CANDIDATE ID: 111

CANDIDATE ID: 111

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9973795e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11231 (rpmI) (b1717)
   Products of gene:
     - EG11231-MONOMER (50S ribosomal subunit protein L35)
     - CPLX0-3962 (50S ribosomal subunit)
     - CPLX0-3964 (ribosome)

- EG11001 (thrS) (b1719)
   Products of gene:
     - THRS-MONOMER (threonyl-tRNA synthetase)
     - THRS-CPLX (threonyl-tRNA synthetase)
       Reactions:
        tRNAthr + L-threonine + ATP  ->  L-threonyl-tRNAthr + diphosphate + AMP
         In pathways
         TRNA-CHARGING-PWY (tRNA charging pathway)

- EG10881 (rplT) (b1716)
   Products of gene:
     - EG10881-MONOMER (50S ribosomal subunit protein L20)
     - CPLX0-3962 (50S ribosomal subunit)
     - CPLX0-3964 (ribosome)

- EG10710 (pheT) (b1713)
   Products of gene:
     - PHET-MONOMER (phenylalanyl-tRNA synthetase β-chain)
     - PHES-CPLX (phenylalanyl-tRNA synthetase)
       Reactions:
        tRNAphe + L-phenylalanine + ATP  ->  L-phenylalanyl-tRNAphe + diphosphate + AMP
         In pathways
         TRNA-CHARGING-PWY (tRNA charging pathway)

- EG10709 (pheS) (b1714)
   Products of gene:
     - PHES-MONOMER (phenylalanyl-tRNA synthetase α-chain)
     - PHES-CPLX (phenylalanyl-tRNA synthetase)
       Reactions:
        tRNAphe + L-phenylalanine + ATP  ->  L-phenylalanyl-tRNAphe + diphosphate + AMP
         In pathways
         TRNA-CHARGING-PWY (tRNA charging pathway)

- EG10506 (infC) (b1718)
   Products of gene:
     - EG10506-MONOMER (protein chain initiation factor IF-3)

- EG10440 (ihfA) (b1712)
   Products of gene:
     - PD00347 (integration host factor (IHF), α subunit)
     - PC00027 (IHF transcriptional dual regulator)
       Regulatees:
        TU00392 (csgDEFG)
        TU0-13666 (glmY)
        TU0-1198 (uspB)
        TU00431 (uspA)
        TU00410 (fimB)
        TU00114 (atoDAEB)
        TU0-6401 (folA)
        TU0-8761 (dcuD)
        TU00284 (hipBA)
        TU0-1122 (dmsABC)
        TU0-1681 (sodB)
        TU0-2042 (gcd)
        TU0-2041 (hpt)
        TU00326 (pspABCDE)
        TU0-2742 (hemF)
        TU0-2741 (amiA-hemF)
        TU0-2621 (sufABCDSE)
        TU0-3341 (ygjG)
        TU0-3901 (sra)
        TU0-3723 (acs-yjcHG)
        TU0-3721 (acs-yjcHG)
        TU0-4441 (norVW)
        TU0-5001 (ibpB)
        TU0-5163 (ulaG)
        TU0-5162 (ulaABCDEF)
        TU0-5741 (pspG)
        TU00369 (ubiCA)
        TU0-1962 (glcDEFGBA)
        TU861 (yeiL)
        TU0-6629 (ssuEADCB)
        TU00199 (nrfABCDEFG)
        TU0-14693 (pstSCA)
        TU0-14692 (pstS)
        TU00202 (pstSCAB-phoU)
        TU00110 (carAB)
        TU00106 (gltA)
        TU00103 (sucABCD)
        TU0-4201 (hemA-prfA-prmC)
        TU00078 (cysJIH)
        TU00158 (ndh)
        TU0-8344 (hypABCDE-fhlA)
        TU00154 (hypABCDE)
        TU00153 (hycABCDEFGHI)
        TU00176 (dps)
        TU00172 (glnHPQ)
        TU00125 (tdcABCDEFG)
        TU00247 (caiTABCDE)
        TU00310 (nuoABCEFGHIJKLMN)
        TU00403 (ecpD-htrE)
        TU00263 (ecpD-htrE)
        TU00262 (dppABCDF)
        TU00136 (flhDC)
        TU00064 (sodA)
        TU00093 (mtr)
        TU00088 (tyrP)
        TU0-1981 (osmY)
        TU00235 (adiA)
        TU00477 (ompC)
        TU00404 (ecpD-htrE)
        TU00398 (osmE)
        TU00182 (gltBDF)
        TU0-2644 (micF)
        TU00377 (focA-pflB)
        TU221 (rpoH)
        TU61 (rtcBA)
        TU182 (fimAICDFGH)
        TU161 (ompR-envZ)
        TU4 (paaZ)
        TU5 (paaABCDEFGHIJK)
        TU356 (nmpC)
        TU368 (yiaJ)
        TU524 (ilvLXG_1G_2MEDA)
        TU525 (ilvLXG_1G_2MEDA)
        TU592 (yiaKLMNO-lyx-sgbHUE)
        TU00175 (ihfB)
        TU00174 (ihfA)
        TU00001 (aceBAK)
        TU00216 (glpTQ)
        TU00021 (dusB-fis)
        TU00050 (ompF)
        TU00049 (ompC)
        TU00046 (nirBDC-cysG)
        TU00045 (narK)
        TU00044 (narGHJI)
        TU0-14287 (yjbEFGH)
        TU0-14111 (yjbE)



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 261
Effective number of orgs (counting one per cluster within 468 clusters): 169

