CANDIDATE ID: 107

CANDIDATE ID: 107

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9965052e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.7142857e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7304 (hyfG) (b2487)
   Products of gene:
     - MONOMER0-150 (hydrogenase 4, large subunit)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- G7303 (hyfF) (b2486)
   Products of gene:
     - MONOMER0-143 (hydrogenase 4, component F)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- G7301 (hyfD) (b2484)
   Products of gene:
     - MONOMER0-141 (hydrogenase 4, component D)
     - CPLX0-250 (hydrogenase 4)
       Reactions:
        2 H+ + 2 e-  ->  H2

- EG10479 (hycF) (b2720)
   Products of gene:
     - HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10478 (hycE) (b2721)
   Products of gene:
     - HYCELARGE-MONOMER (hydrogenase 3, large subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10477 (hycD) (b2722)
   Products of gene:
     - HYCD-MONOMER (hydrogenase 3, membrane subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)

- EG10476 (hycC) (b2723)
   Products of gene:
     - HYCC-MONOMER (hydrogenase 3, membrane subunit)
     - HYDROG3-CPLX (hydrogenase 3)
       Reactions:
        2 H+ + 2 e-  ->  H2
     - FHLMULTI-CPLX (formate hydrogenlyase complex)
       Reactions:
        formate + H+  ->  CO2 + H2
         In pathways
         ANARESP1-PWY (respiration (anaerobic))
         FERMENTATION-PWY (mixed acid fermentation)



Back to top



ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 141
Effective number of orgs (counting one per cluster within 468 clusters): 99

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XAUT78245 ncbi Xanthobacter autotrophicus Py26
WSUC273121 ncbi Wolinella succinogenes DSM 17407
UMET351160 ncbi uncultured methanogenic archaeon RC-I6
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB47
TPEN368408 ncbi Thermofilum pendens Hrk 57
TKOD69014 ncbi Thermococcus kodakarensis KOD17
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STRO369723 ncbi Salinispora tropica CNB-4406
STHE292459 ncbi Symbiobacterium thermophilum IAM 148636
SSP387093 ncbi Sulfurovum sp. NBC37-17
SSON300269 ncbi Shigella sonnei Ss0467
SPRO399741 ncbi Serratia proteamaculans 5687
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4197
SMAR399550 ncbi Staphylothermus marinus F16
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23387
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1977
SBOY300268 ncbi Shigella boydii Sb2277
SARE391037 ncbi Salinispora arenicola CNS-2056
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170296
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSP357808 ncbi Roseiflexus sp. RS-17
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111707
RPAL316058 ncbi Rhodopseudomonas palustris HaA27
RPAL316057 ncbi Rhodopseudomonas palustris BisB57
RPAL316056 ncbi Rhodopseudomonas palustris BisB187
RPAL316055 ncbi Rhodopseudomonas palustris BisA537
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38417
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H167
RCAS383372 ncbi Roseiflexus castenholzii DSM 139416
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PPUT76869 ncbi Pseudomonas putida GB-17
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PMEN399739 ncbi Pseudomonas mendocina ymp7
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13756
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PHOR70601 ncbi Pyrococcus horikoshii OT36
PFUR186497 ncbi Pyrococcus furiosus DSM 36386
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PENT384676 ncbi Pseudomonas entomophila L486
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
PABY272844 ncbi Pyrococcus abyssi GE57
NSP387092 ncbi Nitratiruptor sp. SB155-27
NSP35761 Nocardioides sp.7
NOCE323261 ncbi Nitrosococcus oceani ATCC 197077
NMUL323848 ncbi Nitrosospira multiformis ATCC 251967
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra7
MTUB336982 ncbi Mycobacterium tuberculosis F117
MTHE264732 ncbi Moorella thermoacetica ATCC 390737
MTBRV ncbi Mycobacterium tuberculosis H37Rv7
MTBCDC ncbi Mycobacterium tuberculosis CDC15517
MMAZ192952 ncbi Methanosarcina mazei Go17
MLAB410358 ncbi Methanocorpusculum labreanum Z6
MHUN323259 ncbi Methanospirillum hungatei JF-17
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK6
MCAP243233 ncbi Methylococcus capsulatus Bath7
MBUR259564 ncbi Methanococcoides burtonii DSM 62427
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P27
MBOV233413 ncbi Mycobacterium bovis AF2122/977
MBAR269797 ncbi Methanosarcina barkeri Fusaro6
MAVI243243 ncbi Mycobacterium avium 1047
MACE188937 ncbi Methanosarcina acetivorans C2A7
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
GURA351605 ncbi Geobacter uraniireducens Rf47
GSUL243231 ncbi Geobacter sulfurreducens PCA7
GMET269799 ncbi Geobacter metallireducens GS-157
FSP1855 Frankia sp. EAN1pec6
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354697
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough6
DSP255470 ncbi Dehalococcoides sp. CBDB17
DSP216389 ncbi Dehalococcoides sp. BAV17
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DHAF138119 ncbi Desulfitobacterium hafniense Y517
DETH243164 ncbi Dehalococcoides ethenogenes 1957
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE257
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF86
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29017
CFET360106 ncbi Campylobacter fetus fetus 82-406
CCUR360105 ncbi Campylobacter curvus 525.927
CCON360104 ncbi Campylobacter concisus 138267
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80527
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54826
BTHA271848 ncbi Burkholderia thailandensis E2646
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BFRA295405 ncbi Bacteroides fragilis YCH467
BFRA272559 ncbi Bacteroides fragilis NCTC 93437
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP17
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
AHYD196024 Aeromonas hydrophila dhakensis7
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232707
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C7
ACRY349163 ncbi Acidiphilium cryptum JF-57
ACEL351607 ncbi Acidothermus cellulolyticus 11B7
ACAU438753 ncbi Azorhizobium caulinodans ORS 5717


