CANDIDATE ID: 90

CANDIDATE ID: 90

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9969410e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.7142857e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G363 (flgG) (b1078)
   Products of gene:
     - FLGG-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgG)
     - FLAGELLAR-MOTOR-COMPLEX (Flagellar Motor Complex)
     - CPLX0-7452 (Flagellum)

- G362 (flgF) (b1077)
   Products of gene:
     - FLGF-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgF)
     - FLAGELLAR-MOTOR-COMPLEX (Flagellar Motor Complex)
     - CPLX0-7452 (Flagellum)

- G361 (flgE) (b1076)
   Products of gene:
     - G361-MONOMER (flagellar hook protein FlgE)
     - CPLX0-7452 (Flagellum)

- G360 (flgD) (b1075)
   Products of gene:
     - G360-MONOMER (flagellar biosynthesis, initiation of hook assembly)

- G359 (flgC) (b1074)
   Products of gene:
     - FLGC-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgC)
     - FLAGELLAR-MOTOR-COMPLEX (Flagellar Motor Complex)
     - CPLX0-7452 (Flagellum)

- G358 (flgB) (b1073)
   Products of gene:
     - FLGB-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgB)
     - FLAGELLAR-MOTOR-COMPLEX (Flagellar Motor Complex)
     - CPLX0-7452 (Flagellum)

- G357 (flgA) (b1072)
   Products of gene:
     - G357-MONOMER (flagellar biosynthesis; assembly of basal-body periplasmic P ring)



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 192
Effective number of orgs (counting one per cluster within 468 clusters): 130

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM46
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-27
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79017
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB46
TSP28240 Thermotoga sp.6
TSP1755 Thermoanaerobacter sp.6
TROS309801 ncbi Thermomicrobium roseum DSM 51596
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332236
TPET390874 ncbi Thermotoga petrophila RKU-16
TMAR243274 ncbi Thermotoga maritima MSB86
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12516
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
SSON300269 ncbi Shigella sonnei Ss0467
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans7
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2277
SACI56780 ncbi Syntrophus aciditrophicus SB6
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170256
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170296
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSOL267608 ncbi Ralstonia solanacearum GMI10007
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RMET266264 ncbi Ralstonia metallidurans CH347
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS97
PMOB403833 ncbi Petrotoga mobilis SJ956
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251967
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
MSP409 Methylobacterium sp.7
MSP400668 ncbi Marinomonas sp. MWYL16
MPET420662 ncbi Methylibium petroleiphilum PM17
MFLA265072 ncbi Methylobacillus flagellatus KT7
MEXT419610 ncbi Methylobacterium extorquens PA16
MAQU351348 ncbi Marinobacter aquaeolei VT86
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-006
LCHO395495 ncbi Leptothrix cholodnii SP-66
JSP375286 ncbi Janthinobacterium sp. Marseille7
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HNEP81032 Hyphomonas neptunium6
HHAL349124 ncbi Halorhodospira halophila SL16
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans7
GURA351605 ncbi Geobacter uraniireducens Rf46
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GMET269799 ncbi Geobacter metallireducens GS-156
ESP42895 Enterobacter sp.7
EFER585054 ncbi Escherichia fergusonii ATCC 354697
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a7
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A7
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough6
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G206
DARO159087 ncbi Dechloromonas aromatica RCB7
CVIO243365 ncbi Chromobacterium violaceum ATCC 124727
CSP78 Caulobacter sp.6
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CPSY167879 ncbi Colwellia psychrerythraea 34H7
CJEJ407148 ncbi Campylobacter jejuni jejuni 811166
CJEJ360109 ncbi Campylobacter jejuni doylei 269.976
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1766
CJEJ195099 ncbi Campylobacter jejuni RM12216
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111686
CJAP155077 Cellvibrio japonicus6
CFET360106 ncbi Campylobacter fetus fetus 82-406
CCUR360105 ncbi Campylobacter curvus 525.926
CCON360104 ncbi Campylobacter concisus 138266
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTUR314724 ncbi Borrelia turicatae 91E1356
BTHA271848 ncbi Burkholderia thailandensis E2647
BSUI470137 ncbi Brucella suis ATCC 234456
BSUI204722 ncbi Brucella suis 13306
BSP36773 Burkholderia sp.7
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)7
BPSE320373 ncbi Burkholderia pseudomallei 6687
BPSE320372 ncbi Burkholderia pseudomallei 1710b7
BPSE272560 ncbi Burkholderia pseudomallei K962437
BPET94624 Bordetella petrii7
BPER257313 ncbi Bordetella pertussis Tohama I7
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis6
BMEL359391 ncbi Brucella melitensis biovar Abortus 23086
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M6
BMAL320389 ncbi Burkholderia mallei NCTC 102477
BMAL320388 ncbi Burkholderia mallei SAVP17
BMAL243160 ncbi Burkholderia mallei ATCC 233447
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BGAR290434 ncbi Borrelia garinii PBi6
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BCAN483179 ncbi Brucella canis ATCC 233656
BBRO257310 ncbi Bordetella bronchiseptica RB507
BBAC360095 ncbi Bartonella bacilliformis KC5836
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)7
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9416
ASP62928 ncbi Azoarcus sp. BH727
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
AMET293826 ncbi Alkaliphilus metalliredigens QYMF6
AHYD196024 Aeromonas hydrophila dhakensis7
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-17
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABAU360910 ncbi Bordetella avium 197N7
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3456
AAVE397945 ncbi Acidovorax citrulli AAC00-17