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A7
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110187
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103317
XFAS405440 ncbi Xylella fastidiosa M127
XFAS183190 ncbi Xylella fastidiosa Temecula17
XFAS160492 ncbi Xylella fastidiosa 9a5c7
XCAM487884 Xanthomonas campestris pv. paulliniae7
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-107
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80047
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339137
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3067
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB46
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
STHE292459 ncbi Symbiobacterium thermophilum IAM 148636
SSP94122 ncbi Shewanella sp. ANA-37
SSON300269 ncbi Shigella sonnei Ss0467
SSED425104 ncbi Shewanella sediminis HAW-EB37
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153056
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-17
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-47
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14356
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122286
SEPI176279 ncbi Staphylococcus epidermidis RP62A6
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SDYS300267 ncbi Shigella dysenteriae Sd1977
SDEN318161 ncbi Shewanella denitrificans OS2177
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2277
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
SAUR93062 ncbi Staphylococcus aureus aureus COL6
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83256
SAUR426430 ncbi Staphylococcus aureus aureus Newman6
SAUR418127 ncbi Staphylococcus aureus aureus Mu36
SAUR367830 Staphylococcus aureus aureus USA3006
SAUR359787 ncbi Staphylococcus aureus aureus JH16
SAUR359786 ncbi Staphylococcus aureus aureus JH96
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4766
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2526
SAUR273036 ncbi Staphylococcus aureus RF1226
SAUR196620 ncbi Staphylococcus aureus aureus MW26
SAUR158879 ncbi Staphylococcus aureus aureus N3156
SAUR158878 ncbi Staphylococcus aureus aureus Mu506
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PING357804 ncbi Psychromonas ingrahamii 377
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c7
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NOCE323261 ncbi Nitrosococcus oceani ATCC 197077
NMEN374833 ncbi Neisseria meningitidis 0534427
NMEN272831 ncbi Neisseria meningitidis FAM187
NMEN122587 ncbi Neisseria meningitidis Z24917
NMEN122586 ncbi Neisseria meningitidis MC587
NHAM323097 ncbi Nitrobacter hamburgensis X146
NGON242231 ncbi Neisseria gonorrhoeae FA 10907
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E7
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL17
MSP266779 ncbi Chelativorans sp. BNC16
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAR394221 ncbi Maricaulis maris MCS106
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MFLA265072 ncbi Methylobacillus flagellatus KT7
MEXT419610 ncbi Methylobacterium extorquens PA16
MCAP243233 ncbi Methylococcus capsulatus Bath7
MAQU351348 ncbi Marinobacter aquaeolei VT86
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53346
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LMON265669 ncbi Listeria monocytogenes 4b F23656
LMON169963 ncbi Listeria monocytogenes EGD-e6
LINN272626 ncbi Listeria innocua Clip112626
LCHO395495 ncbi Leptothrix cholodnii SP-66
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
JSP375286 ncbi Janthinobacterium sp. Marseille6
ILOI283942 ncbi Idiomarina loihiensis L2TR7
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HNEP81032 Hyphomonas neptunium6
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HINF71421 ncbi Haemophilus influenzae Rd KW207
HINF374930 ncbi Haemophilus influenzae PittEE7
HINF281310 ncbi Haemophilus influenzae 86-028NP7
HHAL349124 ncbi Halorhodospira halophila SL16
HDUC233412 ncbi Haemophilus ducreyi 35000HP7
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GOXY290633 ncbi Gluconobacter oxydans 621H6
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
GBET391165 ncbi Granulibacter bethesdensis CGDNIH16
ESP42895 Enterobacter sp.7
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G206
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA7
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)7
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29017
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C7
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto6
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6576
CBOT498213 ncbi Clostridium botulinum B1 str. Okra6
CBOT441772 ncbi Clostridium botulinum F str. Langeland6
CBOT441771 ncbi Clostridium botulinum A str. Hall6
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193976
CBOT36826 Clostridium botulinum A6
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN6
CBLO203907 ncbi Candidatus Blochmannia floridanus6
CACE272562 ncbi Clostridium acetobutylicum ATCC 8246
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHA271848 ncbi Burkholderia thailandensis E2647
BSUB ncbi Bacillus subtilis subtilis 1686
BSP36773 Burkholderia sp.7
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)7
BPSE320373 ncbi Burkholderia pseudomallei 6687
BPSE320372 ncbi Burkholderia pseudomallei 1710b7
BPSE272560 ncbi Burkholderia pseudomallei K962437
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BMAL320389 ncbi Burkholderia mallei NCTC 102477
BMAL320388 ncbi Burkholderia mallei SAVP17
BMAL243160 ncbi Burkholderia mallei ATCC 233447
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K166
BCIC186490 Candidatus Baumannia cicadellinicola6
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BBRO257310 ncbi Bordetella bronchiseptica RB506
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)6
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)6
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS427
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AHYD196024 Aeromonas hydrophila dhakensis7
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ACRY349163 ncbi Acidiphilium cryptum JF-56
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  EG11231   EG11001   EG10881   EG10710   EG10709   EG10506   EG10440   
YPSE349747 YPSIP31758_1714YPSIP31758_1712YPSIP31758_1715YPSIP31758_1717YPSIP31758_1716YPSIP31758_1713YPSIP31758_1718
YPSE273123 YPTB2340YPTB2342YPTB2339YPTB2336YPTB2337YPTB2341YPTB2335
YPES386656 YPDSF_0719YPDSF_0717YPDSF_0720YPDSF_0722YPDSF_0721YPDSF_0718YPDSF_0723
YPES377628 YPN_1886YPN_1888YPN_1885YPN_1882YPN_1883YPN_1887YPN_1881
YPES360102 YPA_1776YPA_1778YPA_1775YPA_1772YPA_1773YPA_1777YPA_1771
YPES349746 YPANGOLA_A2623YPANGOLA_A2625YPANGOLA_A2622YPANGOLA_A2620YPANGOLA_A2621YPANGOLA_A2624YPANGOLA_A2619
YPES214092 YPO2431YPO2433YPO2430YPO2428YPO2429YPO2432YPO2427
YPES187410 Y1903Y1905Y1909Y1908Y1904Y1910
YENT393305 YE1914YE1912YE1915YE1917YE1916YE1913YE1918
XORY360094 XOOORF_3487XOOORF_3489XOOORF_3486XOOORF_3484XOOORF_3485XOOORF_3488XOOORF_3483
XORY342109 XOO3025XOO3027XOO3024XOO3022XOO3023XOO3026XOO3021
XORY291331 XOO3185XOO3187XOO3184XOO3182XOO3183XOO3186XOO3181
XFAS405440 XFASM12_2097XFASM12_2099XFASM12_2096XFASM12_2094XFASM12_2095XFASM12_2098XFASM12_2093
XFAS183190 PD_1914PD_1916PD_1913PD_1911PD_1912PD_1915PD_1910
XFAS160492 XF0739XF0736XF0740XF0742XF0741XF0737XF0743
XCAM487884 XCC-B100_1706XCC-B100_1704XCC-B100_1707XCC-B100_1709XCC-B100_1708XCC-B100_1705XCC-B100_1710
XCAM316273 XCAORF_2775XCAORF_2777XCAORF_2774XCAORF_2772XCAORF_2773XCAORF_2776XCAORF_2771
XCAM314565 XC_1652XC_1650XC_1653XC_1655XC_1654XC_1651XC_1656
XCAM190485 XCC2461XCC2463XCC2460XCC2458XCC2459XCC2462XCC2457
XAXO190486 XAC2592XAC2594XAC2591XAC2589XAC2590XAC2593XAC2588
VVUL216895 VV1_2397VV1_2400VV1_2371VV1_2370VV1_2398VV1_2375
VVUL196600 VV1945VV1942VV1970VV1971VV1944VV1966
VPAR223926 VP1281VP1280VP1282VP1291VP1290VP1294
VFIS312309 VF1214VF1218VF1236VF1235VF1216VF1237
VEIS391735 VEIS_3089VEIS_3092VEIS_3094VEIS_3093VEIS_3090VEIS_3095
VCHO345073 VC0395_0940VC0395_0942VC0395_0939VC0395_A0844VC0395_A0843VC0395_0941VC0395_A0846
VCHO VCA0289VCA0287VCA0290VC1220VC1219VC1222
TTUR377629 TERTU_1452TERTU_1458TERTU_1460TERTU_1459TERTU_1453TERTU_1461
TTEN273068 TTE1713TTE1691TTE1688TTE1689TTE1693TTE2453
TDEN292415 TBD_1007TBD_1010TBD_1012TBD_1011TBD_1008TBD_1013
TCRU317025 TCR_1665TCR_1667TCR_1664TCR_1662TCR_1663TCR_1661
STYP99287 STM1335STM1333STM1336STM1338STM1337STM1334STM1339
STHE292459 STH2558STH1093STH1106STH1105STH1091STH3230
SSP94122 SHEWANA3_2045SHEWANA3_2043SHEWANA3_2046SHEWANA3_1864SHEWANA3_1863SHEWANA3_2044SHEWANA3_1865
SSON300269 SSO_1441SSO_1439SSO_1442SSO_1445SSO_1444SSO_1440SSO_1446
SSED425104 SSED_2122SSED_2120SSED_2123SSED_2597SSED_2598SSED_2121SSED_2596
SSAP342451 SSP1082SSP1086SSP1656SSP1657SSP1084SSP1273
SPRO399741 SPRO_2146SPRO_2144SPRO_2147SPRO_2149SPRO_2148SPRO_2145SPRO_2150
SPEA398579 SPEA_2261SPEA_2263SPEA_2260SPEA_2469SPEA_2470SPEA_2262SPEA_2468
SONE211586 SO_2301SO_2299SO_2302SO_2086SO_2085SO_2300SO_2087
SMEL266834 SMC01010SMC00364SMC00366SMC00365SMC00362SMC01786
SMED366394 SMED_1054SMED_3485SMED_3487SMED_3486SMED_3483SMED_0830
SLOI323850 SHEW_2030SHEW_2032SHEW_2029SHEW_2215SHEW_2216SHEW_2031SHEW_2214
SHIGELLA RPMITHRSRPLTPHETPHESINFCHIMA
SHAL458817 SHAL_2022SHAL_2020SHAL_2023SHAL_1813SHAL_1812SHAL_2021SHAL_1814
SHAE279808 SH1242SH1247SH1822SH1823SH1245SH1438
SGLO343509 SG1420SG1419SG1421SG1423SG1422SG1424
SFLE373384 SFV_1506SFV_1504SFV_1507SFV_1510SFV_1509SFV_1505SFV_1511
SFLE198214 AAN43104.1AAN43102.1AAN43105.1AAN43108.1AAN43107.1AAN43103.1AAN43109.1
SEPI176280 SE_1357SE_1353SE_0832SE_0831SE_1355SE_1160
SEPI176279 SERP1246SERP1242SERP0722SERP0721SERP1244SERP1041
SENT454169 SEHA_C1463SEHA_C1461SEHA_C1464SEHA_C1466SEHA_C1465SEHA_C1462SEHA_C1467
SENT321314 SCH_1354SCH_1352SCH_1355SCH_1357SCH_1356SCH_1353SCH_1358
SENT295319 SPA1508SPA1511SPA1507SPA1505SPA1506SPA1510SPA1504
SENT220341 STY1776STY1778STY1775STY1772STY1773STY1777STY1771
SENT209261 T1215T1213T1216T1219T1218T1214T1220
SDYS300267 SDY_1812SDY_1814SDY_1811SDY_1808SDY_1809SDY_1813SDY_1807
SDEN318161 SDEN_1707SDEN_1705SDEN_1708SDEN_1603SDEN_1602SDEN_1706SDEN_1604
SDEG203122 SDE_1577SDE_1580SDE_1582SDE_1581SDE_1578SDE_1583
SBOY300268 SBO_1377SBO_1375SBO_1378SBO_1380SBO_1379SBO_1376SBO_1381
SBAL402882 SHEW185_2220SHEW185_2222SHEW185_2219SHEW185_1901SHEW185_1900SHEW185_2221SHEW185_1902
SBAL399599 SBAL195_2328SBAL195_2330SBAL195_2327SBAL195_1908SBAL195_1907SBAL195_2329SBAL195_1909
SAUR93062 SACOL1729SACOL1725SACOL1149SACOL1148SACOL1727SACOL1513
SAUR93061 SAOUHSC_01788SAOUHSC_01784SAOUHSC_01093SAOUHSC_01092SAOUHSC_01786SAOUHSC_01490
SAUR426430 NWMN_1576NWMN_1572NWMN_1050NWMN_1049NWMN_1574NWMN_1382
SAUR418127 SAHV_1669SAHV_1665SAHV_1130SAHV_1129SAHV_1667SAHV_1461
SAUR367830 SAUSA300_1629SAUSA300_1625SAUSA300_1038SAUSA300_1037SAUSA300_1627SAUSA300_1362
SAUR359787 SAURJH1_1774SAURJH1_1770SAURJH1_1220SAURJH1_1219SAURJH1_1772SAURJH1_1560
SAUR359786 SAURJH9_1740SAURJH9_1736SAURJH9_1198SAURJH9_1197SAURJH9_1738SAURJH9_1530
SAUR282459 SAS1611SAS1607SAS1073SAS1072SAS1609SAS1414
SAUR282458 SAR1762SAR1758SAR1112SAR1111SAR1760SAR1482
SAUR273036 SAB1542CSAB1538CSAB1003SAB1002SAB1540CSAB1335C
SAUR196620 MW1626MW1622MW1022MW1021MW1624MW1362
SAUR158879 SA1506SA1502SA0986SA0985SA1504SA1305
SAUR158878 SAV1683SAV1678SAV1139SAV1138SAV1680SAV1473
RSOL267608 RSC1577RSC1580RSC1582RSC1581RSC1578RSC1583
RPAL316058 RPB_2168RPB_0044RPB_0047RPB_0045RPB_0065RPB_2651
RPAL316057 RPD_3261RPD_0165RPD_0162RPD_0164RPD_0168RPD_2687
RPAL316056 RPC_3121RPC_0448RPC_0444RPC_0447RPC_0341RPC_2677
RPAL316055 RPE_2337RPE_0497RPE_0493RPE_0496RPE_0500RPE_2827
RPAL258594 RPA3406RPA0038RPA0035RPA0037RPA0040RPA2742
RMET266264 RMET_1160RMET_1163RMET_1165RMET_1164RMET_1161RMET_1166
RLEG216596 RL2528RL0268RL0270RL0269RL0266RL1640
RFER338969 RFER_1336RFER_1339RFER_1341RFER_1340RFER_1337RFER_1342
REUT381666 H16_A1339H16_A1342H16_A1344H16_A1343H16_A1340H16_A1345