Names of the homologs of the genes in the group in each of these orgs
  G7304   G7303   G7301   EG10479   EG10478   EG10477   EG10476   
YPSE349747 YPSIP31758_1456YPSIP31758_1464YPSIP31758_1464YPSIP31758_1461YPSIP31758_1456YPSIP31758_1460YPSIP31758_1464
YPSE273123 YPTB2585YPTB2577YPTB2577YPTB2580YPTB2585YPTB2581YPTB2577
YPES386656 YPDSF_1963YPDSF_1955YPDSF_1955YPDSF_1958YPDSF_1963YPDSF_1959YPDSF_1955
YPES377628 YPN_2148YPN_2140YPN_2140YPN_2143YPN_2148YPN_2144YPN_2140
YPES360102 YPA_2045YPA_2037YPA_2037YPA_2040YPA_2045YPA_2041YPA_2037
YPES349746 YPANGOLA_A1814YPANGOLA_A1806YPANGOLA_A1806YPANGOLA_A1809YPANGOLA_A1814YPANGOLA_A1810YPANGOLA_A1806
YPES214092 YPO2553YPO2545YPO2545YPO2548YPO2553YPO2549YPO2545
YPES187410 Y1632Y1640Y1640Y1637Y1632Y1636Y1640
YENT393305 YE2804YE2803YE2801YE2805YE2804YE2800YE2799
XAUT78245 XAUT_0170XAUT_0169XAUT_4625XAUT_0170XAUT_0167XAUT_0166
WSUC273121 WS1838WS1839WS0485WS1837WS1838WS1841WS1842
UMET351160 RCIX2383RCIX2384RCIX2382RCIX2383RCIX2386RCIX2387
TTEN273068 TTE1700TTE1702TTE1701TTE1699TTE1700TTE1705TTE1706
TPEN368408 TPEN_0183TPEN_0185TPEN_0180TPEN_0182TPEN_0183TPEN_0187TPEN_0188
TKOD69014 TK2091TK1220TK2087TK2078TK2091TK2092TK2087
TCRU317025 TCR_0820TCR_0063TCR_0063TCR_0825TCR_0824TCR_0063
STYP99287 STM2849STM2318STM2848STM2849STM2850STM2851
STRO369723 STROP_4286STROP_4054STROP_0403STROP_4057STROP_4286STROP_4054
STHE292459 STH1655STH1655STH1594STH1589STH2773STH2769
SSP387093 SUN_0263SUN_0259SUN_0851SUN_2223SUN_0846SUN_0260SUN_0259
SSON300269 SSO_2868SSO_2567SSO_2565SSO_2867SSO_2868SSO_2869SSO_2870
SPRO399741 SPRO_2430SPRO_2432SPRO_3298SPRO_2429SPRO_2430SPRO_2431SPRO_2432
SMEL266834 SMA1529SMC03179SMC03179SMC01922SMA1529SMA1536
SMED366394 SMED_3620SMED_2806SMED_2806SMED_0898SMED_3620SMED_3614SMED_3625
SMAR399550 SMAR_1061SMAR_0645SMAR_1062SMAR_1061SMAR_1060SMAR_0028
SHIGELLA HYCEHYFFHYFDHYFHHYCEHYCDHYCC
SGLO343509 SG1599SG1591SG1594SG1599SG1595SG1591
SFLE373384 SFV_2782SFV_2531SFV_2529SFV_2783SFV_2782SFV_2781SFV_2780
SFLE198214 AAN44229.1AAN44031.1AAN44029.1AAN44034.1AAN44229.1AAN44230.1AAN44231.1
SERY405948 SACE_6899SACE_6891SACE_6891SACE_6894SACE_6899SACE_6895SACE_6542
SENT454169 SEHA_C3036SEHA_C2557SEHA_C3035SEHA_C3036SEHA_C3037SEHA_C3038
SENT321314 SCH_2782SCH_2318SCH_2781SCH_2782SCH_2783SCH_2784
SENT295319 SPA2707SPA0546SPA2706SPA2707SPA2708SPA2709
SENT220341 STY2971STY2548STY2970STY2971STY2972STY2973
SENT209261 T2751T0546T2750T2751T2752T2753
SDYS300267 SDY_2918SDY_2675SDY_2474SDY_2917SDY_2918SDY_2919SDY_2671
SBOY300268 SBO_2797SBO_2507SBO_2311SBO_2798SBO_2797SBO_2796SBO_2795
SARE391037 SARE_4460SARE_4452SARE_4452SARE_4455SARE_4721SARE_4452
RSPH349101 RSPH17029_1738RSPH17029_3449RSPH17029_1743RSPH17029_1738RSPH17029_1742RSPH17029_3449
RSPH272943 RSP_0102RSP_3715RSP_0107RSP_0102RSP_0106RSP_3715
RSP357808 ROSERS_3675ROSERS_2232ROSERS_2102ROSERS_2235ROSERS_3675ROSERS_2236ROSERS_2232
RRUB269796 RRU_A0316RRU_A0320RRU_A0314RRU_A0318RRU_A0316RRU_A0317RRU_A0315
RPAL316058 RPB_1264RPB_1263RPB_0148RPB_1354RPB_1264RPB_1261RPB_1260
RPAL316057 RPD_3851RPD_3852RPD_0676RPD_2877RPD_3851RPD_3854RPD_3855
RPAL316056 RPC_4570RPC_4571RPC_4573RPC_4569RPC_4570RPC_4574RPC_4575
RPAL316055 RPE_0956RPE_0955RPE_1720RPE_1717RPE_1712RPE_0953RPE_0952
RLEG216596 PRL110293PRL110294RL1372RL1709PRL110293PRL110296PRL110297
RFER338969 RFER_3288RFER_3289RFER_3090RFER_3288RFER_3291RFER_3292
REUT381666 H16_A2200H16_A2199H16_A1881H16_A1058H16_A2200H16_A2197H16_A2196
RCAS383372 RCAS_1321RCAS_1768RCAS_3387RCAS_1321RCAS_3388RCAS_3384
PSYR223283 PSPTO_3367PSPTO_3471PSPTO_3471PSPTO_3372PSPTO_3367PSPTO_3371
PSYR205918 PSYR_3199PSYR_3252PSYR_3252PSYR_3204PSYR_3199PSYR_3203
PPUT76869 PPUTGB1_3693PPUTGB1_1853PPUTGB1_1853PPUTGB1_3698PPUTGB1_3693PPUTGB1_3697PPUTGB1_1853
PPUT351746 PPUT_1744PPUT_3510PPUT_3510PPUT_1739PPUT_1744PPUT_1740
PPUT160488 PP_4121PP_2230PP_2230PP_4126PP_4121PP_4125
PMEN399739 PMEN_2414PMEN_1441PMEN_1433PMEN_2419PMEN_2414PMEN_2418PMEN_1441
PMAR167539 PRO_0197PRO_0172PRO_0172PRO_0183PRO_0197PRO_0184
PLUM243265 PLU3087PLU3078PLU3079PLU3082PLU3087PLU3083
PHOR70601 PH1437PH1452PH1440PH1437PH1439PH1431
PFUR186497 PF1434PF1430PF1436PF1434PF1435PF1430
PFLU220664 PFL_3899PFL_2611PFL_3904PFL_3899PFL_3903PFL_2611
PENT384676 PSEEN3486PSEEN3533PSEEN3533PSEEN3491PSEEN3486PSEEN3490
PARC259536 PSYC_0586PSYC_0594PSYC_0594PSYC_0591PSYC_0586PSYC_0590
PAER208964 PA2639PA1054PA2647PA2644PA2639PA2643PA1054
PAER208963 PA14_29990PA14_50730PA14_29880PA14_29920PA14_29990PA14_29930PA14_50730
PABY272844 PAB1394PAB1888PAB1391PAB1395PAB1394PAB1393PAB1392
NSP387092 NIS_0715NIS_0716NIS_0300NIS_0297NIS_0715NIS_0718NIS_0719
NSP35761 NOCA_4465NOCA_4466NOCA_0531NOCA_0528NOCA_4465NOCA_4468NOCA_4469
NOCE323261 NOC_1125NOC_1281NOC_0478NOC_1120NOC_1125NOC_1121NOC_2554
NMUL323848 NMUL_A1015NMUL_A1591NMUL_A1591NMUL_A1020NMUL_A1015NMUL_A1019NMUL_A1023
MTUB419947 MRA_0091MRA_0090MRA_3189MRA_3186MRA_0091MRA_0088MRA_0087
MTUB336982 TBFG_10088TBFG_10087TBFG_13177TBFG_13174TBFG_10088TBFG_10085TBFG_10084
MTHE264732 MOTH_2186MOTH_2188MOTH_2187MOTH_2185MOTH_2186MOTH_2190MOTH_2191
MTBRV RV0087RV0086RV3156RV3153RV0087RV0084RV0083
MTBCDC MT3236MT0093MT3244MT3241MT3236MT0091MT0090
MMAZ192952 MM2324MM1062MM2482MM2486MM1063MM1060MM1059
MLAB410358 MLAB_0959MLAB_0955MLAB_1619MLAB_0959MLAB_0960MLAB_0955
MHUN323259 MHUN_2590MHUN_1819MHUN_1741MHUN_1746MHUN_1745MHUN_1821MHUN_1822
MGIL350054 MFLV_4484MFLV_0164MFLV_4492MFLV_4489MFLV_4484MFLV_0164
MCAP243233 MCA_1138MCA_1139MCA_1349MCA_1352MCA_1138MCA_1141MCA_1142
MBUR259564 MBUR_1294MBUR_0135MBUR_1289MBUR_1292MBUR_1294MBUR_1293MBUR_0135
MBOV410289 BCG_0120BCG_0119BCG_3179BCG_3176BCG_0120BCG_0117BCG_0116
MBOV233413 MB0090MB0089MB3180MB3177MB0090MB0087MB0086
MBAR269797 MBAR_A0148MBAR_A3403MBAR_A3407MBAR_A0148MBAR_A0151MBAR_A3402
MAVI243243 MAV_5109MAV_5110MAV_4044MAV_4041MAV_5109MAV_5112MAV_5113
MACE188937 MA4372MA4371MA4572MA1500MA4372MA4369MA4368
KPNE272620 GKPORF_B2391GKPORF_B1972GKPORF_B2390GKPORF_B2391GKPORF_B2392GKPORF_B2393
GURA351605 GURA_0803GURA_0889GURA_0320GURA_0886GURA_0803GURA_0891GURA_4066
GSUL243231 GSU_3444GSU_0742GSU_2344GSU_0346GSU_3444GSU_0740GSU_0734
GMET269799 GMET_0153GMET_0372GMET_0168GMET_0369GMET_0153GMET_2600GMET_0375
FSP1855 FRANEAN1_6091FRANEAN1_6083FRANEAN1_6086FRANEAN1_6091FRANEAN1_6087FRANEAN1_5212
ESP42895 ENT638_3194ENT638_2822ENT638_3193ENT638_3194ENT638_3195ENT638_3196
EFER585054 EFER_0688EFER_0689EFER_0691EFER_0357EFER_0688EFER_0355EFER_0354
ECOO157 HYCEHYFFHYFDHYCFHYCEHYCDHYCC
ECOL83334 ECS3577ECS3348ECS3346ECS3576ECS3577ECS3578ECS3579
ECOL585397 ECED1_3172ECED1_2742ECED1_3171ECED1_3172ECED1_3173ECED1_3174
ECOL585057 ECIAI39_2909ECIAI39_2625ECIAI39_2623ECIAI39_2908ECIAI39_2909ECIAI39_2910ECIAI39_2911
ECOL585056 ECUMN_3043ECUMN_2799ECUMN_2797ECUMN_3042ECUMN_3043ECUMN_3044ECUMN_3045
ECOL585055 EC55989_2987EC55989_2771EC55989_2522EC55989_2986EC55989_2987EC55989_2988EC55989_2989
ECOL585035 ECS88_2986ECS88_2425ECS88_2985ECS88_2986ECS88_2987ECS88_2988
ECOL585034 ECIAI1_2815ECIAI1_2537ECIAI1_2535ECIAI1_2814ECIAI1_2815ECIAI1_2816ECIAI1_2817
ECOL481805 ECOLC_1189ECOLC_1190ECOLC_1192ECOLC_0992ECOLC_1189ECOLC_0990ECOLC_0989
ECOL469008 ECBD_1201ECBD_1202ECBD_1204ECBD_1005ECBD_1201ECBD_1003ECBD_1002
ECOL439855 ECSMS35_2846ECSMS35_2633ECSMS35_2631ECSMS35_2845ECSMS35_2846ECSMS35_2847ECSMS35_2848
ECOL413997 ECB_02571ECB_02378ECB_02376ECB_02570ECB_02571ECB_02572ECB_02573
ECOL409438 ECSE_2969ECSE_2771ECSE_2769ECSE_2968ECSE_2969ECSE_2970ECSE_2971
ECOL405955 APECO1_3804APECO1_4287APECO1_3805APECO1_3804APECO1_3803APECO1_3802
ECOL364106 UTI89_C3084UTI89_C2558UTI89_C3083UTI89_C3084UTI89_C3085UTI89_C3086
ECOL362663 ECP_2684ECP_2317ECP_2683ECP_2684ECP_2685ECP_2686
ECOL331111 ECE24377A_3009ECE24377A_2571ECE24377A_3008ECE24377A_3009ECE24377A_3010ECE24377A_3011
ECOL316407 ECK2716:JW2691:B2721ECK2482:JW2471:B2486ECK2480:JW2469:B2484ECK2715:JW2690:B2720ECK2716:JW2691:B2721ECK2717:JW2692:B2722ECK2718:JW2693:B2723
ECOL199310 C3281C2819C3280C3281C3282C3283
ECAR218491 ECA1241ECA1242ECA1244ECA1240ECA1241ECA1245ECA1246
DVUL882 DVU_0430DVU_2286DVU_2289DVU_2291DVU_2287DVU_2286
DSP255470 CBDBA1653CBDBA1655CBDBA883CBDBA880CBDBA850CBDBA1658CBDBA1659
DSP216389 DEHABAV1_1317DEHABAV1_1318DEHABAV1_0815DEHABAV1_0812DEHABAV1_0785DEHABAV1_1320DEHABAV1_1321
DPSY177439 DP1043DP1044DP1042DP1318DP1046DP1047
DHAF138119 DSY3115DSY3116DSY4176DSY2583DSY3115DSY3118DSY3119
DETH243164 DET_1571DET_1572DET_0931DET_0928DET_0867DET_1574DET_1575
CSAL290398 CSAL_3130CSAL_0903CSAL_3122CSAL_3125CSAL_3130CSAL_3126CSAL_0903
CPRO264201 PC0562PC0570PC0570PC0567PC0562PC0566PC0570
CKOR374847 KCR_0139KCR_0144KCR_0145KCR_0141KCR_0139KCR_0140
CHYD246194 CHY_1827CHY_1832CHY_1417CHY_1829CHY_1827CHY_1831CHY_1832
CFET360106 CFF8240_0127CFF8240_0128CFF8240_0126CFF8240_0127CFF8240_0131CFF8240_0132
CCUR360105 CCV52592_1635CCV52592_1038CCV52592_1518CCV52592_1636CCV52592_1635CCV52592_1790CCV52592_1791
CCON360104 CCC13826_0711CCC13826_1911CCC13826_1667CCC13826_0712CCC13826_0711CCC13826_1913CCC13826_1914
CBEI290402 CBEI_2993CBEI_2988CBEI_2988CBEI_2991CBEI_2993CBEI_2992CBEI_2988
BTHE226186 BT_4065BT_4060BT_4060BT_4063BT_4065BT_4064
BTHA271848 BTH_II1265BTH_II1264BTH_I1069BTH_II1265BTH_II1262BTH_II1261
BJAP224911 BLR6343BLR6342BLL4909BLR6343BLR6340BLR6339
BFRA295405 BF0867BF0862BF0862BF0865BF0867BF0866BF0862
BFRA272559 BF0790BF0785BF0785BF0788BF0790BF0789BF0785
ASP76114 EBA4187EBA4190EBA558EBA4187EBA4192EBA4193
ASP62977 ACIAD0733ACIAD0376ACIAD0376ACIAD0738ACIAD0733ACIAD0737ACIAD0741
ASAL382245 ASA_1812ASA_1814ASA_1726ASA_1811ASA_1812ASA_1813ASA_1814
AHYD196024 AHA_2502AHA_2500AHA_1772AHA_2503AHA_2502AHA_2501AHA_2500
AFER243159 AFE_0944AFE_0945AFE_0485AFE_0482AFE_0944AFE_0947AFE_0948
ADEH290397 ADEH_3659ADEH_3658ADEH_0413ADEH_3660ADEH_3659ADEH_3656ADEH_3655
ACRY349163 ACRY_1400ACRY_1399ACRY_0932ACRY_1113ACRY_1400ACRY_1397ACRY_1396
ACEL351607 ACEL_0270ACEL_0729ACEL_0278ACEL_0275ACEL_0270ACEL_0731ACEL_0726
ACAU438753 AZC_4356AZC_4357AZC_4360AZC_1676AZC_4356AZC_4359AZC_4360


