CANDIDATE ID: 91

CANDIDATE ID: 91

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9974019e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.4285714e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7421 (ygbN) (b2740)
   Products of gene:
     - B2740-MONOMER (YgbN Gnt transporter)

- EG12631 (gntU) (b3435 (obsolete))
   Products of gene:
     - GNTU-MONOMER (GntU gluconate Gnt transporter)
       Reactions:
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]

- EG12629 (gntK) (b3437)
   Products of gene:
     - GLUCONOKINII-MONOMER (GntK)
     - GLUCONOKINII-CPLX (D-gluconate kinase, thermostable)
       Reactions:
        ATP + D-gluconate  ->  ADP + 6-phospho-D-gluconate + 2 H+
         In pathways
         KETOGLUCONMET-PWY (ketogluconate metabolism)
         PWY-5530 (PWY-5530)
         IDNCAT-PWY (L-idonate degradation)
         GLUCONSUPER-PWY (D-gluconate degradation)

- EG12563 (gntP) (b4321)
   Products of gene:
     - GNTP-MONOMER (GntP Gluconate Gnt transporter)
       Reactions:
        D-fructuronate[periplasmic space] + H+[periplasmic space]  ->  D-fructuronate[cytosol] + H+[cytosol]
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]

- EG12548 (yjhF) (b4296)
   Products of gene:
     - YJHF-MONOMER (YjhF Gnt tranporter)

- EG12539 (idnT) (b4265)
   Products of gene:
     - YJGT-MONOMER (L-idonate / 5-ketogluconate / gluconate transporter)
       Reactions:
        5-dehydro-D-gluconate[periplasmic space] + H+[periplasmic space]  ->  5-dehydro-D-gluconate[cytosol] + H+[cytosol]
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]
        L-idonate[periplasmic space] + H+[periplasmic space]  ->  L-idonate[cytosol] + H+[cytosol]

- EG12380 (gntT) (b3415)
   Products of gene:
     - GNTT-MONOMER (GntT Gluconate Gnt transporter)
       Reactions:
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 194
Effective number of orgs (counting one per cluster within 468 clusters): 119

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM47
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XAUT78245 ncbi Xanthobacter autotrophicus Py27
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0167
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
STHE292459 ncbi Symbiobacterium thermophilum IAM 148636
SSON300269 ncbi Shigella sonnei Ss0467
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153056
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14356
SGLO343509 ncbi Sodalis glossinidius morsitans7
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23387
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122286
SEPI176279 ncbi Staphylococcus epidermidis RP62A6
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SDYS300267 ncbi Shigella dysenteriae Sd1977
SDEG203122 ncbi Saccharophagus degradans 2-407
SCO ncbi Streptomyces coelicolor A3(2)7
SBOY300268 ncbi Shigella boydii Sb2277
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
SAVE227882 ncbi Streptomyces avermitilis MA-46807
SAUR93062 ncbi Staphylococcus aureus aureus COL6
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83256
SAUR426430 ncbi Staphylococcus aureus aureus Newman6
SAUR418127 ncbi Staphylococcus aureus aureus Mu36
SAUR367830 Staphylococcus aureus aureus USA3006
SAUR359787 ncbi Staphylococcus aureus aureus JH16
SAUR359786 ncbi Staphylococcus aureus aureus JH96
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4766
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2526
SAUR273036 ncbi Staphylococcus aureus RF1226
SAUR196620 ncbi Staphylococcus aureus aureus MW26
SAUR158879 ncbi Staphylococcus aureus aureus N3156
SAUR158878 ncbi Staphylococcus aureus aureus Mu506
RSP101510 ncbi Rhodococcus jostii RHA17
RSOL267608 ncbi Ralstonia solanacearum GMI10007
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332097
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RMET266264 ncbi Ralstonia metallidurans CH347
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30007
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PPUT76869 ncbi Pseudomonas putida GB-17
PPUT351746 ncbi Pseudomonas putida F17
PPUT160488 ncbi Pseudomonas putida KT24407
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257456
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMOB403833 ncbi Petrotoga mobilis SJ956
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-17
PENT384676 ncbi Pseudomonas entomophila L487
PDIS435591 ncbi Parabacteroides distasonis ATCC 85036
PATL342610 ncbi Pseudoalteromonas atlantica T6c7
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
PACN267747 ncbi Propionibacterium acnes KPA1712027
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
OANT439375 ncbi Ochrobactrum anthropi ATCC 491887
NMEN374833 ncbi Neisseria meningitidis 0534427
NMEN272831 ncbi Neisseria meningitidis FAM187
NMEN122587 ncbi Neisseria meningitidis Z24917
NMEN122586 ncbi Neisseria meningitidis MC587
NGON242231 ncbi Neisseria gonorrhoeae FA 10907
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-16
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E7
MSP164757 ncbi Mycobacterium sp. JLS6
MSME246196 ncbi Mycobacterium smegmatis MC2 1557
MMAR394221 ncbi Maricaulis maris MCS107
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK7
MABS561007 ncbi Mycobacterium abscessus ATCC 199777
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LSAK314315 ncbi Lactobacillus sakei sakei 23K6
LPLA220668 ncbi Lactobacillus plantarum WCFS16
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82936
LCAS321967 ncbi Lactobacillus casei ATCC 3346
LBRE387344 ncbi Lactobacillus brevis ATCC 3676
KRAD266940 ncbi Kineococcus radiotolerans SRS302167
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HINF71421 ncbi Haemophilus influenzae Rd KW206
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-26
GOXY290633 ncbi Gluconobacter oxydans 621H7
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255866
FJOH376686 ncbi Flavobacterium johnsoniae UW1016
ESP42895 Enterobacter sp.7
EFER585054 ncbi Escherichia fergusonii ATCC 354697
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a7
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A7
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CPHY357809 ncbi Clostridium phytofermentans ISDg6
CNOV386415 ncbi Clostridium novyi NT6
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3827
CMIC31964 ncbi Clavibacter michiganensis sepedonicus7
CJAP155077 Cellvibrio japonicus7
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334066
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130327
CEFF196164 ncbi Corynebacterium efficiens YS-3147
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131297
CDIF272563 ncbi Clostridium difficile 6306
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto6
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6576
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B6
CBOT498213 ncbi Clostridium botulinum B1 str. Okra6
CBOT441772 ncbi Clostridium botulinum F str. Langeland6
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193976
CBOT36826 Clostridium botulinum A6
CACE272562 ncbi Clostridium acetobutylicum ATCC 8246
BXEN266265 ncbi Burkholderia xenovorans LB4006
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHA271848 ncbi Burkholderia thailandensis E2647
BSUB ncbi Bacillus subtilis subtilis 1686
BSP36773 Burkholderia sp.7
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPSE320373 ncbi Burkholderia pseudomallei 6687
BPSE320372 ncbi Burkholderia pseudomallei 1710b7
BPSE272560 ncbi Burkholderia pseudomallei K962437
BMAL320389 ncbi Burkholderia mallei NCTC 102477
BMAL320388 ncbi Burkholderia mallei SAVP17
BMAL243160 ncbi Burkholderia mallei ATCC 233447
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K166
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-986
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
ASP62977 ncbi Acinetobacter sp. ADP17
ASP1667 Arthrobacter sp.7
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AORE350688 ncbi Alkaliphilus oremlandii OhILAs6
AHYD196024 Aeromonas hydrophila dhakensis7
AAUR290340 ncbi Arthrobacter aurescens TC17


