CANDIDATE ID: 80

CANDIDATE ID: 80

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9974300e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.7500000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- RUVB (ruvB) (b1860)
   Products of gene:
     - EG10924-MONOMER (branch migration of Holliday structures; repair helicase)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- EG12854 (ybgF) (b0742)
   Products of gene:
     - EG12854-MONOMER (predicted periplasmic protein)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11110 (ybgC) (b0736)
   Products of gene:
     - EG11110-MONOMER (esterase/thioesterase)
       Reactions:
        1,4-dihydroxy-2-naphthoyl-CoA + H2O  ->  1,4-dihydroxy-2-naphthoate + coenzyme A + H+
         In pathways
         PWY-5850 (PWY-5850)
         PWY-5840 (PWY-5840)
         PWY-5845 (PWY-5845)
         PWY-5860 (PWY-5860)
         PWY-5862 (PWY-5862)
         PWY-5838 (superpathway of menaquinone-8 biosynthesis I)
         PWY-5896 (PWY-5896)
         PWY-5897 (PWY-5897)
         PWY-5898 (PWY-5898)
         PWY-5899 (PWY-5899)
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         PWY-5861 (PWY-5861)
         PWY-5863 (PWY-5863)
         PWY-5837 (1,4-dihydroxy-2-naphthoate biosynthesis I)
         PWY-5791 (PWY-5791)

- EG11011 (tolR) (b0738)
   Products of gene:
     - EG11011-MONOMER (TolR)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11010 (tolQ) (b0737)
   Products of gene:
     - EG11010-MONOMER (TolQ)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11008 (tolB) (b0740)
   Products of gene:
     - EG11008-MONOMER (TolB)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG10684 (pal) (b0741)
   Products of gene:
     - EG10684-MONOMER (Pal)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG10271 (exbB) (b3006)
   Products of gene:
     - EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
     - CPLX0-1923 (TonB energy transducing system)
     - CPLX0-1943 (Outer Membrane Ferric Citrate Transport System)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[periplasmic space]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]
     - CPLX0-1942 (Outer Membrane Ferrichrome Transport System)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[periplasmic space]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]
     - CPLX0-1941 (Outer Membrane Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[periplasmic space]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]
     - CPLX0-1924 (Vitamin B12 outer membrane transport complex)
       Reactions:
        cobinamide[extracellular space]  ->  cobinamide[periplasmic space]
        cob(I)alamin[extracellular space]  ->  cob(I)alamin[periplasmic space]
     - CPLX0-1862 (vitamin B12 transport system)
       Reactions:
        cob(I)alamin[extracellular space]  ->  cob(I)alamin[cytosol]



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 236
Effective number of orgs (counting one per cluster within 468 clusters): 168

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317588
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329538
YPES386656 ncbi Yersinia pestis Pestoides F8
YPES377628 ncbi Yersinia pestis Nepal5168
YPES360102 ncbi Yersinia pestis Antiqua8
YPES349746 ncbi Yersinia pestis Angola8
YPES214092 ncbi Yersinia pestis CO928
YPES187410 ncbi Yersinia pestis KIM 108
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A7
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110187
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103317
XFAS405440 ncbi Xylella fastidiosa M127
XFAS183190 ncbi Xylella fastidiosa Temecula17
XFAS160492 ncbi Xylella fastidiosa 9a5c7
XCAM487884 Xanthomonas campestris pv. paulliniae7
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-107
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80047
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339137
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3067
XAUT78245 ncbi Xanthobacter autotrophicus Py28
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0168
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106338
VFIS312309 ncbi Vibrio fischeri ES1148
VEIS391735 ncbi Verminephrobacter eiseniae EF01-28
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169618
TTUR377629 ncbi Teredinibacter turnerae T79018
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252598
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT28
SSP94122 ncbi Shewanella sp. ANA-38
SSP644076 Silicibacter sp. TrichCH4B7
SSP292414 ncbi Ruegeria sp. TM10407
SSON300269 ncbi Shigella sonnei Ss0468
SSED425104 ncbi Shewanella sediminis HAW-EB38
SPRO399741 ncbi Serratia proteamaculans 5688
SPEA398579 ncbi Shewanella pealeana ATCC 7003458
SONE211586 ncbi Shewanella oneidensis MR-18
SMEL266834 ncbi Sinorhizobium meliloti 10218
SMED366394 ncbi Sinorhizobium medicae WSM4198
SLOI323850 ncbi Shewanella loihica PV-48
SLAC55218 Ruegeria lacuscaerulensis7
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB48
SGLO343509 ncbi Sodalis glossinidius morsitans8
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB8
SFLE373384 ncbi Shigella flexneri 5 str. 84018
SFLE198214 ncbi Shigella flexneri 2a str. 3018
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4768
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B678
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91508
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT188
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty28
SDYS300267 ncbi Shigella dysenteriae Sd1978
SDEN318161 ncbi Shewanella denitrificans OS2178
SDEG203122 ncbi Saccharophagus degradans 2-407
SBOY300268 ncbi Shigella boydii Sb2278
SBAL402882 ncbi Shewanella baltica OS1858
SBAL399599 ncbi Shewanella baltica OS1958
SALA317655 ncbi Sphingopyxis alaskensis RB22567
SACI56780 ncbi Syntrophus aciditrophicus SB8
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170257
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170297
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.17
RSOL267608 ncbi Ralstonia solanacearum GMI10008
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111708
RPOM246200 ncbi Ruegeria pomeroyi DSS-37
RPAL316058 ncbi Rhodopseudomonas palustris HaA28
RPAL316057 ncbi Rhodopseudomonas palustris BisB58
RPAL316056 ncbi Rhodopseudomonas palustris BisB188
RPAL316055 ncbi Rhodopseudomonas palustris BisA538
RPAL258594 ncbi Rhodopseudomonas palustris CGA0098
RMET266264 ncbi Ralstonia metallidurans CH348
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38418
RFER338969 ncbi Rhodoferax ferrireducens T1188
REUT381666 ncbi Ralstonia eutropha H168
REUT264198 ncbi Ralstonia eutropha JMP1348
RETL347834 ncbi Rhizobium etli CFN 428
RDEN375451 ncbi Roseobacter denitrificans OCh 1147
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30008
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a8
PSTU379731 ncbi Pseudomonas stutzeri A15018
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-18
PSP296591 ncbi Polaromonas sp. JS6668
PPUT76869 ncbi Pseudomonas putida GB-18
PPUT351746 ncbi Pseudomonas putida F18
PPUT160488 ncbi Pseudomonas putida KT24408
PPRO298386 ncbi Photobacterium profundum SS98
PNAP365044 ncbi Polaromonas naphthalenivorans CJ28
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp8
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PING357804 ncbi Psychromonas ingrahamii 378
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU220664 ncbi Pseudomonas fluorescens Pf-58
PFLU216595 ncbi Pseudomonas fluorescens SBW258
PFLU205922 ncbi Pseudomonas fluorescens Pf0-18
PENT384676 ncbi Pseudomonas entomophila L488
PCRY335284 ncbi Psychrobacter cryohalolentis K57
PCAR338963 ncbi Pelobacter carbinolicus DSM 23808
PATL342610 ncbi Pseudoalteromonas atlantica T6c8
PARC259536 ncbi Psychrobacter arcticus 273-47
PAER208964 ncbi Pseudomonas aeruginosa PAO18
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA148
OCAR504832 ncbi Oligotropha carboxidovorans OM58
OANT439375 ncbi Ochrobactrum anthropi ATCC 491888
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2558
NOCE323261 ncbi Nitrosococcus oceani ATCC 197078
NMUL323848 ncbi Nitrosospira multiformis ATCC 251968
NHAM323097 ncbi Nitrobacter hamburgensis X148
NEUT335283 ncbi Nitrosomonas eutropha C918
NEUR228410 ncbi Nitrosomonas europaea ATCC 197188
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124447
MXAN246197 ncbi Myxococcus xanthus DK 16228
MSP409 Methylobacterium sp.8
MSP400668 ncbi Marinomonas sp. MWYL17
MSP266779 ncbi Chelativorans sp. BNC18
MPET420662 ncbi Methylibium petroleiphilum PM18
MMAR394221 ncbi Maricaulis maris MCS107
MMAG342108 ncbi Magnetospirillum magneticum AMB-18
MLOT266835 ncbi Mesorhizobium loti MAFF3030998
MFLA265072 ncbi Methylobacillus flagellatus KT8
MEXT419610 ncbi Methylobacterium extorquens PA18
MCAP243233 ncbi Methylococcus capsulatus Bath8
MAQU351348 ncbi Marinobacter aquaeolei VT88
LPNE400673 ncbi Legionella pneumophila Corby8
LPNE297246 ncbi Legionella pneumophila Paris8
LPNE297245 ncbi Legionella pneumophila Lens8
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 18
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-008
LCHO395495 ncbi Leptothrix cholodnii SP-68
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
JSP375286 ncbi Janthinobacterium sp. Marseille8
JSP290400 ncbi Jannaschia sp. CCS18
ILOI283942 ncbi Idiomarina loihiensis L2TR8
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HNEP81032 Hyphomonas neptunium7
HINF71421 ncbi Haemophilus influenzae Rd KW207
HINF374930 ncbi Haemophilus influenzae PittEE7
HINF281310 ncbi Haemophilus influenzae 86-028NP7
HHAL349124 ncbi Halorhodospira halophila SL17
HDUC233412 ncbi Haemophilus ducreyi 35000HP7
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HARS204773 ncbi Herminiimonas arsenicoxydans8
GURA351605 ncbi Geobacter uraniireducens Rf48
GSUL243231 ncbi Geobacter sulfurreducens PCA8
GOXY290633 ncbi Gluconobacter oxydans 621H7
GMET269799 ncbi Geobacter metallireducens GS-158
GBET391165 ncbi Granulibacter bethesdensis CGDNIH17
ESP42895 Enterobacter sp.8
EFER585054 ncbi Escherichia fergusonii ATCC 354698
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL585034 ncbi Escherichia coli IAI18
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL409438 ncbi Escherichia coli SE118
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough8
DSHI398580 ncbi Dinoroseobacter shibae DFL 128
DPSY177439 ncbi Desulfotalea psychrophila LSv547
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G208
DARO159087 ncbi Dechloromonas aromatica RCB8
CVIO243365 ncbi Chromobacterium violaceum ATCC 124727
CTEP194439 ncbi Chlorobium tepidum TLS7
CSP78 Caulobacter sp.8
CSP501479 Citreicella sp. SE457
CSAL290398 ncbi Chromohalobacter salexigens DSM 30438
CPSY167879 ncbi Colwellia psychrerythraea 34H8
CJAP155077 Cellvibrio japonicus7
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1118
CBUR360115 ncbi Coxiella burnetii RSA 3318
CBUR227377 ncbi Coxiella burnetii RSA 4938
CAULO ncbi Caulobacter crescentus CB158
BVIE269482 ncbi Burkholderia vietnamiensis G48
BTRI382640 ncbi Bartonella tribocorum CIP 1054767
BTHA271848 ncbi Burkholderia thailandensis E2648
BSUI470137 ncbi Brucella suis ATCC 234458
BSUI204722 ncbi Brucella suis 13308
BSP376 Bradyrhizobium sp.8
BSP36773 Burkholderia sp.8
BQUI283165 ncbi Bartonella quintana Toulouse7
BPSE320373 ncbi Burkholderia pseudomallei 6688
BPSE320372 ncbi Burkholderia pseudomallei 1710b8
BPSE272560 ncbi Burkholderia pseudomallei K962438
BPET94624 Bordetella petrii8
BPER257313 ncbi Bordetella pertussis Tohama I8
BPAR257311 ncbi Bordetella parapertussis 128228
BOVI236 Brucella ovis8
BMEL359391 ncbi Brucella melitensis biovar Abortus 23088
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M8
BMAL320389 ncbi Burkholderia mallei NCTC 102478
BMAL320388 ncbi Burkholderia mallei SAVP18
BMAL243160 ncbi Burkholderia mallei ATCC 233448
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1108
BHEN283166 ncbi Bartonella henselae Houston-17
BCEN331272 ncbi Burkholderia cenocepacia HI24248
BCEN331271 ncbi Burkholderia cenocepacia AU 10548
BCAN483179 ncbi Brucella canis ATCC 233658
BBRO257310 ncbi Bordetella bronchiseptica RB508
BBAC360095 ncbi Bartonella bacilliformis KC5837
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1007
BAMB398577 ncbi Burkholderia ambifaria MC40-68
BAMB339670 ncbi Burkholderia ambifaria AMMD8
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9418
ASP76114 ncbi Aromatoleum aromaticum EbN18
ASP62977 ncbi Acinetobacter sp. ADP18
ASP62928 ncbi Azoarcus sp. BH728
ASP232721 ncbi Acidovorax sp. JS428
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4498
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AHYD196024 Aeromonas hydrophila dhakensis8
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232708
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-17
ACRY349163 ncbi Acidiphilium cryptum JF-57
ACAU438753 ncbi Azorhizobium caulinodans ORS 5718
ABOR393595 ncbi Alcanivorax borkumensis SK28
ABAU360910 ncbi Bordetella avium 197N7
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3458
AAVE397945 ncbi Acidovorax citrulli AAC00-18