REUT264198 REUT_A1277REUT_A1275REUT_A1278REUT_A1280REUT_A1279REUT_A1281
PTHE370438 PTH_1956PTH_1953PTH_1949PTH_1950PTH_1955PTH_0121
PSYR223283 PSPTO_2378PSPTO_2381PSPTO_2383PSPTO_2382PSPTO_2379PSPTO_2384
PSYR205918 PSYR_2162PSYR_2165PSYR_2167PSYR_2166PSYR_2163PSYR_2168
PSTU379731 PST_2369PST_2366PST_2364PST_2365PST_2368PST_2363
PSP56811 PSYCPRWF_2136PSYCPRWF_2317PSYCPRWF_2315PSYCPRWF_2316PSYCPRWF_2137PSYCPRWF_2314
PSP312153 PNUC_0831PNUC_0829PNUC_0832PNUC_0834PNUC_0830PNUC_0835
PSP296591 BPRO_2102BPRO_2105BPRO_2107BPRO_2106BPRO_2103BPRO_2108
PPUT76869 PPUTGB1_3481PPUTGB1_3478PPUTGB1_3476PPUTGB1_3477PPUTGB1_3480PPUTGB1_3475
PPUT351746 PPUT_3225PPUT_3222PPUT_3220PPUT_3221PPUT_3224PPUT_3219
PPUT160488 PP_2465PP_2468PP_2470PP_2469PP_2466PP_2471
PPRO298386 PBPRA2161PBPRA2157PBPRA2155PBPRA2156PBPRA2158PBPRA2154
PNAP365044 PNAP_2854PNAP_2851PNAP_2849PNAP_2850PNAP_2853PNAP_2848
PMUL272843 PM0603PM0593PM0604PM0629PM0631PM0602PM0628
PMEN399739 PMEN_1976PMEN_1979PMEN_1981PMEN_1980PMEN_1977PMEN_1982
PLUM243265 PLU2667PLU2669PLU2666PLU2664PLU2665PLU2668PLU2663
PING357804 PING_2217PING_2219PING_2216PING_1404PING_1403PING_2218PING_1405
PHAL326442 PSHAA1398PSHAA1396PSHAA1399PSHAA1903PSHAA1904PSHAA1397PSHAA1902
PFLU220664 PFL_6184PFL_2114PFL_2116PFL_2115PFL_2112PFL_2117
PFLU216595 PFLU4148PFLU4145PFLU4143PFLU4144PFLU4147PFLU4142
PFLU205922 PFL_1931PFL_1934PFL_1936PFL_1935PFL_1932PFL_1937
PENT384676 PSEEN1963PSEEN1966PSEEN1968PSEEN1967PSEEN1964PSEEN1969
PCRY335284 PCRYO_2417PCRYO_2300PCRYO_2298PCRYO_2299PCRYO_2418PCRYO_2297
PCAR338963 PCAR_1418PCAR_1421PCAR_1423PCAR_1422PCAR_1419PCAR_1424
PATL342610 PATL_2497PATL_2499PATL_2496PATL_2494PATL_2495PATL_2498PATL_2493
PARC259536 PSYC_2098PSYC_1997PSYC_1995PSYC_1996PSYC_2099PSYC_1994
PAER208964 PA2744PA2741PA2739PA2740PA2743PA2738
PAER208963 PA14_28650PA14_28680PA14_28710PA14_28690PA14_28660PA14_28720
OIHE221109 OB2154OB2150OB2130OB2131OB2152OB1792
NWIN323098 NWI_2035NWI_0067NWI_0065NWI_0066NWI_0069NWI_1408
NOCE323261 NOC_1142NOC_1140NOC_1143NOC_1145NOC_1144NOC_1141NOC_1146
NMEN374833 NMCC_0682NMCC_0680NMCC_0683NMCC_0687NMCC_0684NMCC_0681NMCC_0688
NMEN272831 NMC0674NMC0672NMC0675NMC0681NMC0676NMC0673NMC0682
NMEN122587 NMA0931NMA0929NMA0932NMA0937NMA0933NMA0930NMA0938
NMEN122586 NMB_0722NMB_0720NMB_0723NMB_0728NMB_0724NMB_0721NMB_0729
NHAM323097 NHAM_1669NHAM_0075NHAM_0073NHAM_0074NHAM_0077NHAM_1587
NGON242231 NGO0297NGO0295NGO0298NGO0304NGO0299NGO0296NGO0305
NEUT335283 NEUT_2329NEUT_2331NEUT_2328NEUT_2326NEUT_2327NEUT_2330NEUT_2325
NEUR228410 NE0958NE0955NE0953NE0954NE0957NE0952
MTHE264732 MOTH_1759MOTH_1756MOTH_1750MOTH_1751MOTH_1758MOTH_0085
MSUC221988 MS1055MS1053MS1056MS1090MS1091MS1054MS1089
MSP409 M446_6323M446_5320M446_5318M446_5319M446_4232M446_6231
MSP400668 MMWYL1_2595MMWYL1_2597MMWYL1_2594MMWYL1_2592MMWYL1_2593MMWYL1_2596MMWYL1_2591
MSP266779 MESO_1007MESO_0674MESO_0677MESO_0676MESO_0671MESO_1147
MPET420662 MPE_A1886MPE_A1888MPE_A1885MPE_A1883MPE_A1887MPE_A1882
MMAR394221 MMAR10_2393MMAR10_0129MMAR10_0132MMAR10_0130MMAR10_0123MMAR10_1522
MLOT266835 MLL0914MLL5057MLL5053MLL5055MLL5061MLR8425
MFLA265072 MFLA_2001MFLA_2003MFLA_2000MFLA_1998MFLA_1999MFLA_2002MFLA_1997
MEXT419610 MEXT_2321MEXT_1628MEXT_1630MEXT_1629MEXT_1624MEXT_2055
MCAP243233 MCA_0695MCA_0693MCA_0696MCA_0698MCA_0697MCA_0694MCA_0699
MAQU351348 MAQU_2061MAQU_2058MAQU_2056MAQU_2057MAQU_2060MAQU_2055
LWEL386043 LWE1572LWE1804LWE1177LWE1176LWE1806LWE1960
LSPH444177 BSPH_4102BSPH_4099BSPH_4072BSPH_4073BSPH_4101BSPH_1929
LPNE400673 LPC_0420LPC_0423LPC_0425LPC_0424LPC_0421LPC_0426
LPNE297246 LPP2770LPP2767LPP2765LPP2766LPP2769LPP2764
LPNE297245 LPL2643LPL2640LPL2638LPL2639LPL2642LPL2637
LPNE272624 LPG2714LPG2712LPG2710LPG2711LPG2713LPG2709
LMON265669 LMOF2365_1580LMOF2365_1808LMOF2365_1231LMOF2365_1230LMOF2365_1810LMOF2365_1963
LMON169963 LMO1559LMO1783LMO1222LMO1221LMO1785LMO1934
LINN272626 LIN1594LIN1895LIN1185LIN1184LIN1897LIN2048
LCHO395495 LCHO_1747LCHO_1745LCHO_1748LCHO_1750LCHO_1746LCHO_1751
KPNE272620 GKPORF_B1306GKPORF_B1308GKPORF_B1305GKPORF_B1303GKPORF_B1304GKPORF_B1307GKPORF_B1302
JSP375286 MMA_1487MMA_1490MMA_1492MMA_1491MMA_1488MMA_1493
ILOI283942 IL1397IL1399IL1396IL1394IL1395IL1398IL1393
HSOM228400 HSM_1355HSM_1319HSM_1354HSM_1336HSM_1334HSM_1356HSM_1337
HSOM205914 HS_0876HS_0844HS_0875HS_0861HS_0859HS_0877HS_0862
HNEP81032 HNE_3196HNE_0431HNE_0435HNE_0433HNE_0428HNE_1163
HMOD498761 HM1_1780HM1_1791HM1_1798HM1_1797HM1_1789HM1_0716
HINF71421 HI_1319HI_1367HI_1320HI_1312HI_1311HI_1318HI_1313
HINF374930 CGSHIEE_05015CGSHIEE_04375CGSHIEE_05010CGSHIEE_05115CGSHIEE_05120CGSHIEE_05020CGSHIEE_05110
HINF281310 NTHI1642NTHI1797NTHI1643NTHI1625NTHI1624NTHI1641NTHI1626
HHAL349124 HHAL_0427HHAL_0430HHAL_0432HHAL_0431HHAL_0428HHAL_0433
HDUC233412 HD_1800HD_1803HD_1799HD_1483HD_1484HD_1802HD_1482
HCHE349521 HCH_04580HCH_04576HCH_04574HCH_04575HCH_04579HCH_04573
HARS204773 HEAR1801HEAR1798HEAR1796HEAR1797HEAR1800HEAR1795
GSUL243231 GSU_1515GSU_1518GSU_1520GSU_1519GSU_1516GSU_1521
GOXY290633 GOX0823GOX0263GOX0261GOX0262GOX0824GOX0114
GMET269799 GMET_1411GMET_1414GMET_1416GMET_1415GMET_1412GMET_1417
GKAU235909 GK2719GK2716GK2706GK2707GK2718GK2215
GBET391165 GBCGDNIH1_1614GBCGDNIH1_1504GBCGDNIH1_1506GBCGDNIH1_1505GBCGDNIH1_1613GBCGDNIH1_1015
ESP42895 ENT638_1726ENT638_1724ENT638_1727ENT638_1729ENT638_1728ENT638_1725ENT638_1730
EFER585054 EFER_1349EFER_1347EFER_1350EFER_1352EFER_1351EFER_1353
ECOO157 RPMITHRSRPLTPHETPHESINFCHIMA
ECOL83334 ECS2424ECS2426ECS2423ECS2420ECS2421ECS2425ECS2419
ECOL585397 ECED1_1918ECED1_1920ECED1_1917ECED1_1915ECED1_1916ECED1_1914
ECOL585057 ECIAI39_1337ECIAI39_1335ECIAI39_1338ECIAI39_1340ECIAI39_1339ECIAI39_1341
ECOL585056 ECUMN_2007ECUMN_2009ECUMN_2006ECUMN_2004ECUMN_2005ECUMN_2003
ECOL585055 EC55989_1884EC55989_1886EC55989_1883EC55989_1881EC55989_1882EC55989_1880
ECOL585035 ECS88_1767ECS88_1769ECS88_1766ECS88_1764ECS88_1765ECS88_1763
ECOL585034 ECIAI1_1772ECIAI1_1775ECIAI1_1771ECIAI1_1769ECIAI1_1770ECIAI1_1768
ECOL481805 ECOLC_1915ECOLC_1913ECOLC_1916ECOLC_1918ECOLC_1917ECOLC_1914ECOLC_1919
ECOL469008 ECBD_1928ECBD_1926ECBD_1929ECBD_1932ECBD_1931ECBD_1927ECBD_1933
ECOL439855 ECSMS35_1474ECSMS35_1472ECSMS35_1475ECSMS35_1477ECSMS35_1476ECSMS35_1473ECSMS35_1478
ECOL413997 ECB_01686ECB_01688ECB_01685ECB_01682ECB_01683ECB_01687ECB_01681
ECOL409438 ECSE_1885ECSE_1887ECSE_1884ECSE_1882ECSE_1883ECSE_1886ECSE_1881
ECOL364106 UTI89_C1910UTI89_C1912UTI89_C1909UTI89_C1906UTI89_C1907UTI89_C1911UTI89_C1905
ECOL362663 ECP_1664ECP_1666ECP_1663ECP_1661ECP_1662ECP_1665ECP_1660
ECOL331111 ECE24377A_1937ECE24377A_1935ECE24377A_1932ECE24377A_1933ECE24377A_1936ECE24377A_1931
ECOL316407 ECK1715:JW1707:B1717ECK1717:JW1709:B1719ECK1714:JW1706:B1716ECK1711:JW1703:B1713ECK1712:JW5277:B1714ECK1716:JW5829:B1718ECK1710:JW1702:B1712
ECAR218491 ECA2420ECA2422ECA2419ECA2417ECA2418ECA2421ECA2416
DNOD246195 DNO_0527DNO_0524DNO_1056DNO_1055DNO_0526DNO_1057
DHAF138119 DSY0240DSY0269DSY0272DSY0271DSY0267DSY0193
DDES207559 DDE_2637DDE_2639DDE_2634DDE_2635DDE_2638DDE_2058
DARO159087 DARO_2675DARO_2677DARO_2674DARO_2672DARO_2676DARO_2671
CVIO243365 CV_1348CV_1351CV_1353CV_1352CV_1349CV_1354
CVES412965 COSY_0593COSY_0595COSY_0592COSY_0590COSY_0591COSY_0594COSY_0589
CSAL290398 CSAL_1799CSAL_1802CSAL_1804CSAL_1803CSAL_1800CSAL_1805
CRUT413404 RMAG_0646RMAG_0648RMAG_0645RMAG_0642RMAG_0643RMAG_0647RMAG_0641
CPSY167879 CPS_2909CPS_2906CPS_2995CPS_2996CPS_2908CPS_2994
CJAP155077 CJA_2530CJA_2527CJA_2525CJA_2526CJA_2529CJA_2524
CHYD246194 CHY_1577CHY_1579CHY_1576CHY_1570CHY_1571CHY_1578CHY_0205
CDES477974 DAUD_1382DAUD_1384DAUD_1381DAUD_1377DAUD_1378DAUD_1383DAUD_0075
CBUR434922 COXBU7E912_1415COXBU7E912_1412COXBU7E912_1410COXBU7E912_1411COXBU7E912_1414COXBU7E912_1409
CBUR360115 COXBURSA331_A1478COXBURSA331_A1475COXBURSA331_A1473COXBURSA331_A1474COXBURSA331_A1477COXBURSA331_A1472
CBUR227377 CBU_1326CBU_1323CBU_1321CBU_1322CBU_1325CBU_1320
CBOT536232 CLM_3546CLM_3542CLM_3537CLM_3538CLM_3544CLM_4026
CBOT515621 CLJ_B3405CLJ_B3401CLJ_B3396CLJ_B3397CLJ_B3403CLJ_B3864
CBOT498213 CLD_1403CLD_1406CLD_1411CLD_1410CLD_1404CLD_0949
CBOT441772 CLI_3196CLI_3193CLI_3188CLI_3189CLI_3195CLI_3754
CBOT441771 CLC_3041CLC_3038CLC_3033CLC_3034CLC_3040CLC_3512
CBOT441770 CLB_3168CLB_3165CLB_3160CLB_3161CLB_3167CLB_3615
CBOT36826 CBO3138CBO3135CBO3130CBO3131CBO3137CBO3534
CBLO291272 BPEN_364BPEN_362BPEN_365BPEN_367BPEN_366BPEN_363
CBLO203907 BFL353BFL351BFL354BFL356BFL355BFL352
CACE272562 CAC2362CAC2359CAC2356CAC2357CAC2361CAC3211
BWEI315730 BCERKBAB4_4407BCERKBAB4_4404BCERKBAB4_4391BCERKBAB4_4392BCERKBAB4_4406BCERKBAB4_1434
BVIE269482 BCEP1808_1441BCEP1808_1439BCEP1808_1442BCEP1808_1444BCEP1808_1443BCEP1808_1440BCEP1808_1445
BTHU412694 BALH_4160BALH_4157BALH_4141BALH_4142BALH_4159BALH_1364
BTHU281309 BT9727_4307BT9727_4304BT9727_4293BT9727_4294BT9727_4306BT9727_1392
BTHA271848 BTH_I2593BTH_I2595BTH_I2592BTH_I2590BTH_I2591BTH_I2594BTH_I2589
BSUB BSU37560BSU28850BSU28630BSU28640BSU28870BSU22790
BSP36773 BCEP18194_A4617BCEP18194_A4615BCEP18194_A4618BCEP18194_A4620BCEP18194_A4619BCEP18194_A4616BCEP18194_A4621
BSP107806 BU127BU125BU128BU130BU129BU126BU131
BPSE320373 BURPS668_1714BURPS668_1712BURPS668_1715BURPS668_1717BURPS668_1716BURPS668_1713BURPS668_1718
BPSE320372 BURPS1710B_A2049BURPS1710B_A2047BURPS1710B_A2050BURPS1710B_A2052BURPS1710B_A2051BURPS1710B_A2048BURPS1710B_A2053
BPSE272560 BPSL1943BPSL1945BPSL1942BPSL1940BPSL1941BPSL1944BPSL1939
BPET94624 BPET2834BPET2642BPET2640BPET2641BPET2833BPET2639
BPER257313 BP1497BP2575BP2573BP2574BP1498BP2572
BPAR257311 BPP1963BPP2597BPP2599BPP2598BPP1964BPP2600
BMAL320389 BMA10247_0965BMA10247_0963BMA10247_0966BMA10247_0968BMA10247_0967BMA10247_0964BMA10247_0969
BMAL320388 BMASAVP1_A1537BMASAVP1_A1539BMASAVP1_A1536BMASAVP1_A1534BMASAVP1_A1535BMASAVP1_A1538BMASAVP1_A1533
BMAL243160 BMA_1094BMA_1096BMA_1093BMA_1091BMA_1092BMA_1095BMA_1090
BLIC279010 BL00382BL00356BL00339BL00340BL00357BL02787
BHAL272558 BH3141BH3138BH3110BH3111BH3140BH1309
BCLA66692 ABC3978ABC2687ABC2679ABC2680ABC2689ABC2917
BCIC186490 BCI_0470BCI_0472BCI_0469BCI_0467BCI_0468BCI_0471
BCER572264 BCA_4686BCA_4682BCA_4666BCA_4667BCA_4684BCA_1569
BCER405917 BCE_4707BCE_4704BCE_4686BCE_4687BCE_4706BCE_1637
BCER288681 BCE33L2145BCE33L4315BCE33L4303BCE33L4304BCE33L4317BCE33L1392
BCER226900 BC_4576BC_4573BC_4560BC_4561BC_4575BC_1510
BCEN331272 BCEN2424_1477BCEN2424_1475BCEN2424_1478BCEN2424_1480BCEN2424_1479BCEN2424_1476BCEN2424_1481
BCEN331271 BCEN_0995BCEN_0993BCEN_0996BCEN_0998BCEN_0997BCEN_0994BCEN_0999
BBRO257310 BB2150BB2039BB2041BB2040BB2151BB2042
BAPH372461 BCC_080BCC_078BCC_081BCC_082BCC_079BCC_084
BAPH198804 BUSG119BUSG117BUSG120BUSG122BUSG121BUSG123
BANT592021 BAA_2446BAA_4827BAA_4813BAA_4814BAA_4829BAA_1600
BANT568206 BAMEG_2212BAMEG_4847BAMEG_4833BAMEG_4834BAMEG_4849BAMEG_3062
BANT261594 GBAA4820GBAA4817GBAA4803GBAA4804GBAA4819GBAA1531
BANT260799 BAS4472BAS4469BAS4455BAS4456BAS4471BAS1420
BAMY326423 RBAM_025990RBAM_025910RBAM_025700RBAM_025710RBAM_025930RBAM_020950
BAMB398577 BAMMC406_1401BAMMC406_1399BAMMC406_1402BAMMC406_1404BAMMC406_1403BAMMC406_1400BAMMC406_1405
BAMB339670 BAMB_1361BAMB_1359BAMB_1362BAMB_1364BAMB_1363BAMB_1360BAMB_1365
ASP76114 EBA871EBB25EBA867EBA868EBA870EBA866
ASP62977 ACIAD3055ACIAD3046ACIAD3041ACIAD3042ACIAD3054ACIAD3040
ASP62928 AZO1079AZO1082AZO1084AZO1083AZO1080AZO1085
ASP232721 AJS_2398AJS_2400AJS_2397AJS_2395AJS_2396AJS_2399AJS_2394
ASAL382245 ASA_1955ASA_1953ASA_1956ASA_1958ASA_1957ASA_1954ASA_1959
APLE434271 APJL_0225APJL_0220APJL_0226APJL_0603APJL_0602APJL_0224APJL_0604
APLE416269 APL_0224APL_0219APL_0225APL_0609APL_0608APL_0223APL_0610
AHYD196024 AHA_2325AHA_2327AHA_2324AHA_2322AHA_2323AHA_2326AHA_2321
AFER243159 AFE_0489AFE_0492AFE_0494AFE_0493AFE_0490AFE_0495
AEHR187272 MLG_0768MLG_0765MLG_0763MLG_0764MLG_0767MLG_0762
ACRY349163 ACRY_2196ACRY_2923ACRY_0361ACRY_0362ACRY_0412ACRY_0268
ABOR393595 ABO_2133ABO_1839ABO_1837ABO_1838ABO_1841ABO_1836
ABAU360910 BAV1393BAV2068BAV2066BAV2067BAV1394BAV2065
AAVE397945 AAVE_2859AAVE_2856AAVE_2854AAVE_2855AAVE_2858AAVE_2853