Names of the homologs of the genes in the group in each of these orgs
  G7421   EG12631   EG12629   EG12563   EG12548   EG12539   EG12380   
ZMOB264203 ZMO1756ZMO1756ZMO1757ZMO1756ZMO1756ZMO1756ZMO1756
YPSE349747 YPSIP31758_4021YPSIP31758_4021YPSIP31758_4020YPSIP31758_0693YPSIP31758_4021YPSIP31758_4021YPSIP31758_4021
YPSE273123 YPTB3797YPTB3797YPTB3796YPTB3287YPTB3797YPTB3797YPTB3797
YPES386656 YPDSF_3319YPDSF_3319YPDSF_3318YPDSF_3319YPDSF_3319YPDSF_3319YPDSF_3319
YPES377628 YPN_3603YPN_3603YPN_3602YPN_3207YPN_3603YPN_3603YPN_3603
YPES360102 YPA_3783YPA_3783YPA_3782YPA_3383YPA_3783YPA_3783YPA_3783
YPES349746 YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4107YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4105
YPES214092 YPO3954YPO3954YPO3953YPO0767YPO3954YPO3954YPO3954
YPES187410 Y3875Y3875Y3876Y3426Y3875Y3875Y3875
YENT393305 YE4021YE4021YE4020YE1023YE4021YE4021YE4021
XAUT78245 XAUT_1234XAUT_1234XAUT_1235XAUT_1234XAUT_1234XAUT_1234XAUT_1234
VVUL216895 VV1_1101VV1_1101VV1_1100VV1_1101VV1_1101VV1_1101VV1_1101
VVUL196600 VV0061VV0061VV0060VV0061VV0061VV0061VV0061
VPAR223926 VP0064VP0064VP0063VP0064VP0064VP0064VP0064
VCHO345073 VC0395_A2664VC0395_A2664VC0395_A2665VC0395_A2664VC0395_A2664VC0395_A2664VC0395_A2664
VCHO VC0286VC0286VC0287VC0286VC0286VC0286VC0286
STYP99287 STM3541STM3541STM3542STM3512STM4482STM4482STM3512
STHE292459 STH2301STH2301STH2301STH2301STH2301STH2301
SSON300269 SSO_2888SSO_3678SSO_3679SSO_3547SSO_4450SSO_4450SSO_3547
SSAP342451 SSP0412SSP0412SSP0412SSP0412SSP0412SSP0412
SPRO399741 SPRO_1488SPRO_4498SPRO_4497SPRO_4651SPRO_4651SPRO_4651SPRO_4651
SPEA398579 SPEA_3450SPEA_3450SPEA_3450SPEA_3450SPEA_3450SPEA_3450
SHIGELLA GNTTGNTUGNTKGNTPGNTTGNTTGNTT
SHAL458817 SHAL_3562SHAL_3562SHAL_3562SHAL_3562SHAL_3562SHAL_3562
SHAE279808 SH0576SH0576SH0576SH0576SH0576SH0576
SGLO343509 SG2332SG2332SG2151SG2332SG2332SG2332SG2332
SFLE373384 SFV_3423SFV_3423SFV_3445SFV_4205SFV_3423SFV_3423SFV_3423
SFLE198214 AAN44918.1AAN44918.1AAN44919.1AAN45620.1AAN44899.1AAN44899.1AAN44899.1
SERY405948 SACE_5302SACE_5302SACE_3356SACE_3358SACE_5302SACE_5302SACE_5302
SEPI176280 SE_2044SE_2044SE_2044SE_2044SE_2044SE_2044
SEPI176279 SERP2057SERP2057SERP2057SERP2057SERP2057SERP2057
SENT454169 SEHA_C3850SEHA_C3850SEHA_C3851SEHA_C3820SEHA_C4886SEHA_C4886SEHA_C3820
SENT321314 SCH_3471SCH_3471SCH_3472SCH_3444SCH_4338SCH_4338SCH_3444
SENT295319 SPA3392SPA3392SPA3393SPA3377SPA4282SPA4282SPA3377
SENT220341 STY4270STY4270STY4269STY4284STY4284STY4284STY4284
SENT209261 T3979T3979T3980T3994T3994T3994T3994
SDYS300267 SDY_3587SDY_3587SDY_3588SDY_3661SDY_3661SDY_3661SDY_3661
SDEG203122 SDE_1892SDE_1892SDE_0904SDE_1892SDE_1892SDE_1892SDE_1892
SCO SCO4991SCO4991SCO1679SCO4991SCO4991SCO4991SCO4991
SBOY300268 SBO_2780SBO_3433SBO_3434SBO_3404SBO_3404SBO_3404SBO_3404
SBAL402882 SHEW185_4057SHEW185_4057SHEW185_4056SHEW185_4057SHEW185_4057SHEW185_4057SHEW185_4057
SBAL399599 SBAL195_4175SBAL195_4175SBAL195_4174SBAL195_4175SBAL195_4175SBAL195_4175SBAL195_4175
SAVE227882 SAV3277SAV6628SAV6629SAV6628SAV6628SAV6628SAV6628
SAUR93062 SACOL2514SACOL2514SACOL2514SACOL2514SACOL2514SACOL2514
SAUR93061 SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806
SAUR426430 NWMN_2401NWMN_2401NWMN_2401NWMN_2401NWMN_2401NWMN_2401
SAUR418127 SAHV_2489SAHV_2489SAHV_2489SAHV_2489SAHV_2489SAHV_2489
SAUR367830 SAUSA300_2442SAUSA300_2442SAUSA300_2442SAUSA300_2442SAUSA300_2442SAUSA300_2442
SAUR359787 SAURJH1_2580SAURJH1_2580SAURJH1_2580SAURJH1_2580SAURJH1_2580SAURJH1_2580
SAUR359786 SAURJH9_2528SAURJH9_2528SAURJH9_2528SAURJH9_2528SAURJH9_2528SAURJH9_2528
SAUR282459 SAS2390SAS2390SAS2390SAS2390SAS2390SAS2390
SAUR282458 SAR2582SAR2582SAR2582SAR2582SAR2582SAR2582
SAUR273036 SAB2377CSAB2377CSAB2377CSAB2377CSAB2377CSAB2377C
SAUR196620 MW2423MW2423MW2423MW2423MW2423MW2423
SAUR158879 SA2293SA2293SA2293SA2293SA2293SA2293
SAUR158878 SAV2505SAV2505SAV2505SAV2505SAV2505SAV2505
RSP101510 RHA1_RO02465RHA1_RO02465RHA1_RO03300RHA1_RO02363RHA1_RO02363RHA1_RO02363RHA1_RO02363
RSOL267608 RSP1189RSP1189RSC0441RSP1189RSP1189RSP1189RSP1189
RSAL288705 RSAL33209_0835RSAL33209_2176RSAL33209_2015RSAL33209_2014RSAL33209_2014RSAL33209_2014RSAL33209_2014
RRUB269796 RRU_A3140RRU_A3140RRU_A3140RRU_A3140RRU_A3140RRU_A3140
RMET266264 RMET_4774RMET_4774RMET_1046RMET_4774RMET_4774RMET_4774RMET_4774
REUT381666 H16_A3011H16_B1207H16_A1179H16_B1207H16_B1207H16_B1207H16_B1207
REUT264198 REUT_B4018REUT_B4018REUT_A1082REUT_B4018REUT_B4018REUT_B4018REUT_B4018
PSYR223283 PSPTO_3565PSPTO_3565PSPTO_3564PSPTO_3565PSPTO_3565PSPTO_3565PSPTO_3565
PSYR205918 PSYR_3338PSYR_3338PSYR_3337PSYR_3338PSYR_3338PSYR_3338PSYR_3338