Names of the homologs of the genes in the group in each of these orgs
  RUVB   EG12854   EG11110   EG11011   EG11010   EG11008   EG10684   EG10271   
YPSE349747 YPSIP31758_2030YPSIP31758_2866YPSIP31758_2872YPSIP31758_2870YPSIP31758_2871YPSIP31758_2868YPSIP31758_2867YPSIP31758_0591
YPSE273123 YPTB2041YPTB1161YPTB1155YPTB1157YPTB1156YPTB1159YPTB1160YPTB3383
YPES386656 YPDSF_1064YPDSF_2570YPDSF_2576YPDSF_2574YPDSF_2575YPDSF_2572YPDSF_2571YPDSF_0466
YPES377628 YPN_1535YPN_2872YPN_2878YPN_2876YPN_2877YPN_2874YPN_2873YPN_0539
YPES360102 YPA_1441YPA_0604YPA_0598YPA_0600YPA_0599YPA_0602YPA_0603YPA_3110
YPES349746 YPANGOLA_A2420YPANGOLA_A1399YPANGOLA_A3047YPANGOLA_A1395YPANGOLA_A1394YPANGOLA_A1397YPANGOLA_A1398YPANGOLA_A0268
YPES214092 YPO2058YPO1126YPO1120YPO1122YPO1121YPO1124YPO1125YPO0682
YPES187410 Y2252Y3053Y3059Y3057Y3058Y3055Y3054Y3495
YENT393305 YE2392YE2930YE2936YE2934YE2935YE2932YE2931YE3646
XORY360094 XOOORF_3306XOOORF_3299XOOORF_3305XOOORF_3303XOOORF_3304XOOORF_3301XOOORF_3300
XORY342109 XOO1547XOO1554XOO1548XOO1550XOO1549XOO1552XOO1553
XORY291331 XOO1663XOO1670XOO1664XOO1666XOO1665XOO1668XOO1669
XFAS405440 XFASM12_1063XFASM12_1070XFASM12_1064XFASM12_1066XFASM12_1065XFASM12_1068XFASM12_1069
XFAS183190 PD_0889PD_0896PD_0890PD_0892PD_0891PD_0894PD_0895
XFAS160492 XF1902XF1895XF1901XF1899XF1900XF1897XF1896
XCAM487884 XCC-B100_1174XCC-B100_1181XCC-B100_1175XCC-B100_1177XCC-B100_1176XCC-B100_1179XCC-B100_1180
XCAM316273 XCAORF_3345XCAORF_3338XCAORF_3344XCAORF_3342XCAORF_3343XCAORF_3340XCAORF_3339
XCAM314565 XC_1136XC_1143XC_1137XC_1139XC_1138XC_1141XC_1142
XCAM190485 XCC3023XCC3016XCC3022XCC3020XCC3021XCC3018XCC3017
XAXO190486 XAC3147XAC3140XAC3146XAC3144XAC3145XAC3142XAC3141
XAUT78245 XAUT_3069XAUT_3081XAUT_3072XAUT_3058XAUT_3059XAUT_3056XAUT_3080XAUT_4273
VVUL216895 VV1_2172VV1_2166VV1_2168VV1_2167VV1_2170VV1_2171VV1_2167
VVUL196600 VV2284VV2273VV2279VV2277VV2278VV2275VV2274VV2278
VPAR223926 VP1052VP1062VP1056VP1058VP1057VP1060VP1061VP1057
VFIS312309 VF0952VF0964VF0957VF0959VF0958VF0962VF0963VF0958
VEIS391735 VEIS_4070VEIS_1013VEIS_2533VEIS_4795VEIS_4794VEIS_1011VEIS_1012VEIS_4794
VCHO345073 VC0395_A1436VC0395_A1427VC0395_A1431VC0395_A1432VC0395_A1429VC0395_A1428VC0395_A1432
VCHO VC1845VC1834VC1840VC1838VC1839VC1836VC1835VC1839
TTUR377629 TERTU_3434TERTU_3427TERTU_3433TERTU_3431TERTU_3432TERTU_3429TERTU_3428TERTU_3432
TDEN292415 TBD_2211TBD_2204TBD_2210TBD_2208TBD_2209TBD_2206TBD_2205TBD_2209
STYP99287 STM1894STM0750STM0744STM0746STM0745STM0748STM0749STM3159
SSP94122 SHEWANA3_1957SHEWANA3_2529SHEWANA3_2535SHEWANA3_2533SHEWANA3_2534SHEWANA3_2531SHEWANA3_2530SHEWANA3_2534
SSP644076 SCH4B_2536SCH4B_2533SCH4B_2531SCH4B_2532SCH4B_2529SCH4B_2528SCH4B_2532
SSP292414 TM1040_2371TM1040_2369TM1040_2367TM1040_2368TM1040_2365TM1040_2364TM1040_2368
SSON300269 SSO_1281SSO_0694SSO_0688SSO_0690SSO_0689SSO_0692SSO_0693SSO_3149
SSED425104 SSED_2034SSED_1859SSED_1853SSED_1855SSED_1854SSED_1857SSED_1858SSED_1854
SPRO399741 SPRO_2776SPRO_1281SPRO_1275SPRO_1277SPRO_1276SPRO_1279SPRO_1280SPRO_4211
SPEA398579 SPEA_2362SPEA_2562SPEA_2568SPEA_2566SPEA_2567SPEA_2564SPEA_2563SPEA_2567
SONE211586 SO_2429SO_2746SO_2752SO_2750SO_2751SO_2748SO_2747SO_2751
SMEL266834 SMC03965SMC02941SMC03960SMC03957SMC03958SMC04461SMC02942SMC02085
SMED366394 SMED_2637SMED_2625SMED_2632SMED_1147SMED_2630SMED_2627SMED_2626SMED_1146
SLOI323850 SHEW_2075SHEW_1529SHEW_1523SHEW_1525SHEW_1524SHEW_1527SHEW_1528SHEW_1524
SLAC55218 SL1157_0210SL1157_0208SL1157_0206SL1157_0207SL1157_0204SL1157_0203SL1157_0207
SHIGELLA YBGFYBGCTOLRTOLQTOLBPALEXBB
SHAL458817 SHAL_1922SHAL_1693SHAL_1687SHAL_1689SHAL_1688SHAL_1691SHAL_1692SHAL_1688
SGLO343509 SG1262SG0888SG0882SG0884SG0883SG0886SG0887SG0281
SFUM335543 SFUM_0993SFUM_0757SFUM_1216SFUM_0753SFUM_0752SFUM_0755SFUM_0756SFUM_0752
SFLE373384 SFV_1862SFV_0594SFV_0600SFV_0598SFV_0599SFV_0596SFV_0595SFV_3057
SFLE198214 AAN43427.1AAN42199.1AAN42205.1AAN42203.1AAN42204.1AAN42201.1AAN42200.1AAN44529.1
SENT454169 SEHA_C2108SEHA_C0877SEHA_C0871SEHA_C0873SEHA_C0872SEHA_C0875SEHA_C0876SEHA_C3407
SENT321314 SCH_1902SCH_0754SCH_0748SCH_0750SCH_0749SCH_0752SCH_0753SCH_3101
SENT295319 SPA0975SPA1993SPA1999SPA1997SPA1998SPA1995SPA1994SPA3027
SENT220341 STY2102STY0796STY0790STY0792STY0791STY0794STY0795STY3332
SENT209261 T0983T2126T2132T2130T2131T2128T2127T3079
SDYS300267 SDY_1147SDY_0690SDY_0684SDY_0686SDY_0685SDY_0688SDY_0689SDY_3067
SDEN318161 SDEN_1883SDEN_1396SDEN_1390SDEN_1392SDEN_1391SDEN_1394SDEN_1395SDEN_1391
SDEG203122 SDE_2533SDE_2527SDE_2531SDE_2532SDE_2529SDE_2528SDE_2532
SBOY300268 SBO_1177SBO_0601SBO_0595SBO_0597SBO_0596SBO_0599SBO_0600SBO_3000
SBAL402882 SHEW185_2303SHEW185_1744SHEW185_1738SHEW185_1740SHEW185_1739SHEW185_1742SHEW185_1743SHEW185_1739
SBAL399599 SBAL195_2419SBAL195_1787SBAL195_1781SBAL195_1783SBAL195_1782SBAL195_1785SBAL195_1786SBAL195_1782
SALA317655 SALA_0333SALA_0332SALA_0330SALA_0331SALA_0328SALA_0327SALA_0331
SACI56780 SYN_02971SYN_00190SYN_00892SYN_00186SYN_00185SYN_00188SYN_00189SYN_00185
RSPH349102 RSPH17025_1233RSPH17025_0558RSPH17025_0560RSPH17025_0559RSPH17025_0562RSPH17025_0563RSPH17025_2996
RSPH349101 RSPH17029_2205RSPH17029_2326RSPH17029_2324RSPH17029_2325RSPH17029_2322RSPH17029_2321RSPH17029_2579
RSPH272943 RSP_0553RSP_0673RSP_0671RSP_0672RSP_0669RSP_0668RSP_0920
RSOL267608 RSC0500RSC0737RSC0731RSC0733RSC0732RSC0735RSC0736RSC0732
RRUB269796 RRU_A1089RRU_A1096RRU_A1090RRU_A1092RRU_A1091RRU_A1094RRU_A1095RRU_A1091
RPOM246200 SPO_3115SPO_3113SPO_3111SPO_3112SPO_3109SPO_3108SPO_3112
RPAL316058 RPB_4269RPB_1816RPB_4268RPB_1810RPB_1809RPB_1812RPB_1815RPB_1241
RPAL316057 RPD_4167RPD_4143RPD_4165RPD_4149RPD_4150RPD_4147RPD_4144RPD_4004
RPAL316056 RPC_4803RPC_4747RPC_1924RPC_4753RPC_4754RPC_4751RPC_4748RPC_0936
RPAL316055 RPE_4767RPE_4701RPE_4763RPE_4709RPE_4710RPE_4707RPE_4702RPE_4579
RPAL258594 RPA1102RPA1124RPA1103RPA1118RPA1117RPA1120RPA1123RPA3478
RMET266264 RMET_0423RMET_2673RMET_2679RMET_2677RMET_2678RMET_2675RMET_2674RMET_2678
RLEG216596 RL3990RL3967RL3974RL3972RL3973RL3969RL3968RL3973
RFER338969 RFER_0820RFER_2094RFER_1529RFER_2673RFER_2672RFER_2092RFER_2093RFER_2672
REUT381666 H16_A0497PHG146H16_A2833H16_A2831H16_A2832H16_A2829H16_A2828H16_A2832
REUT264198 REUT_A0483REUT_A0797REUT_A0791REUT_A0793REUT_A0792REUT_A0795REUT_A0796REUT_A0792
RETL347834 RHE_CH03482RHE_CH03460RHE_CH03467RHE_CH03465RHE_CH03466RHE_CH03462RHE_CH03461RHE_CH03466
RDEN375451 RD1_2090RD1_2092RD1_2095RD1_2093RD1_2097RD1_2098RD1_2093
PSYR223283 PSPTO_3977PSPTO_3970PSPTO_3976PSPTO_3974PSPTO_3975PSPTO_3972PSPTO_3971PSPTO_0069
PSYR205918 PSYR_1410PSYR_1417PSYR_1411PSYR_1413PSYR_1412PSYR_1415PSYR_1416PSYR_0205
PSTU379731 PST_2808PST_2801PST_2807PST_2805PST_2806PST_2803PST_2802PST_1946
PSP312153 PNUC_1880PNUC_0273PNUC_1340PNUC_0277PNUC_0278PNUC_0275PNUC_0274PNUC_0278
PSP296591 BPRO_4093BPRO_1986BPRO_2889BPRO_2891BPRO_2890BPRO_1984BPRO_1985BPRO_2890
PPUT76869 PPUTGB1_4201PPUTGB1_4194PPUTGB1_4200PPUTGB1_4198PPUTGB1_4199PPUTGB1_4196PPUTGB1_4195PPUTGB1_5354
PPUT351746 PPUT_1246PPUT_1253PPUT_1247PPUT_1249PPUT_1248PPUT_1251PPUT_1252PPUT_5215
PPUT160488 PP_1217PP_1224PP_1218PP_1220PP_1219PP_1222PP_1223PP_5306
PPRO298386 PBPRA1117PBPRA2548PBPRA2554PBPRA2552PBPRA2553PBPRA2550PBPRA2549PBPRA2553
PNAP365044 PNAP_0512PNAP_2048PNAP_2921PNAP_2570PNAP_2922PNAP_2050PNAP_2049PNAP_2922
PMUL272843 PM0976PM0971PM0969PM0970PM0967PM0966PM0970
PMEN399739 PMEN_1272PMEN_1279PMEN_1273PMEN_1275PMEN_1274PMEN_1277PMEN_1278PMEN_4062
PLUM243265 PLU2112PLU1457PLU1451PLU1453PLU1452PLU1455PLU1456PLU3941
PING357804 PING_0719PING_0729PING_0723PING_0725PING_0724PING_0727PING_0728PING_0724
PHAL326442 PSHAA1875PSHAA1869PSHAA1873PSHAA1874PSHAA1871PSHAA1870PSHAA1874
PFLU220664 PFL_4763PFL_4756PFL_4762PFL_4760PFL_4761PFL_4758PFL_4757PFL_6067
PFLU216595 PFLU4913PFLU4906PFLU4912PFLU4910PFLU4911PFLU4908PFLU4907PFLU5999
PFLU205922 PFL_4407PFL_4400PFL_4406PFL_4404PFL_4405PFL_4402PFL_4401PFL_5555
PENT384676 PSEEN4092PSEEN4085PSEEN4091PSEEN5452PSEEN4090PSEEN4087PSEEN4086PSEEN5451
PCRY335284 PCRYO_0685PCRYO_1191PCRYO_1135PCRYO_1136PCRYO_1133PCRYO_1509PCRYO_1136
PCAR338963 PCAR_2338PCAR_0410PCAR_1492PCAR_2977PCAR_2978PCAR_2975PCAR_2974PCAR_2978
PATL342610 PATL_2944PATL_2937PATL_2943PATL_2941PATL_2942PATL_2939PATL_2938PATL_2942
PARC259536 PSYC_0710PSYC_1200PSYC_1251PSYC_1250PSYC_1253PSYC_0908PSYC_1250
PAER208964 PA0967PA0974PA0968PA0970PA0969PA0972PA0973PA0969
PAER208963 PA14_51780PA14_51690PA14_51770PA14_51740PA14_51750PA14_51720PA14_51710PA14_51750
OCAR504832 OCAR_7299OCAR_7288OCAR_7297OCAR_7292OCAR_7293OCAR_7290OCAR_7289OCAR_6722
OANT439375 OANT_1213OANT_1221OANT_1214OANT_1216OANT_1215OANT_1218OANT_1220OANT_1254
NWIN323098 NWI_2724NWI_2713NWI_2723NWI_2719NWI_2720NWI_2717NWI_2714NWI_2040
NOCE323261 NOC_0140NOC_0147NOC_0141NOC_0143NOC_0142NOC_0145NOC_0146NOC_0142
NMUL323848 NMUL_A2719NMUL_A2712NMUL_A2718NMUL_A2716NMUL_A2717NMUL_A2714NMUL_A2713NMUL_A2717
NHAM323097 NHAM_3521NHAM_3508NHAM_3520NHAM_3514NHAM_3515NHAM_3512NHAM_3509NHAM_0747
NEUT335283 NEUT_0284NEUT_0291NEUT_0285NEUT_0287NEUT_0286NEUT_0289NEUT_0290NEUT_0286
NEUR228410 NE0213NE0220NE0214NE0216NE0215NE0218NE0219NE0215
NARO279238 SARO_0423SARO_1013SARO_1015SARO_1014SARO_1017SARO_0388SARO_0390
MXAN246197 MXAN_4969MXAN_3000MXAN_4456MXAN_5754MXAN_5753MXAN_5756MXAN_4581MXAN_0275
MSP409 M446_1104M446_0281M446_1106M446_0856M446_3390M446_3387M446_0280M446_1131
MSP400668 MMWYL1_2190MMWYL1_2196MMWYL1_2192MMWYL1_2191MMWYL1_2194MMWYL1_2195MMWYL1_2191
MSP266779 MESO_3176MESO_3169MESO_3175MESO_3173MESO_3174MESO_3171MESO_3170MESO_3174
MPET420662 MPE_A0327MPE_A1348MPE_A2953MPE_A2955MPE_A2954MPE_A1346MPE_A1347MPE_A2954
MMAR394221 MMAR10_2422MMAR10_2421MMAR10_2418MMAR10_2419MMAR10_2416MMAR10_2415MMAR10_2419
