CANDIDATE ID: 104

CANDIDATE ID: 104

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9981014e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.1428585e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11583 (gcl) (b0507)
   Products of gene:
     - GLYOCARBOLIG-MONOMER (Gcl)
     - GLYOCARBOLIG-CPLX (glyoxylate carboligase)
       Reactions:
        2 glyoxylate + H+  ->  CO2 + tartronate semialdehyde
         In pathways
         GLYCOL-GLYOXDEG-PWY (superpathway of glycol metabolism and degradation)
         GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)

- EG11226 (leuA) (b0074)
   Products of gene:
     - 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
       Reactions:
        2-oxoisovalerate + acetyl-CoA + H2O  ->  (2S)-2-isopropylmalate + coenzyme A + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG10502 (ilvN) (b3670)
   Products of gene:
     - SMALLILVN-MONOMER (IlvN)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)

- EG10500 (ilvI) (b0077)
   Products of gene:
     - ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10499 (ilvH) (brnP)
   Products of gene:
     - ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10495 (ilvC) (b3774)
   Products of gene:
     - KETOLREDUCTOISOM-MONOMER (IlvC)
     - CPLX0-7643 (acetohydroxy acid isomeroreductase)
       Reactions:
        2-aceto-2-hydroxy-butanoate + NADPH + H+  =  2,3-dihydroxy-3-methylvalerate + NADP+
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2,3-dihydroxy-isovalerate + NADP+  =  (S)-2-acetolactate + NADPH + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         VALSYN-PWY (valine biosynthesis)

- EG10494 (ilvB) (b3671)
   Products of gene:
     - LARGEILVB-MONOMER (IlvB)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 280
Effective number of orgs (counting one per cluster within 468 clusters): 215

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XAUT78245 ncbi Xanthobacter autotrophicus Py26
WSUC273121 ncbi Wolinella succinogenes DSM 17407
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0167
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
VFIS312309 ncbi Vibrio fischeri ES1147
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
UMET351160 ncbi uncultured methanogenic archaeon RC-I7
TTHE300852 ncbi Thermus thermophilus HB87
TTHE262724 ncbi Thermus thermophilus HB277
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB46
TSP28240 Thermotoga sp.6
TSP1755 Thermoanaerobacter sp.7
TROS309801 ncbi Thermomicrobium roseum DSM 51597
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332236
TPET390874 ncbi Thermotoga petrophila RKU-16
TMAR243274 ncbi Thermotoga maritima MSB86
TERY203124 ncbi Trichodesmium erythraeum IMS1017
TELO197221 ncbi Thermosynechococcus elongatus BP-16
TCRU317025 ncbi Thiomicrospira crunogena XCL-27
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen7
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
STHE292459 ncbi Symbiobacterium thermophilum IAM 148636
SSUI391296 ncbi Streptococcus suis 98HAH336
SSP94122 ncbi Shewanella sp. ANA-37
SSP84588 ncbi Synechococcus sp. WH 81026
SSP64471 ncbi Synechococcus sp. CC93117
SSP387093 ncbi Sulfurovum sp. NBC37-17
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)6
SSP321327 ncbi Synechococcus sp. JA-3-3Ab7
SSP1148 ncbi Synechocystis sp. PCC 68036
SSP1131 Synechococcus sp. CC96056
SSON300269 ncbi Shigella sonnei Ss0467
SSED425104 ncbi Shewanella sediminis HAW-EB37
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-17
SLOI323850 ncbi Shewanella loihica PV-47
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB7
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23386
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SELO269084 ncbi Synechococcus elongatus PCC 63017
SDYS300267 ncbi Shigella dysenteriae Sd1977
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SCO ncbi Streptomyces coelicolor A3(2)6
SBOY300268 ncbi Shigella boydii Sb2277
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
SAVE227882 ncbi Streptomyces avermitilis MA-46806
SARE391037 ncbi Salinispora arenicola CNS-2056
RSP101510 ncbi Rhodococcus jostii RHA16
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH346
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
PTHE370438 ncbi Pelotomaculum thermopropionicum SI7
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6666
PPUT351746 ncbi Pseudomonas putida F16
PPRO298386 ncbi Photobacterium profundum SS97
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMOB403833 ncbi Petrotoga mobilis SJ957
PMEN399739 ncbi Pseudomonas mendocina ymp7
PMAR93060 ncbi Prochlorococcus marinus MIT 92156
PMAR74547 ncbi Prochlorococcus marinus MIT 93137
PMAR74546 ncbi Prochlorococcus marinus MIT 93126
PMAR59920 ncbi Prochlorococcus marinus NATL2A7
PMAR167555 ncbi Prochlorococcus marinus NATL1A7
PMAR167546 ncbi Prochlorococcus marinus MIT 93016
PMAR167542 ncbi Prochlorococcus marinus MIT 95156
PMAR167540 Prochlorococcus marinus pastoris MED4ax6
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13757
PMAR146891 ncbi Prochlorococcus marinus AS96016
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PING357804 ncbi Psychromonas ingrahamii 377
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23807
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
OCAR504832 ncbi Oligotropha carboxidovorans OM56
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NSP387092 ncbi Nitratiruptor sp. SB155-27
NSP35761 Nocardioides sp.6
NSP103690 ncbi Nostoc sp. PCC 71207
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NHAM323097 ncbi Nitrobacter hamburgensis X146
NFAR247156 ncbi Nocardia farcinica IFM 101526
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-16
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra6
MTUB336982 ncbi Mycobacterium tuberculosis F116
MTHE349307 ncbi Methanosaeta thermophila PT7
MTHE264732 ncbi Moorella thermoacetica ATCC 390737
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H7
MTBRV ncbi Mycobacterium tuberculosis H37Rv6
MTBCDC ncbi Mycobacterium tuberculosis CDC15516
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E7
MSP189918 ncbi Mycobacterium sp. KMS6
MSP164757 ncbi Mycobacterium sp. JLS6
MSP164756 ncbi Mycobacterium sp. MCS6
MSME246196 ncbi Mycobacterium smegmatis MC2 1556
MMAZ192952 ncbi Methanosarcina mazei Go17
MMAR444158 ncbi Methanococcus maripaludis C67
MMAR426368 ncbi Methanococcus maripaludis C76
MMAR402880 ncbi Methanococcus maripaludis C57
MMAR368407 ncbi Methanoculleus marisnigri JR17
MMAR267377 ncbi Methanococcus maripaludis S27
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MLEP272631 ncbi Mycobacterium leprae TN6
MLAB410358 ncbi Methanocorpusculum labreanum Z6
MKAN190192 ncbi Methanopyrus kandleri AV197
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26617
MHUN323259 ncbi Methanospirillum hungatei JF-17
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK6
MCAP243233 ncbi Methylococcus capsulatus Bath7
MBUR259564 ncbi Methanococcoides burtonii DSM 62427
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P26
MBOV233413 ncbi Mycobacterium bovis AF2122/976
MBAR269797 ncbi Methanosarcina barkeri Fusaro7
MAQU351348 ncbi Marinobacter aquaeolei VT87
MAER449447 ncbi Microcystis aeruginosa NIES-8437
MAEO419665 ncbi Methanococcus aeolicus Nankai-37
MACE188937 ncbi Methanosarcina acetivorans C2A7
MABS561007 ncbi Mycobacterium abscessus ATCC 199776
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1306
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566016
LCHO395495 ncbi Leptothrix cholodnii SP-67
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
JSP375286 ncbi Janthinobacterium sp. Marseille6
HMOD498761 ncbi Heliobacterium modesticaldum Ice17
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HCHE349521 ncbi Hahella chejuensis KCTC 23967
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237796
HARS204773 ncbi Herminiimonas arsenicoxydans6
GVIO251221 ncbi Gloeobacter violaceus PCC 74217
GURA351605 ncbi Geobacter uraniireducens Rf47
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-27
GSUL243231 ncbi Geobacter sulfurreducens PCA7
GMET269799 ncbi Geobacter metallireducens GS-157
GKAU235909 ncbi Geobacillus kaustophilus HTA4267
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S856
FSP1855 Frankia sp. EAN1pec6
FSP106370 ncbi Frankia sp. CcI36
FALN326424 ncbi Frankia alni ACN14a6
ESP42895 Enterobacter sp.7
EFER585054 ncbi Escherichia fergusonii ATCC 354697
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a7
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A7
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough7
DSP255470 ncbi Dehalococcoides sp. CBDB16
DSP216389 ncbi Dehalococcoides sp. BAV16
DRED349161 ncbi Desulfotomaculum reducens MI-17
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DETH243164 ncbi Dehalococcoides ethenogenes 1957
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G206
DARO159087 ncbi Dechloromonas aromatica RCB7
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA6
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)7
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPHY357809 ncbi Clostridium phytofermentans ISDg6
CMET456442 ncbi Candidatus Methanoregula boonei 6A87
CKLU431943 ncbi Clostridium kluyveri DSM 5556
CJEJ407148 ncbi Campylobacter jejuni jejuni 811166
CJEJ360109 ncbi Campylobacter jejuni doylei 269.976
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1766
CJEJ195099 ncbi Campylobacter jejuni RM12216
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111686
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29017
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3816
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130326
CFET360106 ncbi Campylobacter fetus fetus 82-406
CEFF196164 ncbi Corynebacterium efficiens YS-3146
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C7
CCUR360105 ncbi Campylobacter curvus 525.926
CCON360104 ncbi Campylobacter concisus 138266
CAULO ncbi Caulobacter crescentus CB156
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-277
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUB ncbi Bacillus subtilis subtilis 1686
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.6
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)6
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BCLA66692 ncbi Bacillus clausii KSM-K166
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-987
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145797
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
AVAR240292 ncbi Anabaena variabilis ATCC 294137
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62928 ncbi Azoarcus sp. BH726
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AMET293826 ncbi Alkaliphilus metalliredigens QYMF6
AMAR329726 ncbi Acaryochloris marina MBIC110176
AHYD196024 Aeromonas hydrophila dhakensis7
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43047
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ACRY349163 ncbi Acidiphilium cryptum JF-56
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABUT367737 ncbi Arcobacter butzleri RM40186
ABOR393595 ncbi Alcanivorax borkumensis SK26
AAEO224324 ncbi Aquifex aeolicus VF56