PPUT76869 PPUTGB1_2523PPUTGB1_2523PPUTGB1_2524PPUTGB1_2523PPUTGB1_2523PPUTGB1_2523PPUTGB1_2523
PPUT351746 PPUT_2345PPUT_2345PPUT_2346PPUT_2345PPUT_2345PPUT_2345PPUT_2345
PPUT160488 PP_3417PP_3417PP_3416PP_3417PP_3417PP_3417PP_3417
PPEN278197 PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360
PMUL272843 PM0793PM0793PM0792PM0793PM0793PM0793PM0793
PMOB403833 PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535
PLUM243265 PLU0498PLU0498PLU0497PLU1969PLU1969PLU0498PLU1969
PHAL326442 PSHAB0479PSHAB0479PSHAB0480PSHAB0479PSHAB0479PSHAB0479PSHAB0479
PFLU220664 PFL_3343PFL_4579PFL_4580PFL_4579PFL_4579PFL_4579PFL_4579
PFLU216595 PFLU2355PFLU4810PFLU4811PFLU4810PFLU4810PFLU4810PFLU4810
PFLU205922 PFL_4335PFL_4335PFL_4336PFL_4335PFL_4335PFL_4335PFL_4335
PENT384676 PSEEN2420PSEEN2420PSEEN2421PSEEN2420PSEEN2420PSEEN2420PSEEN2420
PDIS435591 BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331
PATL342610 PATL_2267PATL_2267PATL_3644PATL_2267PATL_2267PATL_2267PATL_2267
PAER208964 PA2322PA2322PA2321PA2322PA2322PA2322PA2322
PAER208963 PA14_34630PA14_34630PA14_34640PA14_34630PA14_34630PA14_34630PA14_34630
PACN267747 PPA0738PPA0738PPA0739PPA0738PPA0738PPA0738PPA0738
OIHE221109 OB2216OB2216OB3188OB3188OB3188OB3188
OANT439375 OANT_4271OANT_4271OANT_3755OANT_4271OANT_4271OANT_4271OANT_4271
NMEN374833 NMCC_0172NMCC_0172NMCC_0171NMCC_0172NMCC_0172NMCC_0172NMCC_0172
NMEN272831 NMC2006NMC2006NMC2007NMC2006NMC2006NMC2006NMC2006
NMEN122587 NMA0413NMA0413NMA0412NMA0413NMA0413NMA0413NMA0413
NMEN122586 NMB_2027NMB_2027NMB_2028NMB_2027NMB_2027NMB_2027NMB_2027
NGON242231 NGO2077NGO2077NGO2076NGO2077NGO2077NGO2077NGO2077
MVAN350058 MVAN_5912MVAN_5912MVAN_5911MVAN_5912MVAN_5912MVAN_5912
MTHE264732 MOTH_0728MOTH_0728MOTH_0728MOTH_0728MOTH_0728MOTH_0728
MSUC221988 MS1977MS1977MS0957MS0335MS0688MS1977MS1977
MSP164757 MJLS_5708MJLS_5708MJLS_5707MJLS_5708MJLS_5708MJLS_5708
MSME246196 MSMEG_3789MSMEG_3789MSMEG_0453MSMEG_0452MSMEG_3789MSMEG_3789MSMEG_3789
MMAR394221 MMAR10_2727MMAR10_2727MMAR10_2730MMAR10_2727MMAR10_2727MMAR10_2727MMAR10_2727
MGIL350054 MFLV_0503MFLV_0503MFLV_0502MFLV_0503MFLV_0503MFLV_0503MFLV_0503
MABS561007 MAB_3634CMAB_3634CMAB_3635CMAB_3634CMAB_3634CMAB_3634CMAB_3634C
LSPH444177 BSPH_4719BSPH_4719BSPH_4719BSPH_4719BSPH_4719BSPH_4719
LSAK314315 LSA0299LSA0299LSA0299LSA0299LSA0299LSA0299
LPLA220668 LP_1249LP_1249LP_1249LP_1249LP_1249LP_1249
LMES203120 LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923
LCAS321967 LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229
LBRE387344 LVIS_1586LVIS_1576LVIS_1586LVIS_1586LVIS_1586LVIS_1586
KRAD266940 KRAD_3894KRAD_3894KRAD_0597KRAD_3894KRAD_3894KRAD_3894KRAD_3894
KPNE272620 GKPORF_B0660GKPORF_B3144GKPORF_B3145GKPORF_B3127GKPORF_B3127GKPORF_B3127GKPORF_B3127
HSOM228400 HSM_0701HSM_0701HSM_0704HSM_0701HSM_0701HSM_0701HSM_0701
HSOM205914 HS_0378HS_0378HS_0379HS_0378HS_1717HS_1717HS_1717
HMOD498761 HM1_2671HM1_2671HM1_2671HM1_2671HM1_2671HM1_2671
HINF71421 HI_1015HI_1015HI_1015HI_1015HI_1015HI_1015
GTHE420246 GTNG_1835GTNG_1835GTNG_1835GTNG_1835GTNG_1835GTNG_1835
GOXY290633 GOX2188GOX2188GOX1709GOX2188GOX2188GOX2188GOX2188
FNUC190304 FN0225FN0225FN0225FN0225FN0225FN0225
FJOH376686 FJOH_0667FJOH_0667FJOH_0667FJOH_0667FJOH_0667FJOH_0667
ESP42895 ENT638_3844ENT638_3844ENT638_3845ENT638_3828ENT638_3828ENT638_3828ENT638_3828
EFER585054 EFER_3412EFER_3412EFER_3413EFER_3384EFER_3384EFER_3384EFER_3384
ECOO157 GNTUGNTUGNTKGNTPGNTTGNTTGNTT
ECOL83334 ECS4285ECS4285ECS4286ECS5280ECS4257ECS4257ECS4257
ECOL585397 ECED1_3193ECED1_4110ECED1_4111ECED1_4076ECED1_4076ECED1_4076ECED1_4076
ECOL585057 ECIAI39_3918ECIAI39_3918ECIAI39_3919ECIAI39_4794ECIAI39_4738ECIAI39_4738ECIAI39_3896
ECOL585056 ECUMN_3899ECUMN_3899ECUMN_3900ECUMN_4928ECUMN_4895ECUMN_4797ECUMN_3874
ECOL585055 EC55989_3007EC55989_3845EC55989_3846EC55989_4985EC55989_4823EC55989_4823EC55989_3823
ECOL585035 ECS88_3007ECS88_3833ECS88_3834ECS88_4939ECS88_4907ECS88_3804ECS88_3804
ECOL585034 ECIAI1_2835ECIAI1_3581ECIAI1_3582ECIAI1_4537ECIAI1_3559ECIAI1_3559ECIAI1_3559
ECOL481805 ECOLC_0972ECOLC_0277ECOLC_0276ECOLC_0298ECOLC_0298ECOLC_0298ECOLC_0298
ECOL469008 ECBD_0984ECBD_0307ECBD_0306ECBD_3714ECBD_0330ECBD_3771ECBD_0330
ECOL439855 ECSMS35_3719ECSMS35_3719ECSMS35_3720ECSMS35_4848ECSMS35_4746ECSMS35_4746ECSMS35_3696
ECOL413997 ECB_02590ECB_03287ECB_03288ECB_04190ECB_04131ECB_04131ECB_03267
ECOL409438 ECSE_2988ECSE_3704ECSE_3705ECSE_4594ECSE_3682ECSE_3682ECSE_3682
ECOL405955 APECO1_37842APECO1_3022APECO1_3021APECO1_3051APECO1_2129APECO1_2129APECO1_3051
ECOL364106 UTI89_C3106UTI89_C3944UTI89_C3945UTI89_C3916UTI89_C4872UTI89_C4872UTI89_C3916