MMAG342108 AMB3216AMB3208AMB3215AMB3213AMB3214AMB3211AMB3210AMB3214
MLOT266835 MLL3895MLL3886MLL3892MLL3890MLL3891MLL3888MLL3887MLL4168
MFLA265072 MFLA_2344MFLA_2337MFLA_2343MFLA_1558MFLA_2342MFLA_2339MFLA_2338MFLA_2342
MEXT419610 MEXT_4768MEXT_4842MEXT_4765MEXT_1617MEXT_4763MEXT_4760MEXT_4843MEXT_1618
MCAP243233 MCA_1223MCA_1231MCA_1224MCA_1227MCA_1226MCA_1229MCA_1230MCA_1226
MAQU351348 MAQU_1704MAQU_1697MAQU_1703MAQU_1701MAQU_1702MAQU_1699MAQU_1698MAQU_1702
LPNE400673 LPC_1000LPC_1528LPC_0999LPC_0997LPC_0998LPC_0995LPC_1529LPC_0998
LPNE297246 LPP1534LPP2025LPP1533LPP1531LPP1532LPP1529LPP2026LPP1532
LPNE297245 LPL1449LPL2020LPL1450LPL1452LPL1451LPL1454LPL2021LPL1451
LPNE272624 LPG1576LPG2042LPG1575LPG1573LPG1574LPG1571LPG2043LPG1574
LINT363253 LI1187LI0109LI0724LI0694LI0695LI0692LI0691LI0695
LCHO395495 LCHO_3954LCHO_1942LCHO_2940LCHO_0478LCHO_2941LCHO_1944LCHO_3831LCHO_2941
KPNE272620 GKPORF_B1537GKPORF_B5175GKPORF_B4735GKPORF_B5171GKPORF_B5170GKPORF_B5173GKPORF_B5174GKPORF_B2760
JSP375286 MMA_0311MMA_2469MMA_2463MMA_2465MMA_2464MMA_2467MMA_2468MMA_2464
JSP290400 JANN_0966JANN_0977JANN_0969JANN_0971JANN_0970JANN_0975JANN_0976JANN_0970
ILOI283942 IL1085IL1078IL1084IL1082IL1083IL1080IL1079IL1083
HSOM228400 HSM_0143HSM_0131HSM_0133HSM_0132HSM_0135HSM_0136HSM_0132
HSOM205914 HS_0270HS_0258HS_0260HS_0259HS_0262HS_0263HS_0259
HNEP81032 HNE_0147HNE_0150HNE_0152HNE_0151HNE_0154HNE_0155HNE_0151
HINF71421 HI_0312HI_0386HI_0384HI_0385HI_0382HI_0381HI_0385
HINF374930 CGSHIEE_01495CGSHIEE_01070CGSHIEE_01080CGSHIEE_01075CGSHIEE_01090CGSHIEE_01095CGSHIEE_01075
HINF281310 NTHI0430NTHI0506NTHI0504NTHI0505NTHI0502NTHI0501NTHI0505
HHAL349124 HHAL_2213HHAL_2219HHAL_2215HHAL_2214HHAL_2217HHAL_2218HHAL_2214
HDUC233412 HD_1757HD_1778HD_1776HD_1777HD_1773HD_1772HD_1777
HCHE349521 HCH_04922HCH_04913HCH_04920HCH_04917HCH_04919HCH_04915HCH_04914HCH_04919
HARS204773 HEAR0258HEAR2409HEAR2403HEAR2405HEAR2404HEAR2407HEAR2408HEAR2404
GURA351605 GURA_1413GURA_3692GURA_4320GURA_0205GURA_0206GURA_0203GURA_0202GURA_0206
GSUL243231 GSU_1077GSU_2552GSU_3461GSU_0027GSU_0028GSU_0025GSU_2305GSU_0028
GOXY290633 GOX1682GOX1683GOX1685GOX1684GOX1687GOX1688GOX0532
GMET269799 GMET_0746GMET_3542GMET_3556GMET_3538GMET_3537GMET_3540GMET_3499GMET_3537
GBET391165 GBCGDNIH1_1101GBCGDNIH1_1102GBCGDNIH1_1104GBCGDNIH1_1103GBCGDNIH1_1106GBCGDNIH1_1107GBCGDNIH1_0039
ESP42895 ENT638_2429ENT638_1240ENT638_1234ENT638_1236ENT638_1235ENT638_1238ENT638_1239ENT638_3417
EFER585054 EFER_1212EFER_2362EFER_2368EFER_2366EFER_2367EFER_2364EFER_2363EFER_2947
ECOO157 YBGFYBGCTOLRTOLQTOLBPALEXBB
ECOL83334 ECS2570ECS0777ECS0771ECS0773ECS0772ECS0775ECS0776ECS3890
ECOL585397 ECED1_2065ECED1_0709ECED1_0703ECED1_0705ECED1_0704ECED1_0707ECED1_0708ECED1_3656
ECOL585057 ECIAI39_1189ECIAI39_0717ECIAI39_0711ECIAI39_0713ECIAI39_0712ECIAI39_0715ECIAI39_0716ECIAI39_3501
ECOL585056 ECUMN_2158ECUMN_0830ECUMN_0824ECUMN_0826ECUMN_0825ECUMN_0828ECUMN_0829ECUMN_3491
ECOL585055 EC55989_2039EC55989_0727EC55989_0721EC55989_0723EC55989_0722EC55989_0725EC55989_0726EC55989_3423
ECOL585035 ECS88_1917ECS88_0765ECS88_0759ECS88_0761ECS88_0760ECS88_0763ECS88_0764ECS88_3387
ECOL585034 ECIAI1_1947ECIAI1_0717ECIAI1_0711ECIAI1_0713ECIAI1_0712ECIAI1_0715ECIAI1_0716ECIAI1_3154
ECOL481805 ECOLC_1772ECOLC_2913ECOLC_2919ECOLC_2917ECOLC_2918ECOLC_2915ECOLC_2914ECOLC_0689
ECOL469008 ECBD_1778ECBD_2918ECBD_2924ECBD_2922ECBD_2923ECBD_2920ECBD_2919ECBD_0733
ECOL439855 ECSMS35_1326ECSMS35_0765ECSMS35_0759ECSMS35_0761ECSMS35_0760ECSMS35_0763ECSMS35_0764ECSMS35_3291
ECOL413997 ECB_01831ECB_00702ECB_00696ECB_00698ECB_00697ECB_00700ECB_00701ECB_02880
ECOL409438 ECSE_2036ECSE_0802ECSE_0796ECSE_0798ECSE_0797ECSE_0800ECSE_0801ECSE_3290
ECOL405955 APECO1_910APECO1_1339APECO1_1345APECO1_1343APECO1_1344APECO1_1341APECO1_1340APECO1_3418
ECOL364106 UTI89_C2064UTI89_C0739UTI89_C0732UTI89_C0734UTI89_C0733UTI89_C0736UTI89_C0738UTI89_C3426
ECOL362663 ECP_1804ECP_0753ECP_0747ECP_0749ECP_0748ECP_0751ECP_0752ECP_3090
ECOL331111 ECE24377A_2090ECE24377A_0771ECE24377A_0765ECE24377A_0767ECE24377A_0766ECE24377A_0769ECE24377A_0770ECE24377A_3475
ECOL316407 ECK1861:JW1849:B1860ECK0731:JW0732:B0742ECK0725:JW0726:B0736ECK0727:JW0728:B0738ECK0726:JW0727:B0737ECK0729:JW5100:B0740ECK0730:JW0731:B0741ECK2999:JW2974:B3006
ECOL199310 C2274C0822C0815C0817C0816C0819C0821C3741
ECAR218491 ECA2491ECA1375ECA1369ECA1371ECA1370ECA1373ECA1374ECA0358
DVUL882 DVU_2255DVU_2070DVU_0886DVU_2389DVU_3099DVU_3103DVU_3104DVU_3099
DSHI398580 DSHI_1105DSHI_1113DSHI_1107DSHI_1109DSHI_1108DSHI_1111DSHI_1112DSHI_1108
DPSY177439 DP2413DP1730DP2410DP2409DP2412DP2864DP2409
DDES207559 DDE_2322DDE_1580DDE_2735DDE_3630DDE_3629DDE_3632DDE_3633DDE_3629
DARO159087 DARO_4060DARO_4051DARO_4057DARO_4055DARO_4056DARO_4053DARO_4052DARO_4056
CVIO243365 CV_4215CV_0111CV_0107CV_0551CV_0109CV_0110CV_0551
CTEP194439 CT_0640CT_1264CT_0634CT_0633CT_0636CT_0638CT_0633
CSP78 CAUL_0786CAUL_4425CAUL_0787CAUL_0198CAUL_4430CAUL_4427CAUL_4426CAUL_3581
CSP501479 CSE45_0158CSE45_3738CSE45_3740CSE45_3739CSE45_3742CSE45_3743CSE45_3739
CSAL290398 CSAL_1848CSAL_1855CSAL_1849CSAL_1851CSAL_1850CSAL_1853CSAL_1854CSAL_1850
CPSY167879 CPS_2117CPS_1733CPS_1727CPS_1729CPS_1728CPS_1731CPS_1732CPS_1728
CJAP155077 CJA_1031CJA_1037CJA_1033CJA_1032CJA_1035CJA_1036CJA_1032
CBUR434922 COXBU7E912_0418COXBU7E912_2017COXBU7E912_0478COXBU7E912_0412COXBU7E912_0413COXBU7E912_2019COXBU7E912_2018COXBU7E912_0413
CBUR360115 COXBURSA331_A1756COXBURSA331_A0177COXBURSA331_A1689COXBURSA331_A1762COXBURSA331_A1761COXBURSA331_A0175COXBURSA331_A0176COXBURSA331_A1761
CBUR227377 CBU_1570CBU_0092CBU_1506CBU_1575CBU_1574CBU_0090CBU_0091CBU_1574
CAULO CC3236CC3228CC3234CC0322CC3233CC3230CC3229CC2336
BVIE269482 BCEP1808_0653BCEP1808_0730BCEP1808_0736BCEP1808_0734BCEP1808_0735BCEP1808_0732BCEP1808_0731BCEP1808_0735
BTRI382640 BT_2375BT_2374BT_2371BT_2372BT_2368BT_2361BT_2326
BTHA271848 BTH_I1247BTH_I1371BTH_I1377BTH_I1375BTH_I1376BTH_I1373BTH_I1372BTH_I1376
BSUI470137 BSUIS_B1178BSUIS_B1169BSUIS_B1177BSUIS_B1174BSUIS_B1175BSUIS_B1172BSUIS_B1170BSUIS_B1144
BSUI204722 BR_1702BR_1693BR_1701BR_1699BR_1700BR_1697BR_1695BR_1666
BSP376 BRADO1147BRADO1178BRADO1149BRADO1171BRADO1170BRADO1173BRADO1176BRADO1916
BSP36773 BCEP18194_A3774BCEP18194_A3887BCEP18194_A3893BCEP18194_A3891BCEP18194_A3892BCEP18194_A3889BCEP18194_C6571BCEP18194_A3892
BQUI283165 BQ11870BQ11860BQ11840BQ11850BQ11820BQ11770BQ11710
BPSE320373 BURPS668_3366BURPS668_3205BURPS668_3199BURPS668_3201BURPS668_3200BURPS668_3203BURPS668_3204BURPS668_3200
BPSE320372 BURPS1710B_A3683BURPS1710B_A3527BURPS1710B_A3521BURPS1710B_A3523BURPS1710B_A3522BURPS1710B_A3525BURPS1710B_A3526BURPS1710B_A3522
BPSE272560 BPSL2899BPSL2766BPSL2760BPSL2762BPSL2761BPSL2764BPSL2765BPSL2761
BPET94624 BPET0901BPET0656BPET0662BPET0660BPET0661BPET0658BPET0657BPET0661
BPER257313 BP3421BP3341BP3347BP3345BP3346BP3343BP3342BP3346
BPAR257311 BPP3571BPP3794BPP3788BPP3790BPP3789BPP3792BPP3793BPP3789
BOVI236 GBOORF1710GBOORF1701GBOORF1709GBOORF1706GBOORF1707GBOORF1704GBOORF1703GBOORF1676
BMEL359391 BAB1_1714BAB1_1705BAB1_1713BAB1_1711BAB1_1712BAB1_1709BAB1_1707BAB1_1679
BMEL224914 BMEI0334BMEI0341BMEI0335BMEI0337BMEI0336BMEI0339BMEI0340BMEI0365
BMAL320389 BMA10247_2532BMA10247_1951BMA10247_1945BMA10247_1947BMA10247_1946BMA10247_1949BMA10247_1950BMA10247_1946
BMAL320388 BMASAVP1_A0266BMASAVP1_A0825BMASAVP1_A0831BMASAVP1_A0829BMASAVP1_A0830BMASAVP1_A0827BMASAVP1_A0826BMASAVP1_A0830
BMAL243160 BMA_2353BMA_2083BMA_2077BMA_2079BMA_2078BMA_2081BMA_2082BMA_2078
BJAP224911 BLR1537BLL7148BLL7212BLL7154BLL7155BLL7152BLL7149BLL7073
BHEN283166 BH14890BH14880BH14860BH14870BH14840BH14790BH14710
BCEN331272 BCEN2424_0688BCEN2424_0798BCEN2424_0804BCEN2424_0802BCEN2424_0803BCEN2424_0800BCEN2424_4417BCEN2424_0803
BCEN331271 BCEN_0205BCEN_0315BCEN_0321BCEN_0319BCEN_0320BCEN_0317BCEN_3949BCEN_0320
BCAN483179 BCAN_A1741BCAN_A1733BCAN_A1740BCAN_A1738BCAN_A1739BCAN_A1736BCAN_A1734BCAN_A1707
BBRO257310 BB4006BB4239BB4233BB4235BB4234BB4237BB4238BB4234
BBAC360095 BARBAKC583_0149BARBAKC583_0148BARBAKC583_0146BARBAKC583_0147BARBAKC583_0144BARBAKC583_0165BARBAKC583_0173
BBAC264462 BD2474BD1918BD0181BD0182BD0179BD0633BD0182
BAMB398577 BAMMC406_0607BAMMC406_0692BAMMC406_0698BAMMC406_0696BAMMC406_0697BAMMC406_0694BAMMC406_4309BAMMC406_0697
BAMB339670 BAMB_0581BAMB_0675BAMB_0681BAMB_0679BAMB_0680BAMB_0677BAMB_3849BAMB_0680
BABO262698 BRUAB1_1687BRUAB1_1678BRUAB1_1686BRUAB1_1684BRUAB1_1685BRUAB1_1682BRUAB1_1680BRUAB1_1653
ASP76114 EBA3958EBA2654EBB84EBA2645EBA2644EBA2650EBA2652EBA2644
ASP62977 ACIAD2615ACIAD1383ACIAD2618ACIAD2620ACIAD2619ACIAD2622ACIAD2623ACIAD2619
ASP62928 AZO0601AZO0415AZO0421AZO0419AZO0420AZO0417AZO0416AZO0420
ASP232721 AJS_3694AJS_1725AJS_2770AJS_2772AJS_2771AJS_1723AJS_1724AJS_2771
ASAL382245 ASA_0736ASA_0747ASA_0741ASA_0743ASA_0742ASA_0745ASA_0746ASA_0742
APLE434271 APJL_0295APJL_0312APJL_0314APJL_0313APJL_0316APJL_0317APJL_0313
APLE416269 APL_0284APL_0299APL_0301APL_0300APL_0303APL_0304APL_0300
AHYD196024 AHA_3647AHA_3636AHA_3642AHA_3640AHA_3641AHA_3638AHA_3637AHA_3641
AFER243159 AFE_2962AFE_2954AFE_2961AFE_2959AFE_2960AFE_2957AFE_2953AFE_2960
AEHR187272 MLG_2777MLG_0240MLG_0244MLG_0245MLG_0242MLG_0241MLG_0245
ACRY349163 ACRY_2904ACRY_2903ACRY_2901ACRY_2902ACRY_2899ACRY_0363ACRY_2902
ACAU438753 AZC_0519AZC_0526AZC_0520AZC_0522AZC_0521AZC_0524AZC_0525AZC_1258
ABOR393595 ABO_0753ABO_0760ABO_0754ABO_0756ABO_0755ABO_0758ABO_0759ABO_0755
ABAU360910 BAV2780BAV2911BAV2913BAV2912BAV2915BAV2916BAV2912
ABAC204669 ACID345_4544ACID345_0590ACID345_1409ACID345_4001ACID345_0595ACID345_0592ACID345_0591ACID345_0595
AAVE397945 AAVE_4237AAVE_3404AAVE_2228AAVE_2226AAVE_2227AAVE_3406AAVE_3405AAVE_2227