Names of the homologs of the genes in the group in each of these orgs
  EG11583   EG11226   EG10502   EG10500   EG10499   EG10495   EG10494   
YPSE349747 YPSIP31758_3401YPSIP31758_3405YPSIP31758_1838YPSIP31758_3401YPSIP31758_3400YPSIP31758_0163YPSIP31758_1839
YPSE273123 YPTB0675YPTB0672YPTB2217YPTB0675YPTB0676YPTB0145YPTB2216
YPES386656 YPDSF_3102YPDSF_3106YPDSF_0848YPDSF_3102YPDSF_3101YPDSF_3501YPDSF_0849
YPES377628 YPN_0407YPN_0403YPN_1756YPN_0407YPN_0408YPN_0077YPN_1755
YPES360102 YPA_3560YPA_3564YPA_1643YPA_3560YPA_3559YPA_0132YPA_1642
YPES349746 YPANGOLA_A2932YPANGOLA_A2936YPANGOLA_A2288YPANGOLA_A2932YPANGOLA_A2931YPANGOLA_A0493YPANGOLA_A0482
YPES214092 YPO0539YPO0533YPO2294YPO0539YPO0540YPO3888YPO2293
YPES187410 Y3640Y3645Y2127Y3640Y3639Y0345Y2126
YENT393305 YE0658YE0654YE2061YE0658YE0659YE0155YE2060
XAUT78245 XAUT_2367XAUT_1329XAUT_1488XAUT_1489XAUT_1490XAUT_1488
WSUC273121 WS0103WS0624WS0102WS0103WS0102WS1878WS0103
VVUL216895 VV1_0648VV1_0654VV1_0647VV1_0648VV1_0647VV1_1077VV1_1032
VVUL196600 VV0495VV0487VV0496VV0495VV0496VV0035VV3240
VPAR223926 VP0352VP0346VP0353VP0352VP0353VP0035VP3058
VFIS312309 VF2263VF0295VF2262VF2263VF2262VF2528VF2556
VCHO345073 VC0395_A2059VC0395_A2065VC0395_A2058VC0395_A2059VC0395_A2058VC0395_A2550VC0395_A2488
VCHO VC2483VC2490VC2482VC2483VC2482VC0162VC0031
UMET351160 LRC534RCIX673LRC533LRC534LRC533LRC519LRC534
TTHE300852 TTHA1213TTHA1210TTHA1212TTHA1213TTHA1212TTHA1211TTHA1213
TTHE262724 TT_C0852TT_C0849TT_C0851TT_C0852TT_C0851TT_C0850TT_C0852
TTEN273068 TTE0021TTE0016TTE0014TTE0014TTE0015TTE0021
TSP28240 TRQ2_0389TRQ2_0384TRQ2_0388TRQ2_0389TRQ2_0388TRQ2_0387
TSP1755 TETH514_0019TETH514_0014TETH514_0012TETH514_0019TETH514_0012TETH514_0013TETH514_0019
TROS309801 TRD_0627TRD_1690TRD_0626TRD_0627TRD_0626TRD_0625TRD_0627
TPSE340099 TETH39_0020TETH39_0015TETH39_0013TETH39_0013TETH39_0014TETH39_0020
TPET390874 TPET_0372TPET_0367TPET_0371TPET_0372TPET_0371TPET_0370
TMAR243274 TM_0548TM_0553TM_0549TM_0548TM_0549TM_0550
TERY203124 TERY_2843TERY_2253TERY_1850TERY_2843TERY_1850TERY_4335TERY_2843
TELO197221 TLR1296TLL1397TLL0880TLR1296TLL0880TLR1296
TCRU317025 TCR_0634TCR_0611TCR_0635TCR_0634TCR_0635TCR_0636TCR_0634
SWOL335541 SWOL_2146SWOL_2143SWOL_2145SWOL_2146SWOL_2145SWOL_2144SWOL_2146
STYP99287 STM0517STM0113STM3795STM0116STM0117STM3909STM3901
STHE292459 STH2684STH2687STH2689STH2684STH2689STH2684
SSUI391296 SSU98_1891SSU98_1954SSU98_1891SSU98_1890SSU98_1889SSU98_1891
SSP94122 SHEWANA3_2269SHEWANA3_3761SHEWANA3_2270SHEWANA3_2269SHEWANA3_2270SHEWANA3_0355SHEWANA3_0356
SSP84588 SYNW0730OR1620SYNW0680OR1970SYNW1746OR2980SYNW0680OR1970SYNW1650OR0554SYNW1746OR2980
SSP64471 GSYN2129GSYN1052GSYN0962GSYN2129GSYN0962GSYN0766GSYN2129
SSP387093 SUN_1823SUN_1956SUN_1822SUN_1823SUN_1822SUN_0443SUN_1823
SSP321332 CYB_0648CYB_1442CYB_0971CYB_0648CYB_0971CYB_0648
SSP321327 CYA_2073CYA_2223CYA_2130CYA_2073CYA_2130CYA_0246CYA_2073
SSP1148 SLR2088SLR0186SLL0065SLR2088SLL0065SLR2088
SSP1131 SYNCC9605_0717SYNCC9605_1939SYNCC9605_1989SYNCC9605_1989SYNCC9605_0839SYNCC9605_0717
SSON300269 SSO_0084SSO_0081SSO_3624SSO_0084SSO_0085SSO_3945SSO_3939
SSED425104 SSED_2666SSED_0393SSED_2667SSED_2666SSED_2667SSED_4166SSED_4165
SPRO399741 SPRO_0748SPRO_0745SPRO_0733SPRO_0748SPRO_0749SPRO_4751SPRO_0734
SPEA398579 SPEA_1911SPEA_3828SPEA_1910SPEA_1911SPEA_1910SPEA_0344SPEA_0345
SONE211586 SO_2279SO_4236SO_2278SO_2279SO_2278SO_4349SO_4347
SLOI323850 SHEW_1776SHEW_3472SHEW_1775SHEW_1776SHEW_1775SHEW_0288SHEW_0289
SHIGELLA GCLLEUAILVNILVIILVHILVCILVB
SHAL458817 SHAL_2387SHAL_0438SHAL_2388SHAL_2387SHAL_2388SHAL_3945SHAL_3944
SFUM335543 SFUM_3024SFUM_0306SFUM_3022SFUM_3024SFUM_3025SFUM_3026SFUM_3023
SFLE373384 SFV_0474SFV_0066SFV_3839SFV_0068SFV_0069SFV_3729SFV_3838
SFLE198214 AAN42100.1AAN41734.1AAN45231.1AAN41737.1AAN41738.1AAN45286.1AAN45280.1
SERY405948 SACE_6729SACE_6158SACE_6159SACE_6158SACE_6157SACE_6159
SENT454169 SEHA_C0625SEHA_C0124SEHA_C4126SEHA_C0127SEHA_C0128SEHA_C4240SEHA_C4232
SENT321314 SCH_0113SCH_0109SCH_3715SCH_0113SCH_0114SCH_3814SCH_3716
SENT295319 SPA2205SPA0115SPA3645SPA0118SPA0119SPA3748SPA3740
SENT220341 STY0565STY0132STY3987STY0135STY0136STY3648STY3986
SENT209261 T2343T0117T3723T0120T0121T3389T3722
SELO269084 SYC1366_CSYC0145_DSYC1672_CSYC1366_CSYC1672_CSYC0010_CSYC1366_C
SDYS300267 SDY_0395SDY_0101SDY_4154SDY_0107SDY_0108SDY_3974SDY_4155
SDEN318161 SDEN_0334SDEN_2123SDEN_2122SDEN_2123SDEN_3415SDEN_3414
SDEG203122 SDE_2544SDE_2523SDE_2543SDE_2544SDE_2543SDE_2539
SCO SCO6201SCO5513SCO5512SCO5513SCO7154SCO5512
SBOY300268 SBO_0411SBO_0061SBO_3699SBO_0065SBO_0066SBO_3785SBO_3779
SBAL402882 SHEW185_2374SHEW185_0385SHEW185_2375SHEW185_2374SHEW185_2375SHEW185_4010SHEW185_4009
SBAL399599 SBAL195_2490SBAL195_0397SBAL195_2491SBAL195_2490SBAL195_2491SBAL195_4129SBAL195_4128
SAVE227882 SAV2028SAV2732SAV2733SAV2732SAV2731SAV2733
SARE391037 SARE_1123SARE_1124SARE_1123SARE_1124SARE_1125SARE_1123
RSP101510 RHA1_RO03223RHA1_RO06487RHA1_RO06486RHA1_RO06487RHA1_RO06488RHA1_RO06486
RSOL267608 RSC3281RSC2072RSC2076RSC2077RSC2076RSC2075
RPAL316058 RPB_3345RPB_3330RPB_3345RPB_3344RPB_3341RPB_3345
RPAL316057 RPD_2098RPD_2112RPD_2098RPD_2100RPD_2102RPD_2098
RPAL316056 RPC_3255RPC_3235RPC_3255RPC_3253RPC_3248RPC_3255
RPAL316055 RPE_2187RPE_2209RPE_2187RPE_2189RPE_2195RPE_2187
RPAL258594 RPA2031RPA2046RPA2031RPA2032RPA2035RPA2031
RMET266264 RMET_3448RMET_0918RMET_0912RMET_0911RMET_0912RMET_0913
RFER338969 RFER_3322RFER_2345RFER_3323RFER_3322RFER_3323RFER_3324
REUT381666 H16_A3598H16_A1041H16_A1036H16_A1035H16_A1036H16_A1037
REUT264198 REUT_A3291REUT_A0953REUT_A0948REUT_A0947REUT_A0948REUT_A0949
PTHE370438 PTH_0530PTH_0531PTH_0736PTH_0527PTH_0528PTH_0529PTH_0527
PSTU379731 PST_3114PST_3240PST_3257PST_3258PST_3257PST_3256
PSP312153 PNUC_1063PNUC_1058PNUC_1062PNUC_1063PNUC_1062PNUC_1061
PSP296591 BPRO_4561BPRO_2322BPRO_2318BPRO_2317BPRO_2318BPRO_2319
PPUT351746 PPUT_1572PPUT_4543PPUT_4544PPUT_4543PPUT_4542PPUT_4544
PPRO298386 PBPRA2275PBPRA0419PBPRA0426PBPRA0425PBPRA0426PBPRA0085PBPRA3593
PMUL272843 PM0870PM1962PM0869PM0870PM0869PM1284PM1628
PMOB403833 PMOB_1592PMOB_1589PMOB_1591PMOB_1592PMOB_1591PMOB_1590PMOB_1592
PMEN399739 PMEN_2769PMEN_0989PMEN_1007PMEN_1006PMEN_1007PMEN_1009PMEN_1006
PMAR93060 P9215_12011P9215_13601P9215_06071P9215_13601P9215_15441P9215_06071
PMAR74547 PMT1239PMT1121PMT1176PMT1239PMT1176PMT0313PMT1239
PMAR74546 PMT9312_1077PMT9312_1253PMT9312_0526PMT9312_1253PMT9312_1412PMT9312_0526
PMAR59920 PMN2A_1858PMN2A_0686PMN2A_0764PMN2A_1858PMN2A_0764PMN2A_0881PMN2A_1858