ECOL362663 ECP_2719ECP_3531ECP_3532ECP_3501ECP_4514ECP_4514ECP_3501
ECOL331111 ECE24377A_3037ECE24377A_3914ECE24377A_3915ECE24377A_4919ECE24377A_3891ECE24377A_3891ECE24377A_3891
ECOL316407 ECK2735:JW2710:B2740ECK3421:JW5686:B4476ECK3422:JW3400:B3437ECK4312:JW4284:B4321ECK4285:JW4258:B4296ECK4258:JW4222:B4265ECK3402:JW5690:B3415
ECOL199310 C3301C4224C4225C5401C5366C5366C4192
ECAR218491 ECA4331ECA1840ECA1839ECA1840ECA1840ECA1840ECA1840
CSAL290398 CSAL_0925CSAL_0925CSAL_0926CSAL_0925CSAL_0925CSAL_0925CSAL_0925
CPHY357809 CPHY_3831CPHY_3831CPHY_3831CPHY_3831CPHY_3831CPHY_3831
CNOV386415 NT01CX_0634NT01CX_0634NT01CX_0634NT01CX_0634NT01CX_0634NT01CX_0634
CMIC443906 CMM_2908CMM_2908CMM_2271CMM_2908CMM_2908CMM_2908CMM_2908
CMIC31964 CMS3035CMS3035CMS2465CMS3035CMS3035CMS3035CMS3035
CJAP155077 CJA_0346CJA_0346CJA_0846CJA_0346CJA_0346CJA_0346CJA_0346
CHUT269798 CHU_1403CHU_1404CHU_1403CHU_1403CHU_1403CHU_1403
CGLU196627 CG3216CG3216CG2732CG3216CG3216CG3216CG3216
CEFF196164 CE0611CE0611CE2384CE0611CE0611CE0611CE0611
CDIP257309 DIP2078DIP0253DIP0254DIP0253DIP0253DIP0253DIP0253
CDIF272563 CD2812CD2812CD2812CD2812CD2812CD2812
CBOT536232 CLM_2408CLM_2408CLM_2408CLM_2408CLM_2408CLM_2408
CBOT515621 CLJ_B2415CLJ_B2415CLJ_B2415CLJ_B2415CLJ_B2415CLJ_B2415
CBOT508765 CLL_A1311CLL_A1311CLL_A1311CLL_A1311CLL_A1311CLL_A1311
CBOT498213 CLD_2371CLD_2371CLD_2371CLD_2371CLD_2371CLD_2371
CBOT441772 CLI_2253CLI_2253CLI_2253CLI_2253CLI_2253CLI_2253
CBOT441770 CLB_2146CLB_2146CLB_2146CLB_2146CLB_2146CLB_2146
CBOT36826 CBO2207CBO2207CBO2207CBO2207CBO2207CBO2207
CACE272562 CAC3605CAC3605CAC3605CAC3605CAC3605CAC3605
BXEN266265 BXE_B3032BXE_B3032BXE_B3032BXE_B3032BXE_B3032BXE_B3032
BWEI315730 BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094
BVIE269482 BCEP1808_0630BCEP1808_0630BCEP1808_0631BCEP1808_0630BCEP1808_0630BCEP1808_0630BCEP1808_0630
BTHU412694 BALH_0161BALH_0161BALH_0161BALH_0161BALH_0161BALH_0161
BTHU281309 BT9727_0158BT9727_0158BT9727_0158BT9727_0158BT9727_0158BT9727_0158
BTHA271848 BTH_I1219BTH_I1219BTH_I1220BTH_I1219BTH_I1219BTH_I1219BTH_I1219
BSUB BSU19520BSU40070BSU19520BSU40070BSU40070BSU40070
BSP36773 BCEP18194_A3748BCEP18194_A3748BCEP18194_A3749BCEP18194_A3748BCEP18194_A3748BCEP18194_A3748BCEP18194_A3748
BPUM315750 BPUM_3601BPUM_3601BPUM_3561BPUM_3561BPUM_3561BPUM_3561
BPSE320373 BURPS668_3404BURPS668_3404BURPS668_3403BURPS668_3404BURPS668_3404BURPS668_3404BURPS668_3404
BPSE320372 BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3716BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3717
BPSE272560 BPSL2930BPSL2930BPSL2929BPSL2930BPSL2930BPSL2930BPSL2930
BMAL320389 BMA10247_2629BMA10247_2629BMA10247_2628BMA10247_2629BMA10247_2629BMA10247_2629BMA10247_2629
BMAL320388 BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0359BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0360
BMAL243160 BMA_2444BMA_2444BMA_2443BMA_2444BMA_2444BMA_2444BMA_2444
BLIC279010 BL00197BL00197BL00197BL00197BL00197BL00197
BHAL272558 BH0805BH0805BH0805BH0805BH0805BH0805
BCLA66692 ABC1109ABC1109ABC1109ABC1109ABC1109ABC1109
BCER572264 BCA_0206BCA_0206BCA_0206BCA_0206BCA_0206BCA_0206
BCER405917 BCE_2303BCE_2303BCE_2303BCE_2303BCE_2303BCE_2303
BCER315749 BCER98_1664BCER98_1664BCER98_1664BCER98_1664BCER98_1664BCER98_1664
BCER288681 BCE33L0156BCE33L0156BCE33L0156BCE33L0156BCE33L0156BCE33L0156
BCER226900 BC_2224BC_2224BC_2224BC_2224BC_2224BC_2224
BCEN331272 BCEN2424_0662BCEN2424_0662BCEN2424_0663BCEN2424_0662BCEN2424_0662BCEN2424_0662BCEN2424_0662
BCEN331271 BCEN_0179BCEN_0179BCEN_0180BCEN_0179BCEN_0179BCEN_0179BCEN_0179
BANT592021 BAA_0194BAA_0194BAA_0194BAA_0194BAA_0194BAA_0194
BANT568206 BAMEG_0194BAMEG_0194BAMEG_0194BAMEG_0194BAMEG_0194BAMEG_0194
BANT261594 GBAA0163GBAA0163GBAA0163GBAA0163GBAA0163GBAA0163
BANT260799 BAS0165BAS0165BAS0165BAS0165BAS0165BAS0165
BAMY326423 RBAM_031440RBAM_031440RBAM_031440RBAM_031440RBAM_031440RBAM_031440
BAMB398577 BAMMC406_0583BAMMC406_0583BAMMC406_0584BAMMC406_0583BAMMC406_0583BAMMC406_0583BAMMC406_0583
BAMB339670 BAMB_0557BAMB_0557BAMB_0558BAMB_0557BAMB_0557BAMB_0557BAMB_0557
ASP62977 ACIAD0544ACIAD0544ACIAD0545ACIAD0544ACIAD0544ACIAD0544ACIAD0544
ASP1667 ARTH_0274ARTH_0274ARTH_0505ARTH_3529ARTH_3529ARTH_3529ARTH_3529
ASAL382245 ASA_4111ASA_4111ASA_4110ASA_4111ASA_4111ASA_4111ASA_4111
APLE434271 APJL_1696APJL_1696APJL_1697APJL_1696APJL_1696APJL_1696APJL_1696
APLE416269 APL_1665APL_1665APL_1666APL_1665APL_1665APL_1665APL_1665
AORE350688 CLOS_2543CLOS_2543CLOS_2543CLOS_2543CLOS_2543CLOS_2543
AHYD196024 AHA_0286AHA_0286AHA_0287AHA_0286AHA_0286AHA_0286AHA_0286
AAUR290340 AAUR_0256AAUR_4059AAUR_0530AAUR_2720AAUR_2720AAUR_2720AAUR_2720