Organism features enriched in list (features available for 221 out of the 236 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00006451992
Disease:Brucellosis 0.007608555
Disease:Bubonic_plague 0.002843366
Disease:Dysentery 0.002843366
Disease:Gastroenteritis 0.00387181013
Disease:None 0.00813051458
Endospores:No 8.429e-1341211
Endospores:Yes 8.467e-11153
GC_Content_Range4:0-40 2.213e-3317213
GC_Content_Range4:40-60 6.912e-8115224
GC_Content_Range4:60-100 2.089e-1189145
GC_Content_Range7:30-40 2.229e-2017166
GC_Content_Range7:50-60 6.434e-1272107
GC_Content_Range7:60-70 1.491e-1489134
Genome_Size_Range5:0-2 5.112e-278155
Genome_Size_Range5:2-4 0.000742058197
Genome_Size_Range5:4-6 4.569e-24125184
Genome_Size_Range5:6-10 0.00011163047
Genome_Size_Range9:1-2 5.524e-208128
Genome_Size_Range9:2-3 1.557e-624120
Genome_Size_Range9:4-5 2.932e-106496
Genome_Size_Range9:5-6 6.855e-116188
Genome_Size_Range9:6-8 0.00001512738
Gram_Stain:Gram_Neg 1.878e-47205333
Habitat:Multiple 0.000115787178
Habitat:Specialized 0.0003570953
Motility:No 7.441e-1717151
Motility:Yes 1.186e-13144267
Optimal_temp.:25-30 2.035e-71819
Oxygen_Req:Anaerobic 1.380e-1012102
Oxygen_Req:Facultative 3.212e-7104201
Pathogenic_in:Plant 0.00431591115
Shape:Coccobacillus 0.00037431011
Shape:Coccus 1.481e-11682
Shape:Rod 6.870e-22185347
Shape:Sphere 0.0068110219
Shape:Spiral 0.0000878334
Temp._range:Mesophilic 0.0008922193473
Temp._range:Psychrophilic 0.000145899
Temp._range:Thermophilic 7.930e-6235