PMAR167555 NATL1_05831NATL1_15201NATL1_16041NATL1_05831NATL1_16041NATL1_17361NATL1_05831
PMAR167546 P9301ORF_1193P9301ORF_1367P9301ORF_0565P9301ORF_1367P9301ORF_1528P9301ORF_0565
PMAR167542 P9515ORF_1208P9515ORF_1381P9515ORF_0626P9515ORF_1381P9515ORF_1543P9515ORF_0626
PMAR167540 PMM1066PMM1154PMM0526PMM1154PMM1315PMM0526
PMAR167539 PRO_0526PRO_1134PRO_1251PRO_0526PRO_1251PRO_1389PRO_0526
PMAR146891 A9601_11711A9601_13311A9601_05821A9601_13311A9601_15141A9601_05821
PLUM243265 PLU3666PLU3673PLU3665PLU3666PLU3665PLU4668PLU4685
PING357804 PING_3430PING_0216PING_3431PING_3430PING_3431PING_0853PING_0348
PHAL326442 PSHAA2894PSHAB0463PSHAB0464PSHAB0463PSHAA0849PSHAA2771
PFLU220664 PFL_1701PFL_5254PFL_5255PFL_5254PFL_5253PFL_5255
PFLU205922 PFL_1598PFL_4787PFL_4788PFL_4787PFL_4786PFL_4788
PENT384676 PSEEN1672PSEEN4710PSEEN4711PSEEN4710PSEEN4709PSEEN4711
PCRY335284 PCRYO_0522PCRYO_0523PCRYO_0522PCRYO_0523PCRYO_0524PCRYO_0522
PCAR338963 PCAR_1910PCAR_1907PCAR_1909PCAR_1910PCAR_1909PCAR_2518PCAR_1910
PATL342610 PATL_0624PATL_3268PATL_0625PATL_0624PATL_0625PATL_4255
PARC259536 PSYC_0527PSYC_0528PSYC_0527PSYC_0528PSYC_0529PSYC_0527
PAER208964 PA1502PA4695PA4696PA4695PA4694PA4696
PAER208963 PA14_45000PA14_62150PA14_62160PA14_62150PA14_62130PA14_62160
OIHE221109 OB2623OB2620OB2622OB2623OB2622OB2623
OCAR504832 OCAR_6562OCAR_5296OCAR_5290OCAR_5291OCAR_5292OCAR_5290
NWIN323098 NWI_2343NWI_2338NWI_2343NWI_2342NWI_2341NWI_2343
NSP387092 NIS_0810NIS_1407NIS_0811NIS_0810NIS_0811NIS_1161NIS_0810
NSP35761 NOCA_3392NOCA_3391NOCA_3392NOCA_3391NOCA_3390NOCA_3392
NSP103690 ALL4613ALR4840ALR4627ALL4613ALR4627ALL2315ALL4613
NOCE323261 NOC_2520NOC_2516NOC_2519NOC_2520NOC_2519NOC_2518
NHAM323097 NHAM_2722NHAM_2715NHAM_2722NHAM_2721NHAM_2720NHAM_2722
NFAR247156 NFA42320NFA42310NFA42320NFA42310NFA42300NFA30060
NEUT335283 NEUT_1262NEUT_1244NEUT_1261NEUT_1262NEUT_1261NEUT_1260
NEUR228410 NE1325NE1320NE1324NE1325NE1324NE1323
MVAN350058 MVAN_2122MVAN_2123MVAN_2122MVAN_2123MVAN_2124MVAN_2122
MTUB419947 MRA_3033MRA_3032MRA_3033MRA_3032MRA_3031MRA_3033
MTUB336982 TBFG_13018TBFG_13017TBFG_13018TBFG_13017TBFG_13016TBFG_13018
MTHE349307 MTHE_0110MTHE_1298MTHE_0111MTHE_0110MTHE_0111MTHE_0112MTHE_0110
MTHE264732 MOTH_2258MOTH_2255MOTH_2257MOTH_2258MOTH_2257MOTH_1350MOTH_2258
MTHE187420 MTH1444MTH1481MTH1443MTH1444MTH1443MTH1442MTH1444
MTBRV RV3003CRV3002CRV3003CRV3002CRV3001CRV3003C
MTBCDC MT3083MT3082MT3083MT3082MT3081MT3083
MSUC221988 MS1319MS0599MS1318MS1319MS1318MS0045MS2223
MSP189918 MKMS_1952MKMS_1953MKMS_1952MKMS_1953MKMS_1954MKMS_1952
MSP164757 MJLS_1886MJLS_1887MJLS_1886MJLS_1887MJLS_1888MJLS_1886
MSP164756 MMCS_1906MMCS_1907MMCS_1906MMCS_1907MMCS_1908MMCS_1906
MSME246196 MSMEG_5476MSMEG_2373MSMEG_2372MSMEG_2373MSMEG_2374MSMEG_2372
MMAZ192952 MM0670MM1284MM0669MM0670MM0669MM0668MM0670
MMAR444158 MMARC6_0239MMARC6_1596MMARC6_0238MMARC6_0239MMARC6_0238MMARC6_0233MMARC6_0239
MMAR426368 MMARC7_1674MMARC7_0316MMARC7_1675MMARC7_1675MMARC7_1680MMARC7_1674
MMAR402880 MMARC5_0954MMARC5_0531MMARC5_0953MMARC5_0954MMARC5_0953MMARC5_0922MMARC5_0954
MMAR368407 MEMAR_1070MEMAR_1069MEMAR_1071MEMAR_1070MEMAR_1071MEMAR_2172MEMAR_1070
MMAR267377 MMP0650MMP1063MMP0651MMP0650MMP0651MMP0654MMP0650
MMAG342108 AMB3507AMB3512AMB3507AMB3508AMB3509AMB3507
MLEP272631 ML1696ML1695ML1696ML1695ML1694ML1696
MLAB410358 MLAB_0605MLAB_0603MLAB_0606MLAB_0605MLAB_0606MLAB_0605
MKAN190192 MK0531MK0391MK0545MK0531MK0545MK0832MK0531
MJAN243232 MJ_0277MJ_1195MJ_0161MJ_0277MJ_0161MJ_1543MJ_0277
MHUN323259 MHUN_1242MHUN_1243MHUN_1241MHUN_1242MHUN_1241MHUN_1245MHUN_1242
MGIL350054 MFLV_4239MFLV_4238MFLV_4239MFLV_4238MFLV_4237MFLV_4239
MCAP243233 MCA_2270MCA_2275MCA_2271MCA_2270MCA_2271MCA_2272MCA_2270
MBUR259564 MBUR_0710MBUR_0711MBUR_0709MBUR_0710MBUR_0709MBUR_0708MBUR_0710
MBOV410289 BCG_3025CBCG_3024CBCG_3025CBCG_3024CBCG_3023CBCG_3025C
MBOV233413 MB3028CMB3027CMB3028CMB3027CMB3026CMB3028C
MBAR269797 MBAR_A0218MBAR_A0942MBAR_A0219MBAR_A0218MBAR_A0219MBAR_A0220MBAR_A0218
MAQU351348 MAQU_0882MAQU_2477MAQU_0883MAQU_0882MAQU_0883MAQU_0884MAQU_2114
MAER449447 MAE_50700MAE_54460MAE_48120MAE_50700MAE_48120MAE_09700MAE_50700
MAEO419665 MAEO_0682MAEO_0849MAEO_0683MAEO_0682MAEO_0683MAEO_1175MAEO_0682
MACE188937 MA3792MA4615MA3791MA3792MA3791MA3790MA3792
MABS561007 MAB_3323CMAB_3322CMAB_3323CMAB_3322CMAB_3321CMAB_3323C
LINT267671 LIC_11726LIC_11410LIC_11409LIC_11410LIC_13393LIC_12764
LINT189518 LA2202LA2569LA2570LA2569LA4241LA2570
LCHO395495 LCHO_1135LCHO_2888LCHO_2892LCHO_2893LCHO_2892LCHO_2891LCHO_2893
KPNE272620 GKPORF_B4361GKPORF_B4359GKPORF_B3430GKPORF_B4361GKPORF_B4362GKPORF_B3617GKPORF_B3431
JSP375286 MMA_0379MMA_2145MMA_2149MMA_2150MMA_2149MMA_2148
HMOD498761 HM1_1979HM1_1515HM1_1980HM1_1979HM1_1512HM1_1513HM1_1514
HINF71421 HI_1585HI_0986HI_1584HI_1585HI_1584HI_0682
HINF374930 CGSHIEE_05525CGSHIEE_07035CGSHIEE_05520CGSHIEE_05525CGSHIEE_05520CGSHIEE_08680
HINF281310 NTHI1468NTHI1160NTHI1469NTHI1468NTHI1469NTHI0804
HCHE349521 HCH_05916HCH_05908HCH_05915HCH_05916HCH_05915HCH_05914HCH_06858
HAUR316274 HAUR_4449HAUR_4446HAUR_4448HAUR_4449HAUR_4448HAUR_4449
HARS204773 HEAR0332HEAR1242HEAR1238HEAR1237HEAR1238HEAR1239
GVIO251221 GLR3279GLL2290GLL1136GLR3279GLL1136GLL2657GLR3279
GURA351605 GURA_3720GURA_3715GURA_3719GURA_3720GURA_3719GURA_3718GURA_3720
GTHE420246 GTNG_2590GTNG_2587GTNG_2589GTNG_2590GTNG_2589GTNG_2588GTNG_2590
GSUL243231 GSU_1911GSU_1906GSU_1910GSU_1911GSU_1910GSU_1909GSU_1911
GMET269799 GMET_1260GMET_1265GMET_1261GMET_1260GMET_1261GMET_1262GMET_1260
GKAU235909 GK2661GK2658GK2660GK2661GK2660GK2659GK2661
FSUC59374 FSU2908FSU3283FSU3284FSU3283FSU0727FSU3284
FSP1855 FRANEAN1_1090FRANEAN1_1091FRANEAN1_1090FRANEAN1_1091FRANEAN1_1092FRANEAN1_1090
FSP106370 FRANCCI3_3640FRANCCI3_3639FRANCCI3_3640FRANCCI3_3639FRANCCI3_3638FRANCCI3_3640
FALN326424 FRAAL5851FRAAL5850FRAAL5851FRAAL5850FRAAL5849FRAAL5851
ESP42895 ENT638_0624ENT638_0622ENT638_0026ENT638_0624ENT638_0625ENT638_4009ENT638_0025
EFER585054 EFER_0099EFER_0096EFER_3967EFER_0099EFER_0100EFER_3728EFER_3968
ECOO157 GCLLEUAILVNILVIILVHILVCILVG
ECOL83334 ECS0568ECS0078ECS4611ECS0081ECS0082ECS4708ECS4702
ECOL585397 ECED1_0528ECED1_0074ECED1_4366ECED1_0079ECED1_0080ECED1_4460ECED1_4454
ECOL585057 ECIAI39_0081ECIAI39_0079ECIAI39_4272ECIAI39_0081ECIAI39_0082ECIAI39_3012ECIAI39_4273
ECOL585056 ECUMN_0548ECUMN_0076ECUMN_4201ECUMN_0078ECUMN_0079ECUMN_4300ECUMN_4294
ECOL585055 EC55989_0522EC55989_0072EC55989_4138EC55989_0074EC55989_0075EC55989_4246EC55989_4240
ECOL585035 ECS88_0506ECS88_0079ECS88_4095ECS88_0081ECS88_0082ECS88_4197ECS88_4191