Names of the homologs of the genes in the group in each of these orgs
  G363   G362   G361   G360   G359   G358   G357   
ZMOB264203 ZMO0609ZMO0610ZMO0611ZMO0612ZMO0613ZMO0614
YPSE349747 YPSIP31758_2319YPSIP31758_2320YPSIP31758_2321YPSIP31758_2322YPSIP31758_2323YPSIP31758_2324YPSIP31758_2325
YPSE273123 YPTB1677YPTB1676YPTB1675YPTB1674YPTB1673YPTB1672YPTB1671
YPES386656 YPDSF_1320YPDSF_1321YPDSF_1322YPDSF_1323YPDSF_1324YPDSF_1325YPDSF_1326
YPES377628 YPN_2320YPN_2321YPN_2322YPN_2323YPN_2324YPN_2325YPN_2326
YPES360102 YPA_1179YPA_1178YPA_1177YPA_1176YPA_1175YPA_1174YPA_1173
YPES349746 YPANGOLA_A2003YPANGOLA_A2002YPANGOLA_A2001YPANGOLA_A2000YPANGOLA_A1999YPANGOLA_A1998YPANGOLA_A1997
YPES214092 YPO1804YPO1803YPO1802YPO1801YPO1800YPO1799YPO1798
YPES187410 Y2505Y2506Y2507Y2508Y2509Y2510Y2511
YENT393305 YE2555YE2556YE2557YE2558YE2559YE2560YE2561
XORY360094 XOOORF_2807XOOORF_2806XOOORF_2804XOOORF_2803XOOORF_2802XOOORF_2801
XORY342109 XOO2433XOO2432XOO2431XOO2430XOO2429XOO2428
XORY291331 XOO2575XOO2574XOO2572XOO2571XOO2570XOO2569
XCAM487884 XCC-B100_2245XCC-B100_2246XCC-B100_2247XCC-B100_2248XCC-B100_2249XCC-B100_2250
XCAM316273 XCAORF_2226XCAORF_2227XCAORF_2228XCAORF_2229XCAORF_2230XCAORF_2231
XCAM314565 XC_2239XC_2238XC_2237XC_2236XC_2235XC_2234
XCAM190485 XCC1947XCC1948XCC1949XCC1950XCC1951XCC1952
XAXO190486 XAC1981XAC1982XAC1983XAC1984XAC1985XAC1986
VPAR223926 VP0781VP0780VPA0267VP0777VP0776VP0775
VFIS312309 VF1872VF1873VF1872VF1875VF1876VF1877
VEIS391735 VEIS_0564VEIS_0565VEIS_0566VEIS_0567VEIS_0568VEIS_0569VEIS_0570
VCHO345073 VC0395_A1787VC0395_A1788VC0395_A1787VC0395_A1790VC0395_A1791VC0395_A1792
VCHO VC2195VC2196VC2195VC2198VC2199VC2200
TTUR377629 TERTU_1230TERTU_1229TERTU_1225TERTU_1224TERTU_1223TERTU_1222TERTU_1219
TTEN273068 TTE0173TTE0172TTE1433TTE1435TTE1444TTE1445
TSP28240 TRQ2_1205TRQ2_1205TRQ2_1205TRQ2_0256TRQ2_1464TRQ2_1465
TSP1755 TETH514_0111TETH514_0111TETH514_1684TETH514_1686TETH514_1695TETH514_1696
TROS309801 TRD_A0642TRD_A0044TRD_A0642TRD_A0643TRD_A0653TRD_A0645
TPSE340099 TETH39_2092TETH39_2092TETH39_1248TETH39_1250TETH39_1259TETH39_1260
TPET390874 TPET_1250TPET_1250TPET_1250TPET_0258TPET_1418TPET_1419
TMAR243274 TM_1542TM_1542TM_1542TM_0673TM_1365TM_1364
TDEN326298 TMDEN_1103TMDEN_1103TMDEN_0032TMDEN_0030TMDEN_0364TMDEN_0365
TDEN292415 TBD_1632TBD_1633TBD_1634TBD_1635TBD_1636TBD_1637
STYP99287 STM1179STM1178STM1177STM1176STM1175STM1174STM1173
SSON300269 SSO_1096SSO_1097SSO_1096SSO_1095SSO_1094SSO_1093SSO_1092
SSED425104 SSED_3082SSED_3083SSED_0066SSED_3085SSED_3086SSED_3087
SPRO399741 SPRO_2965SPRO_2966SPRO_2967SPRO_2968SPRO_2969SPRO_2970SPRO_2971
SPEA398579 SPEA_1345SPEA_1344SPEA_0072SPEA_1342SPEA_1341SPEA_1340
SHIGELLA FLGGFLGGFLGEFLGDFLGBFLGA
SHAL458817 SHAL_1432SHAL_1431SHAL_4250SHAL_1429SHAL_1428SHAL_1427
SGLO343509 SG0035SG0034SG0033SG2059SG0031SG2060SG0029
SFLE373384 SFV_1100SFV_1099SFV_1098SFV_1097SFV_1095SFV_1094
SFLE198214 AAN42703.1AAN42703.1AAN42702.1AAN42702.1AAN42701.1AAN42700.1
SENT454169 SEHA_C1291SEHA_C1290SEHA_C1289SEHA_C1288SEHA_C1287SEHA_C1286SEHA_C1285
SENT321314 SCH_1126SCH_1125SCH_1124SCH_1123SCH_1122SCH_1121SCH_1120
SENT295319 SPA1672SPA1673SPA1674SPA1675SPA1676SPA1677SPA1678
SENT220341 STY1218STY1217STY1216STY1215STY1214STY1213STY1212
SENT209261 T1741T1742T1743T1744T1745T1746T1747
SDYS300267 SDY_2075SDY_2075SDY_2076SDY_2077SDY_2078SDY_2080
SDEN318161 SDEN_1308SDEN_1307SDEN_3648SDEN_3649SDEN_1304SDEN_1303
SDEG203122 SDE_2208SDE_2209SDE_2208SDE_2211SDE_2212SDE_2213
SBOY300268 SBO_1986SBO_1987SBO_1988SBO_1989SBO_1990SBO_1991SBO_1992
SACI56780 SYN_02819SYN_02820SYN_02839SYN_02840SYN_01468SYN_01467
RSPH349102 RSPH17025_1667RSPH17025_1668RSPH17025_1669RSPH17025_1670RSPH17025_1671RSPH17025_1672
RSPH349101 RSPH17029_1714RSPH17029_1715RSPH17029_1716RSPH17029_1717RSPH17029_1718RSPH17029_1719
RSPH272943 RSP_0078RSP_0079RSP_0080RSP_0081RSP_0082RSP_0083
RSOL267608 RSP0347RSP0346RSP0345RSP0344RSP0343RSP0342RSP0341
RRUB269796 RRU_A2843RRU_A2842RRU_A2532RRU_A0547RRU_A2825RRU_A2826
RPAL316058 RPB_3787RPB_3787RPB_0765RPB_0764RPB_3776RPB_3777
RPAL316056 RPC_1506RPC_1506RPC_0871RPC_0870RPC_1095RPC_1094
RPAL316055 RPE_1537RPE_1537RPE_1172RPE_0778RPE_1156RPE_1155
RMET266264 RMET_3739RMET_3738RMET_3737RMET_3736RMET_3735RMET_3734RMET_3733
RFER338969 RFER_3719RFER_3718RFER_3717RFER_3716RFER_3715RFER_3714
REUT381666 H16_B0266H16_B0265H16_B0264H16_B0263H16_B0262H16_B0261H16_B0260
REUT264198 REUT_B5630REUT_B5629REUT_B5628REUT_B5627REUT_B5626REUT_B5625REUT_B5624
PTHE370438 PTH_2080PTH_2067PTH_2080PTH_2082PTH_2091PTH_2092
PSYR223283 PSPTO_1940PSPTO_1939PSPTO_1937PSPTO_1935PSPTO_1934PSPTO_1933
PSYR205918 PSYR_3475PSYR_3476PSYR_3477PSYR_3479PSYR_3480PSYR_3481
PSTU379731 PST_1393PST_1392PST_1391PST_1390PST_1389PST_1388
PPUT76869 PPUTGB1_3946PPUTGB1_3947PPUTGB1_3949PPUTGB1_3950PPUTGB1_3951PPUTGB1_3952
PPUT351746 PPUT_1470PPUT_1469PPUT_1467PPUT_1466PPUT_1465PPUT_1464
PPUT160488 PP_4385PP_4386PP_4388PP_4389PP_4390PP_4391
PPRO298386 PBPRA0906PBPRA0034PBPRA0033PBPRA0903PBPRA0902PBPRA0901PBPRA0898
PMOB403833 PMOB_0333PMOB_0333PMOB_0108PMOB_0107PMOB_1685PMOB_1684
PMEN399739 PMEN_2845PMEN_2846PMEN_2847PMEN_2848PMEN_2849PMEN_2850
PLUM243265 PLU1920PLU1919PLU1918PLU1917PLU1916PLU1915PLU1914
PING357804 PING_3573PING_3574PING_3575PING_3576PING_3577PING_3578
PHAL326442 PSHAA0774PSHAA0773PSHAA0772PSHAA0771PSHAA0770PSHAA0769
PFLU220664 PFL_1614PFL_1613PFL_4477PFL_4478PFL_4479PFL_4480
PFLU216595 PFLU4455PFLU4456PFLU4728PFLU4729PFLU4730PFLU4731
PFLU205922 PFL_1502PFL_1501PFL_4248PFL_4249PFL_4250PFL_4251
PENT384676 PSEEN3836PSEEN3837PSEEN3839PSEEN3840PSEEN3841PSEEN3842
PCAR338963 PCAR_1156PCAR_1156PCAR_1183PCAR_1185PCAR_1194PCAR_1195
PATL342610 PATL_3095PATL_3096PATL_3097PATL_3098PATL_3099PATL_3100
PAER208964 PA1082PA1081PA1080PA1079PA1078PA1077
PAER208963 PA14_50430PA14_50440PA14_50450PA14_50460PA14_50470PA14_50480
OANT439375 OANT_4209OANT_4209OANT_4193OANT_4188OANT_4211OANT_4212
NOCE323261 NOC_2373NOC_2374NOC_2375NOC_2376NOC_2377NOC_2378
NMUL323848 NMUL_A1326NMUL_A1325NMUL_A1324NMUL_A1323NMUL_A1322NMUL_A1321NMUL_A1318
NEUT335283 NEUT_0340NEUT_0339NEUT_0338NEUT_0337NEUT_0336NEUT_0335NEUT_0334
NEUR228410 NE0307NE0306NE0305NE0304NE0303NE0302NE0301
MSP409 M446_4197M446_4198M446_6506M446_5120M446_3674M446_5155M446_4196
MSP400668 MMWYL1_3578MMWYL1_3579MMWYL1_3580MMWYL1_3581MMWYL1_3582MMWYL1_3583
MPET420662 MPE_A3068MPE_A3069MPE_A3070MPE_A3071MPE_A3072MPE_A3073MPE_A3074
MFLA265072 MFLA_1959MFLA_1958MFLA_1957MFLA_1956MFLA_1955MFLA_1954MFLA_1953
MEXT419610 MEXT_3047MEXT_3048MEXT_0683MEXT_4094MEXT_0619MEXT_0618
MAQU351348 MAQU_1107MAQU_1106MAQU_1105MAQU_1104MAQU_1103MAQU_1102
LPNE400673 LPC_0690LPC_0689LPC_0688LPC_0687LPC_0686LPC_0685
LPNE297246 LPP1229LPP1228LPP1227LPP1226LPP1225LPP1224
LPNE297245 LPL1229LPL1228LPL1227LPL1226LPL1225LPL1224