Organism features enriched in list (features available for 185 out of the 194 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 7.963e-81617
Arrangment:Pairs 8.416e-1165112
Disease:Anthrax 0.009915544
Disease:Bubonic_plague 0.000965366
Disease:Dysentery 0.000965366
Disease:Gastroenteritis 0.00083521013
Disease:Meningitis_and_septicemia 0.009915544
Disease:Opportunistic_infections 0.003099755
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 2.668e-61111
Endospores:Yes 5.962e-83553
GC_Content_Range4:0-40 0.000181249213
GC_Content_Range4:40-60 0.000195990224
GC_Content_Range7:30-40 0.003322440166
GC_Content_Range7:50-60 0.000290149107
Genome_Size_Range5:0-2 2.375e-263155
Genome_Size_Range5:4-6 9.544e-1396184
Genome_Size_Range5:6-10 7.433e-62947
Genome_Size_Range9:1-2 2.239e-203128
Genome_Size_Range9:4-5 0.00012544696
Genome_Size_Range9:5-6 7.628e-85088
Genome_Size_Range9:6-8 0.00010892338
Gram_Stain:Gram_Pos 2.137e-773150
Habitat:Aquatic 0.00002471391
Habitat:Multiple 0.000016978178
Habitat:Specialized 0.0002360653
Habitat:Terrestrial 0.00009202031
Motility:Yes 0.0001943104267
Optimal_temp.:20-30 0.004660967
Optimal_temp.:30-37 0.00005411418
Oxygen_Req:Anaerobic 0.000544219102
Oxygen_Req:Facultative 1.351e-11100201
Pathogenic_in:Animal 0.00923042966
Pathogenic_in:Human 6.124e-794213
Pathogenic_in:No 3.387e-745226
Shape:Rod 1.692e-11146347
Shape:Spiral 0.0000249134
Temp._range:Mesophilic 1.833e-8173473
Temp._range:Thermophilic 0.0097066535