Organism features enriched in list (features available for 247 out of the 261 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00009401517
Arrangment:Pairs 2.647e-669112
Disease:Bubonic_plague 0.005582266
Disease:Dysentery 0.005582266
Disease:Gastroenteritis 0.00961931013
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00006931111
Endospores:No 6.147e-1251211
GC_Content_Range4:0-40 1.934e-859213
GC_Content_Range4:40-60 0.0000956116224
GC_Content_Range4:60-100 0.009577372145
GC_Content_Range7:0-30 0.00255451147
GC_Content_Range7:30-40 0.000011548166
GC_Content_Range7:50-60 0.000027364107
GC_Content_Range7:60-70 0.000834972134
Genome_Size_Range5:0-2 7.652e-2812155
Genome_Size_Range5:4-6 6.312e-19127184
Genome_Size_Range9:1-2 7.339e-276128
Genome_Size_Range9:4-5 9.424e-76296
Genome_Size_Range9:5-6 6.890e-116588
Genome_Size_Range9:6-8 0.00052502638
Gram_Stain:Gram_Neg 5.000e-12181333
Gram_Stain:Gram_Pos 0.000857548150
Habitat:Multiple 0.000449793178
Habitat:Specialized 0.00235661353
Motility:No 2.601e-934151
Motility:Yes 9.799e-12153267
Optimal_temp.:25-30 0.00016221619
Optimal_temp.:30-37 3.515e-61718
Optimal_temp.:35-37 0.00001181313
Optimal_temp.:37 0.000407630106
Oxygen_Req:Anaerobic 2.638e-623102
Oxygen_Req:Facultative 4.816e-10120201
Pathogenic_in:Animal 0.00627733766
Pathogenic_in:No 0.001732880226
Shape:Coccus 0.00321512482
Shape:Rod 4.031e-15192347
Shape:Sphere 0.0023265219
Shape:Spiral 1.279e-6234
Temp._range:Hyperthermophilic 0.0003494223
Temp._range:Mesophilic 0.0002831216473
Temp._range:Psychrophilic 0.005109289
Temp._range:Thermophilic 0.0008268635