LPNE272624 LPG1221LPG1220LPG1219LPG1218LPG1217LPG1216
LINT363253 LI0741LI0740LI0566LI0567LI0859LI0860
LCHO395495 LCHO_2729LCHO_2730LCHO_2731LCHO_2732LCHO_2733LCHO_2734
JSP375286 MMA_1423MMA_1422MMA_1421MMA_1420MMA_1419MMA_1418MMA_1417
ILOI283942 IL1142IL1143IL1144IL1145IL1146IL1147
HNEP81032 HNE_0256HNE_0255HNE_0256HNE_0260HNE_0270HNE_0269
HHAL349124 HHAL_0515HHAL_0516HHAL_0517HHAL_0518HHAL_0519HHAL_0520
HCHE349521 HCH_04477HCH_04478HCH_04479HCH_04480HCH_04481HCH_04482
HARS204773 HEAR1896HEAR1897HEAR1898HEAR1899HEAR1900HEAR1901HEAR1902
GURA351605 GURA_4106GURA_4107GURA_4106GURA_4206GURA_4215GURA_4216
GSUL243231 GSU_3051GSU_3052GSU_0419GSU_0417GSU_0408GSU_0407
GMET269799 GMET_0431GMET_0430GMET_3103GMET_3105GMET_3114GMET_3115
ESP42895 ENT638_1592ENT638_1591ENT638_1590ENT638_1589ENT638_1588ENT638_1587ENT638_1586
EFER585054 EFER_1850EFER_1852EFER_1853EFER_1854EFER_1855EFER_1856EFER_1857
ECOO157 FLGGFLGFFLGEFLGDFLGCFLGBFLGA
ECOL83334 ECS1456ECS1455ECS1454ECS1453ECS1452ECS1451ECS1450
ECOL585397 ECED1_1222ECED1_1221ECED1_1220ECED1_1219ECED1_1218ECED1_1217ECED1_1216
ECOL585057 ECIAI39_2085ECIAI39_2086ECIAI39_2087ECIAI39_2088ECIAI39_2089ECIAI39_2090ECIAI39_2091
ECOL585056 ECUMN_1252ECUMN_1251ECUMN_1250ECUMN_1249ECUMN_1248ECUMN_1247ECUMN_1246
ECOL585055 EC55989_1191EC55989_1190EC55989_1189EC55989_1188EC55989_1187EC55989_1186EC55989_1185
ECOL585035 ECS88_1092ECS88_1091ECS88_1090ECS88_1089ECS88_1088ECS88_1087ECS88_1086
ECOL585034 ECIAI1_1114ECIAI1_1113ECIAI1_1114ECIAI1_1110ECIAI1_1109ECIAI1_1108ECIAI1_1107
ECOL481805 ECOLC_2522ECOLC_2523ECOLC_2524ECOLC_2525ECOLC_2526ECOLC_2527ECOLC_2528
ECOL469008 ECBD_2522ECBD_2523ECBD_2524ECBD_2525ECBD_2526ECBD_2527ECBD_2528
ECOL439855 ECSMS35_2050ECSMS35_2051ECSMS35_2052ECSMS35_2053ECSMS35_2054ECSMS35_2055ECSMS35_2057
ECOL413997 ECB_01074ECB_01073ECB_01072ECB_01071ECB_01070ECB_01069ECB_01068
ECOL409438 ECSE_1141ECSE_1140ECSE_1139ECSE_1138ECSE_1137ECSE_1136ECSE_1135
ECOL405955 APECO1_160APECO1_159APECO1_158APECO1_157APECO1_156APECO1_155APECO1_154
ECOL364106 UTI89_C1203UTI89_C1202UTI89_C1201UTI89_C1200UTI89_C1199UTI89_C1198UTI89_C1197
ECOL362663 ECP_1070ECP_1069ECP_1068ECP_1067ECP_1066ECP_1065ECP_1064
ECOL331111 ECE24377A_1201ECE24377A_1200ECE24377A_1199ECE24377A_1198ECE24377A_1197ECE24377A_1196ECE24377A_1195
ECOL316407 ECK1063:JW1065:B1078ECK1062:JW1064:B1077ECK1061:JW1063:B1076ECK1060:JW1062:B1075ECK1059:JW1061:B1074ECK1058:JW1060:B1073ECK1057:JW1059:B1072
ECOL199310 C1347C1346C1345C1344C1343C1342C1341
ECAR218491 ECA1707ECA1706ECA1705ECA1704ECA1703ECA1702ECA1701
DVUL882 DVU_0513DVU_0512DVU_0307DVU_1444DVU_0315DVU_0316
DPSY177439 DP2681DP2681DP2664DP2663DP2654DP2653
DDES207559 DDE_3158DDE_3159DDE_0298DDE_1712DDE_0355DDE_0356
DARO159087 DARO_0754DARO_0753DARO_0752DARO_0751DARO_0750DARO_2272DARO_0748
CVIO243365 CV_2883CV_1705CV_2885CV_2886CV_2887CV_2888CV_0999
CSP78 CAUL_1431CAUL_1432CAUL_1431CAUL_1009CAUL_1367CAUL_1366
CSAL290398 CSAL_1973CSAL_1974CSAL_1975CSAL_1976CSAL_1977CSAL_1978CSAL_1979
CPSY167879 CPS_1482CPS_1481CPS_1482CPS_1479CPS_1478CPS_1477CPS_1473
CJEJ407148 C8J_0665C8J_0665C8J_0665C8J_0045C8J_0488C8J_0489
CJEJ360109 JJD26997_1308JJD26997_1308JJD26997_1308JJD26997_0057JJD26997_1403JJD26997_1402
CJEJ354242 CJJ81176_0721CJJ81176_0721CJJ81176_0721CJJ81176_0080CJJ81176_0552CJJ81176_0553
CJEJ195099 CJE_0797CJE_0797CJE_1896CJE_0041CJE_0631CJE_0632
CJEJ192222 CJ0698CJ0698CJ0698CJ0042CJ0527CCJ0528C
CJAP155077 CJA_1926CJA_1927CJA_1928CJA_1929CJA_1930CJA_1931
CFET360106 CFF8240_0523CFF8240_0523CFF8240_1769CFF8240_0009CFF8240_0705CFF8240_0706
CCUR360105 CCV52592_0104CCV52592_0104CCV52592_2040CCV52592_2048CCV52592_0692CCV52592_0693
CCON360104 CCC13826_2184CCC13826_2184CCC13826_1862CCC13826_1122CCC13826_0057CCC13826_0058
BVIE269482 BCEP1808_3105BCEP1808_3106BCEP1808_3107BCEP1808_3108BCEP1808_3109BCEP1808_3110BCEP1808_3111
BTUR314724 BT0774BT0775BT0283BT0284BT0293BT0294
BTHA271848 BTH_I0245BTH_I0244BTH_I0243BTH_I0242BTH_I0241BTH_I0240BTH_I0239
BSUI470137 BSUIS_B0158BSUIS_B0158BSUIS_B1366BSUIS_B1361BSUIS_B0156BSUIS_B0155
BSUI204722 BR_A0154BR_A0154BR_A1139BR_A1134BR_A0152BR_A0151
BSP36773 BCEP18194_A6366BCEP18194_A6367BCEP18194_A6368BCEP18194_A6369BCEP18194_A6370BCEP18194_A6371BCEP18194_A6372
BSP107806 BU342BU341BU340BU339BU338BU337BU336
BPSE320373 BURPS668_0271BURPS668_0270BURPS668_0269BURPS668_0268BURPS668_0267BURPS668_A0237BURPS668_0265
BPSE320372 BURPS1710B_A0487BURPS1710B_A0486BURPS1710B_A0485BURPS1710B_A0484BURPS1710B_A0483BURPS1710B_A0482BURPS1710B_A0481
BPSE272560 BPSL0275BPSL0274BPSL0273BPSL0272BPSL0271BPSL0270BPSL0269
BPET94624 BPET2126BPET2125BPET2124BPET2123BPET2122BPET2121BPET2120
BPER257313 BP1378BP1377BP1376BP1375BP1374BP1373BP1372
BPAR257311 BPP1489BPP1488BPP1487BPP1486BPP1485BPP1484
BOVI236 GBOORFA0150GBOORFA0150GBOORFA0150GBOORFA1125GBOORFA0148GBOORFA0147
BMEL359391 BAB2_0151BAB2_0151BAB2_1098BAB2_1093BAB2_0149BAB2_0148
BMEL224914 BMEII1086BMEII1086BMEII0159BMEII0164BMEII1088BMEII1089
BMAL320389 BMA10247_3349BMA10247_3350BMA10247_3351BMA10247_3352BMA10247_3353BMA10247_3354BMA10247_3356
BMAL320388 BMASAVP1_A2999BMASAVP1_A2998BMASAVP1_A2997BMASAVP1_A2996BMASAVP1_A2995BMASAVP1_A2994BMASAVP1_A2992
BMAL243160 BMA_3330BMA_3329BMA_3328BMA_3327BMA_3326BMA_3325BMA_3323
BJAP224911 BLR5828BLR5828BLL6858BLL6853BLL6875BLL5814
BGAR290434 BG0798BG0799BG0286BG0287BG0296BG0297
BCEN331272 BCEN2424_3020BCEN2424_3021BCEN2424_3022BCEN2424_3023BCEN2424_3024BCEN2424_3025BCEN2424_3026
BCEN331271 BCEN_2406BCEN_2407BCEN_2408BCEN_2409BCEN_2410BCEN_2411BCEN_2412
BCAN483179 BCAN_B0155BCAN_B0155BCAN_B1168BCAN_B1163BCAN_B0153BCAN_B0152
BBRO257310 BB2564BB2563BB2562BB2561BB2560BB2559BB2558
BBAC360095 BARBAKC583_1141BARBAKC583_1141BARBAKC583_1122BARBAKC583_1117BARBAKC583_1143BARBAKC583_1144
BAPH198804 BUSG330BUSG329BUSG328BUSG327BUSG326BUSG325BUSG324
BAMB398577 BAMMC406_2930BAMMC406_2931BAMMC406_2932BAMMC406_2933BAMMC406_2934BAMMC406_2935BAMMC406_2936
BAMB339670 BAMB_3065BAMB_3066BAMB_3067BAMB_3068BAMB_3069BAMB_3070BAMB_3071
BABO262698 BRUAB2_0150BRUAB2_0150BRUAB2_1076BRUAB2_1071BRUAB2_0148BRUAB2_0147
ASP62928 AZO2735AZO2736AZO2737AZO2738AZO2739AZO2740AZO2741
ASP232721 AJS_3832AJS_3831AJS_3830AJS_3829AJS_3828AJS_3827
ASAL382245 ASA_1494ASA_1493ASA_0366ASA_1491ASA_1490ASA_1489ASA_0362
AMET293826 AMET_0370AMET_0370AMET_2716AMET_2718AMET_2727AMET_2728
AHYD196024 AHA_2837AHA_2838AHA_2839AHA_2840AHA_2841AHA_2842AHA_2845
AEHR187272 MLG_0898MLG_0897MLG_0896MLG_0895MLG_0894MLG_0893MLG_0890
ADEH290397 ADEH_1351ADEH_1351ADEH_1387ADEH_1388ADEH_1396ADEH_1397
ACAU438753 AZC_0634AZC_0645AZC_0634AZC_0652AZC_0636AZC_0637
ABAU360910 BAV1693BAV1692BAV1691BAV1690BAV1689BAV1688BAV1687
ABAC204669 ACID345_2923ACID345_2922ACID345_1645ACID345_1646ACID345_1654ACID345_1655
AAVE397945 AAVE_4425AAVE_4424AAVE_4423AAVE_4422AAVE_4421AAVE_4420AAVE_4419