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 247
Effective number of orgs (counting one per cluster within 468 clusters): 196

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TSP28240 Thermotoga sp.0
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis1
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SARE391037 ncbi Salinispora arenicola CNS-2051
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSP117 Pirellula sp.1
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293281
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CNOV386415 ncbi Clostridium novyi NT1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6301
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
BTUR314724 ncbi Borrelia turicatae 91E1350
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  RUVB   EG12854   EG11110   EG11011   EG11010   EG11008   EG10684   EG10271   
WPIP955 WD_0038
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0908
TTHE262724 TT_C0552
TSP28240
TPET390874
TPEN368408
TPAL243276 TP_0156
TMAR243274
TLET416591
TKOD69014
TFUS269800 TFU_2093
TDEN243275
TACI273075
SWOL335541 SWOL_1431
STOK273063
STHE322159 STER_1909
STHE299768 STR1936
STHE264199 STU1936
SSUI391296 SSU98_0049
SSUI391295 SSU05_0050
SSP84588
SSP64471
SSP321332
SSP321327
SSP1148 SLR0204
SSP1131 SYNCC9605_0474
SSOL273057 SSO2295
SSAP342451 SSP1118
SPYO370554 MGAS10750_SPY0037
SPYO370553 MGAS2096_SPY0037
SPYO370552 MGAS10270_SPY0037
SPYO370551 MGAS9429_SPY0036
SPYO319701 M28_SPY0035
SPYO293653 M5005_SPY0035
SPYO286636 M6_SPY0084
SPYO198466 SPYM3_0032
SPYO193567 SPS0033
SPYO186103 SPYM18_0039
SPYO160490 SPY0038
SPNE488221 SP70585_0319
SPNE487214 SPH_0376
SPNE487213 SPT_0306
SPNE171101 SPR0238
SPNE170187 SPN08136
SPNE1313 SPJ_0269
SMUT210007 SMU_64
SMAR399550
SGOR29390 SGO_0108
SCO SCO1518
SAVE227882 SAV6835
SAUR93062 SACOL1696
SAUR93061 SAOUHSC_01750
SAUR426430 NWMN_1543
SAUR418127 SAHV_1628
SAUR367830 SAUSA300_1597
SAUR359787 SAURJH1_1731
SAUR359786 SAURJH9_1698
SAUR282459 SAS1577
SAUR282458 SAR1721
SAUR273036 SAB1510C
SAUR196620 MW1591
SAUR158879 SA1467
SAUR158878 SAV1641
SARE391037 SARE_1800
SAGA211110 GBS0049
SAGA208435 SAG_0049
SAGA205921 SAK_0082
SACI330779
RSP101510
RSAL288705
RALB246199 GRAORF_0632
PTOR263820
PTHE370438 PTH_1027
PSP117 RB11967
PPEN278197 PEPE_1271
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PISL384616
PHOR70601
PFUR186497
PDIS435591 BDI_2988
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
NSP35761
NSEN222891
NPHA348780
NFAR247156
MVAN350058 MVAN_2575
MTUB419947 MRA_2621
MTUB336982 TBFG_12612
MTHE349307 MTHE_0834
MTHE264732 MOTH_1700
MTHE187420
MTBRV RV2592C
MTBCDC MT2669
MSYN262723
MSTA339860
MSP189918 MKMS_2314
MSP164757 MJLS_2306
MSP164756 MMCS_2267
MSME246196 MSMEG_2945
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM3087
MMAR444158
MMAR426368
MMAR402880
MMAR368407 MEMAR_0776
MMAR267377
MLEP272631 ML0483
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_3824
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_0392
MBOV410289 BCG_2615C
MBOV233413 MB2623C
MBAR269797 MBAR_A1627
MAVI243243 MAV_3473
MART243272
MAER449447 MAE_52930
MAEO419665
MACE188937 MA1540
LXYL281090
LWEL386043 LWE1545
LSPH444177
LSAK314315 LSA0367
LREU557436 LREU_0528
LPLA220668
LMON265669 LMOF2365_1551
LMON169963 LMO1532
LMES203120
LLAC272623 L0267
LLAC272622 LACR_2515
LJOH257314 LJ_0468
LINT267671
LINT189518
LINN272626 LIN1567
LHEL405566
LGAS324831 LGAS_0415
LDEL390333 LDB1613
LDEL321956 LBUL_1492
LCAS321967 LSEI_0769
LBRE387344 LVIS_1230
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621 LBA0411
KRAD266940
IHOS453591
HWAL362976 HQ2276A
HSP64091
HSAL478009
HMUK485914 HMUK_0148
HMOD498761 HM1_1829
HMAR272569 RRNAC2119
HBUT415426
FSP1855 FRANEAN1_5592
FSP106370 FRANCCI3_0948
FNOD381764
FMAG334413 FMG_0815
FALN326424 FRAAL1583
ERUM302409 ERGA_CDS_05800
ERUM254945 ERWE_CDS_05890
EFAE226185 EF_0067
ECHA205920 ECH_0462
ECAN269484 ECAJ_0563
DSP255470 CBDBA588
DSP216389 DEHABAV1_0580
DRAD243230 DR_0902
DGEO319795 DGEO_1696
DETH243164 DET_0606
CTET212717 CTC_02211
CSUL444179
CPER289380 CPR_1914
CPER195103 CPF_2203
CPER195102 CPE1947
CNOV386415 NT01CX_1833
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_3144
CJEI306537 JK1054
CHYD246194 CHY_1522
CGLU196627 CG1869
CEFF196164
CDIP257309
CDIF272563 CD2805
CDES477974 DAUD_1362
CBOT508765 CLL_A1023
CBEI290402 CBEI_1531
BTUR314724
BSP107806
BLON206672
BHER314723
BHAL272558 BH2288
BGAR290434
BCLA66692 ABC1555
BBUR224326
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667
APER272557
AORE350688 CLOS_1725
ANAE240017
ALAI441768 ACL_1111
AFUL224325
ACEL351607 ACEL_1343
ABUT367737 ABU_0529
AAUR290340