Organism features enriched in list (features available for 136 out of the 141 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0000640892
Disease:Bubonic_plague 0.000147966
Disease:Dysentery 0.000147966
Disease:Gastroenteritis 0.0004355913
GC_Content_Range4:0-40 1.524e-199213
GC_Content_Range4:40-60 1.997e-982224
GC_Content_Range4:60-100 0.003985045145
GC_Content_Range7:0-30 0.0000331147
GC_Content_Range7:30-40 1.796e-138166
GC_Content_Range7:50-60 7.945e-847107
GC_Content_Range7:60-70 0.002511743134
Genome_Size_Range5:0-2 1.136e-714155
Genome_Size_Range5:2-4 3.799e-625197
Genome_Size_Range5:4-6 1.041e-1582184
Genome_Size_Range9:1-2 0.000042014128
Genome_Size_Range9:2-3 0.000069213120
Genome_Size_Range9:4-5 1.783e-74396
Genome_Size_Range9:5-6 1.150e-63988
Gram_Stain:Gram_Neg 0.000045297333
Gram_Stain:Gram_Pos 0.000036118150
Habitat:Multiple 0.001546155178
Motility:No 0.006236325151
Motility:Yes 0.000020383267
Optimal_temp.:25-30 0.00083781119
Oxygen_Req:Aerobic 0.001652230185
Oxygen_Req:Facultative 0.001304361201
Shape:Coccus 8.664e-6582
Shape:Rod 0.000103699347



Back to top



ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 180
Effective number of orgs (counting one per cluster within 468 clusters): 134