Organism features enriched in list (features available for 179 out of the 192 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Brucellosis 0.002623855
Disease:Bubonic_plague 0.000789866
Disease:Dysentery 0.000789866
Disease:Gastroenteritis 0.00062301013
Disease:Legionnaire's_disease 0.008680944
Endospores:No 0.000068445211
Endospores:Yes 3.501e-6353
GC_Content_Range4:0-40 4.854e-1624213
GC_Content_Range4:40-60 8.585e-692224
GC_Content_Range4:60-100 0.000066963145
GC_Content_Range7:0-30 0.0001435447
GC_Content_Range7:30-40 6.015e-1120166
GC_Content_Range7:50-60 2.177e-1061107
GC_Content_Range7:60-70 6.453e-662134
Genome_Size_Range5:0-2 1.130e-1215155
Genome_Size_Range5:2-4 2.437e-637197
Genome_Size_Range5:4-6 9.310e-19103184
Genome_Size_Range5:6-10 0.00121812447
Genome_Size_Range9:1-2 2.544e-1111128
Genome_Size_Range9:2-3 4.743e-814120
Genome_Size_Range9:4-5 2.628e-85396
Genome_Size_Range9:5-6 2.028e-85088
Genome_Size_Range9:6-8 0.00021722238
Gram_Stain:Gram_Neg 1.546e-29161333
Gram_Stain:Gram_Pos 2.651e-271150
Habitat:Multiple 0.004442767178
Motility:No 3.632e-1610151
Motility:Yes 1.047e-17129267
Optimal_temp.:- 0.002847393257
Optimal_temp.:25-30 0.00001321519
Optimal_temp.:37 0.004233022106
Oxygen_Req:Anaerobic 0.000213017102
Oxygen_Req:Facultative 0.000396679201
Oxygen_Req:Microaerophilic 0.00504751118
Shape:Coccus 7.338e-11382
Shape:Rod 7.591e-10139347
Temp._range:Psychrophilic 0.004191079
Temp._range:Thermophilic 0.0045132435