Organism features enriched in list (features available for 229 out of the 247 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00115024992
Arrangment:Clusters 0.00150761317
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0042208911
Disease:Wide_range_of_infections 0.00002961111
Endospores:No 1.208e-25142211
GC_Content_Range4:0-40 1.037e-11122213
GC_Content_Range4:40-60 9.834e-664224
GC_Content_Range4:60-100 0.001763843145
GC_Content_Range7:0-30 2.951e-73547
GC_Content_Range7:30-40 0.000019387166
GC_Content_Range7:50-60 9.425e-623107
GC_Content_Range7:60-70 0.000122435134
Genome_Size_Range5:0-2 1.531e-1196155
Genome_Size_Range5:2-4 0.000156097197
Genome_Size_Range5:4-6 3.414e-1728184
Genome_Size_Range5:6-10 0.0004275847
Genome_Size_Range9:0-1 4.967e-62227
Genome_Size_Range9:1-2 7.802e-774128
Genome_Size_Range9:2-3 1.094e-670120
Genome_Size_Range9:4-5 1.760e-61896
Genome_Size_Range9:5-6 4.254e-101088
Genome_Size_Range9:6-8 0.0002340538
Gram_Stain:Gram_Neg 1.217e-5244333
Gram_Stain:Gram_Pos 1.424e-27115150
Habitat:Multiple 0.009723459178
Habitat:Specialized 0.00059543253
Habitat:Terrestrial 0.0031089531
Motility:No 1.833e-16102151
Motility:Yes 1.163e-970267
Optimal_temp.:- 0.000611983257
Optimal_temp.:30-37 0.00012081518
Oxygen_Req:Aerobic 0.000053452185
Oxygen_Req:Anaerobic 2.110e-661102
Oxygen_Req:Microaerophilic 0.0074165218
Pathogenic_in:Animal 0.00127281566
Pathogenic_in:No 0.0049576102226
Pathogenic_in:Swine 0.009103655
Salinity:Non-halophilic 0.000070359106
Shape:Coccus 1.162e-146482
Shape:Irregular_coccus 8.685e-81717
Shape:Rod 5.955e-2577347
Shape:Sphere 0.00005431619
Temp._range:Hyperthermophilic 1.684e-72123
Temp._range:Mesophilic 0.0010685172473
Temp._range:Thermophilic 0.00072662335