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 126
Effective number of orgs (counting one per cluster within 468 clusters): 111

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP64471 ncbi Synechococcus sp. CC93111
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSP1855 Frankia sp. EAN1pec1
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4110
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  EG11231   EG11001   EG10881   EG10710   EG10709   EG10506   EG10440   
WSUC273121 WS1307
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276 TP_0837
TKOD69014
TACI273075
STOK273063
SSP64471 GSYN0843
SSOL273057
SMAR399550
SACI330779
RSP101510
RSAL288705 RSAL33209_0761
RALB246199 GRAORF_1483
PTOR263820
PSP117 RB12197
PLUT319225 PLUT_1957
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NPHA348780
NFAR247156
MTHE349307
MTHE187420
MTBCDC MT1681
MSYN262723
MSTA339860
MSME246196 MSMEG_3793
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358 MLAB_1319
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MAVI243243 MAV_3120
MART243272
MAEO419665
MACE188937
MABS561007 MAB_2323
LXYL281090 LXX18860
LHEL405566 LHV_1581
LBIF456481 LEPBI_I2402
LBIF355278 LBF_2333
KRAD266940 KRAD_3169
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279 HH_0028
HBUT415426
HACI382638
FSP1855 FRANEAN1_1730
FJOH376686 FJOH_2968
DSP255470 CBDBA308
DSP216389 DEHABAV1_0348
DETH243164 DET_0366
CTRA471473 CTLON_0205
CTRA471472 CTL0205
CSUL444179 SMGWSS_260
CPNE182082
CPNE138677 CPJ0990
CPNE115713 CPN0990
CPNE115711 CP_0865
CMUR243161 TC_0221
CMIC443906 CMM_2003
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEI306537
CFEL264202 CF0243
CCHL340177 CAG_0362
CCAV227941 CCA_00771
CABO218497 CAB739
BXEN266265
BTUR314724
BTHE226186 BT_0626
BLON206672
BHER314723
BGAR290434
BFRA295405 BF2565
BFRA272559 BF2590
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
ANAE240017 ANA_1050
AFUL224325
ABUT367737 ABU_2053
AAUR290340 AAUR_1624


Organism features enriched in list (features available for 118 out of the 126 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.002722569
Arrangment:Chains 0.0000160592
Arrangment:Pairs 0.000659011112
Arrangment:Singles 0.000160275286
Disease:Pharyngitis 2.319e-688
Disease:bronchitis_and_pneumonitis 2.319e-688
Endospores:No 6.183e-1681211
Endospores:Yes 0.0000496153
GC_Content_Range7:0-30 0.00004702147
GC_Content_Range7:40-50 0.006356133117
GC_Content_Range7:60-70 0.007577118134
Genome_Size_Range5:0-2 1.263e-1466155
Genome_Size_Range5:4-6 1.432e-912184
Genome_Size_Range9:0-1 7.756e-102027
Genome_Size_Range9:1-2 1.069e-646128
Genome_Size_Range9:4-5 6.942e-6596
Genome_Size_Range9:5-6 0.0005017788
Gram_Stain:Gram_Neg 1.751e-645333
Gram_Stain:Gram_Pos 0.004354820150
Habitat:Multiple 0.000013618178
Habitat:Specialized 0.00257681953
Motility:No 0.002823742151
Optimal_temp.:- 0.000028133257
Optimal_temp.:100 0.008123833
Optimal_temp.:35-40 0.008123833
Optimal_temp.:37 0.000040037106
Optimal_temp.:85 0.001610844
Oxygen_Req:Anaerobic 1.483e-741102
Oxygen_Req:Facultative 0.000014222201
Salinity:Extreme_halophilic 0.004308657
Shape:Irregular_coccus 6.057e-131717
Shape:Rod 8.859e-943347
Shape:Sphere 1.797e-91619
Shape:Spiral 0.00071881534
Temp._range:Hyperthermophilic 1.869e-81723
Temp._range:Mesophilic 0.008067487473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 5
Effective number of orgs (counting one per cluster within 468 clusters): 5