ECOL585034 ECIAI1_0510ECIAI1_0075ECIAI1_3846ECIAI1_0077ECIAI1_0078ECIAI1_3961ECIAI1_3955
ECOL481805 ECOLC_3115ECOLC_3583ECOLC_0029ECOLC_3580ECOLC_3579ECOLC_4228ECOLC_4234
ECOL469008 ECBD_3150ECBD_3542ECBD_0033ECBD_3539ECBD_3538ECBD_4265ECBD_0032
ECOL439855 ECSMS35_0550ECSMS35_0079ECSMS35_4037ECSMS35_0083ECSMS35_0084ECSMS35_4140ECSMS35_4134
ECOL413997 ECB_00457ECB_00076ECB_03554ECB_00079ECB_00080ECB_03652ECB_03555
ECOL409438 ECSE_0533ECSE_0074ECSE_3954ECSE_0079ECSE_0080ECSE_4057ECSE_4051
ECOL405955 APECO1_1507APECO1_1909APECO1_2782APECO1_1907APECO1_1906APECO1_2697APECO1_2703
ECOL364106 UTI89_C5032UTI89_C0081UTI89_C4226UTI89_C0085UTI89_C0086UTI89_C4330UTI89_C4324
ECOL362663 ECP_0568ECP_0076ECP_3877ECP_0079ECP_0080ECP_3967ECP_3962
ECOL331111 ECE24377A_0544ECE24377A_0077ECE24377A_4179ECE24377A_0079ECE24377A_0080ECE24377A_4285ECE24377A_4180
ECOL316407 ECK0500:JW0495:B0507ECK0076:JW0073:B0074ECK3661:JW3645:B3670ECK0079:JW0076:B0077ECK0080:JW0077:B0078ECK3766:JW3747:B3774ECK3662:JW3646:B3671
ECOL199310 C0622C0091C4595C0095C0096C4696C4690
ECAR218491 ECA3829ECA3831ECA3849ECA3829ECA3828ECA4221ECA3848
DVUL882 DVU_1376DVU_2981DVU_0361DVU_1376DVU_1377DVU_1378DVU_0360
DSP255470 CBDBA813CBDBA808CBDBA813CBDBA812CBDBA811CBDBA813
DSP216389 DEHABAV1_0752DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0750DEHABAV1_0752
DRED349161 DRED_0281DRED_0285DRED_2896DRED_0281DRED_0282DRED_0283DRED_0284
DPSY177439 DP2769DP2770DP2769DP2770DP0727DP2769
DHAF138119 DSY4166DSY2457DSY1366DSY1367DSY1368DSY1366
DETH243164 DET_0833DET_0830DET_0832DET_0833DET_0832DET_0831DET_0833
DDES207559 DDE_2168DDE_3218DDE_0399DDE_2168DDE_2167DDE_0398
DARO159087 DARO_1620DARO_3071DARO_1619DARO_3075DARO_3074DARO_3073DARO_1620
CVES412965 COSY_0415COSY_0412COSY_0411COSY_0412COSY_0413COSY_0411
CRUT413404 RMAG_0445RMAG_0449RMAG_0446RMAG_0445RMAG_0446RMAG_0447RMAG_0445
CPSY167879 CPS_4208CPS_3237CPS_3236CPS_3237CPS_4839CPS_4843
CPHY357809 CPHY_3171CPHY_3021CPHY_3347CPHY_3021CPHY_3020CPHY_3347
CMET456442 MBOO_1443MBOO_1442MBOO_1444MBOO_1443MBOO_1444MBOO_0481MBOO_1443
CKLU431943 CKL_2160CKL_1617CKL_1081CKL_1617CKL_1089CKL_1081
CJEJ407148 C8J_1625C8J_0537C8J_0536C8J_0537C8J_0591C8J_0536
CJEJ360109 JJD26997_2096JJD26997_1095JJD26997_1096JJD26997_1095JJD26997_1367JJD26997_1096
CJEJ354242 CJJ81176_0017CJJ81176_0603CJJ81176_0602CJJ81176_0603CJJ81176_0660CJJ81176_0602
CJEJ195099 CJE_1889CJE_0678CJE_0677CJE_0678CJE_0735CJE_0677
CJEJ192222 CJ1719CCJ0575CJ0574CJ0575CJ0632CJ0574
CHYD246194 CHY_0517CHY_0521CHY_0518CHY_0517CHY_0518CHY_0519CHY_0517
CHOM360107 CHAB381_1165CHAB381_0491CHAB381_1165CHAB381_1166CHAB381_0374CHAB381_1165
CGLU196627 CG1435CG1436CG1435CG1436CG1437CG1435
CFET360106 CFF8240_1344CFF8240_0817CFF8240_0816CFF8240_0817CFF8240_1127CFF8240_0816
CEFF196164 CE1365CE1366CE1365CE1366CE1367CE1365
CDES477974 DAUD_0352DAUD_0355DAUD_0353DAUD_0352DAUD_0353DAUD_0354DAUD_0352
CCUR360105 CCV52592_1193CCV52592_1429CCV52592_1428CCV52592_1429CCV52592_1581CCV52592_1428
CCON360104 CCC13826_0438CCC13826_0139CCC13826_0140CCC13826_0139CCC13826_2003CCC13826_0140
CAULO CC2100CC1541CC2100CC2101CC2120CC2100
BWEI315730 BCERKBAB4_1319BCERKBAB4_1322BCERKBAB4_1320BCERKBAB4_1707BCERKBAB4_1320BCERKBAB4_1707
BVIE269482 BCEP1808_1802BCEP1808_2344BCEP1808_2348BCEP1808_2349BCEP1808_2348BCEP1808_2347
BTHU412694 BALH_1252BALH_1255BALH_1253BALH_1624BALH_1253BALH_1624
BTHU281309 BT9727_1691BT9727_1284BT9727_1282BT9727_1691BT9727_1282BT9727_1693BT9727_1691
BTHA271848 BTH_I2173BTH_I1050BTH_I1046BTH_I1045BTH_I1046BTH_I1047
BSUB BSU28310BSU28280BSU28300BSU28310BSU28300BSU28310
BSP376 BRADO4946BRADO5528BRADO5564BRADO5562BRADO5559BRADO5564
BSP36773 BCEP18194_A5178BCEP18194_A5587BCEP18194_A5591BCEP18194_A5592BCEP18194_A5591BCEP18194_A5590
BSP107806 BU226BUPL04BU225BU226BU225BU599
BPUM315750 BPUM_2472BPUM_2469BPUM_2471BPUM_2472BPUM_2471BPUM_2472
BPSE320373 BURPS668_2259BURPS668_1279BURPS668_1275BURPS668_1274BURPS668_1275BURPS668_1276
BPSE320372 BURPS1710B_A2625BURPS1710B_A1505BURPS1710B_A1500BURPS1710B_A1499BURPS1710B_A1500BURPS1710B_A1501
BPSE272560 BPSL1452BPSL1201BPSL1197BPSL1196BPSL1197BPSL1198
BMAL320389 BMA10247_0396BMA10247_0401BMA10247_0397BMA10247_0396BMA10247_0397BMA10247_0398
BMAL320388 BMASAVP1_A1113BMASAVP1_A1118BMASAVP1_A1114BMASAVP1_A1113BMASAVP1_A1114BMASAVP1_A1115
BLIC279010 BL00608BL00611BL00609BL00608BL00609BL00608
BJAP224911 BLR3166BLL6435BLL6503BLL6501BLL6497BLL6503
BCLA66692 ABC2645ABC2642ABC2645ABC2644ABC2643ABC2645
BCER572264 BCA_1452BCA_1455BCA_1453BCA_1856BCA_1453BCA_1856
BCER405917 BCE_1517BCE_1520BCE_1518BCE_1934BCE_1518BCE_1934
BCER315749 BCER98_1120BCER98_1123BCER98_1121BCER98_1120BCER98_1121BCER98_1122BCER98_1120
BCER288681 BCE33L1282BCE33L1285BCE33L1283BCE33L1666BCE33L1283BCE33L1666
BCER226900 BC_1777BC_1400BC_1398BC_1777BC_1398BC_1779BC_1777
BCEN331272 BCEN2424_1878BCEN2424_2259BCEN2424_2264BCEN2424_2265BCEN2424_2264BCEN2424_2263
BCEN331271 BCEN_6201BCEN_1648BCEN_1653BCEN_1654BCEN_1653BCEN_1652
BANT592021 BAA_1919BAA_1487BAA_1485BAA_1919BAA_1485BAA_1919
BANT568206 BAMEG_2742BAMEG_3175BAMEG_3177BAMEG_2742BAMEG_3177BAMEG_2742
BANT261594 GBAA1850GBAA1420GBAA1418GBAA1850GBAA1418GBAA1850
BANT260799 BAS1714BAS1311BAS1309BAS1714BAS1309BAS1714
BAMY326423 RBAM_025370RBAM_025340RBAM_025360RBAM_025370RBAM_025360RBAM_025370
BAMB398577 BAMMC406_1787BAMMC406_2176BAMMC406_2180BAMMC406_2181BAMMC406_2180BAMMC406_2179
BAMB339670 BAMB_1815BAMB_2298BAMB_2302BAMB_2303BAMB_2302BAMB_2301
AVAR240292 AVA_2757AVA_2111AVA_2035AVA_2757AVA_2035AVA_0133AVA_2757
ASP76114 EBA7154EBB162EBA7130EBA7132EBA7134EBA4751
ASP62928 AZO3162AZO1035AZO3154AZO3155AZO3156AZO1034
ASAL382245 ASA_3404ASA_3409ASA_3403ASA_3404ASA_3403ASA_4236ASA_0119
APLE434271 APJL_0729APJL_0414APJL_0730APJL_0729APJL_0730APJL_1897APJL_0099
APLE416269 APL_0727APL_0393APL_0728APL_0727APL_0728APL_1853
AMET293826 AMET_3458AMET_3419AMET_3400AMET_3403AMET_3402AMET_3418
AMAR329726 AM1_3085AM1_0705AM1_2118AM1_3085AM1_2118AM1_3085
AHYD196024 AHA_0887AHA_0882AHA_0889AHA_0887AHA_0889AHA_0153AHA_4204
AFUL224325 AF_1720AF_0219AF_1719AF_1720AF_1719AF_1985AF_1720
AFER243159 AFE_0506AFE_2294AFE_2295AFE_2294AFE_2293AFE_2295
ADEH290397 ADEH_1978ADEH_1981ADEH_1977ADEH_1978ADEH_1977ADEH_1978
ACRY349163 ACRY_1157ACRY_0534ACRY_2832ACRY_2833ACRY_2832ACRY_2559
ACAU438753 AZC_3488AZC_3545AZC_2376AZC_2375AZC_2374AZC_2376
ABUT367737 ABU_0456ABU_1157ABU_1156ABU_1157ABU_0237ABU_1156
ABOR393595 ABO_0481ABO_0638ABO_0482ABO_0481ABO_0482ABO_0485
AAEO224324 AQ_451AQ_2090AQ_451AQ_1851AQ_1245AQ_451