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M121
XFAS183190 ncbi Xylella fastidiosa Temecula11
XFAS160492 ncbi Xylella fastidiosa 9a5c1
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
VCHO345073 ncbi Vibrio cholerae O3951
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169611
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TTUR377629 ncbi Teredinibacter turnerae T79010
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TDEN243275 ncbi Treponema denticola ATCC 354050
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-30
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SMUT210007 ncbi Streptococcus mutans UA1590
SLOI323850 ncbi Shewanella loihica PV-40
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SGOR29390 Streptococcus gordonii Challis0
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
RSOL267608 ncbi Ralstonia solanacearum GMI10001
RALB246199 Ruminococcus albus 80
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP117 Pirellula sp.1
PPRO298386 ncbi Photobacterium profundum SS90
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PGIN242619 ncbi Porphyromonas gingivalis W830
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSP400668 ncbi Marinomonas sp. MWYL11
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MLEP272631 ncbi Mycobacterium leprae TN0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08031
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FMAG334413 ncbi Finegoldia magna ATCC 293280
EFAE226185 ncbi Enterococcus faecalis V5830
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE451
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEI306537 ncbi Corynebacterium jeikeium K4111
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CAULO ncbi Caulobacter crescentus CB151
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BSP376 Bradyrhizobium sp.1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG11
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  G7304   G7303   G7301   EG10479   EG10478   EG10477   EG10476   
ZMOB264203
XFAS405440 XFASM12_0276
XFAS183190 PD_0255
XFAS160492 XF0312
VVUL216895
VVUL196600
VPAR223926
VFIS312309
VCHO345073 VC0395_1123
VCHO VCA0155
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TTUR377629
TPSE340099 TETH39_0438
TPET390874
TPAL243276
TLET416591
TDEN243275
SWOL335541 SWOL_1700
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP94122
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579 SPEA_3284
SMUT210007
SLOI323850
SHAL458817 SHAL_3361
SGOR29390
SDEN318161
SDEG203122
SBAL402882
SBAL399599
SALA317655 SALA_1301
SAGA211110
SAGA208435
SAGA205921
SACI56780
RSOL267608 RSC2051
RALB246199
PTHE370438
PSP117 RB1431
PPRO298386
PPEN278197
PMUL272843
PGIN242619
PDIS435591
PATL342610
PAST100379
PAER178306
PACN267747
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NARO279238 SARO_2292
MSYN262723
MSUC221988
MSP400668 MMWYL1_3982
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MLEP272631
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LXYL281090
LSAK314315
LREU557436
LPNE400673 LPC_3068
LPNE297246 LPP2829
LPNE297245 LPL2698
LPNE272624 LPG2782
LPLA220668
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
HSOM228400
HSOM205914
HINF71421
HINF374930
HINF281310
HDUC233412
GOXY290633
GFOR411154 GFO_3553
FNUC190304
FMAG334413
EFAE226185
DOLE96561
DNOD246195
DDES207559
DARO159087 DARO_0957
CTRA471473
CTRA471472
CSUL444179
CSP78
CSP501479 CSE45_0209
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CNOV386415
CMUR243161
CMAQ397948 CMAQ_0428
CKLU431943
CJEI306537 JK1986
CGLU196627
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CCAV227941
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CAULO CC1939
CACE272562
CABO218497
BTUR314724
BSP376 BRADO4176
BLON206672
BHER314723
BGAR290434
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_4496
APLE434271
APLE416269
AORE350688
ANAE240017 ANA_1616
ALAI441768
AFUL224325
AAUR290340 AAUR_3679


Organism features enriched in list (features available for 166 out of the 180 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 4.422e-105292
Disease:Botulism 0.001791755
Disease:Legionnaire's_disease 0.006403744
Disease:Meningitis 0.002524867
Disease:Meningitis_and_septicemia 0.006403744
Disease:Pharyngitis 0.000038288
Disease:Pneumonia 0.0052100812
Disease:Wide_range_of_infections 7.817e-71111
Disease:bronchitis_and_pneumonitis 0.000038288
Disease:otitis_media 0.006403744
Disease:sinusitis 0.006403744
Endospores:No 0.002318974211
GC_Content_Range4:0-40 6.084e-991213
GC_Content_Range4:60-100 3.718e-1310145
GC_Content_Range7:0-30 2.180e-83147
GC_Content_Range7:30-40 0.003012360166
GC_Content_Range7:40-50 0.004892744117
GC_Content_Range7:50-60 0.007259021107
GC_Content_Range7:60-70 1.924e-1110134
Genome_Size_Range5:0-2 1.694e-667155
Genome_Size_Range5:2-4 0.003497369197
Genome_Size_Range5:4-6 9.859e-729184
Genome_Size_Range5:6-10 1.381e-6147
Genome_Size_Range9:0-1 5.549e-72027
Genome_Size_Range9:1-2 0.006033247128
Genome_Size_Range9:2-3 0.001493047120
Genome_Size_Range9:4-5 0.00070151596
Genome_Size_Range9:5-6 0.00147131488
Genome_Size_Range9:6-8 0.0000295138
Gram_Stain:Gram_Neg 0.002834181333
Gram_Stain:Gram_Pos 3.503e-767150
Habitat:Host-associated 7.363e-784206
Habitat:Specialized 0.0003587553
Habitat:Terrestrial 0.0018752231
Motility:No 0.002219756151
Motility:Yes 0.000037555267
Optimal_temp.:- 0.000064453257
Optimal_temp.:30-35 0.002524867
Optimal_temp.:35-37 0.0020824913
Optimal_temp.:37 1.005e-651106
Oxygen_Req:Aerobic 0.000013332185
Oxygen_Req:Anaerobic 0.009685838102
Oxygen_Req:Facultative 1.117e-682201
Pathogenic_in:Human 0.000095380213
Pathogenic_in:No 0.000329947226
Pathogenic_in:Swine 0.001791755
Salinity:Non-halophilic 2.856e-650106
Shape:Coccus 0.00009553882
Shape:Sphere 4.595e-61519
Temp._range:Mesophilic 0.0005393148473
Temp._range:Thermophilic 0.0092287435



Back to top



ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 34
Effective number of orgs (counting one per cluster within 468 clusters): 27

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TPEN368408 ncbi Thermofilum pendens Hrk 5 4.662e-63457
PABY272844 ncbi Pyrococcus abyssi GE5 0.00003344567
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 0.00003714637
TKOD69014 ncbi Thermococcus kodakarensis KOD1 0.00003944677
MHUN323259 ncbi Methanospirillum hungatei JF-1 0.00005154857
SMAR399550 ncbi Staphylothermus marinus F1 0.00010032736
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE25 0.00016665737
DETH243164 ncbi Dehalococcoides ethenogenes 195 0.00016865747
DSP216389 ncbi Dehalococcoides sp. BAV1 0.00019275857
DSP255470 ncbi Dehalococcoides sp. CBDB1 0.00020705917
MMAZ192952 ncbi Methanosarcina mazei Go1 0.00023036007
MACE188937 ncbi Methanosarcina acetivorans C2A 0.00041776537
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF8 0.00047633546
MLAB410358 ncbi Methanocorpusculum labreanum Z 0.00055353636
PHOR70601 ncbi Pyrococcus horikoshii OT3 0.00082413886
CCON360104 ncbi Campylobacter concisus 13826 0.00107517477
CCUR360105 ncbi Campylobacter curvus 525.92 0.00121377607
NSP387092 ncbi Nitratiruptor sp. SB155-2 0.00180248047
PFUR186497 ncbi Pyrococcus furiosus DSM 3638 0.00230384616
MTBCDC ncbi Mycobacterium tuberculosis CDC1551 0.00282258577
MTBRV ncbi Mycobacterium tuberculosis H37Rv 0.00303758667
MBOV233413 ncbi Mycobacterium bovis AF2122/97 0.00306228677
ACEL351607 ncbi Acidothermus cellulolyticus 11B 0.00311218697
MTUB336982 ncbi Mycobacterium tuberculosis F11 0.00313748707
SSP387093 ncbi Sulfurovum sp. NBC37-1 0.00313748707
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P2 0.00313748707
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra 0.00316288717
WSUC273121 ncbi Wolinella succinogenes DSM 1740 0.00321428737
MAVI243243 ncbi Mycobacterium avium 104 0.00540279407
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 0.00636705476
UMET351160 ncbi uncultured methanogenic archaeon RC-I 0.00771475656
BFRA295405 ncbi Bacteroides fragilis YCH46 0.00782959917
BFRA272559 ncbi Bacteroides fragilis NCTC 9343 0.00794119937
TVOL273116 ncbi Thermoplasma volcanium GSS1 0.00838333055