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00035866397
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri) 0.00045263516
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00093227327
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00115877557
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.00630959617


Names of the homologs of the genes in the group in each of these orgs
  EG11231   EG11001   EG10881   EG10710   EG10709   EG10506   EG10440   
BSP107806 BU127BU125BU128BU130BU129BU126BU131
BAPH372461 BCC_080BCC_078BCC_081BCC_082BCC_079BCC_084
CVES412965 COSY_0593COSY_0595COSY_0592COSY_0590COSY_0591COSY_0594COSY_0589
CRUT413404 RMAG_0646RMAG_0648RMAG_0645RMAG_0642RMAG_0643RMAG_0647RMAG_0641
CDES477974 DAUD_1382DAUD_1384DAUD_1381DAUD_1377DAUD_1378DAUD_1383DAUD_0075


Organism features enriched in list (features available for 5 out of the 5 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Genome_Size_Range9:0-1 0.0008180327
Pathogenic_in:No 0.00851775226



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181720.5503
GLYCOCAT-PWY (glycogen degradation I)2461780.4988
PWY-5918 (heme biosynthesis I)2721880.4857
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861920.4712
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001970.4644
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251620.4588
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951470.4582
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761350.4427
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262040.4392
PWY-5386 (methylglyoxal degradation I)3051940.4310
AST-PWY (arginine degradation II (AST pathway))1201020.4267
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831360.4238
PWY-6196 (serine racemization)102900.4156
PWY-5194 (siroheme biosynthesis)3121940.4118
DAPLYSINESYN-PWY (lysine biosynthesis I)3422060.4101
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491160.4086
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371600.4068
TYRFUMCAT-PWY (tyrosine degradation I)1841340.4059
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911840.4049
PWY-1269 (CMP-KDO biosynthesis I)3251980.4028
PWY-561 (superpathway of glyoxylate cycle)1621220.4015
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901830.4012



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11001   EG10881   EG10710   EG10709   EG10506   EG10440   
EG112310.9996320.9996980.9994570.9994670.9996640.999364
EG110010.9998490.9997250.9997350.9999160.999608
EG108810.9999420.9999390.9999690.999652
EG107100.9999920.9998630.999838
EG107090.9998630.999781
EG105060.999543
EG10440



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PAIRWISE BLAST SCORES:

  EG11231   EG11001   EG10881   EG10710   EG10709   EG10506   EG10440   
EG112310.0f0------
EG11001-0.0f0-----
EG10881--0.0f0----
EG10710---0.0f0---
EG10709----0.0f0--
EG10506-----0.0f0-
EG10440------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- TRNA-CHARGING-PWY (tRNA charging pathway) (degree of match pw to cand: 0.028, degree of match cand to pw: 0.429, average score: 0.559)
  Genes in pathway or complex:
             0.3661 0.1057 EG10071 (argS) ARGS-MONOMER (arginyl-tRNA synthetase)
             0.6644 0.3805 EG10196 (cysS) CYSS-MONOMER (cysteinyl-tRNA synthetase)
             0.7140 0.4655 EG10390 (glnS) GLNS-MONOMER (glutaminyl-tRNA synthetase)
             0.6796 0.2911 EG10407 (gltX) GLURS-MONOMER (glutamyl-tRNA synthetase)
             0.2411 0.0822 EG10492 (ileS) ILES-MONOMER (isoleucyl-tRNA synthetase)
             0.6163 0.0016 EG10532 (leuS) LEUS-MONOMER (leucyl-tRNA synthetase)
             0.5751 0.2939 EG11067 (valS) VALS-MONOMER (valyl-tRNA synthetase)
             0.6457 0.3815 EG10034 (alaS) ALAS-MONOMER (alanyl-tRNA synthetase)
             0.9892 0.9790 EG10094 (asnS) ASNS-MONOMER (asparaginyl-tRNA synthetase)
             0.9398 0.8504 EG10097 (aspS) ASPS-MONOMER (aspartyl-tRNA synthetase)
             0.9890 0.9706 EG11043 (tyrS) TYRS-MONOMER (tyrosyl-tRNA synthetase)
             0.4551 0.0023 EG11030 (trpS) TRPS-MONOMER (tryptophanyl-tRNA synthetase)
   *in cand* 0.9998 0.9996 EG11001 (thrS) THRS-MONOMER (threonyl-tRNA synthetase)
             0.7225 0.4145 EG10947 (serS) SERS-MONOMER (seryl-tRNA synthetase)
             0.4020 0.0933 EG10770 (proS) PROS-MONOMER (prolyl-tRNA synthetase)
   *in cand* 0.9998 0.9995 EG10710 (pheT) PHET-MONOMER (phenylalanyl-tRNA synthetase β-chain)
   *in cand* 0.9998 0.9995 EG10709 (pheS) PHES-MONOMER (phenylalanyl-tRNA synthetase α-chain)
             0.7627 0.5882 EG10586 (metG) METG-MONOMER (methionyl-tRNA synthetase)
             0.2892 0.0909 EG10553 (lysU) LYSU-MONOMER (lysyl-tRNA synthetase)
             0.2896 0.0909 EG10552 (lysS) LYSS-MONOMER (lysyl tRNA synthetase (LysRSs), constitutive)
             0.9070 0.6541 EG10453 (hisS) HISS-MONOMER (histidyl-tRNA synthetase)
             0.0613 0.0017 EG10409 (glyQ) GLYQ-MONOMER (glycyl-tRNA synthetase, α subunit)
             0.0767 0.0018 EG10410 (glyS) GLYS-MONOMER (glycyl-tRNA synthetase, β subunit)
                NIL    NIL EG30036 (glyT) glyT-tRNA (tRNAglyT)
                NIL    NIL EG30037 (glyU) glyU-tRNA (tRNAglyU)
                NIL    NIL EG30038 (glyV) glyV-tRNA (tRNAglyV)
                NIL    NIL EG30039 (glyW) glyW-tRNA (tRNAglyW)
                NIL    NIL EG30040 (glyX) glyX-tRNA (tRNAglyX)
                NIL    NIL EG30041 (glyY) glyY-tRNA (tRNAglyY)
                NIL    NIL EG30042 (hisR) hisR-tRNA (tRNAhisR)
                NIL    NIL EG30055 (lysT) lysT-tRNA (tRNAlysT)
                NIL    NIL EG30056 (lysV) lysV-tRNA (tRNAlysV)
                NIL    NIL EG30057 (lysW) lysW-tRNA (tRNAlysW)
                NIL    NIL G6390 (lysY) RNA0-301 (tRNAlysY)
                NIL    NIL G6391 (lysZ) RNA0-302 (tRNAlysZ)
                NIL    NIL G6392 (lysQ) RNA0-303 (tRNAlysQ)
                NIL    NIL EG30058 (metT) metT-tRNA (tRNAmetT)
                NIL    NIL EG30059 (metU) metU-tRNA (tRNAmetU)
                NIL    NIL EG31117 (metW) metW-tRNA (tRNAmetW)
                NIL    NIL EG30060 (metV) RNA0-306 (tRNAmetV)
                NIL    NIL EG30061 (metY) metY-tRNA (tRNAmetY)
                NIL    NIL EG30062 (metZ) metZ-tRNA (tRNAmetZ)
                NIL    NIL EG30064 (pheU) pheU-tRNA (tRNApheU)
                NIL    NIL EG30065 (pheV) pheV-tRNA (tRNApheV)
                NIL    NIL EG30066 (proK) proK-tRNA (tRNAproK)
                NIL    NIL EG30067 (proL) proL-tRNA (tRNAproL)
                NIL    NIL EG30068 (proM) proM-tRNA (tRNAproM)
                NIL    NIL EG30092 (selC) selC-tRNA (tRNAsec)
                NIL    NIL EG30093 (serT) serT-tRNA (tRNAserT)
                NIL    NIL EG30094 (serU) serU-tRNA (tRNAserU)
                NIL    NIL EG30095 (serV) serV-tRNA (tRNAserV)
                NIL    NIL EG30096 (serW) serW-tRNA (tRNAserW)
                NIL    NIL EG30097 (serX) serX-tRNA (tRNAserX)
                NIL    NIL EG30101 (thrT) thrT-tRNA (tRNAthrT)
                NIL    NIL EG30102 (thrU) thrU-tRNA (tRNAthrU)
                NIL    NIL EG30103 (thrV) thrV-tRNA (tRNAthrV)
                NIL    NIL EG30104 (thrW) thrW-tRNA (tRNAthrW)
                NIL    NIL EG30105 (trpT) trpT-tRNA (tRNAtrpT)
                NIL    NIL EG30106 (tyrT) tyrT-tRNA (tRNAtyrT)
                NIL    NIL EG30107 (tyrU) tyrU-tRNA (tRNAtyrU)
                NIL    NIL EG30108 (tyrV) tyrV-tRNA (tRNAtyrV)
                NIL    NIL EG30023 (aspT) aspT-tRNA (tRNAaspT)
                NIL    NIL EG30024 (aspU) aspU-tRNA (tRNAaspU)
                NIL    NIL EG30025 (aspV) aspV-tRNA (tRNAaspV)
                NIL    NIL EG30020 (asnT) asnT-tRNA (tRNAasnT)
                NIL    NIL EG30021 (asnU) asnU-tRNA (tRNAasnU)
                NIL    NIL EG30022 (asnV) asnV-tRNA (tRNAasnV)
                NIL    NIL G7069 (asnW) RNA0-304 (tRNAasnW)
                NIL    NIL EG30008 (alaT) alaT-tRNA (tRNAalaT)
                NIL    NIL EG30009 (alaU) alaU-tRNA (tRNAalaU)
                NIL    NIL EG30010 (alaV) alaV-tRNA (tRNAalaV)
                NIL    NIL EG30011 (alaW) alaW-tRNA (tRNAalaW)
                NIL    NIL EG30012 (alaX) alaX-tRNA (tRNAalaX)
                NIL    NIL EG30109 (valT) valT-tRNA (tRNAvalT)
                NIL    NIL EG30110 (valU) valU-tRNA (tRNAvalU)
                NIL    NIL EG30111 (valV) valV-tRNA (tRNAvalV)
                NIL    NIL EG30112 (valW) valW-tRNA (tRNAvalW)
                NIL    NIL EG30113 (valX) valX-tRNA (tRNAvalX)
                NIL    NIL EG30114 (valY) valY-tRNA (tRNAvalY)
                NIL    NIL G6389 (valZ) RNA0-300 (tRNAvalZ)
                NIL    NIL EG30047 (leuP) leuP-tRNA (tRNAleuP)
                NIL    NIL EG30048 (leuQ) leuQ-tRNA (tRNAleuQ)
                NIL    NIL EG30049 (leuT) leuT-tRNA (tRNAleuT)
                NIL    NIL EG30050 (leuU) leuU-tRNA (tRNAleuU)
                NIL    NIL EG30051 (leuV) leuV-tRNA (tRNAleuV)
                NIL    NIL EG30052 (leuW) leuW-tRNA (tRNAleuW)
                NIL    NIL EG30053 (leuX) leuX-tRNA (tRNAleuX)
                NIL    NIL EG30054 (leuZ) leuZ-tRNA (tRNAleuZ)
                NIL    NIL EG30043 (ileT) ileT-tRNA (tRNAileT)
                NIL    NIL EG30044 (ileU) ileU-tRNA (tRNAileU)
                NIL    NIL EG30045 (ileV) ileV-tRNA (tRNAileV)
                NIL    NIL EG30046 (ileX) ileX-tRNA (tRNAileX)
                NIL    NIL G7387 (ileY) RNA0-305 (tRNAileY)
                NIL    NIL EG30032 (gltT) gltT-tRNA (tRNAgltT)
                NIL    NIL EG30033 (gltU) gltU-tRNA (tRNAgltU)
                NIL    NIL EG30034 (gltV) gltV-tRNA (tRNAgltV)
                NIL    NIL EG30035 (gltW) gltW-tRNA (tRNAgltW)
                NIL    NIL EG30028 (glnU) glnU-tRNA (tRNAglnU)
                NIL    NIL EG30029 (glnV) glnV-tRNA (tRNAglnV)
                NIL    NIL EG30030 (glnW) glnW-tRNA (tRNAglnW)
                NIL    NIL EG30031 (glnX) glnX-tRNA (tRNAglnX)
                NIL    NIL G7991 (cysT) cysT-tRNA (tRNAcysT)
                NIL    NIL EG30013 (argQ) argQ-tRNA (tRNAargQ)
                NIL    NIL EG30014 (argU) argU-tRNA (tRNAargU)
                NIL    NIL EG30015 (argV) argV-tRNA (tRNAargV)
                NIL    NIL EG30016 (argW) argW-tRNA (tRNAargW)
                NIL    NIL EG30017 (argX) argX-tRNA (tRNAargX)
                NIL    NIL EG30018 (argY) argY-tRNA (tRNAargY)
                NIL    NIL EG30019 (argZ) argZ-tRNA (tRNAargZ)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG10440 (ihfA) PD00347 (integration host factor (IHF), α subunit)
   *in cand* 0.9998 0.9995 EG10506 (infC) EG10506-MONOMER (protein chain initiation factor IF-3)
   *in cand* 0.9999 0.9997 EG10881 (rplT) EG10881-MONOMER (50S ribosomal subunit protein L20)
   *in cand* 0.9996 0.9994 EG11231 (rpmI) EG11231-MONOMER (50S ribosomal subunit protein L35)