Organism features enriched in list (features available for 268 out of the 280 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00041552892
Arrangment:Filaments 0.0046728910
Disease:Bubonic_plague 0.009152366
Disease:Dysentery 0.009152366
Disease:Food_poisoning 0.000851599
Disease:Gastroenteritis 0.00003481313
Disease:None 0.00184883758
Endospores:No 0.000537279211
GC_Content_Range4:0-40 9.894e-1554213
GC_Content_Range4:40-60 2.983e-9137224
GC_Content_Range7:0-30 7.717e-10347
GC_Content_Range7:30-40 1.179e-651166
GC_Content_Range7:40-50 0.000144171117
GC_Content_Range7:50-60 0.000130466107
Genome_Size_Range5:0-2 4.110e-1039155
Genome_Size_Range5:2-4 0.000012467197
Genome_Size_Range5:4-6 9.740e-16129184
Genome_Size_Range5:6-10 0.00028823347
Genome_Size_Range9:0-1 0.0000106227
Genome_Size_Range9:1-2 4.338e-637128
Genome_Size_Range9:2-3 0.000069037120
Genome_Size_Range9:4-5 4.424e-66496
Genome_Size_Range9:5-6 6.606e-96588
Genome_Size_Range9:6-8 0.00222512638
Gram_Stain:Gram_Pos 0.001309154150
Habitat:Aquatic 2.091e-66291
Habitat:Host-associated 4.710e-1354206
Habitat:Terrestrial 0.00077022331
Motility:No 0.001030754151
Motility:Yes 1.889e-7153267
Optimal_temp.:- 0.0000230142257
Optimal_temp.:37 0.005910338106
Oxygen_Req:Aerobic 0.000058064185
Oxygen_Req:Microaerophilic 0.00444261418
Pathogenic_in:Human 0.000571380213
Pathogenic_in:No 0.0003396123226
Shape:Coccus 1.753e-111182
Shape:Rod 0.0001621180347
Shape:Sphere 0.0008894219
Temp._range:Psychrophilic 0.000851599