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 417
Effective number of orgs (counting one per cluster within 468 clusters): 342

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A1
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110181
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103311
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VFIS312309 ncbi Vibrio fischeri ES1140
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79011
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB31
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10211
SMED366394 ncbi Sinorhizobium medicae WSM4191
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA21
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38411
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6661
PRUM264731 ncbi Prevotella ruminicola 230
PPRO298386 ncbi Photobacterium profundum SS90
PNAP365044 ncbi Polaromonas naphthalenivorans CJ21
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.1
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NHAM323097 ncbi Nitrobacter hamburgensis X141
NFAR247156 ncbi Nocardia farcinica IFM 101521
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16221
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP266779 ncbi Chelativorans sp. BNC11
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-61
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23961
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FMAG334413 ncbi Finegoldia magna ATCC 293280
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R11
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124721
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSP376 Bradyrhizobium sp.1
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27051
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS421
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7421   EG12631   EG12629   EG12563   EG12548   EG12539   EG12380   
XORY360094 XOOORF_5062
XORY342109 XOO0304
XORY291331 XOO0332
XFAS405440
XFAS183190
XFAS160492
XCAM487884 XCC-B100_4280
XCAM316273 XCAORF_0169
XCAM314565 XC_4170
XCAM190485 XCC4079
XAXO190486 XAC4197
WSUC273121
WPIP955
WPIP80849
VFIS312309
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629 TERTU_0848
TTHE300852
TTHE262724
TTEN273068
TSP28240
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TKOD69014
TFUS269800 TFU_2114
TERY203124 TERY_2732
TELO197221
TDEN326298
TDEN292415
TDEN243275 TDE_0207
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP94122 SHEWANA3_2684
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSED425104 SSED_2778
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SONE211586 SO_1771
SMUT210007
SMEL266834 SMA0514
SMED366394 SMED_4531
SMAR399550
SLOI323850 SHEW_2533
SLAC55218
SGOR29390
SFUM335543
SELO269084
SDEN318161
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058 RPB_1888
RPAL316057 RPD_3478
RPAL316056 RPC_3674
RPAL316055 RPE_3712
RPAL258594 RPA3638
RMAS416276
RLEG216596 PRL100392
RFER338969 RFER_0956
RFEL315456
RETL347834 RHE_PC00145
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731 PST_2201
PSP312153
PSP296591 BPRO_3525
PRUM264731
PPRO298386
PNAP365044 PNAP_0046
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PING357804 PING_2932
PHOR70601
PGIN242619
PFUR186497
PCAR338963
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844
OTSU357244
OCAR504832 OCAR_5066
NWIN323098 NWI_2645
NSP387092
NSP35761 NOCA_3722
NSP103690 ALR3086
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NHAM323097 NHAM_3273
NFAR247156 NFA23660
NEUT335283
NEUR228410
NARO279238
MXAN246197 MXAN_0616
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSP266779 MESO_0316
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108
MLOT266835 MLL1676
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610 MEXT_3463
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243 MAV_2468
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
LXYL281090
LWEL386043
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMON265669
LMON169963
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495 LCHO_0327
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
JSP290400
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMAR272569
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HCHE349521 HCH_03543
HBUT415426
HAUR316274 HAUR_3436
HARS204773
HACI382638
GVIO251221 GLL2818
GURA351605
GSUL243231
GMET269799
GKAU235909
GFOR411154
GBET391165 GBCGDNIH1_0859
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FMAG334413
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DRAD243230 DR_1910
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087
CVIO243365 CV_2957
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78 CAUL_2070
CSP501479
CRUT413404
CPSY167879 CPS_3695
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK0381
CHYD246194
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105 CCV52592_0611
CCON360104 CCC13826_2190
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT441771
CBLO291272
CBLO203907
CBEI290402
CAULO
CABO218497
BTUR314724
BTRI382640
BTHE226186
BSUI470137
BSUI204722
BSP376 BRADO5812
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BLON206672 BL0620
BJAP224911 BLR6762
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
BABO262698
AYEL322098
AVAR240292 AVA_4858
AURANTIMONAS
ASP76114
ASP62928
ASP232721 AJS_2053
APHA212042
APER272557
ANAE240017
AMET293826
AMAR329726 AM1_4094
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACRY349163 ACRY_1272
ACEL351607
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669 ACID345_0242
AAVE397945 AAVE_2797
AAEO224324