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 15
Effective number of orgs (counting one per cluster within 468 clusters): 11

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-00 0.00009386908
CBUR360115 ncbi Coxiella burnetii RSA 331 0.00180439978
CBUR227377 ncbi Coxiella burnetii RSA 493 0.002018010118
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-111 0.002797810538
RAKA293614 ncbi Rickettsia akari Hartford 0.00466954166
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith 0.00466954166
RRIC452659 ncbi Rickettsia rickettsii Iowa 0.00522424246
BQUI283165 ncbi Bartonella quintana Toulouse 0.00568177177
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00573667187
RCON272944 ncbi Rickettsia conorii Malish 7 0.00575314316
RMAS416276 ncbi Rickettsia massiliae MTU5 0.00658454416
NWIN323098 ncbi Nitrobacter winogradskyi Nb-255 0.006883211788
SACI56780 ncbi Syntrophus aciditrophicus SB 0.006977511808
RBEL391896 ncbi Rickettsia bellii OSU 85-389 0.00876614636
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 0.009359812248


Names of the homologs of the genes in the group in each of these orgs
  RUVB   EG12854   EG11110   EG11011   EG11010   EG11008   EG10684   EG10271   
LINT363253 LI1187LI0109LI0724LI0694LI0695LI0692LI0691LI0695
CBUR360115 COXBURSA331_A1756COXBURSA331_A0177COXBURSA331_A1689COXBURSA331_A1762COXBURSA331_A1761COXBURSA331_A0175COXBURSA331_A0176COXBURSA331_A1761
CBUR227377 CBU_1570CBU_0092CBU_1506CBU_1575CBU_1574CBU_0090CBU_0091CBU_1574
CBUR434922 COXBU7E912_0418COXBU7E912_2017COXBU7E912_0478COXBU7E912_0412COXBU7E912_0413COXBU7E912_2019COXBU7E912_2018COXBU7E912_0413
RAKA293614 A1C_01700A1C_02315A1C_02310A1C_02265A1C_06010A1C_02310
RRIC392021 A1G_01780A1G_02405A1G_02400A1G_02315A1G_06560A1G_02400
RRIC452659 RRIOWA_0377RRIOWA_0505RRIOWA_0504RRIOWA_0487RRIOWA_1405RRIOWA_0504
BQUI283165 BQ11870BQ11860BQ11840BQ11850BQ11820BQ11770BQ11710
BBAC360095 BARBAKC583_0149BARBAKC583_0148BARBAKC583_0146BARBAKC583_0147BARBAKC583_0144BARBAKC583_0165BARBAKC583_0173
RCON272944 RC0312RC0423RC0422RC0406RC1200RC0422
RMAS416276 RMA_0318RMA_0433RMA_0432RMA_0416RMA_1215RMA_0432
NWIN323098 NWI_2724NWI_2713NWI_2723NWI_2719NWI_2720NWI_2717NWI_2714NWI_2040
SACI56780 SYN_02971SYN_00190SYN_00892SYN_00186SYN_00185SYN_00188SYN_00189SYN_00185
RBEL391896 A1I_06620A1I_06465A1I_06470A1I_06455A1I_07275A1I_06470
PSP312153 PNUC_1880PNUC_0273PNUC_1340PNUC_0277PNUC_0278PNUC_0275PNUC_0274PNUC_0278