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 156
Effective number of orgs (counting one per cluster within 468 clusters): 111

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PACN267747 ncbi Propionibacterium acnes KPA1712021
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MXAN246197 ncbi Myxococcus xanthus DK 16220
MSYN262723 ncbi Mycoplasma synoviae 530
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDIF272563 ncbi Clostridium difficile 6301
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BQUI283165 ncbi Bartonella quintana Toulouse1
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5831
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0


Names of the homologs of the genes in the group in each of these orgs
  EG11583   EG11226   EG10502   EG10500   EG10499   EG10495   EG10494   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TLET416591
TKOD69014
TDEN243275
TACI273075
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAGA211110
SAGA208435
SAGA205921
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_2433
RAKA293614
PRUM264731 GFRORF0729
PPEN278197
PINT246198
PHOR70601
PGIN242619
PDIS435591 BDI_2064
PAST100379
PACN267747 PPA1372
OTSU357244
NSEN222891
MXAN246197
MSYN262723
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
ILOI283942
HSP64091
HSAL478009
HPYL85963 JHP0313
HPYL357544 HPAG1_0334
HPY HP0330
HDUC233412
HBUT415426
HACI382638 HAC_0990
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DNOD246195
CTRA471473
CTRA471472
CTET212717
CSUL444179 SMGWSS_043
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CNOV386415
CMUR243161
CMAQ397948 CMAQ_1171
CFEL264202
CDIF272563 CD1565
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CABO218497
BXEN266265
BTUR314724
BTHE226186 BT_1861
BQUI283165 BQ08540
BHER314723
BGAR290434
BFRA295405 BF3448
BFRA272559 BF3267
BCIC186490
BBUR224326
BBAC360095 BARBAKC583_0917
BBAC264462
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557
AORE350688
AMAR234826
ALAI441768


Organism features enriched in list (features available for 145 out of the 156 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00352993392
Arrangment:Pairs 0.001203116112
Disease:Botulism 0.000903055
Disease:Legionnaire's_disease 0.003708244
Disease:None 0.0001902458
Disease:Pharyngitis 0.000012688
Disease:Tularemia 0.000903055
Disease:Wide_range_of_infections 1.679e-71111
Disease:bronchitis_and_pneumonitis 0.000012688
GC_Content_Range4:0-40 5.250e-22102213
GC_Content_Range4:40-60 0.000309939224
GC_Content_Range4:60-100 5.913e-164145
GC_Content_Range7:0-30 6.754e-153647
GC_Content_Range7:30-40 1.792e-766166
GC_Content_Range7:50-60 7.625e-87107
GC_Content_Range7:60-70 2.876e-144134
Genome_Size_Range5:0-2 5.612e-3497155
Genome_Size_Range5:2-4 0.004063737197
Genome_Size_Range5:4-6 8.498e-188184
Genome_Size_Range5:6-10 0.0006030347
Genome_Size_Range9:0-1 4.222e-92127
Genome_Size_Range9:1-2 4.072e-2276128
Genome_Size_Range9:4-5 2.782e-7696
Genome_Size_Range9:5-6 6.466e-10288
Genome_Size_Range9:6-8 0.0001722138
Habitat:Aquatic 1.866e-7591
Habitat:Host-associated 3.757e-1591206
Habitat:Multiple 0.001670431178
Habitat:Terrestrial 0.0062404231
Motility:Yes 2.504e-643267
Optimal_temp.:37 2.768e-1053106
Oxygen_Req:Anaerobic 0.009923634102
Pathogenic_in:Animal 0.00489082566
Pathogenic_in:Human 2.348e-983213
Pathogenic_in:No 4.863e-1026226
Salinity:Non-halophilic 0.003426237106
Shape:Sphere 6.674e-71519



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 47
Effective number of orgs (counting one per cluster within 468 clusters): 46

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MKAN190192 ncbi Methanopyrus kandleri AV19 1.366e-62907
MAEO419665 ncbi Methanococcus aeolicus Nankai-3 4.567e-63447
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 2661 7.786e-63717
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H 9.747e-63837
MTHE349307 ncbi Methanosaeta thermophila PT 0.00001303997
MMAR267377 ncbi Methanococcus maripaludis S2 0.00001584107
CMET456442 ncbi Candidatus Methanoregula boonei 6A8 0.00001604117
MMAR402880 ncbi Methanococcus maripaludis C5 0.00001784177
MMAR444158 ncbi Methanococcus maripaludis C6 0.00001904217
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 0.00003714637
MMAR368407 ncbi Methanoculleus marisnigri JR1 0.00004864817
MHUN323259 ncbi Methanospirillum hungatei JF-1 0.00005154857
AFUL224325 ncbi Archaeoglobus fulgidus DSM 4304 0.00006034967
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00010835397
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 0.00012015477
PMAR167555 ncbi Prochlorococcus marinus NATL1A 0.00012485507
UMET351160 ncbi uncultured methanogenic archaeon RC-I 0.00015095657
DETH243164 ncbi Dehalococcoides ethenogenes 195 0.00016865747
MMAZ192952 ncbi Methanosarcina mazei Go1 0.00023036007
MBAR269797 ncbi Methanosarcina barkeri Fusaro 0.00031036267
PMAR74547 ncbi Prochlorococcus marinus MIT 9313 0.00037886447
MACE188937 ncbi Methanosarcina acetivorans C2A 0.00041776537
MLAB410358 ncbi Methanocorpusculum labreanum Z 0.00055353636
SSP64471 ncbi Synechococcus sp. CC9311 0.00079817167
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00115877557
MMAR426368 ncbi Methanococcus maripaludis C7 0.00130384196
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00175578017
NSP387092 ncbi Nitratiruptor sp. SB155-2 0.00180248047
MLEP272631 ncbi Mycobacterium leprae TN 0.00271854746
PMAR167540 Prochlorococcus marinus pastoris MED4ax 0.00300314826
SSP387093 ncbi Sulfurovum sp. NBC37-1 0.00313748707
WSUC273121 ncbi Wolinella succinogenes DSM 1740 0.00321428737
PMAR167542 ncbi Prochlorococcus marinus MIT 9515 0.00327204896
PMAR146891 ncbi Prochlorococcus marinus AS9601 0.00331204906
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00351814956
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00396225056
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00429995126
SELO269084 ncbi Synechococcus elongatus PCC 6301 0.00548409427
TERY203124 ncbi Trichodesmium erythraeum IMS101 0.00569179477
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.00581959507
TTHE300852 ncbi Thermus thermophilus HB8 0.00599389547
TTHE262724 ncbi Thermus thermophilus HB27 0.00626359607
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.00630959617
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen 0.00663949687
MAER449447 ncbi Microcystis aeruginosa NIES-843 0.00734379827
MSTA339860 ncbi Methanosphaera stadtmanae DSM 3091 0.00759972995
DSP216389 ncbi Dehalococcoides sp. BAV1 0.00948075856