Names of the homologs of the genes in the group in each of these orgs
  G7304   G7303   G7301   EG10479   EG10478   EG10477   EG10476   
TPEN368408 TPEN_0183TPEN_0185TPEN_0180TPEN_0182TPEN_0183TPEN_0187TPEN_0188
PABY272844 PAB1394PAB1888PAB1391PAB1395PAB1394PAB1393PAB1392
MBUR259564 MBUR_1294MBUR_0135MBUR_1289MBUR_1292MBUR_1294MBUR_1293MBUR_0135
TKOD69014 TK2091TK1220TK2087TK2078TK2091TK2092TK2087
MHUN323259 MHUN_2590MHUN_1819MHUN_1741MHUN_1746MHUN_1745MHUN_1821MHUN_1822
SMAR399550 SMAR_1061SMAR_0645SMAR_1062SMAR_1061SMAR_1060SMAR_0028
CPRO264201 PC0562PC0570PC0570PC0567PC0562PC0566PC0570
DETH243164 DET_1571DET_1572DET_0931DET_0928DET_0867DET_1574DET_1575
DSP216389 DEHABAV1_1317DEHABAV1_1318DEHABAV1_0815DEHABAV1_0812DEHABAV1_0785DEHABAV1_1320DEHABAV1_1321
DSP255470 CBDBA1653CBDBA1655CBDBA883CBDBA880CBDBA850CBDBA1658CBDBA1659
MMAZ192952 MM2324MM1062MM2482MM2486MM1063MM1060MM1059
MACE188937 MA4372MA4371MA4572MA1500MA4372MA4369MA4368
CKOR374847 KCR_0139KCR_0144KCR_0145KCR_0141KCR_0139KCR_0140
MLAB410358 MLAB_0959MLAB_0955MLAB_1619MLAB_0959MLAB_0960MLAB_0955
PHOR70601 PH1437PH1452PH1440PH1437PH1439PH1431
CCON360104 CCC13826_0711CCC13826_1911CCC13826_1667CCC13826_0712CCC13826_0711CCC13826_1913CCC13826_1914
CCUR360105 CCV52592_1635CCV52592_1038CCV52592_1518CCV52592_1636CCV52592_1635CCV52592_1790CCV52592_1791
NSP387092 NIS_0715NIS_0716NIS_0300NIS_0297NIS_0715NIS_0718NIS_0719
PFUR186497 PF1434PF1430PF1436PF1434PF1435PF1430
MTBCDC MT3236MT0093MT3244MT3241MT3236MT0091MT0090
MTBRV RV0087RV0086RV3156RV3153RV0087RV0084RV0083
MBOV233413 MB0090MB0089MB3180MB3177MB0090MB0087MB0086
ACEL351607 ACEL_0270ACEL_0729ACEL_0278ACEL_0275ACEL_0270ACEL_0731ACEL_0726
MTUB336982 TBFG_10088TBFG_10087TBFG_13177TBFG_13174TBFG_10088TBFG_10085TBFG_10084
SSP387093 SUN_0263SUN_0259SUN_0851SUN_2223SUN_0846SUN_0260SUN_0259
MBOV410289 BCG_0120BCG_0119BCG_3179BCG_3176BCG_0120BCG_0117BCG_0116
MTUB419947 MRA_0091MRA_0090MRA_3189MRA_3186MRA_0091MRA_0088MRA_0087
WSUC273121 WS1838WS1839WS0485WS1837WS1838WS1841WS1842
MAVI243243 MAV_5109MAV_5110MAV_4044MAV_4041MAV_5109MAV_5112MAV_5113
PMAR167539 PRO_0197PRO_0172PRO_0172PRO_0183PRO_0197PRO_0184
UMET351160 RCIX2383RCIX2384RCIX2382RCIX2383RCIX2386RCIX2387
BFRA295405 BF0867BF0862BF0862BF0865BF0867BF0866BF0862
BFRA272559 BF0790BF0785BF0785BF0788BF0790BF0789BF0785
TVOL273116 TVN1455TVN1111TVN1113TVN1453TVN1106


Organism features enriched in list (features available for 34 out of the 34 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Severe_infection 0.003306822
Disease:Tuberculosis 0.000182133
Disease:and_abcesses 0.003306822
Disease:diarrhea 0.009373923
Endospores:No 0.000349022211
GC_Content_Range4:0-40 0.00824296213
GC_Content_Range4:40-60 0.006641820224
GC_Content_Range7:40-50 0.000042117117
Genome_Size_Range9:1-2 0.004943014128
Gram_Stain:Gram_Neg 0.00003608333
Habitat:Multiple 0.00619564178
Motility:No 0.003353016151
Oxygen_Req:Anaerobic 1.009e-618102
Oxygen_Req:Facultative 0.00006202201
Shape:Irregular_coccus 9.200e-7817
Shape:Rod 0.001987712347
Temp._range:Hyperthermophilic 0.0010833623
Temp._range:Mesophilic 0.009785622473



Back to top



ORGANISMS DEPLETED FOR GROUP:




Back to top



PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45390.4270



Back to top



PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7303   G7301   EG10479   EG10478   EG10477   EG10476   
G73040.9996120.9994370.999750.9999740.9998260.999548
G73030.9997470.9994920.9995840.9997150.999839
G73010.9995840.9995050.9993090.999665
EG104790.9997910.9998750.999317
EG104780.9998330.999532
EG104770.999726
EG10476



Back to top



PAIRWISE BLAST SCORES:

  G7304   G7303   G7301   EG10479   EG10478   EG10477   EG10476   
G73040.0f0---0--
G7303-0.0f0-----
G7301--0.0f0----
EG10479---0.0f0---
EG104780---0.0f0--
EG10477-----0.0f0-
EG10476-2.9e-13----0.0f0



Back to top



PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- HYDROG3-CPLX (hydrogenase 3) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.571, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9995 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
             0.9976 0.9930 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
   *in cand* 0.9997 0.9993 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
   *in cand* 0.9997 0.9993 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9997 0.9995 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)

- FERMENTATION-PWY (mixed acid fermentation) (degree of match pw to cand: 0.143, degree of match cand to pw: 0.571, average score: 0.597)
  Genes in pathway or complex:
             0.8916 0.7866 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.9369 0.9191 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.3394 0.2397 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.3445 0.2786 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.4437 0.2540 G6775 (adhP) ADHP-MONOMER (ethanol dehydrogenase)
             0.6121 0.4845 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4542 0.0920 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.4798 0.2365 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.7886 0.5960 G592 (ldhA) DLACTDEHYDROGNAD-MONOMER (D-lactate dehydrogenase)
             0.6503 0.5513 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.7567 0.4926 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.7963 0.5964 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.6865 0.2920 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.2181 0.1114 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
   *in cand* 0.9998 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9976 0.9930 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9995 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.1939 0.1017 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0948 0.0569 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.5679 0.3760 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.4909 0.2535 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
             0.7635 0.2772 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.3051 0.0593 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.6482 0.0780 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9997 0.9995 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)

- FHLMULTI-CPLX (formate hydrogenlyase complex) (degree of match pw to cand: 0.571, degree of match cand to pw: 0.571, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9976 0.9930 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9995 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9997 0.9995 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)

- ANARESP1-PWY (respiration (anaerobic)) (degree of match pw to cand: 0.148, degree of match cand to pw: 0.571, average score: 0.592)
  Genes in pathway or complex:
             0.4542 0.0920 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.4798 0.2365 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.4609 0.0786 EG10543 (lpd) E3-MONOMER (E3 monomer)
             0.1455 0.0515 EG10025 (aceF) ACEF-LIPOATE (AceF-lipoate)
             0.2683 0.1238 EG10024 (aceE) E1P-MONOMER (subunit of E1p component of pyruvate dehydrogenase complex)
             0.7635 0.2772 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.3051 0.0593 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.6482 0.0780 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.2181 0.1114 EG10756 (ppc) PEPCARBOX-MONOMER (Ppc)
             0.6865 0.2920 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.6503 0.5513 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.7567 0.4926 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.7963 0.5964 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.3394 0.2397 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.3445 0.2786 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.8914 0.7727 EG10258 (eno) ENOLASE-MONOMER (Eno)
   *in cand* 0.9998 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9993 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)
             0.9995 0.9987 EG10480 (hycG) HYCG-MONOMER (hydrogenase 3 and formate hydrogenlyase complex, HycG subunit)
             0.9976 0.9930 EG10475 (hycB) HYCBSMALL-MONOMER (hydrogenase 3, Fe-S subunit)
   *in cand* 0.9997 0.9995 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
                NIL    NIL EG10285 (fdhF) FORMATEDEHYDROGH-MONOMER (formate dehydrogenase H)
             0.1939 0.1017 EG10333 (frdD) FUM-MEMB2 (fumarate reductase membrane protein)
             0.0948 0.0569 EG10332 (frdC) FUM-MEMB1 (fumarate reductase membrane protein)
             0.5679 0.3760 EG10331 (frdB) FUM-FE-S (fumarate reductase iron-sulfur protein)
             0.4909 0.2535 EG10330 (frdA) FUM-FLAVO (fumarate reductase flavoprotein)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
   *in cand* 0.9997 0.9995 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)