- CPLX0-3962 (50S ribosomal subunit) (degree of match pw to cand: 0.057, degree of match cand to pw: 0.286, average score: 0.746)
  Genes in pathway or complex:
             0.0053 0.0003 EG11232 (rpmJ) EG11232-MONOMER (50S ribosomal subunit protein L36)
   *in cand* 0.9996 0.9994 EG11231 (rpmI) EG11231-MONOMER (50S ribosomal subunit protein L35)
             0.0130 0.0002 EG10892 (rpmH) EG10892-MONOMER (50S ribosomal subunit protein L34)
             0.0201 0.0002 EG10891 (rpmG) EG10891-MONOMER (50S ribosomal subunit protein L33)
             0.8604 0.4656 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
             0.0416 0.0002 EG10889 (rpmE) EG10889-MONOMER (50S ribosomal subunit protein L31)
             0.0098 0.0002 EG10888 (rpmD) EG10888-MONOMER (50S ribosomal subunit protein L30)
             0.0054 0.0003 EG10887 (rpmC) EG10887-MONOMER (50S ribosomal subunit protein L29)
             0.0266 0.0003 EG10886 (rpmB) EG10886-MONOMER (50S ribosomal subunit protein L28)
             0.1730 0.0002 EG50002 (rpmA) EG50002-MONOMER (50S ribosomal subunit protein L27)
             0.8450 0.7500 EG10885 (rplY) EG10885-MONOMER (50S ribosomal subunit protein L25)
             0.0044 0.0001 EG10884 (rplX) EG10884-MONOMER (50S ribosomal subunit protein L24)
             0.0286 0.0000 EG10883 (rplW) EG10883-MONOMER (50S ribosomal subunit protein L23)
             0.0038 0.0000 EG10882 (rplV) EG10882-MONOMER (50S ribosomal subunit protein L22)
             0.4441 0.0020 EG50001 (rplU) EG50001-MONOMER (50S ribosomal subunit protein L21)
   *in cand* 0.9999 0.9997 EG10881 (rplT) EG10881-MONOMER (50S ribosomal subunit protein L20)
             0.5342 0.0881 EG10880 (rplS) EG10880-MONOMER (50S ribosomal subunit protein L19)
             0.0174 0.0005 EG10879 (rplR) EG10879-MONOMER (50S ribosomal subunit protein L18)
             0.0149 0.0002 EG10878 (rplQ) EG10878-MONOMER (50S ribosomal subunit protein L17)
             0.0141 0.0003 EG10877 (rplP) EG10877-MONOMER (50S ribosomal subunit protein L16)
             0.0052 0.0003 EG10876 (rplO) EG10876-MONOMER (50S ribosomal subunit protein L15)
             0.0170 0.0001 EG10875 (rplN) EG10875-MONOMER (50S ribosomal subunit protein L14)
             0.1649 0.0014 EG10874 (rplM) EG10874-MONOMER (50S ribosomal subunit protein L13)
             0.0427 0.0006 EG10872 (rplK) EG10872-MONOMER (50S ribosomal subunit protein L11)
             0.1740 0.0017 EG10870 (rplI) EG10870-MONOMER (50S ribosomal subunit protein L9)
             0.0176 0.0003 EG10871 (rplJ) EG10871-MONOMER (50S ribosomal subunit protein L10)
             0.0427 0.0001 EG10873 (rplL) MONOMER0-2811 (50S ribosomal subunit protein L7)
             0.0045 0.0001 EG10869 (rplF) EG10869-MONOMER (50S ribosomal subunit protein L6)
             0.0046 0.0001 EG10868 (rplE) EG10868-MONOMER (50S ribosomal subunit protein L5)
             0.0040 0.0000 EG10867 (rplD) EG10867-MONOMER (50S ribosomal subunit protein L4)
             0.0128 0.0001 EG10866 (rplC) EG10866-MONOMER (50S ribosomal subunit protein L3)
             0.0044 0.0001 EG10865 (rplB) EG10865-MONOMER (50S ribosomal subunit protein L2)
             0.0169 0.0009 EG10864 (rplA) EG10864-MONOMER (50S ribosomal subunit protein L1)
                NIL    NIL EG30070 (rrfA) RRFA-RRNA (5S ribosomal RNA (rrfA))
                NIL    NIL EG30077 (rrlA) RRLA-RRNA (23S ribosomal RNA (rrlA))
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG10440 (ihfA) PD00347 (integration host factor (IHF), α subunit)
   *in cand* 0.9998 0.9995 EG10506 (infC) EG10506-MONOMER (protein chain initiation factor IF-3)
   *in cand* 0.9998 0.9995 EG10709 (pheS) PHES-MONOMER (phenylalanyl-tRNA synthetase α-chain)
   *in cand* 0.9998 0.9995 EG10710 (pheT) PHET-MONOMER (phenylalanyl-tRNA synthetase β-chain)
   *in cand* 0.9998 0.9996 EG11001 (thrS) THRS-MONOMER (threonyl-tRNA synthetase)

- CPLX0-3964 (ribosome) (degree of match pw to cand: 0.034, degree of match cand to pw: 0.286, average score: 0.685)
  Genes in pathway or complex:
                NIL    NIL EG30077 (rrlA) RRLA-RRNA (23S ribosomal RNA (rrlA))
                NIL    NIL EG30070 (rrfA) RRFA-RRNA (5S ribosomal RNA (rrfA))
             0.0169 0.0009 EG10864 (rplA) EG10864-MONOMER (50S ribosomal subunit protein L1)
             0.0044 0.0001 EG10865 (rplB) EG10865-MONOMER (50S ribosomal subunit protein L2)
             0.0128 0.0001 EG10866 (rplC) EG10866-MONOMER (50S ribosomal subunit protein L3)
             0.0040 0.0000 EG10867 (rplD) EG10867-MONOMER (50S ribosomal subunit protein L4)
             0.0046 0.0001 EG10868 (rplE) EG10868-MONOMER (50S ribosomal subunit protein L5)
             0.0045 0.0001 EG10869 (rplF) EG10869-MONOMER (50S ribosomal subunit protein L6)
             0.0427 0.0001 EG10873 (rplL) MONOMER0-2811 (50S ribosomal subunit protein L7)
             0.0176 0.0003 EG10871 (rplJ) EG10871-MONOMER (50S ribosomal subunit protein L10)
             0.1740 0.0017 EG10870 (rplI) EG10870-MONOMER (50S ribosomal subunit protein L9)
             0.0427 0.0006 EG10872 (rplK) EG10872-MONOMER (50S ribosomal subunit protein L11)
             0.1649 0.0014 EG10874 (rplM) EG10874-MONOMER (50S ribosomal subunit protein L13)
             0.0170 0.0001 EG10875 (rplN) EG10875-MONOMER (50S ribosomal subunit protein L14)
             0.0052 0.0003 EG10876 (rplO) EG10876-MONOMER (50S ribosomal subunit protein L15)
             0.0141 0.0003 EG10877 (rplP) EG10877-MONOMER (50S ribosomal subunit protein L16)
             0.0149 0.0002 EG10878 (rplQ) EG10878-MONOMER (50S ribosomal subunit protein L17)
             0.0174 0.0005 EG10879 (rplR) EG10879-MONOMER (50S ribosomal subunit protein L18)
             0.5342 0.0881 EG10880 (rplS) EG10880-MONOMER (50S ribosomal subunit protein L19)
   *in cand* 0.9999 0.9997 EG10881 (rplT) EG10881-MONOMER (50S ribosomal subunit protein L20)
             0.4441 0.0020 EG50001 (rplU) EG50001-MONOMER (50S ribosomal subunit protein L21)
             0.0038 0.0000 EG10882 (rplV) EG10882-MONOMER (50S ribosomal subunit protein L22)
             0.0286 0.0000 EG10883 (rplW) EG10883-MONOMER (50S ribosomal subunit protein L23)
             0.0044 0.0001 EG10884 (rplX) EG10884-MONOMER (50S ribosomal subunit protein L24)
             0.8450 0.7500 EG10885 (rplY) EG10885-MONOMER (50S ribosomal subunit protein L25)
             0.1730 0.0002 EG50002 (rpmA) EG50002-MONOMER (50S ribosomal subunit protein L27)
             0.0266 0.0003 EG10886 (rpmB) EG10886-MONOMER (50S ribosomal subunit protein L28)
             0.0054 0.0003 EG10887 (rpmC) EG10887-MONOMER (50S ribosomal subunit protein L29)
             0.0098 0.0002 EG10888 (rpmD) EG10888-MONOMER (50S ribosomal subunit protein L30)
             0.0416 0.0002 EG10889 (rpmE) EG10889-MONOMER (50S ribosomal subunit protein L31)
             0.8604 0.4656 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
             0.0201 0.0002 EG10891 (rpmG) EG10891-MONOMER (50S ribosomal subunit protein L33)
             0.0130 0.0002 EG10892 (rpmH) EG10892-MONOMER (50S ribosomal subunit protein L34)
   *in cand* 0.9996 0.9994 EG11231 (rpmI) EG11231-MONOMER (50S ribosomal subunit protein L35)
             0.0053 0.0003 EG11232 (rpmJ) EG11232-MONOMER (50S ribosomal subunit protein L36)
                NIL    NIL EG30084 (rrsA) RRSA-RRNA (16S ribosomal RNA (rrsA))
             0.9876 0.9691 EG10900 (rpsA) EG10900-MONOMER (30S ribosomal subunit protein S1)
             0.4590 0.1133 EG10901 (rpsB) EG10901-MONOMER (30S ribosomal subunit protein S2)
             0.0141 0.0001 EG10902 (rpsC) EG10902-MONOMER (30S ribosomal subunit protein S3)
             0.0350 0.0016 EG10903 (rpsD) EG10903-MONOMER (30S ribosomal subunit protein S4)
             0.0137 0.0003 EG10904 (rpsE) EG10904-MONOMER (30S ribosomal subunit protein S5)
             0.1619 0.0018 EG10905 (rpsF) EG10905-MONOMER (30S ribosomal subunit protein S6)
             0.0135 0.0003 EG10906 (rpsG) EG10906-MONOMER (30S ribosomal subunit protein S7)
             0.0095 0.0002 EG10907 (rpsH) EG10907-MONOMER (30S ribosomal subunit protein S8)
             0.2044 0.0016 EG10908 (rpsI) EG10908-MONOMER (30S ribosomal subunit protein S9)
             0.0141 0.0000 EG10909 (rpsJ) EG10909-MONOMER (30S ribosomal subunit protein S10)
             0.0182 0.0004 EG10910 (rpsK) EG10910-MONOMER (30S ribosomal subunit protein S11)
             0.0317 0.0000 EG10911 (rpsL) EG10911-MONOMER (30S ribosomal subunit protein S12)
             0.0144 0.0001 EG10912 (rpsM) EG10912-MONOMER (30S ribosomal subunit protein S13)
             0.0045 0.0001 EG10913 (rpsN) EG10913-MONOMER (30S ribosomal subunit protein S14)
             0.7490 0.1658 EG10914 (rpsO) EG10914-MONOMER (30S ribosomal subunit protein S15)
             0.5961 0.0867 EG10915 (rpsP) EG10915-MONOMER (30S ribosomal subunit protein S16)
             0.0041 0.0001 EG10916 (rpsQ) EG10916-MONOMER (30S ribosomal subunit protein S17)
             0.1900 0.0020 EG10917 (rpsR) EG10917-MONOMER (30S ribosomal subunit protein S18)
             0.0037 0.0000 EG10918 (rpsS) EG10918-MONOMER (30S ribosomal subunit protein S19)
             0.5294 0.0563 EG10919 (rpsT) EG10919-MONOMER (30S ribosomal subunit protein S20)
             0.2439 0.0537 EG10920 (rpsU) EG10920-MONOMER (30S ribosomal subunit protein S21)
             0.9184 0.9171 EG11508 (sra) EG11508-MONOMER (30S ribosomal subunit protein S22)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG10440 (ihfA) PD00347 (integration host factor (IHF), α subunit)
   *in cand* 0.9998 0.9995 EG10506 (infC) EG10506-MONOMER (protein chain initiation factor IF-3)
   *in cand* 0.9998 0.9995 EG10709 (pheS) PHES-MONOMER (phenylalanyl-tRNA synthetase α-chain)
   *in cand* 0.9998 0.9995 EG10710 (pheT) PHET-MONOMER (phenylalanyl-tRNA synthetase β-chain)
   *in cand* 0.9998 0.9996 EG11001 (thrS) THRS-MONOMER (threonyl-tRNA synthetase)