Names of the homologs of the genes in the group in each of these orgs
  EG11583   EG11226   EG10502   EG10500   EG10499   EG10495   EG10494   
MKAN190192 MK0531MK0391MK0545MK0531MK0545MK0832MK0531
MAEO419665 MAEO_0682MAEO_0849MAEO_0683MAEO_0682MAEO_0683MAEO_1175MAEO_0682
MJAN243232 MJ_0277MJ_1195MJ_0161MJ_0277MJ_0161MJ_1543MJ_0277
MTHE187420 MTH1444MTH1481MTH1443MTH1444MTH1443MTH1442MTH1444
MTHE349307 MTHE_0110MTHE_1298MTHE_0111MTHE_0110MTHE_0111MTHE_0112MTHE_0110
MMAR267377 MMP0650MMP1063MMP0651MMP0650MMP0651MMP0654MMP0650
CMET456442 MBOO_1443MBOO_1442MBOO_1444MBOO_1443MBOO_1444MBOO_0481MBOO_1443
MMAR402880 MMARC5_0954MMARC5_0531MMARC5_0953MMARC5_0954MMARC5_0953MMARC5_0922MMARC5_0954
MMAR444158 MMARC6_0239MMARC6_1596MMARC6_0238MMARC6_0239MMARC6_0238MMARC6_0233MMARC6_0239
MBUR259564 MBUR_0710MBUR_0711MBUR_0709MBUR_0710MBUR_0709MBUR_0708MBUR_0710
MMAR368407 MEMAR_1070MEMAR_1069MEMAR_1071MEMAR_1070MEMAR_1071MEMAR_2172MEMAR_1070
MHUN323259 MHUN_1242MHUN_1243MHUN_1241MHUN_1242MHUN_1241MHUN_1245MHUN_1242
AFUL224325 AF_1720AF_0219AF_1719AF_1720AF_1719AF_1985AF_1720
PMAR59920 PMN2A_1858PMN2A_0686PMN2A_0764PMN2A_1858PMN2A_0764PMN2A_0881PMN2A_1858
PMAR167539 PRO_0526PRO_1134PRO_1251PRO_0526PRO_1251PRO_1389PRO_0526
PMAR167555 NATL1_05831NATL1_15201NATL1_16041NATL1_05831NATL1_16041NATL1_17361NATL1_05831
UMET351160 LRC534RCIX673LRC533LRC534LRC533LRC519LRC534
DETH243164 DET_0833DET_0830DET_0832DET_0833DET_0832DET_0831DET_0833
MMAZ192952 MM0670MM1284MM0669MM0670MM0669MM0668MM0670
MBAR269797 MBAR_A0218MBAR_A0942MBAR_A0219MBAR_A0218MBAR_A0219MBAR_A0220MBAR_A0218
PMAR74547 PMT1239PMT1121PMT1176PMT1239PMT1176PMT0313PMT1239
MACE188937 MA3792MA4615MA3791MA3792MA3791MA3790MA3792
MLAB410358 MLAB_0605MLAB_0603MLAB_0606MLAB_0605MLAB_0606MLAB_0605
SSP64471 GSYN2129GSYN1052GSYN0962GSYN2129GSYN0962GSYN0766GSYN2129
CRUT413404 RMAG_0445RMAG_0449RMAG_0446RMAG_0445RMAG_0446RMAG_0447RMAG_0445
MMAR426368 MMARC7_1674MMARC7_0316MMARC7_1675MMARC7_1675MMARC7_1680MMARC7_1674
PMOB403833 PMOB_1592PMOB_1589PMOB_1591PMOB_1592PMOB_1591PMOB_1590PMOB_1592
NSP387092 NIS_0810NIS_1407NIS_0811NIS_0810NIS_0811NIS_1161NIS_0810
MLEP272631 ML1696ML1695ML1696ML1695ML1694ML1696
PMAR167540 PMM1066PMM1154PMM0526PMM1154PMM1315PMM0526
SSP387093 SUN_1823SUN_1956SUN_1822SUN_1823SUN_1822SUN_0443SUN_1823
WSUC273121 WS0103WS0624WS0102WS0103WS0102WS1878WS0103
PMAR167542 P9515ORF_1208P9515ORF_1381P9515ORF_0626P9515ORF_1381P9515ORF_1543P9515ORF_0626
PMAR146891 A9601_11711A9601_13311A9601_05821A9601_13311A9601_15141A9601_05821
PMAR167546 P9301ORF_1193P9301ORF_1367P9301ORF_0565P9301ORF_1367P9301ORF_1528P9301ORF_0565
PMAR74546 PMT9312_1077PMT9312_1253PMT9312_0526PMT9312_1253PMT9312_1412PMT9312_0526
PMAR93060 P9215_12011P9215_13601P9215_06071P9215_13601P9215_15441P9215_06071
SELO269084 SYC1366_CSYC0145_DSYC1672_CSYC1366_CSYC1672_CSYC0010_CSYC1366_C
TERY203124 TERY_2843TERY_2253TERY_1850TERY_2843TERY_1850TERY_4335TERY_2843
SSP321327 CYA_2073CYA_2223CYA_2130CYA_2073CYA_2130CYA_0246CYA_2073
TTHE300852 TTHA1213TTHA1210TTHA1212TTHA1213TTHA1212TTHA1211TTHA1213
TTHE262724 TT_C0852TT_C0849TT_C0851TT_C0852TT_C0851TT_C0850TT_C0852
CDES477974 DAUD_0352DAUD_0355DAUD_0353DAUD_0352DAUD_0353DAUD_0354DAUD_0352
SWOL335541 SWOL_2146SWOL_2143SWOL_2145SWOL_2146SWOL_2145SWOL_2144SWOL_2146
MAER449447 MAE_50700MAE_54460MAE_48120MAE_50700MAE_48120MAE_09700MAE_50700
MSTA339860 MSP_0029MSP_0199MSP_0028MSP_0028MSP_0022
DSP216389 DEHABAV1_0752DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0750DEHABAV1_0752


Organism features enriched in list (features available for 46 out of the 47 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.000233159
Arrangment:Pairs 0.00931893112
Genome_Size_Range5:0-2 0.000240023155
Genome_Size_Range5:4-6 0.00012544184
Genome_Size_Range9:1-2 8.464e-623128
Genome_Size_Range9:4-5 0.0084609296
Gram_Stain:Gram_Neg 0.000027513333
Gram_Stain:Gram_Pos 0.00050593150
Habitat:Aquatic 1.131e-92491
Habitat:Host-associated 0.00001594206
Habitat:Multiple 0.00085325178
Optimal_temp.:- 0.007359228257
Optimal_temp.:35-40 0.000462033
Oxygen_Req:Aerobic 0.00048835185
Oxygen_Req:Anaerobic 1.558e-824102
Oxygen_Req:Facultative 4.811e-72201
Pathogenic_in:Human 1.216e-72213
Pathogenic_in:No 8.073e-632226
Shape:Irregular_coccus 1.873e-91117
Shape:Oval 0.000158845
Shape:Rod 8.596e-99347
Temp._range:Mesophilic 0.003713830473



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832400.4500
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652310.4386
PWY-5340 (sulfate activation for sulfonation)3852380.4315
PWY0-901 (selenocysteine biosynthesis I (bacteria))2301660.4188
HISTSYN-PWY (histidine biosynthesis)4992760.4181



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11226   EG10502   EG10500   EG10499   EG10495   EG10494   
EG115830.9995050.9998790.9999670.999950.9996840.999872
EG112260.9995470.9996520.9997320.9995680.999398
EG105020.9999660.9999940.9998560.999868
EG1050010.9998930.999972
EG104990.9999480.999938
EG104950.999824
EG10494



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PAIRWISE BLAST SCORES:

