RAKA293614:0:F	yes	172	173	-	109	0	114	0	114
RBEL336407:0:T	yes	0	1	-	72	299	68	299	68
RBEL391896:0:F	no	75	74	-	0	1194	4	1194	4
RCAN293613:0:F	yes	144	143	85	83	0	86	0	86
RCAS383372:0:T	yes	0	1	-	-	-	-	-	-
RCON272944:0:T	no	161	162	-	101	0	103	0	103
RDEN375451:4:T	yes	0	1	-	18	22	20	-	20
RETL347834:5:T	yes	0	1	-	10	7	8	7	8
REUT264198:3:T	yes	0	1	293	294	291	292	291	292
REUT381666:2:T	yes	0	1	293	294	291	292	291	292
RFEL315456:2:T	yes	980	979	-	1052	0	1048	0	1048
RFER338969:1:T	yes	522	523	2	3	0	1	0	1
RLEG216596:6:T	yes	0	2	-	13	10	11	10	11
RMAS416276:1:T	yes	140	141	-	86	0	88	0	88
RMET266264:2:T	yes	0	1	434	435	432	433	432	433
RPAL258594:0:T	yes	0	1	-	31	28	29	28	29
RPAL316055:0:T	yes	0	1	-	214	218	216	218	216
RPAL316056:0:T	yes	120	121	-	4	0	2	0	2
RPAL316057:0:T	yes	67	66	-	3	0	1	0	1
RPAL316058:0:T	yes	0	1	-	53	50	51	50	51
RPOM246200:1:T	yes	0	1	-	15	18	17	18	17
RPRO272947:0:T	yes	135	136	-	82	0	84	0	84
RRIC392021:0:F	no	166	168	-	101	0	104	0	104
RRIC452659:0:T	yes	180	182	-	111	0	113	0	113
RRUB269796:1:T	yes	12	11	-	0	3	2	3	2
RSAL288705:0:T	yes	-	1085	-	-	0	1	0	1
RSOL267608:0:T	yes	-	0	-	-	-	-	-	-
RSOL267608:1:T	yes	0	-	743	744	741	742	741	742
RSP101510:3:F	yes	0	4848	-	-	5081	5082	5081	5082
RSP357808:0:T	yes	1	0	-	-	-	-	-	-
RSPH272943:3:T	yes	-	-	-	-	-	-	0	-
RSPH272943:4:T	yes	0	1	-	10	15	12	-	12
RSPH349101:1:T	no	-	-	-	-	-	-	0	-
RSPH349101:2:T	no	0	1	-	10	15	12	-	12
RSPH349102:5:T	yes	0	1	-	10	15	12	-	12
RTYP257363:0:T	no	84	85	30	29	0	31	0	31
RXYL266117:0:T	yes	2510	2511	-	-	-	0	-	-
SACI330779:0:T	yes	-	-	-	-	0	1	0	1
SALA317655:1:T	yes	0	1	-	809	7	811	7	811
SARE391037:0:T	yes	0	517	-	-	-	-	-	-
SAUR158878:1:T	no	0	1	-	-	-	-	-	-
SAUR158879:1:T	no	0	1	-	-	-	-	-	-
SAUR196620:0:T	no	0	1	-	-	-	-	-	-
SAUR273036:0:T	no	0	1	-	-	-	-	-	-
SAUR282458:0:T	no	0	1	-	-	-	-	-	-
SAUR282459:0:T	no	0	1	-	-	-	-	-	-
SAUR359786:1:T	no	0	1	-	-	-	-	-	-
SAUR359787:1:T	no	0	1	-	-	-	-	-	-
SAUR367830:3:T	no	0	1	-	-	-	-	-	-
SAUR418127:0:T	yes	0	1	-	-	-	-	-	-
SAUR426430:0:T	no	0	1	-	-	-	-	-	-
SAUR93061:0:F	no	0	1	-	-	-	-	-	-
SAUR93062:1:T	no	0	1	-	-	-	-	-	-
SAVE227882:1:F	yes	3108	0	-	-	429	428	429	428
SBAL399599:3:T	yes	0	1	4	5	2	3	2	3
SBAL402882:1:T	no	0	1	4	5	2	3	2	3
SBOY300268:1:T	yes	6	5	1	0	3	2	3525	3524
SCO:2:F	yes	0	3143	-	-	2715	2716	2715	2716
SDEG203122:0:T	yes	0	1	4	5	2	3	2	3
SDEN318161:0:T	yes	0	1	4	5	2	3	2	3
SDYS300267:1:T	yes	6	5	1	0	3	2	3497	3498
SENT209261:0:T	no	0	1	4	5	2	3	2160	2161
SENT220341:0:T	no	5	4	1	0	3	2	3572	3573
SENT295319:0:T	no	0	1	4	5	2	3	2071	2072
SENT321314:2:T	no	4	3	-	0	2	1	3546	3547
SENT454169:2:T	no	5	4	1	0	3	2	3751	3752
SEPI176279:1:T	yes	0	1	-	-	-	-	-	-
SEPI176280:0:T	no	0	1	-	-	-	-	-	-
SERY405948:0:T	yes	0	4614	-	-	4815	4814	4815	4814
SFLE198214:0:T	yes	0	1	5	6	3	4	3621	3622
SFLE373384:0:T	no	0	1	4	5	2	3	3513	3514
SFUM335543:0:T	yes	3342	3341	-	-	1910	1911	1910	0