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 318
Effective number of orgs (counting one per cluster within 468 clusters): 248

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785780
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BQUI283165 ncbi Bartonella quintana Toulouse0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHEN283166 ncbi Bartonella henselae Houston-10
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G363   G362   G361   G360   G359   G358   G357   
XFAS405440
XFAS183190
XFAS160492
XAUT78245
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TPEN368408
TKOD69014
TFUS269800
TERY203124
TELO197221
TACI273075
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSAP342451
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SHAE279808
SGOR29390
SFUM335543
SERY405948
SEPI176280
SEPI176279
SELO269084
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435
SAGA205921
SACI330779
RXYL266117
RTYP257363
RSP357808
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PSP56811
PSP312153
PSP296591
PRUM264731
PPEN278197
PNAP365044
PMUL272843
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PAST100379
PARS340102
PARC259536
PAER178306
PACN267747
PABY272844
OTSU357244
NSP103690
NSEN222891
NPHA348780
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NFAR247156
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LSAK314315
LREU557436
LPLA220668
LMES203120
LLAC272623
LLAC272622
LJOH257314
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
KPNE272620
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HMUK485914
HMAR272569
HINF71421
HINF374930
HINF281310
HDUC233412
HBUT415426
HAUR316274
GVIO251221
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DSP255470
DSP216389
DRAD243230
DOLE96561
DNOD246195
DGEO319795
DETH243164
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1151
CJEI306537
CHUT269798
CHOM360107
CGLU196627
CFEL264202
CEFF196164
CDIP257309
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CABO218497
BXEN266265
BTRI382640
BTHE226186
BQUI283165
BLON206672
BHEN283166
BFRA295405
BFRA272559
BCIC186490
BAPH372461
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62977
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
ANAE240017
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
ABOR393595
AAUR290340


Organism features enriched in list (features available for 299 out of the 318 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.002313099
Arrangment:Clusters 0.00015961617
Arrangment:Filaments 0.00116861010
Arrangment:Singles 0.0050786133286
Disease:Pharyngitis 0.004570488
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00058941111
Disease:Wide_range_of_infections 0.00058941111
Disease:bronchitis_and_pneumonitis 0.004570488
Disease:gastroenteritis 0.0010763113
Endospores:No 1.780e-8140211
Endospores:Yes 6.072e-61253
GC_Content_Range4:0-40 1.942e-8141213
GC_Content_Range4:40-60 0.0061455102224
GC_Content_Range4:60-100 0.000077155145
GC_Content_Range7:30-40 1.277e-7113166
GC_Content_Range7:50-60 0.000122938107
GC_Content_Range7:60-70 3.318e-646134
Genome_Size_Range5:0-2 6.013e-21128155
Genome_Size_Range5:2-4 0.0008411118197
Genome_Size_Range5:4-6 2.148e-2735184
Genome_Size_Range9:0-1 0.00074412227
Genome_Size_Range9:1-2 6.394e-17106128
Genome_Size_Range9:2-3 6.858e-989120
Genome_Size_Range9:3-4 0.00363982977
Genome_Size_Range9:4-5 1.801e-141696
Genome_Size_Range9:5-6 5.289e-101988
Genome_Size_Range9:6-8 0.00227581138
Gram_Stain:Gram_Neg 1.338e-18119333
Gram_Stain:Gram_Pos 1.176e-7104150
Habitat:Host-associated 0.0000720127206
Habitat:Multiple 0.000022869178
Habitat:Terrestrial 0.0020278831
Motility:No 2.518e-30135151
Motility:Yes 6.086e-4852267
Optimal_temp.:- 0.0013091115257
Optimal_temp.:30-35 0.009015677
Optimal_temp.:30-37 0.00380341518
Optimal_temp.:37 0.002133067106
Oxygen_Req:Microaerophilic 0.0000362118
Shape:Coccus 4.626e-187682
Shape:Irregular_coccus 9.355e-61717
Shape:Rod 3.175e-15132347
Shape:Sphere 0.00040211719



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 8
Effective number of orgs (counting one per cluster within 468 clusters): 7

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BGAR290434 ncbi Borrelia garinii PBi 0.00003052246
BTUR314724 ncbi Borrelia turicatae 91E135 0.00005232456
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00029336217
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00035866397
BAFZ390236 ncbi Borrelia afzelii PKo 0.00202562295
BBUR224326 ncbi Borrelia burgdorferi B31 0.00216102325
BHER314723 ncbi Borrelia hermsii DAH 0.00255762405
TPAL243276 ncbi Treponema pallidum pallidum Nichols 0.00307062495


Names of the homologs of the genes in the group in each of these orgs
  G363   G362   G361   G360   G359   G358   G357   
BGAR290434 BG0798BG0799BG0286BG0287BG0296BG0297
BTUR314724 BT0774BT0775BT0283BT0284BT0293BT0294
BAPH198804 BUSG330BUSG329BUSG328BUSG327BUSG326BUSG325BUSG324
BSP107806 BU342BU341BU340BU339BU338BU337BU336
BAFZ390236 BAPKO_0823BAPKO_0293BAPKO_0294BAPKO_0303BAPKO_0304
BBUR224326 BB_0774BB_0283BB_0284BB_0293BB_0294
BHER314723 BH0774BH0283BH0284BH0293BH0294
TPAL243276 TP_0960TP_0960TP_0728TP_0397TP_0396


Organism features enriched in list (features available for 8 out of the 8 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Lyme_disease 0.000165022
Disease:Tick-borne_relapsing_fever 0.000165022
GC_Content_Range4:0-40 0.00419077213
GC_Content_Range7:0-30 1.069e-7747
Genome_Size_Range5:0-2 0.00002188155
Genome_Size_Range9:0-1 7.293e-6527
Habitat:Host-associated 0.00022228206
Optimal_temp.:- 0.00134058257
Shape:Spiral 6.414e-7634