- CPLX0-250 (hydrogenase 4) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.429, average score: 0.999)
  Genes in pathway or complex:
             0.9995 0.9990 G7305 (hyfH) MONOMER0-144 (hydrogenase 4, component H)
   *in cand* 0.9997 0.9995 G7303 (hyfF) MONOMER0-143 (hydrogenase 4, component F)
             0.9990 0.9977 G7302 (hyfE) MONOMER0-142 (hydrogenase 4, component E)
   *in cand* 0.9996 0.9993 G7301 (hyfD) MONOMER0-141 (hydrogenase 4, component D)
             0.9995 0.9986 G7300 (hyfC) MONOMER0-154 (hydrogenase 4, component C)
             0.9997 0.9993 EG11282 (hyfB) MONOMER0-153 (hydrogenase 4, component B)
             0.9978 0.9952 EG11150 (hyfA) MONOMER0-152 (hydrogenase 4, component A)
             0.9996 0.9989 G7306 (hyfI) MONOMER0-151 (hydrogenase 4, small subunit)
   *in cand* 0.9997 0.9994 G7304 (hyfG) MONOMER0-150 (hydrogenase 4, large subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10476 (hycC) HYCC-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9998 0.9993 EG10477 (hycD) HYCD-MONOMER (hydrogenase 3, membrane subunit)
   *in cand* 0.9997 0.9995 EG10478 (hycE) HYCELARGE-MONOMER (hydrogenase 3, large subunit)
   *in cand* 0.9997 0.9993 EG10479 (hycF) HYCF-MONOMER (formate hydrogenlyase complex iron-sulfur protein)