Organism features enriched in list (features available for 389 out of the 417 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 1.718e-7117
Arrangment:Pairs 1.939e-1144112
Disease:Gastroenteritis 0.0012685313
Endospores:Yes 2.447e-71853
GC_Content_Range4:0-40 0.0001743161213
GC_Content_Range4:40-60 0.0002924131224
GC_Content_Range7:30-40 0.0044137123166
GC_Content_Range7:50-60 0.000513957107
Genome_Size_Range5:0-2 2.496e-25150155
Genome_Size_Range5:4-6 3.366e-1384184
Genome_Size_Range5:6-10 5.767e-61747
Genome_Size_Range9:0-1 0.00001322727
Genome_Size_Range9:1-2 3.322e-19123128
Genome_Size_Range9:4-5 0.00020764996
Genome_Size_Range9:5-6 1.146e-83588
Genome_Size_Range9:6-8 0.00006991438
Gram_Stain:Gram_Pos 1.379e-774150
Habitat:Aquatic 0.00002077791
Habitat:Multiple 7.531e-696178
Habitat:Specialized 0.00115504553
Habitat:Terrestrial 0.00019401131
Motility:Yes 0.0001292158267
Optimal_temp.:20-30 0.006081117
Optimal_temp.:30-37 0.0000983418
Oxygen_Req:Anaerobic 0.000872081102
Oxygen_Req:Facultative 8.024e-1199201
Pathogenic_in:Human 5.196e-6118213
Pathogenic_in:No 9.378e-6174226
Shape:Irregular_coccus 0.00091421717
Shape:Rod 2.612e-13192347
Shape:Sphere 0.00039451919
Shape:Spiral 0.00001193334
Temp._range:Hyperthermophilic 0.00088352223
Temp._range:Mesophilic 7.136e-7295473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 9
Effective number of orgs (counting one per cluster within 468 clusters): 9

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 13129 0.00169507977
CMIC31964 ncbi Clavibacter michiganensis sepedonicus 0.00291648617
RSAL288705 ncbi Renibacterium salmoninarum ATCC 33209 0.00296438637
PACN267747 ncbi Propionibacterium acnes KPA171202 0.00306228677
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 382 0.00430229107
CEFF196164 ncbi Corynebacterium efficiens YS-314 0.00450549167
CGLU196627 ncbi Corynebacterium glutamicum ATCC 13032 0.00548409427
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM4 0.009071410127
MABS561007 ncbi Mycobacterium abscessus ATCC 19977 0.009390810177


Names of the homologs of the genes in the group in each of these orgs
  G7421   EG12631   EG12629   EG12563   EG12548   EG12539   EG12380   
CDIP257309 DIP2078DIP0253DIP0254DIP0253DIP0253DIP0253DIP0253
CMIC31964 CMS3035CMS3035CMS2465CMS3035CMS3035CMS3035CMS3035
RSAL288705 RSAL33209_0835RSAL33209_2176RSAL33209_2015RSAL33209_2014RSAL33209_2014RSAL33209_2014RSAL33209_2014
PACN267747 PPA0738PPA0738PPA0739PPA0738PPA0738PPA0738PPA0738
CMIC443906 CMM_2908CMM_2908CMM_2271CMM_2908CMM_2908CMM_2908CMM_2908
CEFF196164 CE0611CE0611CE2384CE0611CE0611CE0611CE0611
CGLU196627 CG3216CG3216CG2732CG3216CG3216CG3216CG3216
ZMOB264203 ZMO1756ZMO1756ZMO1757ZMO1756ZMO1756ZMO1756ZMO1756
MABS561007 MAB_3634CMAB_3634CMAB_3635CMAB_3634CMAB_3634CMAB_3634CMAB_3634C


Organism features enriched in list (features available for 9 out of the 9 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:V-shaped_pairs 0.000212222
Endospores:No 0.00157278211
Genome_Size_Range5:2-4 0.00093328197
Genome_Size_Range9:3-4 0.0026464577
Gram_Stain:Gram_Neg 0.00558481333
Gram_Stain:Gram_Pos 0.00011308150
Habitat:Multiple 0.00404717178
Motility:No 4.377e-69151
Optimal_temp.:25-28 0.000212222