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951450.6365
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181470.5817
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491160.5711
GLYCOCAT-PWY (glycogen degradation I)2461560.5702
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001730.5604
AST-PWY (arginine degradation II (AST pathway))1201000.5555
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251410.5186
PWY-1269 (CMP-KDO biosynthesis I)3251740.5139
TYRFUMCAT-PWY (tyrosine degradation I)1841240.5128
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911260.5062
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761190.5000
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911610.4969
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961620.4927
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901600.4922
PWY-5918 (heme biosynthesis I)2721540.4919
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481760.4813
PWY-5913 (TCA cycle variation IV)3011600.4677
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561060.4648
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861540.4594
GALACTITOLCAT-PWY (galactitol degradation)73630.4378
PWY-4041 (γ-glutamyl cycle)2791480.4335
PWY0-981 (taurine degradation IV)106790.4286
PWY-5148 (acyl-CoA hydrolysis)2271280.4193
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96730.4180
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001520.4143
GLUCARDEG-PWY (D-glucarate degradation I)152980.4141
PWY0-1182 (trehalose degradation II (trehalase))70590.4120
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391630.4085
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135900.4083
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981790.4078
REDCITCYC (TCA cycle variation II)1741060.4058
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138910.4058
PWY-5028 (histidine degradation II)130870.4015
GALACTARDEG-PWY (D-galactarate degradation I)151960.4013
GALACTCAT-PWY (D-galactonate degradation)104750.4004



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G362   G361   G360   G359   G358   G357   
G3630.999960.9998280.9997480.9998280.9997430.999316
G3620.9997960.9997280.9997870.9997040.999313
G3610.9998970.9998260.9997680.999354
G3600.9998750.9998220.99938
G3590.9999810.999433
G3580.999489
G357



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PAIRWISE BLAST SCORES:

  G363   G362   G361   G360   G359   G358   G357   
G3630.0f0-3.6e-33----
G3622.7e-180.0f0-----
G3616.2e-33-0.0f0----
G360---0.0f0---
G359----0.0f0--
G358-----0.0f0-
G357------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- FLAGELLAR-MOTOR-COMPLEX (Flagellar Motor Complex) (degree of match pw to cand: 0.308, degree of match cand to pw: 0.571, average score: 0.999)
  Genes in pathway or complex:
             0.9991 0.9972 EG11346 (fliE) EG11346-MONOMER (flagellar basal-body protein FliE)
             0.9992 0.9974 EG11347 (fliF) FLIF-FLAGELLAR-MS-RING (flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein)
             0.9997 0.9993 G365 (flgI) FLGI-FLAGELLAR-P-RING (flagellar P-ring protein FlgI)
   *in cand* 0.9998 0.9993 G363 (flgG) FLGG-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgG)
   *in cand* 0.9998 0.9993 G362 (flgF) FLGF-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgF)
   *in cand* 0.9998 0.9994 G359 (flgC) FLGC-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgC)
   *in cand* 0.9998 0.9995 G358 (flgB) FLGB-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgB)
             0.9979 0.9961 EG10602 (motB) MOTB-FLAGELLAR-MOTOR-STATOR-PROTEIN (MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall)
             0.9984 0.9965 EG10601 (motA) MOTA-FLAGELLAR-MOTOR-STATOR-PROTEIN (MotA protein, proton conductor component of motor; no effect on switching)
             0.9997 0.9993 G364 (flgH) FLGH-FLAGELLAR-L-RING (flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein)
             0.9992 0.9973 EG11654 (fliG) FLIG-FLAGELLAR-SWITCH-PROTEIN (flagellar motor switch protein FliG)
             0.9991 0.9972 EG10323 (fliM) FLIM-FLAGELLAR-C-RING-SWITCH (flagellar motor switch protein FliM)
             0.9991 0.9969 EG10324 (fliN) FLIN-FLAGELLAR-C-RING-SWITCH (flagellar motor switch protein FliN)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 G357 (flgA) G357-MONOMER (flagellar biosynthesis; assembly of basal-body periplasmic P ring)
   *in cand* 0.9998 0.9994 G360 (flgD) G360-MONOMER (flagellar biosynthesis, initiation of hook assembly)
   *in cand* 0.9998 0.9994 G361 (flgE) G361-MONOMER (flagellar hook protein FlgE)