Back to top



GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7301 G7303 G7304 (centered at G7303)
EG10476 EG10477 EG10478 EG10479 (centered at EG10477)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7304   G7303   G7301   EG10479   EG10478   EG10477   EG10476   
275/623290/623318/623333/623281/623299/623262/623
AAEO224324:0:Tyes058--052-
AAUR290340:2:Tyes--0----
AAVE397945:0:Tyes--19881-0-
ABAC204669:0:Tyes224-022-3
ABAU360910:0:Tyes-0946---946
ABOR393595:0:Tyes-00---0
ABUT367737:0:Tyes9-039--
ACAU438753:0:Tyes2714271527180271427172718
ACEL351607:0:Tyes0458850460455
ACRY349163:8:Tyes4644630176464461460
ADEH290397:0:Tyes3282328103283328232793278
AEHR187272:0:Tyes--127--0130
AFER243159:0:Tyes45145230451454455
AHYD196024:0:Tyes7097070710709708707
AMAR234826:0:Tyes---47-0-
AMAR329726:9:Tyes--0321195310
AMET293826:0:Tyes-2----0
ANAE240017:0:Tyes---0---
APER272557:0:Tyes1---10-
APHA212042:0:Tyes6500-716650630-
ASAL382245:5:Tyes8688085868788
ASP1667:2:Tyes--0----
ASP232721:2:Tyes-414551-0-
ASP62928:0:Tyes08-----
ASP62977:0:Tyes32700332327331335
ASP76114:2:Tyes211621170-211621192120
AVAR240292:3:Tyes1455-09701455--
BABO262698:0:Tno-00----
BABO262698:1:Tno---1-0-
BAMB339670:3:Tno-0-3-4-
BAMB398577:3:Tno-0-3-4-
BAMY326423:0:Tyes-00---0
BANT260799:0:Tno-003--0
BANT261594:2:Tno-003--0
BANT568206:2:Tyes-003--0
BANT592021:2:Tno-003--0
BAPH198804:0:Tyes0--504-
BAPH372461:0:Tyes0--50--
BBAC264462:0:Tyes0736736-0--
BBAC360095:0:Tyes-7130710-709-
BBRO257310:0:Tyes-7960--800-
BCAN483179:0:Tno-00----
BCAN483179:1:Tno---1-0-
BCEN331271:2:Tno-0-3-4-
BCEN331272:3:Tyes-0-3-4-
BCER226900:1:Tyes-003--0
BCER288681:0:Tno-003--0
BCER315749:1:Tyes-0035-0
BCER405917:1:Tyes5003--0
BCER572264:1:Tno-003--0
BCIC186490:0:Tyes8-0384-
BCLA66692:0:Tyes-8770---877
BFRA272559:1:Tyes5003540
BFRA295405:0:Tno5003540
BHAL272558:0:Tyes-00---0
BHEN283166:0:Tyes-06843-4-
BJAP224911:0:Fyes14481447-0144814451444
BLIC279010:0:Tyes-00----
BMAL243160:1:Tno80-3-4-
BMAL320388:1:Tno08---4-
BMAL320389:1:Tyes08---4-
BMEL224914:0:Tno-00----
BMEL224914:1:Tno---0-1-
BMEL359391:0:Tno-00----
BMEL359391:1:Tno---1-0-
BOVI236:0:Tyes-00----
BOVI236:1:Tyes---0---
BPAR257311:0:Tno-2830--287-
BPER257313:0:Tyes-4759--0-
BPET94624:0:Tyes-38880---
BPSE272560:0:Tyes01--034
BPSE320372:0:Tno01--034
BPSE320373:0:Tno01--034
BPUM315750:0:Tyes-00---0
BQUI283165:0:Tyes-46581-0-
BSP107806:2:Tyes0--504-
BSP36773:2:Tyes-0-3-4-
BSP376:0:Tyes---0---
BSUB:0:Tyes-00---0
BSUI204722:0:Tyes-00----
BSUI204722:1:Tyes---1-0-
BSUI470137:0:Tno-00---0
BSUI470137:1:Tno---1-0-
BTHA271848:0:Tno43--410
BTHA271848:1:Tno---0---
BTHE226186:0:Tyes500354-
BTHU281309:1:Tno-003--0
BTHU412694:1:Tno-00---0
BTRI382640:1:Tyes-010413-4-
BVIE269482:7:Tyes-0-3-4-
BWEI315730:4:Tyes-003-40
BXEN266265:0:Tyes-0---2-
BXEN266265:1:Tyes4---4-0
CAULO:0:Tyes--0----
CBEI290402:0:Tyes5003540
CBLO203907:0:Tyes5--051-
CBLO291272:0:Tno5--051-
CBUR227377:1:Tyes-147147--0144
CBUR360115:1:Tno-159159--0156
CBUR434922:2:Tno-00--1443
CCHL340177:0:Tyes055-01-
CCON360104:2:Tyes6261063625958
CCUR360105:0:Tyes1841830185184181180
CDES477974:0:Tyes31066--301063
CFET360106:0:Tyes12-0156
CHOM360107:1:Tyes0-850--
CHUT269798:0:Tyes-003--0
CHYD246194:0:Tyes3984030400398402403
CJAP155077:0:Tyes-00---0
CJEI306537:0:Tyes------0
CJEJ192222:0:Tyes8-038--
CJEJ195099:0:Tno8-0384-
CJEJ354242:2:Tyes8-038--
CJEJ360109:0:Tyes8-038--
CJEJ407148:0:Tno8-038--
CKOR374847:0:Tyes056201-
CMAQ397948:0:Tyes----0--
CMET456442:0:Tyes01--034
CMIC31964:2:Tyes--0---0
CMIC443906:2:Tyes--0---2
CPEL335992:0:Tyes---1-04
CPHY357809:0:Tyes3--430-
CPRO264201:0:Fyes0885048
CPSY167879:0:Tyes-00---0
CRUT413404:0:Tyes-4-1-0-
CSAL290398:0:Tyes2261022532256226122570
CSP501479:8:Fyes--0----
CTEP194439:0:Tyes055-01-
CTET212717:0:Tyes-11---0
CVES412965:0:Tyes---1-0-
CVIO243365:0:Tyes-4---0-
DARO159087:0:Tyes---0---
DETH243164:0:Tyes67467563600677678
DGEO319795:1:Tyes0-8504-
DHAF138119:0:Tyes53653716010536539540
DPSY177439:2:Tyes12-029145
DRAD243230:3:Tyes612-0606612607-
DRED349161:0:Tyes5-0354-
DSHI398580:3:Tyes--0----
DSHI398580:5:Tyes-0-597--0
DSP216389:0:Tyes54955031280552553
DSP255470:0:Tno69970031280702703
DVUL882:1:Tyes01844-1847184918451844
ECAN269484:0:Tyes3130-245-310-
ECAR218491:0:Tyes1240156
ECHA205920:0:Tyes-0-492---
ECOL199310:0:Tno455-0454455456457
ECOL316407:0:Tno22920228229230231
ECOL331111:6:Tno414-0413414415416
ECOL362663:0:Tno375-0374375376377
ECOL364106:1:Tno523-0522523524525
ECOL405955:2:Tyes497-0496497498499
ECOL409438:6:Tyes20920208209210211
ECOL413997:0:Tno20320202203204205
ECOL439855:4:Tno20320202203204205
ECOL469008:0:Tno208209211320810
ECOL481805:0:Tno208209211320810
ECOL585034:0:Tno27520274275276277
ECOL585035:0:Tno549-0548549550551
ECOL585055:0:Tno4662440465466467468
ECOL585056:2:Tno25120250251252253
ECOL585057:0:Tno29320292293294295
ECOL585397:0:Tno433-0432433434435
ECOL83334:0:Tno24220241242243244
ECOLI:0:Tno320238239240241
ECOO157:0:Tno24520244245246247
EFER585054:1:Tyes333334336333310
ELIT314225:0:Tyes13-03---
ERUM254945:0:Tyes-0399276---
ERUM302409:0:Tno-0393276---
ESP42895:1:Tyes384-0383384385386
FALN326424:0:Tyes0-850--
FJOH376686:0:Tyes800-8--
FNOD381764:0:Tyes-----01
FPHI484022:1:Tyes---1-0-
FRANT:0:Tno---1-0-
FSP106370:0:Tyes0-850--
FSP1855:0:Tyes876-8688718768720
FSUC59374:0:Tyes-219219-0223218
FTUL351581:0:Tno---0-1-
FTUL393011:0:Tno---0-1-
FTUL393115:0:Tyes---1-0-
FTUL401614:0:Tyes---0-1-
FTUL418136:0:Tno---1-0-
FTUL458234:0:Tno---0-1-
GBET391165:0:Tyes1092--0-1-
GFOR411154:0:Tyes--0----
GKAU235909:1:Tyes--036--
GMET269799:1:Tyes02151521202453218
GSUL243231:0:Tyes3082393198803082391385
GTHE420246:1:Tyes-0395398400-0
GURA351605:0:Tyes47856205594785643721
GVIO251221:0:Tyes2178240704382178--
HACI382638:1:Tyes8-0384-
HARS204773:0:Tyes-01127----
HAUR316274:2:Tyes0--15833369--
HBUT415426:0:Tyes05-20--
HCHE349521:0:Tyes-00---0
HHAL349124:0:Tyes-00--40
HHEP235279:0:Tyes8-0384-
HMAR272569:8:Tyes5121855-0512--
HMOD498761:0:Tyes055-01-
HMUK485914:1:Tyes0-269617380-2697
HNEP81032:0:Tyes-0-1000---
HPY:0:Tno0-85-4-
HPYL357544:1:Tyes0-85-4-
HPYL85963:0:Tno0-8504-
HSAL478009:4:Tyes66--6866-0
HSP64091:2:Tno63--6563-0
HWAL362976:1:Tyes06-20-41
IHOS453591:0:Tyes0--6130--
ILOI283942:0:Tyes-00---0
JSP290400:1:Tyes-925452-02542
JSP375286:0:Tyes-00----
KPNE272620:2:Tyes402-0401402403404
KRAD266940:2:Fyes--0---0
LBIF355278:2:Tyes0-620130--
LBIF456481:2:Tno0-620850--
LBOR355276:1:Tyes--0334--0
LBOR355277:1:Tno--3300--330
LCHO395495:0:Tyes08-50--
LINN272626:1:Tno-00---0
LINT189518:1:Tyes--7300736733730
LINT267671:1:Tno--25610255525582561
LMON169963:0:Tno-00---0
LMON265669:0:Tyes-00---0
LPNE272624:0:Tno-----0-
LPNE297245:1:Fno-----0-
LPNE297246:1:Fyes-----0-
LPNE400673:0:Tno-----0-
LSPH444177:1:Tyes-00----
LWEL386043:0:Tyes-00---0
MABS561007:1:Tyes1510-1518-151015140
MACE188937:0:Tyes2798279729950279827952794
MAEO419665:0:Tyes0625--64627628
MAER449447:0:Tyes2015-024392015--
MAQU351348:2:Tyes-06---0
MAVI243243:0:Tyes1056105730105610591060
MBAR269797:1:Tyes0-31913195033190
MBOV233413:0:Tno4331273124410
MBOV410289:0:Tno4330833080410
MBUR259564:0:Tyes1076010721074107610750