SGLO343509:3:T	yes	5	4	1	0	3	2	3	2
SHAE279808:0:T	yes	1	0	-	-	-	-	-	-
SHAL458817:0:T	yes	0	1	4	5	2	3	2	3
SHIGELLA:0:T	no	0	1	5	6	3	4	3533	3534
SLAC55218:1:F	yes	17	16	-	3	0	1	0	1
SLOI323850:0:T	yes	5	4	1	0	3	2	3	2
SMED366394:3:T	yes	0	1	-	19	16	17	16	17
SMEL266834:2:T	yes	0	1	-	20	17	18	17	18
SONE211586:1:T	yes	4	3	-	0	2	1	2	1
SPEA398579:0:T	no	5	4	1	0	3	2	3	2
SPRO399741:1:T	yes	873	872	869	868	871	870	0	1
SRUB309807:1:T	yes	319	672	-	-	0	1	0	1
SSAP342451:2:T	yes	1	0	-	-	-	-	-	-
SSED425104:0:T	yes	0	1	4	5	2	3	2	3
SSOL273057:0:T	yes	-	-	-	-	1	0	1	0
SSON300269:1:T	yes	6	5	1	0	3	2	3471	3472
SSP1148:0:T	yes	-	-	-	-	254	0	254	0
SSP292414:1:T	yes	0	1	-	15	20	17	20	17
SSP321327:0:T	yes	-	-	-	-	-	0	-	0
SSP321332:0:T	yes	-	-	-	-	369	0	369	0
SSP387093:0:T	yes	-	-	-	-	1	0	1	0
SSP644076:2:F	yes	0	1	-	16	21	18	21	18
SSP94122:1:T	yes	5	4	1	0	3	2	3	2
STHE292459:0:T	yes	0	-	-	-	490	489	490	489
STOK273063:0:T	yes	-	-	-	-	1	0	1	0
STRO369723:0:T	yes	0	378	-	-	-	-	-	-
STYP99287:1:T	yes	5	4	1	0	3	2	3579	3580
TACI273075:0:T	yes	-	-	-	-	1	0	1	0
TCRU317025:0:T	yes	-	-	-	3	0	1	0	1
TDEN292415:0:T	yes	7	6	1	0	3	2	3	2
TDEN326298:0:T	yes	-	-	-	-	0	1	0	1
TELO197221:0:T	yes	-	-	-	-	384	0	384	0
TERY203124:0:T	yes	-	-	-	-	1099	0	-	0
TFUS269800:0:T	yes	432	0	-	-	-	-	-	-
TROS309801:1:T	yes	228	229	-	-	0	1	0	1
TTHE262724:1:T	yes	631	630	-	-	0	-	0	-
TTHE300852:2:T	yes	0	1	-	-	1190	1191	1190	1191
TTUR377629:0:T	yes	0	1	4	5	2	3	2	3
TVOL273116:0:T	yes	-	-	-	-	0	1	0	1
TWHI203267:0:T	yes	0	-	-	-	-	-	-	-
TWHI218496:0:T	no	0	-	-	-	-	-	-	-
UMET351160:0:T	yes	0	-	-	-	-	-	-	-
VCHO:0:T	yes	0	1	4	5	2	3	590	589
VCHO345073:1:T	no	0	1	4	5	2	3	536	535
VEIS391735:1:T	yes	0	1	371	372	369	370	369	370
VFIS312309:2:T	yes	5	4	1	0	3	2	1557	1556
VPAR223926:1:T	yes	5	4	1	0	3	2	2064	2063
VVUL196600:2:T	yes	5	4	1	0	3	2	2135	2134
VVUL216895:1:T	no	0	1	4	5	2	3	1078	1079
WPIP80849:0:T	yes	0	687	-	-	1207	827	1207	827
WPIP955:0:T	yes	93	791	-	707	260	0	260	0
WSUC273121:0:T	yes	-	-	-	-	-	0	-	0
XAUT78245:1:T	yes	2	0	-	1818	1815	1816	-	1816
XAXO190486:0:T	yes	0	1	-	541	544	543	544	543
XCAM190485:0:T	yes	0	1	-	646	643	644	643	644
XCAM314565:0:T	no	766	765	-	0	4	2	4	2
XCAM316273:0:T	no	0	1	-	635	631	633	631	633
XCAM487884:0:T	no	749	748	-	0	4	2	4	2
XFAS160492:2:T	no	484	485	-	0	3	2	3	2
XFAS183190:1:T	yes	404	405	-	0	3	2	3	2
XFAS405440:0:T	no	487	488	-	0	3	2	3	2
XORY291331:0:T	no	0	1	-	273	270	271	270	271
XORY342109:0:T	yes	0	1	-	270	267	268	267	268
XORY360094:0:T	no	1223	1221	-	0	9	5	9	5
YENT393305:1:T	yes	2480	2481	2484	2485	2482	2483	0	1
YPES187410:5:T	no	2460	2461	2464	2465	2462	2463	0	1
YPES214092:3:T	no	735	734	731	730	733	732	0	1
YPES349746:2:T	no	660	659	656	655	658	657	1	0
YPES360102:3:T	yes	5	4	1	0	3	2	3388	3387
YPES377628:2:T	no	0	1	4	5	2	3	442	441
YPES386656:2:T	no	0	1	4	5	2	3	1051	1050
YPSE273123:2:T	no	757	756	753	752	755	754	0	1
YPSE349747:2:T	no	0	1	4	5	2	3	781	780