- CPLX0-7452 (Flagellum) (degree of match pw to cand: 0.185, degree of match cand to pw: 0.714, average score: 0.998)
  Genes in pathway or complex:
             0.9987 0.9962 EG10841 (fliD) EG10841-MONOMER (flagellar cap protein FliD; filament capping protein; enables filament assembly)
             0.9987 0.9964 EG10321 (fliC) EG10321-MONOMER (flagellar biosynthesis; flagellin, filament structural protein)
             0.9995 0.9991 EG11545 (flgL) EG11545-MONOMER (flagellar biosynthesis; hook-filament junction protein)
             0.9996 0.9992 EG11967 (flgK) EG11967-MONOMER (flagellar biosynthesis, hook-filament junction protein 1)
   *in cand* 0.9998 0.9994 G361 (flgE) G361-MONOMER (flagellar hook protein FlgE)
             0.9991 0.9978 G370 (flhA) G370-MONOMER (flagellar biosynthesis protein FlhA)
             0.9993 0.9982 G7028 (flhB) G7028-MONOMER (flagellar biosynthesis protein FlhB)
             0.9649 0.9618 EG11224 (fliO) EG11224-MONOMER (flagellar biosynthesis protein FliO)
             0.9992 0.9971 EG11975 (fliP) EG11975-MONOMER (flagellar biosynthesis protein FliP)
             0.9988 0.9974 EG11976 (fliQ) EG11976-MONOMER (flagellar biosynthesis protein FliQ)
             0.9991 0.9971 EG11977 (fliR) EG11977-MONOMER (flagellar biosynthesis protein FliR)
             0.9986 0.9972 EG11656 (fliH) EG11656-MONOMER (flagellar biosynthesis protein FliH)
             0.9992 0.9974 G377 (fliI) G377-MONOMER (flagellum-specific ATP synthase FliI)
             0.9985 0.9974 G378 (fliJ) G378-MONOMER (flagellar biosynthesis protein FliJ)
             0.9991 0.9969 EG10324 (fliN) FLIN-FLAGELLAR-C-RING-SWITCH (flagellar motor switch protein FliN)
             0.9991 0.9972 EG10323 (fliM) FLIM-FLAGELLAR-C-RING-SWITCH (flagellar motor switch protein FliM)
             0.9992 0.9973 EG11654 (fliG) FLIG-FLAGELLAR-SWITCH-PROTEIN (flagellar motor switch protein FliG)
             0.9997 0.9993 G364 (flgH) FLGH-FLAGELLAR-L-RING (flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein)
             0.9984 0.9965 EG10601 (motA) MOTA-FLAGELLAR-MOTOR-STATOR-PROTEIN (MotA protein, proton conductor component of motor; no effect on switching)
             0.9979 0.9961 EG10602 (motB) MOTB-FLAGELLAR-MOTOR-STATOR-PROTEIN (MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall)
   *in cand* 0.9998 0.9995 G358 (flgB) FLGB-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgB)
   *in cand* 0.9998 0.9994 G359 (flgC) FLGC-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgC)
   *in cand* 0.9998 0.9993 G362 (flgF) FLGF-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgF)
   *in cand* 0.9998 0.9993 G363 (flgG) FLGG-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgG)
             0.9997 0.9993 G365 (flgI) FLGI-FLAGELLAR-P-RING (flagellar P-ring protein FlgI)
             0.9992 0.9974 EG11347 (fliF) FLIF-FLAGELLAR-MS-RING (flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein)
             0.9991 0.9972 EG11346 (fliE) EG11346-MONOMER (flagellar basal-body protein FliE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 G357 (flgA) G357-MONOMER (flagellar biosynthesis; assembly of basal-body periplasmic P ring)
   *in cand* 0.9998 0.9994 G360 (flgD) G360-MONOMER (flagellar biosynthesis, initiation of hook assembly)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G357 G358 G359 G360 G361 G362 G363 (centered at G360)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G363   G362   G361   G360   G359   G358   G357   
283/623231/623265/623252/623303/623274/62391/623
AAEO224324:0:Tyes000-240241-
AAVE397945:0:Tyes6543210
ABAC204669:0:Tyes1289128801910-
ABAU360910:0:Tyes6543210
ABUT367737:0:Tyes2323--019-
ACAU438753:0:Tyes01101823-
ACEL351607:0:Tyes10-10-0--
ACRY349163:8:Tyes---020272028-
ADEH290397:0:Tyes0036374546-
AEHR187272:0:Tyes8765430
AHYD196024:0:Tyes0123458
AMET293826:0:Tyes002297229923082309-
AORE350688:0:Tyes1143-121010-
ASAL382245:5:Tyes1089108831086108510840
ASP232721:2:Tyes543210-
ASP62928:0:Tyes0123456
BABO262698:0:Tno3387086510-
BAFZ390236:2:Fyes524-011011-
BAMB339670:3:Tno0123456
BAMB398577:3:Tno0123456
BAMY326423:0:Tyes11-11-10-
BANT260799:0:Tno--11-10-
BANT261594:2:Tno--9-10-
BANT568206:2:Tyes----01-
BANT592021:2:Tno--13-10-
BAPH198804:0:Tyes6543210
BBAC264462:0:Tyes0-0265026592660-
BBAC360095:0:Tyes2323502526-
BBRO257310:0:Tyes6543210
BBUR224326:21:Fno481-011011-
BCAN483179:0:Tno3396696110-
BCEN331271:2:Tno0123456
BCEN331272:3:Tyes0123456
BCER226900:1:Tyes--9-10-
BCER288681:0:Tno--10-10-
BCER315749:1:Tyes10---10-
BCER405917:1:Tyes--10-10-
BCER572264:1:Tno--10-10-
BCLA66692:0:Tyes0-011011-
BGAR290434:2:Fyes511512011011-
BHAL272558:0:Tyes0-021112-
BHER314723:0:Fyes500-011011-
BJAP224911:0:Fyes14141048104310640-
BLIC279010:0:Tyes11-111010-
BMAL243160:1:Tno7654320
BMAL320388:1:Tno7654320
BMAL320389:1:Tyes0123457
BMEL224914:0:Tno94594505947948-
BMEL359391:0:Tno3385585010-
BOVI236:0:Tyes33376610-
BPAR257311:0:Tno-543210
BPER257313:0:Tyes6543210
BPET94624:0:Tyes6543210
BPSE272560:1:Tyes6543210
BPSE320372:1:Tno6543210
BPSE320373:0:Tno-----0-
BPSE320373:1:Tno65432-0
BPUM315750:0:Tyes11---10-
BSP107806:2:Tyes6543210
BSP36773:2:Tyes0123456
BSP376:0:Tyes14014001130--
BSUB:0:Tyes11-111010-
BSUI204722:0:Tyes3394093510-
BSUI470137:0:Tno331142113710-
BTHA271848:1:Tno6543210
BTHU281309:1:Tno--10-10-
BTHU412694:1:Tno--10-10-
BTUR314724:0:Fyes496497011011-
BVIE269482:7:Tyes0123456
BWEI315730:4:Tyes--10-10-
CACE272562:1:Tyes0---2526-
CAULO:0:Tyes11841183-05554-
CBEI290402:0:Tyes---08--
CBOT36826:1:Tno0-17-27--
CBOT441770:0:Tyes0-16-26--
CBOT441771:0:Tno0-16-26--
CBOT441772:1:Tno0-17-26--
CBOT498213:1:Tno0-17-27--
CBOT508765:1:Tyes11---10-
CBOT515621:2:Tyes0---27--
CBOT536232:0:Tno0---27--
CCON360104:2:Tyes117611761975011411140-
CCUR360105:0:Tyes8158158013051304-
CDES477974:0:Tyes150--2526-
CDIF272563:1:Tyes10--910-
CFET360106:0:Tyes50350317120671672-
CHYD246194:0:Tyes11-11-10-
CJAP155077:0:Tyes012345-
CJEJ192222:0:Tyes6206206200458459-
CJEJ195099:0:Tno73473417980578579-
CJEJ354242:2:Tyes6166166160453454-