MCAP243233:0:Tyes01201204034
MEXT419610:0:Tyes-424442440-707-
MFLA265072:0:Tyes147300---0
MGIL350054:3:Tyes43430435143484343-0
MHUN323259:0:Tyes840760547879
MJAN243232:2:Tyes527--0527-817
MKAN190192:0:Tyes0---05-
MLAB410358:0:Tyes40-656450
MLOT266835:2:Tyes-0-3-4-
MMAG342108:0:Tyes01--034
MMAR267377:0:Tyes0---313308-
MMAR368407:0:Tyes1--014-
MMAR394221:0:Tyes-0-472---
MMAR402880:1:Tyes316---05-
MMAR426368:0:Tyes0---310305-
MMAR444158:0:Tyes313---05-
MMAZ192952:0:Tyes1293314531457410
MPET420662:1:Tyes-3-0---
MSED399549:0:Tyes464--4664640-
MSME246196:0:Tyes1207-119912021207-0
MSP164756:1:Tno11-0611--
MSP164757:0:Tno11-0611-0
MSP189918:2:Tyes11-0611--
MSP266779:3:Tyes-1700167-166-
MSP400668:0:Tyes-0-----
MSP409:2:Tyes---1-0-
MSTA339860:0:Tyes0---0--
MTBCDC:0:Tno3297333053302329710
MTBRV:0:Tno4331053102410
MTHE187420:0:Tyes0---0--
MTHE264732:0:Tyes1320156
MTHE349307:0:Tyes06-20--
MTUB336982:0:Tno4330753072410
MTUB419947:0:Tyes4332053202410
MVAN350058:0:Tyes1128-112011231128-0
MXAN246197:0:Tyes--0---0
NARO279238:0:Tyes---0---
NEUR228410:0:Tyes-00----
NEUT335283:2:Tyes-0760----
NFAR247156:2:Tyes7-0-7-2661
NHAM323097:2:Tyes-001162--0
NMUL323848:3:Tyes05745745048
NOCE323261:1:Tyes63679306316366322041
NPHA348780:2:Tyes7370-739737--
NSEN222891:0:Tyes493--7374930-
NSP103690:6:Tyes3159-376403159--
NSP35761:1:Tyes3936393730393639393940
NSP387092:0:Tyes43343430433436437
NWIN323098:0:Tyes-7827820---
OANT439375:4:Tyes-00----
OANT439375:5:Tyes---0-1-
OCAR504832:0:Tyes-00732--0
OIHE221109:0:Tyes-00---0
OTSU357244:0:Fyes0--287-286-
PABY272844:0:Tyes7610764760761762763
PAER208963:0:Tyes8167503841675
PAER208964:0:Tno1594016021599159415980
PARC259536:0:Tyes088504-
PARS340102:0:Tyes0---03-
PCAR338963:0:Tyes0-8504-
PCRY335284:1:Tyes0-8504-
PENT384676:0:Tyes04040504-
PFLU205922:0:Tyes0-8504-
PFLU216595:1:Tyes0-8504-
PFLU220664:0:Tyes1281-01286128112850
PFUR186497:0:Tyes40-6450
PHAL326442:1:Tyes-00---0
PHOR70601:0:Tyes621-9680
PING357804:0:Tyes-0----0
PINT246198:0:Tyes1---10-
PISL384616:0:Tyes0---0--
PLUM243265:0:Fyes901495-
PLUT319225:0:Tyes055-01-
PMAR146891:0:Tyes---0131-
PMAR167539:0:Tyes2500112512-
PMAR167540:0:Tyes-0-1023--
PMAR167542:0:Tyes-0-1125--
PMAR167546:0:Tyes13--0131-
PMAR167555:0:Tyes15--015--
PMAR59920:0:Tno14--014--
PMAR74546:0:Tyes-0-102311-
PMAR74547:0:Tyes41-0104111-
PMAR93060:0:Tyes13--0131-
PMEN399739:0:Tyes99680100199610008
PMOB403833:0:Tyes-----01
PNAP365044:8:Tyes-089----
PPUT160488:0:Tno187700188218771881-
PPUT351746:0:Tyes517581758051-
PPUT76869:0:Tno1846001851184618500
PRUM264731:0:Tyes1---10-
PSP117:0:Tyes-0-----
PSP296591:2:Tyes43--410
PSP312153:0:Tyes-0-3---
PSP56811:2:Tyes8-0384-
PSTU379731:0:Tyes-00---0
PSYR205918:0:Tyes05555504-
PSYR223283:2:Tyes0103103504-
PTOR263820:0:Tyes--107-5870208
RAKA293614:0:Fyes---0-2-
RBEL336407:0:Tyes298--12980-
RBEL391896:0:Fno0--3080309-
RCAN293613:0:Fyes0--2670269-
RCAS383372:0:Tyes0-4482046020472043
RCON272944:0:Tno0--771-772-
RDEN375451:4:Tyes-260-0--260
RETL347834:5:Tyes2105--02105-2100
REUT264198:3:Tyes-37040--704
REUT381666:2:Tyes109810977830109810951094
RFEL315456:2:Tyes0--7150716-
RFER338969:1:Tyes198199-0198201202
RLEG216596:4:Tyes01--034
RLEG216596:6:Tyes--0340---
RMAS416276:1:Tyes0----534-
RMET266264:1:Tyes01--034
RPAL258594:0:Tyes1484-0147914841480-
RPAL316055:0:Tyes4376175875310
RPAL316056:0:Tyes1240156
RPAL316057:0:Tyes3204320502218320432073208
RPAL316058:0:Tyes1131113001221113111281127
RPOM246200:1:Tyes-1241240---
RPRO272947:0:Tyes0--4300431-
RRIC392021:0:Fno0--728-729-
RRIC452659:0:Tyes0--746-747-
RRUB269796:1:Tyes2604231
RSAL288705:0:Tyes--0---2
RSOL267608:1:Tyes-0-----
RSP101510:3:Fyes3737-374537423737-0
RSP357808:0:Tyes156412901321564133129
RSPH272943:3:Tyes--0---0
RSPH272943:4:Tyes0--504-
RSPH349101:1:Tno--0---0
RSPH349101:2:Tno0--504-
RSPH349102:4:Tyes--0---0
RSPH349102:5:Tyes0--50--
RTYP257363:0:Tno0--4370438-
RXYL266117:0:Tyes4-0-430
SACI330779:0:Tyes2--02--
SALA317655:1:Tyes---0---
SARE391037:0:Tyes8003251-0
SAUR158878:1:Tno-00---0
SAUR158879:1:Tno-00---0
SAUR196620:0:Tno-00---0
SAUR273036:0:Tno-00---0
SAUR282458:0:Tno-00---0
SAUR282459:0:Tno-00---0
SAUR359786:1:Tno-00---0
SAUR359787:1:Tno-00---0
SAUR367830:3:Tno-00---0
SAUR418127:0:Tyes-00---0
SAUR426430:0:Tno-00---0
SAUR93061:0:Fno-00---0
SAUR93062:1:Tno-00---0
SAVE227882:1:Fyes0-173170165209-
SBOY300268:1:Tyes4601860461460459458
SCO:2:Fyes0-1199119611911228-
SDYS300267:1:Tyes4121860411412413183
SELO269084:0:Tyes--195802188--
SENT209261:0:Tno2092-02091209220932094
SENT220341:0:Tno401-0400401402403
SENT295319:0:Tno2074-02073207420752076
SENT321314:2:Tno476-0475476477478
SENT454169:2:Tno455-0454455456457
SEPI176279:1:Tyes-00---0
SEPI176280:0:Tno-00---0
SERY405948:0:Tyes3583503503533583540
SFLE198214:0:Tyes212205212213214
SFLE373384:0:Tno24120242241240239
SFUM335543:0:Tyes1722-1717017221721-
SGLO343509:3:Tyes8-03840
SHAE279808:0:Tyes-00---0
SHAL458817:0:Tyes-0-----
SHIGELLA:0:Tno225203225226227
SLAC55218:1:Fyes-001110---
SMAR399550:0:Tyes1048619-1049104810470
SMED366394:2:Tyes6---6011
SMED366394:3:Tyes-188318830---
SMEL266834:0:Tyes0---0-5
SMEL266834:2:Tyes-166516650---
SONE211586:1:Tyes8-0384-
SPEA398579:0:Tno-0-----
SPRO399741:1:Tyes138760123
SRUB309807:1:Tyes--11750-2239930
SSAP342451:2:Tyes-2750---0
SSED425104:0:Tyes-2356----0
SSOL273057:0:Tyes0653-20655-
SSON300269:1:Tyes28920288289290291
SSP1131:0:Tyes21--0211-
SSP1148:0:Tyes---158001581-
SSP292414:2:Tyes-8018010---
SSP321327:0:Tyes-1568156803--
SSP321332:0:Tyes--0740743-183
SSP387093:0:Tyes40596197059110
SSP644076:5:Fyes---0---
SSP644076:7:Fyes-00----
SSP64471:0:Tyes---6506746510
SSP84588:0:Tyes---0261-
STHE292459:0:Tyes-66665012211217
STOK273063:0:Tyes0--20--
STRO369723:0:Tyes38723639036423872-3639
STYP99287:1:Tyes528-0527528529530
SWOL335541:0:Tyes---0---
TACI273075:0:Tyes--04650
TCRU317025:0:Tyes77200777-7760
TDEN292415:0:Tyes-00--6670
TDEN326298:0:Tyes9-039--
TELO197221:0:Tyes-535316260-
TERY203124:0:Tyes3942--1038394210390
TFUS269800:0:Tyes8-038--
TKOD69014:0:Tyes8970893884897898893
TMAR243274:0:Tyes-----10
TPEN368408:1:Tyes3502378
TPSE340099:0:Tyes-0-----
TROS309801:0:Tyes--0----
TROS309801:1:Tyes309--0309-313
TSP1755:0:Tyes-0----1
TSP28240:0:Tyes-----01
TTEN273068:0:Tyes1320156
TTHE262724:1:Tyes8-0384-
TTHE300852:2:Tyes0-8504-
TVOL273116:0:Tyes-361-573590
UMET351160:0:Tyes43-5410
VCHO:1:Fyes------0
VCHO345073:0:Tno------0
VEIS391735:1:Tyes-010933-41093
WPIP80849:0:Tyes2830-1120283--
WPIP955:0:Tyes0495-3760--
WSUC273121:0:Tyes1226122701225122612291230
XAUT78245:1:Tyes43-4478410
XAXO190486:0:Tyes-00--22350
XCAM190485:0:Tyes-00--20750
XCAM314565:0:Tno-00--11250
XCAM316273:0:Tno-12061206--01206
XCAM487884:0:Tno-00--11620
XFAS160492:2:Tno-----0-
XFAS183190:1:Tyes-----0-
XFAS405440:0:Tno-----0-
XORY291331:0:Tno-843843--0843
XORY342109:0:Tyes-785785--0785
XORY360094:0:Tno-00--53810
YENT393305:1:Tyes5426510
YPES187410:5:Tno0885048
YPES214092:3:Tno8003840
YPES349746:2:Tno8003840
YPES360102:3:Tyes8003840
YPES377628:2:Tno8003840
YPES386656:2:Tno8003840
YPSE273123:2:Tno8003840
YPSE349747:2:Tno0774037



Back to top