Organism features enriched in list (features available for 15 out of the 15 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Q_fever 0.000618922
Disease:Rocky_Mountain_Spotted_Fever 0.000013833
GC_Content_Range7:30-40 0.00764749166
Genome_Size_Range5:0-2 0.00475179155
Genome_Size_Range9:1-2 0.00116659128
Gram_Stain:Gram_Neg 0.002300314333
Motility:Yes 0.00714032267
Pathogenic_in:No 0.00561401226
Shape:Coccobacillus 0.0019311311



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462060.7636
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951800.7573
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002270.7507
PWY-1269 (CMP-KDO biosynthesis I)3252300.7080
PWY-5918 (heme biosynthesis I)2722080.7003
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251860.6942
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862120.6883
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912140.6882
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491450.6869
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181810.6828
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962150.6816
TYRFUMCAT-PWY (tyrosine degradation I)1841630.6767
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482320.6675
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902090.6577
PWY-4041 (γ-glutamyl cycle)2792010.6342
PWY-5028 (histidine degradation II)1301260.6250
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831550.6224
PWY-5913 (TCA cycle variation IV)3012080.6223
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392200.6085
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911550.5931
PWY-5148 (acyl-CoA hydrolysis)2271690.5708
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551800.5613
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292090.5592
AST-PWY (arginine degradation II (AST pathway))1201120.5583
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911500.5572
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561320.5568
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761410.5463
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491740.5382
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491740.5382
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351170.5290
P344-PWY (acrylonitrile degradation)2101550.5281
REDCITCYC (TCA cycle variation II)1741370.5243
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381180.5237
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001920.5189
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222330.5177
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982250.5114
DAPLYSINESYN-PWY (lysine biosynthesis I)3422060.5084
PWY-46 (putrescine biosynthesis III)1381150.4998
GLUCONSUPER-PWY (D-gluconate degradation)2291590.4959
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162280.4947
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96900.4916
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261970.4870
GALACTCAT-PWY (D-galactonate degradation)104940.4845
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112980.4789
VALDEG-PWY (valine degradation I)2901820.4786
P601-PWY (D-camphor degradation)95870.4695
PWY0-862 (cis-dodecenoyl biosynthesis)3432000.4661
PWY-6087 (4-chlorocatechol degradation)2231520.4661
PWY-3162 (tryptophan degradation V (side chain pathway))94860.4658
GALACTARDEG-PWY (D-galactarate degradation I)1511170.4618
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652070.4617
PWY-5386 (methylglyoxal degradation I)3051850.4598
PWY-5340 (sulfate activation for sulfonation)3852130.4574
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742090.4548
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111860.4513
PWY0-501 (lipoate biosynthesis and incorporation I)3852120.4505
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94840.4474
GALACTITOLCAT-PWY (galactitol degradation)73710.4460
KDOSYN-PWY (KDO transfer to lipid IVA I)1801290.4440
GLUCARDEG-PWY (D-glucarate degradation I)1521150.4424
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891760.4414
PWY-5188 (tetrapyrrole biosynthesis I)4392270.4403
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791280.4402
PWY-6193 (3-chlorocatechol degradation II (ortho))1941350.4395
GLUT-REDOX-PWY (glutathione redox reactions II)2461580.4387
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121430.4378
PWY-1501 (mandelate degradation I)73690.4254
PWY-5025 (IAA biosynthesis IV)92800.4211
PWY-2361 (3-oxoadipate degradation)82740.4203
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)1351030.4165
PWY1-3 (polyhydroxybutyrate biosynthesis)115920.4131
PROSYN-PWY (proline biosynthesis I)4752330.4126
PWY-81 (toluene degradation to benzoyl-CoA (anaerobic))67640.4125
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171820.4098
PWY-5938 ((R)-acetoin biosynthesis I)3762030.4097
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81720.4065
LIPASYN-PWY (phospholipases)2121380.4029
PWY0-1313 (acetate conversion to acetyl-CoA)3852050.4029
PWY0-1337 (oleate β-oxidation)1991320.4018



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12854   EG11110   EG11011   EG11010   EG11008   EG10684   EG10271   
RUVB0.9993280.9996650.9995980.9996630.9995440.9994980.999335
EG128540.9996560.9997660.9997710.9998810.9999160.999434
EG111100.9998630.9999190.9997950.9997410.99972
EG110110.9999740.9999370.9998650.999895
EG110100.999930.9998540.999902
EG110080.9999690.999758
EG106840.999627
EG10271



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PAIRWISE BLAST SCORES:

  RUVB   EG12854   EG11110   EG11011   EG11010   EG11008   EG10684   EG10271   
RUVB0.0f0-------
EG12854-0.0f0------
EG11110--0.0f0-----
EG11011---0.0f0----
EG11010----0.0f0---
EG11008-----0.0f0--
EG10684------0.0f0-
EG10271----1.2e-20--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2201 (The Tol-Pal Cell Envelope Complex) (degree of match pw to cand: 0.833, degree of match cand to pw: 0.625, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG10684 (pal) EG10684-MONOMER (Pal)
   *in cand* 0.9997 0.9993 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9999 0.9995 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9999 0.9996 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9999 0.9997 EG11010 (tolQ) EG11010-MONOMER (TolQ)
             0.9986 0.9941 EG11007 (tolA) EG11007-MONOMER (TolA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
   *in cand* 0.9998 0.9997 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9996 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)

- CPLX0-2202 (Colicin S4 Transport System) (degree of match pw to cand: 0.714, degree of match cand to pw: 0.625, average score: 0.867)
  Genes in pathway or complex:
             0.5309 0.3679 EG11124 (ompW) EG11124-MONOMER (OmpW, outer membrane protein)
             0.9986 0.9941 EG11007 (tolA) EG11007-MONOMER (TolA)
   *in cand* 0.9999 0.9997 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9999 0.9996 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9999 0.9995 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9997 0.9993 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9998 0.9995 EG10684 (pal) EG10684-MONOMER (Pal)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
   *in cand* 0.9998 0.9997 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9996 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)

- CPLX0-2221 (The Colicin A Import System) (degree of match pw to cand: 0.625, degree of match cand to pw: 0.625, average score: 0.867)
  Genes in pathway or complex:
             0.9986 0.9941 EG11007 (tolA) EG11007-MONOMER (TolA)
   *in cand* 0.9999 0.9997 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9999 0.9996 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9999 0.9995 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9997 0.9993 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9998 0.9995 EG10684 (pal) EG10684-MONOMER (Pal)
             0.6917 0.1339 EG10671 (ompF) EG10671-MONOMER (OmpF)
             0.7999 0.6490 EG10126 (btuB) EG10126-MONOMER (outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
   *in cand* 0.9998 0.9997 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9996 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10684 EG11008 EG11010 EG11011 EG11110 EG12854 (centered at EG11008)
EG10271 (centered at EG10271)
RUVB (centered at RUVB)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  RUVB   EG12854   EG11110   EG11011   EG11010   EG11008   EG10684   EG10271   
415/623226/623316/623284/623277/623336/623313/623269/623
AAEO224324:0:Tyes-0182-----
AAVE397945:0:Tyes19731157201115911581
ABAC204669:0:Tyes3990082434365215
ABAU360910:0:Tyes0-132134133136137133
ABOR393595:0:Tyes07132562
ABUT367737:0:Tyes--0-----
ACAU438753:0:Tyes0713256751
ACEL351607:0:Tyes0-------
ACRY349163:8:Tyes2553-255225502551254802551
ADEH290397:0:Tyes--99223027003
AEHR187272:0:Tyes25220-45215
AFER243159:0:Tyes91867407
AHYD196024:0:Tyes110645215
ALAI441768:0:Tyes--0-----
AMAR234826:0:Tyes----69044069
AMAR329726:7:Tyes-----0--
AMAR329726:9:Tyes0-------
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