CJEJ360109:0:Tyes117011701170012631262-
CJEJ407148:0:Tno6336336330453454-
CKLU431943:1:Tyes----0--
CNOV386415:0:Tyes28---10-
CPHY357809:0:Tyes0---24542455-
CPSY167879:0:Tyes9896540
CSAL290398:0:Tyes0123456
CSP501479:7:Fyes0--144--
CSP78:2:Tyes4274284270363362-
CTET212717:0:Tyes0---910-
CVIO243365:0:Tyes192773919291930193119320
DARO159087:0:Tyes6543215370
DDES207559:0:Tyes29082909014325758-
DHAF138119:0:Tyes-0-4301-
DPSY177439:2:Tyes2828111010-
DRED349161:0:Tyes0---1011-
DSHI398580:5:Tyes55-11910-
DVUL882:1:Tyes2052040113289-
ECAR218491:0:Tyes6543210
ECOL199310:0:Tno6543210
ECOL316407:0:Tno6543210
ECOL331111:6:Tno6543210
ECOL362663:0:Tno6543210
ECOL364106:1:Tno6543210
ECOL405955:2:Tyes6543210
ECOL409438:6:Tyes6543210
ECOL413997:0:Tno6543210
ECOL439855:4:Tno0123457
ECOL469008:0:Tno0123456
ECOL481805:0:Tno0123456
ECOL585034:0:Tno5453210
ECOL585035:0:Tno6543210
ECOL585055:0:Tno6543210
ECOL585056:2:Tno6543210
ECOL585057:0:Tno0123456
ECOL585397:0:Tno6543210
ECOL83334:0:Tno6543210
ECOLI:0:Tno6543210
ECOO157:0:Tno6543210
EFER585054:1:Tyes0123456
ESP42895:1:Tyes6543210
FNOD381764:0:Tyes0-0629802801-
GKAU235909:1:Tyes11-11-10-
GMET269799:1:Tyes102679268126902691-
GOXY290633:5:Tyes526-600010911092-
GSUL243231:0:Tyes26322633121010-
GTHE420246:1:Tyes111111-10-
GURA351605:0:Tyes010100109110-
HACI382638:1:Tyes0-908-13061307-
HARS204773:0:Tyes0123456
HCHE349521:0:Tyes012345-
HHAL349124:0:Tyes012345-
HHEP235279:0:Tyes0-627-329328-
HMOD498761:0:Tyes011367-13561355-
HNEP81032:0:Tyes10151514-
HPY:0:Tno727-0-700701-
HPYL357544:1:Tyes702-0-676677-
HPYL85963:0:Tno683-0-657658-
ILOI283942:0:Tyes012345-
JSP290400:1:Tyes0--1445-
JSP375286:0:Tyes6543210
KRAD266940:2:Fyes--011011-
LBIF355278:2:Tyes744-417-01-
LBIF456481:2:Tno768-429-01-
LBOR355276:1:Tyes690-690-01-
LBOR355277:1:Tno0-0-852851-
LCHO395495:0:Tyes012345-
LINN272626:1:Tno--101514-
LINT189518:1:Tyes2339-2521-01-
LINT267671:1:Tno1014-881-01-
LINT363253:3:Tyes17517401293294-
LMON169963:0:Tno--101514-
LMON265669:0:Tyes--101514-
LPNE272624:0:Tno543210-
LPNE297245:1:Fno543210-
LPNE297246:1:Fyes543210-
LPNE400673:0:Tno543210-
LSPH444177:1:Tyes12--1010-
LWEL386043:0:Tyes--101514-
LXYL281090:0:Tyes8-8-0--
MAQU351348:2:Tyes543210-
MEXT419610:0:Tyes2445244663348310-
MFLA265072:0:Tyes6543210
MLOT266835:2:Tyes2218230--
MMAG342108:0:Tyes29902991-0110109-
MMAR394221:0:Tyes12571256-012471248-
MPET420662:1:Tyes0123456
MSP266779:3:Tyes21215023--
MSP400668:0:Tyes012345-
MSP409:2:Tyes4964972750141001444495
MTHE264732:0:Tyes11-11910-
NEUR228410:0:Tyes6543210
NEUT335283:2:Tyes6543210
NHAM323097:2:Tyes6296295790639--
NMUL323848:3:Tyes8765430
NOCE323261:1:Tyes012345-
NSP35761:1:Tyes0-0-10--
NSP387092:0:Tyes00--1211-
NWIN323098:0:Tyes5205204980532--
OANT439375:4:Tyes2121502324-
OCAR504832:0:Tyes177178-0187--
OIHE221109:0:Tyes-1417121010-
PAER208963:0:Tyes012345-
PAER208964:0:Tno543210-
PATL342610:0:Tyes012345-
PCAR338963:0:Tyes0026283738-
PENT384676:0:Tyes013456-
PFLU205922:0:Tyes102779278027812782-
PFLU216595:1:Tyes01261262263264-
PFLU220664:0:Tyes102824282528262827-
PHAL326442:1:Tyes543210-
PING357804:0:Tyes012345-
PLUM243265:0:Fyes6543210
PMEN399739:0:Tyes012345-
PMOB403833:0:Tyes2272271015671566-
PPRO298386:2:Tyes87310870869868865
PPUT160488:0:Tno013456-
PPUT351746:0:Tyes653210-
PPUT76869:0:Tno013456-
PSP117:0:Tyes2584-278427850--
PSTU379731:0:Tyes543210-
PSYR205918:0:Tyes012456-
PSYR223283:2:Tyes764210-
PTHE370438:0:Tyes13013152425-
RDEN375451:4:Tyes8887-084--
RETL347834:5:Tyes22-250--
REUT264198:2:Tyes6543210
REUT381666:1:Tyes6543210
RFER338969:1:Tyes543210-
RLEG216596:6:Tyes222250--
RMET266264:1:Tyes6543210
RPAL258594:0:Tyes32733273103260--
RPAL316055:0:Tyes7537533900374373-
RPAL316056:0:Tyes63363310220219-
RPAL316057:0:Tyes01-23021110-
RPAL316058:0:Tyes303830381030273028-
RPOM246200:1:Tyes0--32144--
RRUB269796:1:Tyes228922881981022712272-
RSOL267608:0:Tyes6543210
RSPH272943:4:Tyes012345-
RSPH349101:2:Tno012345-
RSPH349102:5:Tyes012345-
SACI56780:0:Tyes38738636636510-
SALA317655:1:Tyes43-10--
SBAL399599:3:Tyes01-345-
SBAL402882:1:Tno01-345-
SBOY300268:1:Tyes0123456
SDEG203122:0:Tyes010345-
SDEN318161:0:Tyes542401240210-
SDYS300267:1:Tyes0-01235
SENT209261:0:Tno0123456
SENT220341:0:Tno6543210
SENT295319:0:Tno0123456
SENT321314:2:Tno6543210
SENT454169:2:Tno6543210
SFLE198214:0:Tyes3322-10
SFLE373384:0:Tno5432-10
SGLO343509:3:Tyes6542086220870
SHAL458817:0:Tyes542915210-
SHIGELLA:0:Tno4432-10
SLAC55218:1:Fyes0---4--
SLOI323850:0:Tyes54-210-
SMED366394:3:Tyes2220250--
SMEL266834:2:Tyes2219240--
SONE211586:1:Tyes01-456-
SPEA398579:0:Tno132313220132013191318-
SPRO399741:1:Tyes0123456
SRUB309807:1:Tyes36370213--
SSED425104:0:Tyes312631270312931303131-
SSON300269:1:Tyes4543210
SSP292414:2:Tyes212203925--
SSP644076:6:Fyes202103424--
SSP94122:1:Tyes54-210-
STHE292459:0:Tyes--0-1011-
STYP99287:1:Tyes6543210
SWOL335541:0:Tyes979711-10-
TCRU317025:0:Tyes01-345-
TDEN243275:0:Tyes0-01752204203-
TDEN292415:0:Tyes012345-
TDEN326298:0:Tyes1105110520350351-
TLET416591:0:Tyes296-1766176510-
TMAR243274:0:Tyes8478478470675674-
TPAL243276:0:Tyes557-55732710-
TPET390874:0:Tno101310131013011851186-
TPSE340099:0:Tyes813813021112-
TROS309801:0:Tyes5980598599609601-
TSP1755:0:Tyes001537153915481549-
TSP28240:0:Tyes964964964012341235-
TTEN273068:0:Tyes101202120412131214-
TTUR377629:0:Tyes9865430
VCHO:0:Tyes010345-
VCHO345073:1:Tno010345-
VEIS391735:1:Tyes0123456
VFIS312309:2:Tyes010345-
VPAR223926:0:Tyes--0----
VPAR223926:1:Tyes65-210-
VVUL196600:2:Tyes54-210-
VVUL216895:1:Tno01-345-
WSUC273121:0:Tyes12412485-01-
XAXO190486:0:Tyes012345-
XCAM190485:0:Tyes012345-
XCAM314565:0:Tno543210-
XCAM316273:0:Tno012345-
XCAM487884:0:Tno012345-
XORY291331:0:Tno653210-
XORY342109:0:Tyes543210-
XORY360094:0:Tno12106420-
YENT393305:1:Tyes0123456
YPES187410:5:Tno0123456
YPES214092:3:Tno6543210
YPES349746:2:Tno6543210
YPES360102:3:Tyes6543210
YPES377628:2:Tno0123456
YPES386656:2:Tno0123456
YPSE273123:2:Tno6543210
YPSE349747:2:Tno0123456
ZMOB264203:0:Tyes012345-



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