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
IDNCAT-PWY (L-idonate degradation)2461580.5772
RIBOKIN-PWY (ribose degradation)2791530.4609
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121900.4584
GLUTAMINDEG-PWY (glutamine degradation I)1911190.4475
GLUTDEG-PWY (glutamate degradation II)1941200.4461
PWY0-1314 (fructose degradation)2241310.4424
PWY-6196 (serine racemization)102780.4331
KETOGLUCONMET-PWY (ketogluconate metabolism)103780.4285
MANNIDEG-PWY (mannitol degradation I)99750.4188
PWY-5837 (1,4-dihydroxy-2-naphthoate biosynthesis I)2281290.4174
GALACTITOLCAT-PWY (galactitol degradation)73610.4124
PWY-6406 (salicylate biosynthesis I)1881120.4037



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12631   EG12629   EG12563   EG12548   EG12539   EG12380   
G74210.9998480.9993580.9998020.9998150.9998130.999816
EG126310.9995720.9998310.9998550.9998570.999858
EG126290.9994740.9994470.9994510.999429
EG125630.9998720.9998680.99988
EG125480.9999030.999897
EG125390.999898
EG12380



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PAIRWISE BLAST SCORES:

  G7421   EG12631   EG12629   EG12563   EG12548   EG12539   EG12380   
G74210.0f0--3.0e-428.9e-501.0e-482.0e-52
EG126319.6e-340.0f0-3.1e-261.5e-333.9e-403.3e-36
EG12629--0.0f0----
EG125633.1e-47--0.0f05.9e-692.7e-801.6e-82
EG125481.4e-355.9e-30-1.2e-470.0f03.8e-742.7e-73
EG125397.5e-463.1e-47-6.7e-771.6e-910.0f03.3e-123
EG123801.2e-471.4e-42-2.3e-742.8e-853.5e-1190.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12629 EG12631 (centered at EG12629)
EG12380 (centered at EG12380)
EG12539 (centered at EG12539)
EG12548 (centered at EG12548)
EG12563 (centered at EG12563)
G7421 (centered at G7421)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7421   EG12631   EG12629   EG12563   EG12548   EG12539   EG12380   
209/623199/623186/623204/623203/623199/623201/623
AAUR290340:2:Tyes037252682403240324032403
AAVE397945:0:Tyes--0----
ABAC204669:0:Tyes--0----
ACRY349163:8:Tyes--0----
AHYD196024:0:Tyes0010000
AMAR329726:9:Tyes--0----
AORE350688:0:Tyes00-0000
APLE416269:0:Tyes0010000
APLE434271:0:Tno0010000
ASAL382245:5:Tyes1101111
ASP1667:3:Tyes002323285328532853285
ASP232721:2:Tyes--0----
ASP62977:0:Tyes0010000
AVAR240292:3:Tyes--0----
BAMB339670:3:Tno0010000
BAMB398577:3:Tno0010000
BAMY326423:0:Tyes00-0000
BANT260799:0:Tno00-0000
BANT261594:2:Tno00-0000
BANT568206:2:Tyes00-0000
BANT592021:2:Tno00-0000
BCEN331271:2:Tno0010000
BCEN331272:3:Tyes0010000
BCER226900:1:Tyes00-0000
BCER288681:0:Tno00-0000
BCER315749:1:Tyes00-0000
BCER405917:1:Tyes00-0000
BCER572264:1:Tno00-0000
BCLA66692:0:Tyes00-0000
BHAL272558:0:Tyes00-0000
BJAP224911:0:Fyes--0----
BLIC279010:0:Tyes00-0000
BLON206672:0:Tyes--0----
BMAL243160:1:Tno1101111
BMAL320388:1:Tno1101111
BMAL320389:1:Tyes1101111
BPSE272560:1:Tyes1101111
BPSE320372:1:Tno1101111
BPSE320373:1:Tno1101111
BPUM315750:0:Tyes4040-0000
BSP36773:2:Tyes0010000
BSP376:0:Tyes--0----
BSUB:0:Tyes02141-0214121412141
BTHA271848:1:Tno0010000
BTHU281309:1:Tno00-0000
BTHU412694:1:Tno00-0000
BVIE269482:7:Tyes0010000
BWEI315730:4:Tyes00-0000
BXEN266265:1:Tyes00-0000
CACE272562:1:Tyes00-0000
CBOT36826:1:Tno00-0000
CBOT441770:0:Tyes00-0000
CBOT441772:1:Tno00-0000
CBOT498213:1:Tno00-0000
CBOT508765:1:Tyes00-0000
CBOT515621:2:Tyes00-0000
CBOT536232:0:Tno00-0000
CCON360104:2:Tyes0------
CCUR360105:0:Tyes0------
CDIF272563:1:Tyes00-0000
CDIP257309:0:Tyes1811010000
CEFF196164:0:Fyes0018100000
CGLU196627:0:Tyes4304300430430430430
CHUT269798:0:Tyes-010000
CJAP155077:0:Tyes004840000
CJEI306537:0:Tyes--0----
CMIC31964:2:Tyes5465460546546546546
CMIC443906:2:Tyes6506500650650650650
CNOV386415:0:Tyes00-0000
CPHY357809:0:Tyes00-0000
CPSY167879:0:Tyes--0----
CSAL290398:0:Tyes0010000
CSP78:2:Tyes--0----
CVIO243365:0:Tyes--0----
DRAD243230:3:Tyes--0----
ECAR218491:0:Tyes2543101111
ECOL199310:0:Tno0908909206920342034876
ECOL316407:0:Tno0109810971565153815101117
ECOL331111:6:Tno08498501806826826826
ECOL362663:0:Tno080981077917761776779
ECOL364106:1:Tno083183280317501750803
ECOL405955:2:Tyes074674771716691669717
ECOL409438:6:Tyes07307311654708708708
ECOL413997:0:Tno0706707162215691569687
ECOL439855:4:Tno2222231101100810080
ECOL469008:0:Tno68410340021345221
ECOL481805:0:Tno7051022222222
ECOL585034:0:Tno07337341649711711711
ECOL585035:0:Tno080080118461816773773
ECOL585055:0:Tno0823824192217671767801
ECOL585056:2:Tno25252610289959080
ECOL585057:0:Tno2222238878358350
ECOL585397:0:Tno0892893859859859859
ECOL83334:0:Tno2828291059000
ECOLI:0:Tno0699700160315751545680
ECOO157:0:Tno2929301022000
EFER585054:1:Tyes2828290000
ESP42895:1:Tyes1616170000
FJOH376686:0:Tyes00-0000
FNOD381764:0:Tyes0--0000
FNUC190304:0:Tyes00-0000
GBET391165:0:Tyes--0----
GOXY290633:5:Tyes4794790479479479479
GTHE420246:1:Tyes00-0000
GVIO251221:0:Tyes--0----
HAUR316274:2:Tyes--0----
HCHE349521:0:Tyes--0----
HINF71421:0:Tno00-0000
HMOD498761:0:Tyes00-0000
HSOM205914:1:Tyes0010133413341334
HSOM228400:0:Tno0030000
KPNE272620:2:Tyes0244524462428242824282428
KRAD266940:2:Fyes1231123101231123112311231
LBRE387344:2:Tyes90-9999
LCAS321967:1:Tyes00-0000
LCHO395495:0:Tyes--0----
LMES203120:1:Tyes00-0000
LPLA220668:0:Tyes00-0000
LREU557436:0:Tyes0--0000
LSAK314315:0:Tyes00-0000
LSPH444177:1:Tyes00-0000
MABS561007:1:Tyes0010000
MAVI243243:0:Tyes--0----
MEXT419610:0:Tyes--0----
MGIL350054:3:Tyes1101111
MLOT266835:2:Tyes--0----
MMAR394221:0:Tyes0030000
MSME246196:0:Tyes3314331410331433143314
MSP164756:1:Tno11011--
MSP164757:0:Tno11011-1
MSP189918:2:Tyes11011--
MSP266779:3:Tyes--0----
MSP400668:0:Tyes188618860-1886-1886
MSUC221988:0:Tyes17001700653037017001700
MTHE264732:0:Tyes00-0000
MVAN350058:0:Tyes110111-
MXAN246197:0:Tyes--0----
NFAR247156:2:Tyes--0----
NGON242231:0:Tyes1101111
NHAM323097:2:Tyes--0----
NMEN122586:0:Tno0010000
NMEN122587:0:Tyes1101111
NMEN272831:0:Tno0010000
NMEN374833:0:Tno1101111
NSP103690:6:Tyes--0----
NSP35761:1:Tyes--0----
NWIN323098:0:Tyes--0----
OANT439375:4:Tyes5105100510510510510
OCAR504832:0:Tyes--0----
OIHE221109:0:Tyes00-976976976976
PACN267747:0:Tyes0010000
PAER208963:0:Tyes0010000
PAER208964:0:Tno1101111
PATL342610:0:Tyes0013990000
PCRY335284:1:Tyes0--0---
PDIS435591:0:Tyes00-0000
PENT384676:0:Tyes0010000
PFLU205922:0:Tyes0010000
PFLU216595:1:Tyes0236323642363236323632363
PFLU220664:0:Tyes0121312141213121312131213
PHAL326442:0:Tyes0010000
PING357804:0:Tyes--0----
PLUM243265:0:Fyes1101518151811518
PMEN399739:0:Tyes0-1146---0
PMOB403833:0:Tyes00-0000
PMUL272843:1:Tyes1101111
PNAP365044:8:Tyes--0----
PPEN278197:0:Tyes00-0000
PPUT160488:0:Tno1101111
PPUT351746:0:Tyes0010000
PPUT76869:0:Tno0010000
PSP117:0:Tyes---0-00
PSP296591:2:Tyes--0----
PSP56811:2:Tyes0---0--
PSTU379731:0:Tyes--0----
PSYR205918:0:Tyes1101111
PSYR223283:2:Tyes1101111
RETL347834:2:Tyes--0----
REUT264198:2:Tyes00-0000
REUT264198:3:Tyes--0----
REUT381666:1:Tyes-0-0000
REUT381666:2:Tyes1766-0----
RFER338969:1:Tyes--0----
RLEG216596:3:Tyes--0----
RMET266264:1:Tyes00-0000
RMET266264:2:Tyes--0----
RPAL258594:0:Tyes--0----
RPAL316055:0:Tyes--0----
RPAL316056:0:Tyes--0----
RPAL316057:0:Tyes--0----
RPAL316058:0:Tyes--0----
RRUB269796:1:Tyes00-0000
RSAL288705:0:Tyes0134111801179117911791179
RSOL267608:0:Tyes00-0000
RSOL267608:1:Tyes--0----
RSP101510:3:Fyes1021029350000
SAUR158878:1:Tno00-0000
SAUR158879:1:Tno00-0000
SAUR196620:0:Tno00-0000
SAUR273036:0:Tno00-0000
SAUR282458:0:Tno00-0000
SAUR282459:0:Tno00-0000
SAUR359786:1:Tno00-0000
SAUR359787:1:Tno00-0000
SAUR367830:3:Tno00-0000
SAUR418127:0:Tyes00-0000
SAUR426430:0:Tno00-0000
SAUR93061:0:Fno00-0000
SAUR93062:1:Tno00-0000
SAVE227882:1:Fyes0341034113410341034103410
SBAL399599:3:Tyes1101111
SBAL402882:1:Tno1101111
SBOY300268:1:Tyes0626627597597597597
SCO:2:Fyes3355335503355335533553355
SDEG203122:0:Tyes1009100901009100910091009
SDYS300267:1:Tyes00166666666
SENT209261:0:Tno11015151515
SENT220341:0:Tno11015151515
SENT295319:0:Tno15151608648640
SENT321314:2:Tno27272809169160
SENT454169:2:Tno3030310101710170
SEPI176279:1:Tyes00-0000
SEPI176280:0:Tno00-0000
SERY405948:0:Tyes1916191602191619161916
SFLE198214:0:Tyes191920750000
SFLE373384:0:Tno0021740000
SGLO343509:3:Tyes1851850185185185185
SHAE279808:0:Tyes00-0000
SHAL458817:0:Tyes00-0000
SHIGELLA:0:Tno2010143202020
SLOI323850:0:Tyes0------
SMED366394:2:Tyes--0----
SMEL266834:0:Tyes--0----
SONE211586:1:Tyes0------
SPEA398579:0:Tno00-0000
SPRO399741:1:Tyes0303930383196319631963196
SSAP342451:2:Tyes00-0000
SSED425104:0:Tyes0------
SSON300269:1:Tyes074674762314681468623
SSP94122:1:Tyes0------
STHE292459:0:Tyes00-0000
STYP99287:1:Tyes27272809609600
TDEN243275:0:Tyes---0---
TERY203124:0:Tyes--0----
TFUS269800:0:Tyes--0----
TLET416591:0:Tyes0--0000
TSP1755:0:Tyes-0-0000
TTUR377629:0:Tyes--0----
VCHO:0:Tyes0010000
VCHO345073:1:Tno0010000
VPAR223926:1:Tyes1101111
VVUL196600:2:Tyes1101111
VVUL216895:1:Tno1101111
XAUT78245:1:Tyes0010000
XAXO190486:0:Tyes--0----
XCAM190485:0:Tyes--0----
XCAM314565:0:Tno--0----
XCAM316273:0:Tno--0----
XCAM487884:0:Tno--0----
XORY291331:0:Tno--0----
XORY342109:0:Tyes--0----
XORY360094:0:Tno--0----
YENT393305:1:Tyes2909290929080290929092909
YPES187410:5:Tno4534534540453453453
YPES214092:3:Tno3086308630850308630863086
YPES349746:2:Tno0020000
YPES360102:3:Tyes4124124110412412412
YPES377628:2:Tno4034034020403403403
YPES386656:2:Tno1101111
YPSE273123:2:Tno5095095080509509509
YPSE349747:2:Tno3290329032890329032903290
ZMOB264203:0:Tyes0010000



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