  EG11583   EG11226   EG10502   EG10500   EG10499   EG10495   EG10494   
EG115830.0f0--2.4e-79---
EG11226-0.0f0-----
EG10502--0.0f0-9.4e-7--
EG10500---0.0f0---
EG10499----0.0f0--
EG10495-----0.0f0-
EG10494------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.286, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9999 0.9995 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9999 0.9997 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9999 0.9997 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9998 0.9995 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.857, average score: 0.935)
  Genes in pathway or complex:
             0.9989 0.9981 EG11575 (leuD) LEUD-MONOMER (LeuD)
             0.9989 0.9982 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.5949 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.9989 0.9981 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9565 0.8579 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7707 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9999 0.9995 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9999 0.9997 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9999 0.9997 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9998 0.9996 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9969 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9995 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- THREOCAT-PWY (superpathway of threonine metabolism) (degree of match pw to cand: 0.208, degree of match cand to pw: 0.714, average score: 0.637)
  Genes in pathway or complex:
             0.4405 0.1415 M014 (mhpF) MHPF-MONOMER (acetaldehyde dehydrogenase 2)
             0.2506 0.0533 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4630 0.1932 G6455 (ltaE) LTAA-MONOMER (LtaA)
             0.7018 0.1618 EG13139 (tynA) AMINEOXID-MONOMER (TynA)
             0.6709 0.3292 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
             0.7019 0.3808 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.7818 0.4682 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.5451 0.1092 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.3783 0.1298 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.3937 0.1241 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.9628 0.8625 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
             0.9565 0.8579 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7707 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9999 0.9995 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9999 0.9997 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9999 0.9997 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9998 0.9996 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9969 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.8238 0.6423 EG11904 (gldA) GLYCDEH-MONOMER (GldA)
             0.8325 0.5870 EG10993 (tdh) THREODEHYD-MONOMER (Tdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9998 0.9995 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- VALSYN-PWY (valine biosynthesis) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.714, average score: 0.972)
  Genes in pathway or complex:
             0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9969 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9998 0.9996 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9999 0.9995 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7707 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9999 0.9997 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9999 0.9997 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9998 0.9995 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.286, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9999 0.9997 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9999 0.9997 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9998 0.9996 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9999 0.9995 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9998 0.9995 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- ILEUSYN-PWY (isoleucine biosynthesis I (from threonine)) (degree of match pw to cand: 0.455, degree of match cand to pw: 0.714, average score: 0.973)
  Genes in pathway or complex:
             0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9969 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9998 0.9996 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9999 0.9997 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9999 0.9997 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9999 0.9995 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7707 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9565 0.8579 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9998 0.9995 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10499 EG10500 (centered at EG10499)
EG11583 (centered at EG11583)
EG11226 (centered at EG11226)
EG10495 (centered at EG10495)
EG10494 EG10502 (centered at EG10494)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11583   EG11226   EG10502   EG10500   EG10499   EG10495   EG10494   
322/623373/623329/623387/623410/623417/623344/623
AAEO224324:0:Tyes01148-09815460
AAUR290340:2:Tyes986-1210-
AAVE397945:0:Tyes-03432-
ABAC204669:0:Tyes-0--189188190
ABAU360910:0:Tyes2-1210-
ABOR393595:0:Tyes01591014-
ABUT367737:0:Tyes-2199189179180917
ACAU438753:0:Tyes11221180-2102
ACEL351607:0:Tyes0-101-0
ACRY349163:8:Tyes62102310231123102034-
ADEH290397:0:Tyes14010-1
AEHR187272:0:Tyes-80-01-
AFER243159:0:Tyes-017591760175917581760
AFUL224325:0:Tyes1482014811482148117391482
AHYD196024:0:Tyes71370871571371503906
AMAR329726:9:Tyes23550139723551397-2355
AMET293826:0:Tyes-581903218
ANAE240017:0:Tyes--0-01-
APLE416269:0:Tyes33203333323331505-
APLE434271:0:Tno59630559759659718170
ASAL382245:5:Tyes3159316431583159315839730
ASP1667:3:Tyes1161-1210-
ASP232721:2:Tyes-51012-
ASP62928:0:Tyes-215712149215021510
ASP62977:0:Tyes--1210-
ASP76114:2:Tyes-138511371137213730
AVAR240292:3:Tyes2636199119152636191502636
BABO262698:1:Tno9--9809
BAMB339670:3:Tno0504508509508507-
BAMB398577:3:Tno0403407408407406-
BAMY326423:0:Tyes30232-3
BANT260799:0:Tno401204010-401
BANT261594:2:Tno393203930-393
BANT568206:2:Tyes04224240424-0
BANT592021:2:Tno423204230-423
BAPH198804:0:Tyes1-010355-
BAPH372461:0:Tyes---10247-
BBAC360095:0:Tyes-----0-
BBRO257310:0:Tyes2-1109810-
BCAN483179:1:Tno10--109010
BCEN331271:0:Tno0------
BCEN331271:2:Tno-05654-
BCEN331272:3:Tyes0381386387386385-
BCER226900:1:Tyes373203730374373
BCER288681:0:Tno0313801-380
BCER315749:1:Tyes0310120
BCER405917:1:Tyes0313981-398
BCER572264:1:Tno0313931-393
BCLA66692:0:Tyes30-3213
BFRA272559:1:Tyes-0-----
BFRA295405:0:Tno-0-----
BHAL272558:0:Tyes-02-21-
BHEN283166:0:Tyes---3-03
BJAP224911:0:Fyes03291-3359335733533359
BLIC279010:0:Tyes30232-3
BLON206672:0:Tyes--0-0229-
BMAL243160:1:Tno2-1210-
BMAL320388:1:Tno051012-
BMAL320389:1:Tyes051012-
BMEL224914:1:Tno0--0170
BMEL359391:1:Tno9--9809
BOVI236:1:Tyes8--8708
BPAR257311:0:Tno2-192710-
BPER257313:0:Tyes0-1012-
BPET94624:0:Tyes0-1012-
BPSE272560:1:Tyes26851012-
BPSE320372:1:Tno110961012-
BPSE320373:1:Tno95251012-
BPUM315750:0:Tyes30232-3
BQUI283165:0:Tyes-----0-
BSP107806:1:Tyes-0-----
BSP107806:2:Tyes1-010368-
BSP36773:2:Tyes0426430431430429-
BSP376:0:Tyes0555-590588585590
BSUB:0:Tyes30232-3
BSUI204722:1:Tyes9--9809
BSUI470137:1:Tno9--9809
BTHA271848:1:Tno109751012-
BTHE226186:0:Tyes-0-----
BTHU281309:1:Tno407204070409407
BTHU412694:1:Tno0313511-351
BTRI382640:1:Tyes---7-07
BVIE269482:7:Tyes0537541542541540-
BWEI315730:4:Tyes0313801-380
CACE272562:1:Tyes--7-7-0
CAULO:0:Tyes5630-563564583563
CBEI290402:0:Tyes--2400-062399
CBLO203907:0:Tyes-0---451456
CBLO291272:0:Tno-0---463468
CBOT508765:1:Tyes--368-0-369
CCHL340177:0:Tyes3--3103
CCON360104:2:Tyes-5821014570
CCUR360105:0:Tyes-0525524525288524
CDES477974:0:Tyes0310120
CDIF272563:1:Tyes-----0-
CDIP257309:0:Tyes0--0120
CEFF196164:0:Fyes0-10120
CFET360106:0:Tyes-5171013090
CGLU196627:0:Tyes0-10120
CHOM360107:1:Tyes774111-7747750774
CHUT269798:0:Tyes-2554---0-
CHYD246194:0:Tyes0410120
CJAP155077:0:Tyes0-1014-
CJEI306537:0:Tyes2--2102
CJEJ192222:0:Tyes-1121101580
CJEJ195099:0:Tno-1170101570
CJEJ354242:2:Tyes-1075101560
CJEJ360109:0:Tyes-9300102511
CJEJ407148:0:Tno-1121101550
CKLU431943:1:Tyes-1072536053680
CKOR374847:0:Tyes-0---440-
CMAQ397948:0:Tyes-0-----
CMET456442:0:Tyes9859849869859860985
CMIC31964:2:Tyes0-101-0
CMIC443906:2:Tyes0-101-0
CPEL335992:0:Tyes21384-2-0-
CPHY357809:0:Tyes-149132310323
CPSY167879:0:Tyes-93210115521556
CRUT413404:0:Tyes0410120
CSAL290398:0:Tyes--1013-
CSP501479:7:Fyes-0-----
CSP501479:8:Fyes0--01-0
CSP78:2:Tyes-0-1885188719151885
CSUL444179:0:Tyes-0-----
CTEP194439:0:Tyes2--2102
CVES412965:0:Tyes-410120
CVIO243365:0:Tyes-91012-
DARO159087:0:Tyes1145601460145914581
DDES207559:0:Tyes18002868118001799-0
DETH243164:0:Tyes3023213
DGEO319795:0:Tyes0------
DGEO319795:1:Tyes-02-2-3
DHAF138119:0:Tyes2834-11170120
DOLE96561:0:Tyes04101--
DPSY177439:2:Tyes2103-21042103210402103
DRAD243230:3:Tyes-0----33
DRED349161:0:Tyes0426300123
DSHI398580:5:Tyes-0-12001202--
DSP216389:0:Tyes30-3213
DSP255470:0:Tno30-3213
DVUL882:1:Tyes1011260711011101210130
ECAR218491:0:Tyes13221040721
ECOL199310:0:Tno512044115645104504
ECOL316407:0:Tno424035233434193522
ECOL331111:6:Tno446039392340403940
ECOL362663:0:Tno487037923438803875
ECOL364106:1:Tno4928041314542324226
ECOL405955:2:Tyes406036582337453739
ECOL409438:6:Tyes467039515640604054
ECOL413997:0:Tno386034983436003499
ECOL439855:4:Tno457038374539323926
ECOL469008:0:Tno3102350213499349842350
ECOL481805:0:Tno3098356703564356342264232
ECOL585034:0:Tno431037244538343828
ECOL585035:0:Tno418038873439833977
ECOL585055:0:Tno446040154541224116
ECOL585056:2:Tno475041253542284222
ECOL585057:0:Tno4041954529374196
ECOL585397:0:Tno432041614542584252
ECOL83334:0:Tno499046353447384732
ECOLI:0:Tno434036643437703665
ECOO157:0:Tno495046543447564750
EFER585054:1:Tyes3038283436093829
ELIT314225:0:Tyes---2102
ESP42895:1:Tyes611609161161240290
FALN326424:0:Tyes2-12102
FJOH376686:0:Tyes-5---02
FSP106370:0:Tyes2-12102
FSP1855:0:Tyes0-10120
FSUC59374:0:Tyes-211724832484248302484
GBET391165:0:Tyes-0-986-
GFOR411154:0:Tyes170---1517
GKAU235909:1:Tyes3023213
GMET269799:1:Tyes0510120
GOXY290633:5:Tyes-637-012-
GSUL243231:0:Tyes5045435
GTHE420246:1:Tyes3023213
GURA351605:0:Tyes5045435
GVIO251221:0:Tyes2172117002172015422172
HACI382638:1:Tyes-----0-
HARS204773:0:Tyes0857853852853854-
HAUR316274:2:Tyes30232-3
HCHE349521:0:Tyes1101011109929
HHAL349124:0:Tyes-04-43-
HHEP235279:0:Tyes--0103541
HINF281310:0:Tyes5853215865855860-
HINF374930:0:Tyes1262010561-
HINF71421:0:Tno8863028858868850-
HMAR272569:8:Tyes-12391-120
HMOD498761:0:Tyes4653466465012
HMUK485914:1:Tyes-02636-26362637-
HNEP81032:0:Tyes-0-119-11
HPY:0:Tno-----0-
HPYL357544:1:Tyes-----0-
HPYL85963:0:Tno-----0-
HSOM205914:1:Tyes-249---15230
HSOM228400:0:Tno-717---18410
HWAL362976:1:Tyes-01365-1365--
IHOS453591:0:Tyes-380---0-
JSP290400:1:Tyes-1777-40-4
JSP375286:0:Tyes017971801180218011800-
KPNE272620:2:Tyes89389108938941761
KRAD266940:2:Fyes1-0-0-1
LBIF355278:2:Tyes-10991592-159201593
LBIF456481:2:Tno-11281638-163801639
LBOR355276:1:Tyes-1302891-8910890
LBOR355277:1:Tno-2461-116400
LCHO395495:0:Tyes0177817821783178217811783
LINN272626:1:Tno-3-01-0
LINT189518:1:Tyes-03713723712058372
LINT267671:1:Tno-31010119461327
LLAC272622:5:Tyes213-2-02
LLAC272623:0:Tyes----01-
LMES203120:1:Tyes-74---0-
LMON169963:0:Tno-3-01-0
LMON265669:0:Tyes-3-01-0
LSPH444177:1:Tyes30-32-3
LWEL386043:0:Tyes-3-01-0
LXYL281090:0:Tyes1-010--
MABS561007:1:Tyes2-12102
MACE188937:0:Tyes281312102
MAEO419665:0:Tyes01651014860
MAER449447:0:Tyes4137451538754137387504137
MAQU351348:2:Tyes0157410121215
MAVI243243:0:Tyes--1-10-
MBAR269797:1:Tyes072510120
MBOV233413:0:Tno2-12102
MBOV410289:0:Tno2-12102
MBUR259564:0:Tyes2312102
MCAP243233:0:Tyes0410120
MEXT419610:0:Tyes-2403-4590459204590
MFLA265072:0:Tyes-01600159916001601-
MGIL350054:3:Tyes2-12102
MHUN323259:0:Tyes1201041
MJAN243232:2:Tyes1211060012101421121
MKAN190192:0:Tyes1430157143157452143
MLAB410358:0:Tyes20323-2
MLEP272631:0:Tyes2-12102
MLOT266835:2:Tyes0--944943923944
MMAG342108:0:Tyes05-0120
MMAR267377:0:Tyes041610140
MMAR368407:0:Tyes1021211231
MMAR394221:0:Tyes-0----2
MMAR402880:1:Tyes4150414415414383415
MMAR426368:0:Tyes139001391-139113941390
MMAR444158:0:Tyes6139756506
MMAZ192952:0:Tyes263512102
MPET420662:1:Tyes40-432-
MSED399549:0:Tyes-0---1288-
MSME246196:0:Tyes3073-10120
MSP164756:1:Tno0-10120
MSP164757:0:Tno0-10120
MSP189918:2:Tyes0-10120
MSP266779:3:Tyes0--0180
MSP400668:0:Tyes--1012578-
MSP409:2:Tyes-1158-1030211
MSTA339860:0:Tyes71776-60-
MSUC221988:0:Tyes131957713181319131802247
MTBCDC:0:Tno2-12102
MTBRV:0:Tno2-12102
MTHE187420:0:Tyes23912102
MTHE264732:0:Tyes8828798818828810882
MTHE349307:0:Tyes0116610120
MTUB336982:0:Tno2-12102
MTUB419947:0:Tyes2-12102
MVAN350058:0:Tyes0-10120
NARO279238:0:Tyes---0120
NEUR228410:0:Tyes504543-
NEUT335283:2:Tyes17016171615-
NFAR247156:2:Tyes1237-12361237123612350
NGON242231:0:Tyes-0341342341339-
NHAM323097:2:Tyes70-7657
NMEN122586:0:Tno-0479480479477-
NMEN122587:0:Tyes-0463464463461-
NMEN272831:0:Tno-0386387386384-
NMEN374833:0:Tno-0486487486484-
NMUL323848:3:Tyes-020212019-
NOCE323261:1:Tyes403432-
NPHA348780:2:Tyes-0792-792--
NSP103690:6:Tyes2320255123342320233402320
NSP35761:1:Tyes2-12102
NSP387092:0:Tyes06011013500
NWIN323098:0:Tyes50-5435
OANT439375:5:Tyes0--1368136913771368
OCAR504832:0:Tyes12716-0120
OIHE221109:0:Tyes30232-3
PABY272844:0:Tyes02---1-
PACN267747:0:Tyes-----0-
PAER178306:0:Tyes-0---993-
PAER208963:0:Tyes0-14311432143114301432
PAER208964:0:Tno0-32393240323932383240
PARC259536:0:Tyes0-10120
PARS340102:0:Tyes-347---0-
PATL342610:0:Tyes026731013663-
PCAR338963:0:Tyes302326143
PCRY335284:1:Tyes0-10120
PDIS435591:0:Tyes-0-----
PENT384676:0:Tyes0-28692870286928682870
PFLU205922:0:Tyes0-32333234323332323234
PFLU216595:1:Tyes0-3282328332823281-
PFLU220664:0:Tyes0-34953496349534943496
PFUR186497:0:Tyes02---1-
PHAL326442:0:Tyes--010--
PHAL326442:1:Tyes-2073---01962
PING357804:0:Tyes30350303630353036616131
PISL384616:0:Tyes-1233---0-
PLUM243265:0:Fyes1801010221039
PLUT319225:0:Tyes-0-6326
PMAR146891:0:Tyes-58874807489300
PMAR167539:0:Tyes061773407348780
PMAR167540:0:Tyes-54663706378040
PMAR167542:0:Tyes-57975007509060
PMAR167546:0:Tyes-62479507959510
PMAR167555:0:Tyes094210260102611630
PMAR59920:0:Tno12000781200782011200
PMAR74546:0:Tyes-55573507359020
PMAR74547:0:Tyes9358188729358720935
PMAR93060:0:Tyes-59976007609490
PMEN399739:0:Tyes181201817182017
PMOB403833:0:Tyes3023213
PMUL272843:1:Tyes11093010415759
PNAP365044:8:Tyes-41012-
PPRO298386:2:Tyes218533434134034103496
PPUT160488:0:Tno0-379380379378-
PPUT351746:0:Tyes0-29822983298229812983
PPUT76869:0:Tno0-829830829828-
PRUM264731:0:Tyes-0-----
PSP117:0:Tyes-16051-101690
PSP296591:2:Tyes222751012-
PSP312153:0:Tyes504543-
PSP56811:2:Tyes0-1012-
PSTU379731:0:Tyes0126143144143142-
PSYR205918:0:Tyes0-1012-
PSYR223283:2:Tyes0-1012-
PTHE370438:0:Tyes342090120
PTOR263820:0:Tyes-0---164-
RALB246199:0:Tyes--0----
RCAS383372:0:Tyes403-32-
RDEN375451:4:Tyes-0-15001501--
RETL347834:5:Tyes45--4544045
REUT264198:3:Tyes237161012-
REUT381666:2:Tyes247961012-
RFER338969:1:Tyes9770978977978979-
RLEG216596:6:Tyes40--4039040
RMET266264:2:Tyes252371012-
RPAL258594:0:Tyes015-0140
RPAL316055:0:Tyes020-0260
RPAL316056:0:Tyes200-20181320
RPAL316057:0:Tyes014-0240
RPAL316058:0:Tyes150-15141115
RPOM246200:1:Tyes-0-21072108-2107
RRUB269796:1:Tyes---0120
RSAL288705:0:Tyes0-101--
RSOL267608:1:Tyes123304543-
RSP101510:3:Fyes0-32583257325832593257
RSP357808:0:Tyes302-21-
RSPH272943:4:Tyes-0-309308-309
RSPH349101:2:Tno2900-290289-290
RSPH349102:5:Tyes1418-10--
RXYL266117:0:Tyes0273-----
SACI330779:0:Tyes-0---594-
SACI56780:0:Tyes4040403404--404
SALA317655:1:Tyes--10120
SARE391037:0:Tyes0-10120
SAUR158878:1:Tno-3---20
SAUR158879:1:Tno-3---20
SAUR196620:0:Tno-3---20
SAUR273036:0:Tno-3---20
SAUR282458:0:Tno-2---10
SAUR282459:0:Tno-2---10
SAUR359786:1:Tno-3---20
SAUR359787:1:Tno-3---20
SAUR367830:3:Tno-3---20
SAUR418127:0:Tyes-3---20
SAUR426430:0:Tno-2---10
SAUR93061:0:Fno-3---20
SAUR93062:1:Tno-3---20
SAVE227882:1:Fyes0-713714713712714
SBAL399599:3:Tyes2127021282127212838263825
SBAL402882:1:Tno2003020042003200436913690
SBOY300268:1:Tyes327034423435193513
SCO:2:Fyes691-10116370
SDEG203122:0:Tyes25024252420-
SDEN318161:0:Tyes-018321831183231513150
SDYS300267:1:Tyes275038015636373802
SELO269084:0:Tyes138313817041383170401383
SENT209261:0:Tno2115034503431273449
SENT220341:0:Tno393035043431803503
SENT295319:0:Tno2002033893434873479
SENT321314:2:Tno4036664537693667
SENT454169:2:Tno484038632339703962
SEPI176279:1:Tyes-3-0-20
SEPI176280:0:Tno-3-0-20
SERY405948:0:Tyes571-12102
SFLE198214:0:Tyes376035883436493643
SFLE373384:0:Tno392035782334753577
SFUM335543:0:Tyes2691026892691269226932690
SGLO343509:3:Tyes-0---20022008
SGOR29390:0:Tyes0365-012-
SHAE279808:0:Tyes-0---1-
SHAL458817:0:Tyes2025020262025202636063605
SHIGELLA:0:Tno369034673434073468
SLAC55218:1:Fyes-0-19491948-1949
SLOI323850:0:Tyes1524328115231524152301
SMED366394:2:Tyes0------
SMED366394:3:Tyes---4544045
SMEL266834:1:Tyes0------
SMEL266834:2:Tyes---4645046
SMUT210007:0:Tyes01056-01-0
SONE211586:1:Tyes1193101020412039
SPEA398579:0:Tno1625361716241625162401
SPNE1313:0:Tyes0--012-
SPNE170187:0:Tyes0198-012-
SPNE171101:0:Tno0--012-
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