- PHES-CPLX (phenylalanyl-tRNA synthetase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.286, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9995 EG10710 (pheT) PHET-MONOMER (phenylalanyl-tRNA synthetase β-chain)
   *in cand* 0.9998 0.9995 EG10709 (pheS) PHES-MONOMER (phenylalanyl-tRNA synthetase α-chain)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG10440 (ihfA) PD00347 (integration host factor (IHF), α subunit)
   *in cand* 0.9998 0.9995 EG10506 (infC) EG10506-MONOMER (protein chain initiation factor IF-3)
   *in cand* 0.9999 0.9997 EG10881 (rplT) EG10881-MONOMER (50S ribosomal subunit protein L20)
   *in cand* 0.9998 0.9996 EG11001 (thrS) THRS-MONOMER (threonyl-tRNA synthetase)
   *in cand* 0.9996 0.9994 EG11231 (rpmI) EG11231-MONOMER (50S ribosomal subunit protein L35)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10440 EG10506 EG10709 EG10710 EG10881 EG11001 EG11231 (centered at EG10881)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11231   EG11001   EG10881   EG10710   EG10709   EG10506   EG10440   
124/623397/623415/623419/623410/623417/623340/623
AAEO224324:0:Tyes---5510588-
AAUR290340:2:Tyes---0---
AAVE397945:0:Tyes-631250
ABAC204669:0:Tyes-40622--03420
ABAU360910:0:Tyes-06736716721670
ABOR393595:0:Tyes-29931250
ABUT367737:0:Tyes----0--
ACAU438753:0:Tyes-035483550-35441361
ACEL351607:0:Tyes---015-
ACRY349163:8:Tyes-1932266792931430
ADEH290397:0:Tyes-13-2360
AEHR187272:0:Tyes-631250
AFER243159:0:Tyes-035416
AHYD196024:0:Tyes4631250
ALAI441768:0:Tyes--586-0--
AMAR234826:0:Tyes-876--0--
AMAR329726:9:Tyes--745-0--
AMET293826:0:Tyes-04982-
ANAE240017:0:Tyes-----0-
AORE350688:0:Tyes-9501--
APHA212042:0:Tyes-1132--0--
APLE416269:0:Tyes5063913904392
APLE434271:0:Tno5063573564358
ASAL382245:5:Tyes2035416
ASP1667:3:Tyes---13-0-
ASP232721:2:Tyes4631250
ASP62928:0:Tyes-035416
ASP62977:0:Tyes-14612130
ASP76114:2:Tyes-631250
AVAR240292:3:Tyes---1030--
BABO262698:1:Tno-26712631266-12600
BAMB339670:3:Tno2035416
BAMB398577:3:Tno2035416
BAMY326423:0:Tyes-5034954744754970
BANT260799:0:Tno-303230293015301630310
BANT261594:2:Tno-302630233009301030250
BANT568206:2:Tyes-02555254125422557841
BANT592021:2:Tno-83631943180318131960
BAPH198804:0:Tyes10243-5
BAPH372461:0:Tyes203-416
BBAC264462:0:Tyes-0-19--20
BBAC360095:0:Tyes-2622620-6480
BBRO257310:0:Tyes-1140211153
BCAN483179:1:Tno-28613281331-13250
BCEN331271:2:Tno2035416
BCEN331272:3:Tyes2035416
BCER226900:1:Tyes-299729942981298229960
BCER288681:0:Tno-74629072895289629090
BCER315749:1:Tyes-1926-1912191319250
BCER405917:1:Tyes-290629032885288629050
BCER572264:1:Tno-308030773061306230790
BCIC186490:0:Tyes352014-
BCLA66692:0:Tyes-129380110237
BFRA272559:1:Tyes---0---
BFRA295405:0:Tno---0---
BHAL272558:0:Tyes-185018471819182018490
BHEN283166:0:Tyes-6793234-0677
BJAP224911:0:Fyes-486820-54343
BLIC279010:0:Tyes-6095995825836010
BMAL243160:1:Tno4631250
BMAL320388:1:Tno4631250
BMAL320389:1:Tyes2035416
BMEL224914:1:Tno-011091106-1112273
BMEL359391:1:Tno-25712131216-12100
BOVI236:1:Tyes-24411291131-11260
BPAR257311:0:Tno-06126146131615
BPER257313:0:Tyes-09899879881986
BPET94624:0:Tyes-2003121990
BPSE272560:1:Tyes4631250
BPSE320372:1:Tno2035416
BPSE320373:1:Tno2035416
BPUM315750:0:Tyes-0177017611762-1256
BQUI283165:0:Tyes-4563234-0454
BSP107806:2:Tyes2035416
BSP36773:2:Tyes2035416
BSP376:0:Tyes-268036-04063
BSUB:0:Tyes-15416266046056280
BSUI204722:1:Tyes-28512991302-12960
BSUI470137:1:Tno-29711171120-11140
BTHA271848:1:Tno4631250
BTHE226186:0:Tyes---0---
BTHU281309:1:Tno-289628932882288328950
BTHU412694:1:Tno-266326602646264726620
BTRI382640:1:Tyes-11204139-01122
BVIE269482:7:Tyes2035416
BWEI315730:4:Tyes-288828852872287328870
CABO218497:0:Tyes-----0-
CACE272562:1:Tyes-63015881
CAULO:0:Tyes-0588-587592921
CBEI290402:0:Tyes-30571464-146614620
CBLO203907:0:Tyes203541-
CBLO291272:0:Tno203541-
CBOT36826:1:Tno-85017399
CBOT441770:0:Tyes-85017398
CBOT441771:0:Tno-2532512462470647
CBOT441772:1:Tno-85017481
CBOT498213:1:Tno-85017410
CBOT508765:1:Tyes--2250-224622520
CBOT515621:2:Tyes-85017409
CBOT536232:0:Tno-85017431
CBUR227377:1:Tyes-631250
CBUR360115:1:Tno-631250
CBUR434922:2:Tno-631250
CCAV227941:1:Tyes-----0-
CCHL340177:0:Tyes------0
CCON360104:2:Tyes--0-540--
CCUR360105:0:Tyes--0-512--
CDES477974:0:Tyes1274127612731269127012750
CDIF272563:1:Tyes-0115128127113-
CDIP257309:0:Tyes--2--0-
CEFF196164:0:Fyes--2--0-
CFEL264202:1:Tyes-----0-
CFET360106:0:Tyes--0-1113--
CGLU196627:0:Tyes--2--0-
CHOM360107:1:Tyes--8-0--
CHUT269798:0:Tyes-508-0---
CHYD246194:0:Tyes1333133513321326132713340
CJAP155077:0:Tyes-631250
CJEJ192222:0:Tyes--0-631--
CJEJ195099:0:Tno--0-658--
CJEJ354242:2:Tyes--0-608--
CJEJ360109:0:Tyes--0-633--
CJEJ407148:0:Tno--0-633--
CKLU431943:1:Tyes-5301--
CMIC443906:2:Tyes----0--
CMUR243161:1:Tyes-----0-
CNOV386415:0:Tyes-712715720719-0
CPEL335992:0:Tyes-03541-
CPER195102:1:Tyes--701-663
CPER195103:0:Tno--5017600
CPER289380:3:Tyes--5017575
CPHY357809:0:Tyes-21972300030010-
CPNE115711:1:Tyes-----0-
CPNE115713:0:Tno-----0-
CPNE138677:0:Tno-----0-
CPRO264201:0:Fyes---0343340-
CPSY167879:0:Tyes-308788286
CRUT413404:0:Tyes5741260
CSAL290398:0:Tyes-035416
CSP501479:6:Fyes---0---
CSP501479:8:Fyes-17830--13721500
CSP78:2:Tyes-33700--51860
CSUL444179:0:Tyes----0--
CTEP194439:0:Tyes-1937-560--0
CTET212717:0:Tyes-8601--
CTRA471472:0:Tyes-----0-
CTRA471473:0:Tno-----0-
CVES412965:0:Tyes4631250
CVIO243365:0:Tyes-035416
DARO159087:0:Tyes4631-50
DDES207559:0:Tyes589591-5865875900
DETH243164:0:Tyes---0---
DGEO319795:1:Tyes--350-01278-
DHAF138119:0:Tyes-55848786820
DNOD246195:0:Tyes-305115102512
DOLE96561:0:Tyes-2185-20282029-0
DPSY177439:2:Tyes-6--2-0
DRAD243230:3:Tyes--0-34781-
DRED349161:0:Tyes-1519152215271526-0
DSHI398580:5:Tyes-55906-9361514
DSP216389:0:Tyes---0---
DSP255470:0:Tno---0---
DVUL882:1:Tyes-5-014-
ECAN269484:0:Tyes-8091-0--
ECAR218491:0:Tyes4631250
ECHA205920:0:Tyes-0180-179--
ECOL199310:0:Tno-63-150
ECOL316407:0:Tno5741260
ECOL331111:6:Tno-641250
ECOL362663:0:Tno4631250
ECOL364106:1:Tno5741260
ECOL405955:2:Tyes-4201--
ECOL409438:6:Tyes4631250
ECOL413997:0:Tno5741260
ECOL439855:4:Tno2035416
ECOL469008:0:Tno2036517
ECOL481805:0:Tno2035416
ECOL585034:0:Tno56412-0
ECOL585035:0:Tno56412-0
ECOL585055:0:Tno56412-0
ECOL585056:2:Tno56412-0
ECOL585057:0:Tno10254-6
ECOL585397:0:Tno56412-0
ECOL83334:0:Tno5741260
ECOLI:0:Tno5741260
ECOO157:0:Tno5741260
EFAE226185:3:Tyes--21941930617
EFER585054:1:Tyes10254-6
ELIT314225:0:Tyes--1056--1650
ERUM254945:0:Tyes-8381-0--
ERUM302409:0:Tno-8331-0--
ESP42895:1:Tyes2035416
FALN326424:0:Tyes--40---
FJOH376686:0:Tyes---0---
FMAG334413:1:Tyes-06-177--
FNOD381764:0:Tyes-67--3860-
FNUC190304:0:Tyes-618-01--
FPHI484022:1:Tyes-30167316722-
FRANT:0:Tno-031681691-
FSP106370:0:Tyes--40-6-
FSP1855:0:Tyes--0----
FSUC59374:0:Tyes-1361--0--
FTUL351581:0:Tno-17717410176-
FTUL393011:0:Tno-15715410156-
FTUL393115:0:Tyes-031661671-
FTUL401614:0:Tyes-30730401306-
FTUL418136:0:Tno-032462471-
FTUL458234:0:Tno-15715410156-
GBET391165:0:Tyes-5994894914905980
GFOR411154:0:Tyes---01091--
GKAU235909:1:Tyes-5045014914925030
GMET269799:1:Tyes-035416
GOXY290633:5:Tyes-7041461441457050
GSUL243231:0:Tyes-035416
GTHE420246:1:Tyes-487484476477-0
GURA351605:0:Tyes-6312-0
GVIO251221:0:Tyes---118213860-
HARS204773:0:Tyes-631250
HAUR316274:2:Tyes--50-6-
HCHE349521:0:Tyes-631250
HDUC233412:0:Tyes272274271122730
HHAL349124:0:Tyes-035416
HHEP235279:0:Tyes----0--
HINF281310:0:Tyes171481810162
HINF374930:0:Tyes1170116133134118132
HINF71421:0:Tno85691072
HMOD498761:0:Tyes-5165275345325250
HNEP81032:0:Tyes-27213750725
HSOM205914:1:Tyes3203117153318
HSOM228400:0:Tno3403317153518
ILOI283942:0:Tyes4631250
JSP290400:1:Tyes-65003-13241340
JSP375286:0:Tyes-035416
KPNE272620:2:Tyes4631250
KRAD266940:2:Fyes-----0-
LACI272621:0:Tyes----518-0
LBIF355278:2:Tyes-0-----
LBIF456481:2:Tno-0-----
LBOR355276:1:Tyes-40----
LBOR355277:1:Tno-10580----
LBRE387344:2:Tyes--245221222-0
LCAS321967:1:Tyes---288289-0
LCHO395495:0:Tyes2035-16
LDEL321956:0:Tyes----015122
LDEL390333:0:Tyes----4404550
LGAS324831:0:Tyes----4714880
LHEL405566:0:Tyes----0--
LINN272626:1:Tno-41073710739890
LINT189518:1:Tyes-04----
LINT267671:1:Tno-40----
LINT363253:3:Tyes-0-431-
LJOH257314:0:Tyes----4865030
LLAC272622:5:Tyes---1551560-
LLAC272623:0:Tyes--086872-
LMES203120:1:Tyes--147---0
LMON169963:0:Tno-33959110593741
LMON265669:0:Tyes-34957310575727
LPLA220668:0:Tyes---37360304
LPNE272624:0:Tno-531240
LPNE297245:1:Fno-631250
LPNE297246:1:Fyes-631250
LPNE400673:0:Tno-035416
LREU557436:0:Tyes--4814594604830
LSAK314315:0:Tyes---3633643850
LSPH444177:1:Tyes-205320502023202420520
LWEL386043:0:Tyes-39662810630784
LXYL281090:0:Tyes-----0-
MABS561007:1:Tyes--0----
MAER449447:0:Tyes---5361940-
MAQU351348:2:Tyes-631250
MAVI243243:0:Tyes----0--
MBOV233413:0:Tno--2--0-
MBOV410289:0:Tno--2--0-
MCAP243233:0:Tyes2035416
MEXT419610:0:Tyes-6974650430
MFLA265072:0:Tyes4631250
MLAB410358:0:Tyes-0-----
MLOT266835:2:Tyes-032063203320532095952
MMAG342108:0:Tyes-040434040-12015
MMAR394221:0:Tyes-226669701395
MPET420662:1:Tyes4631-50
MSME246196:0:Tyes-----0-
MSP164756:1:Tno--0--2-
MSP164757:0:Tno--0--2-
MSP189918:2:Tyes--0--2-
MSP266779:3:Tyes-3373650483
MSP400668:0:Tyes4631250
MSP409:2:Tyes-204210741072107301951
MSUC221988:0:Tyes2033738136
MTBCDC:0:Tno--0----
MTBRV:0:Tno--2--0-
MTHE264732:0:Tyes-163616331627162816350
MTUB336982:0:Tno--2--0-
MTUB419947:0:Tyes--2--0-
MVAN350058:0:Tyes--0--2-
MXAN246197:0:Tyes-2903-2907-02908
NARO279238:0:Tyes--03-18771702
NEUR228410:0:Tyes-631250
NEUT335283:2:Tyes4631250
NGON242231:0:Tyes2038419
NHAM323097:2:Tyes-153620141454
NMEN122586:0:Tno2038419
NMEN122587:0:Tyes2037418
NMEN272831:0:Tno2038419
NMEN374833:0:Tno2037418
NMUL323848:3:Tyes-035-16
NOCE323261:1:Tyes2035416
NSEN222891:0:Tyes-750----
NSP103690:6:Tyes---1140--
NSP35761:1:Tyes----60-
NSP387092:0:Tyes--0-577--
NWIN323098:0:Tyes-199720141357
OANT439375:5:Tyes-139430-61765
OCAR504832:0:Tyes-117920-41441
OIHE221109:0:Tyes-3703663463473680
OTSU357244:0:Fyes-0--297--
PACN267747:0:Tyes----04-
PAER208963:0:Tyes-035416
PAER208964:0:Tno-631250
PARC259536:0:Tyes-1113121120
PATL342610:0:Tyes4631250
PCAR338963:0:Tyes-035416
PCRY335284:1:Tyes-1203121210
PDIS435591:0:Tyes-0-569---
PENT384676:0:Tyes-035416
PFLU205922:0:Tyes-035416
PFLU216595:1:Tyes-631250
PFLU220664:0:Tyes-401324305
PGIN242619:0:Tyes-786-0---
PHAL326442:1:Tyes2035175181516
PING357804:0:Tyes738740737107392
PINT246198:0:Tyes---0---
PINT246198:1:Tyes-----0-
PLUM243265:0:Fyes4631250
PLUT319225:0:Tyes------0
PMAR146891:0:Tyes-0--814--
PMAR167539:0:Tyes-0--283--
PMAR167540:0:Tyes-0--684--
PMAR167542:0:Tyes-0--790--
PMAR167546:0:Tyes-0--834--
PMAR167555:0:Tyes-0--1042--
PMAR59920:0:Tno-0--814--
PMAR74546:0:Tyes-0--779--
PMAR74547:0:Tyes-58--0--
PMAR93060:0:Tyes-0--824--
PMEN399739:0:Tyes-035416
PMOB403833:0:Tyes-631-01--
PMUL272843:1:Tyes100113638935
PNAP365044:8:Tyes-631250
PPEN278197:0:Tyes--223220373
PPRO298386:2:Tyes-731240
PPUT160488:0:Tno-035416
PPUT351746:0:Tyes-631250
PPUT76869:0:Tno-631250
PRUM264731:0:Tyes---218-0-
PSP117:0:Tyes-----0-
PSP296591:2:Tyes-035416
PSP312153:0:Tyes2035-16
PSP56811:2:Tyes-01971951961194
PSTU379731:0:Tyes-631250
PSYR205918:0:Tyes-035416
PSYR223283:2:Tyes-035416
PTHE370438:0:Tyes-187818751871187218770
RAKA293614:0:Fyes-0--280394-
RALB246199:0:Tyes----0--
RBEL336407:0:Tyes-240-3623610-
RBEL391896:0:Fno-0-229230618-
RCAN293613:0:Fyes-0-404405311-
RCAS383372:0:Tyes--26-0-
RCON272944:0:Tno-0-290289480-
RDEN375451:4:Tyes-82703-18392015
RETL347834:5:Tyes--24301263
REUT264198:3:Tyes10243-5
REUT381666:2:Tyes-035416
RFEL315456:2:Tyes-344-10--
RFER338969:1:Tyes-035416
RLEG216596:6:Tyes-226824301381
RMAS416276:1:Tyes-0--217297-
RMET266264:2:Tyes-035416
RPAL258594:0:Tyes-339530252725
RPAL316055:0:Tyes-182540372312
RPAL316056:0:Tyes-277810910510802335
RPAL316057:0:Tyes-313430262552
RPAL316058:0:Tyes-2143031212631
RPOM246200:1:Tyes-022682160-13221185
RPRO272947:0:Tyes-0--194308-
RRIC392021:0:Fno-0--284398-
RRIC452659:0:Tyes-0--301414-
RRUB269796:1:Tyes-1813-1850184918140
RSAL288705:0:Tyes---0---
RSOL267608:1:Tyes-035416
RSP357808:0:Tyes--2--0-
RSPH272943:4:Tyes-167830-182871
RSPH349101:2:Tno-164130-183865
RSPH349102:5:Tyes-51621372140-01565
RTYP257363:0:Tno-0--191305-
RXYL266117:0:Tyes-0-651-
SACI56780:0:Tyes-0-6411127
SAGA205921:0:Tno--4080-410-
SAGA208435:0:Tno--4960-498-
SAGA211110:0:Tyes--5560-558-
SALA317655:1:Tyes--27022545-01160
SARE391037:0:Tyes--2-40-
SAUR158878:1:Tno-54654110543336
SAUR158879:1:Tno-54053610538333
SAUR196620:0:Tno-60660210604342
SAUR273036:0:Tno-52752310525326
SAUR282458:0:Tno-63362810630365
SAUR282459:0:Tno-54253710539342
SAUR359786:1:Tno-53553110533329
SAUR359787:1:Tno-54554110543336
SAUR367830:3:Tno-58958510587324
SAUR418127:0:Tyes-54153710539333
SAUR426430:0:Tno-52852410526334
SAUR93061:0:Fno-65765310655372
SAUR93062:1:Tno-56956510567355
SAVE227882:1:Fyes---6-0-
SBAL399599:3:Tyes432434431104332
SBAL402882:1:Tno330332329103312
SBOY300268:1:Tyes2035416
SCO:2:Fyes--40-6-
SDEG203122:0:Tyes-035416
SDEN318161:0:Tyes108106109101072
SDYS300267:1:Tyes5741260
SELO269084:0:Tyes----6120-
SENT209261:0:Tno2036517
SENT220341:0:Tno5741260
SENT295319:0:Tno4731260
SENT321314:2:Tno2035416
SENT454169:2:Tno2035416
SEPI176279:1:Tyes-51751310515314
SEPI176280:0:Tno-52752310525330
SERY405948:0:Tyes--0--2-
SFLE198214:0:Tyes2036517
SFLE373384:0:Tno2036517
SFUM335543:0:Tyes-418-4234224190
SGLO343509:3:Tyes10243-5
SGOR29390:0:Tyes-025583-253-
SHAE279808:0:Tyes-055815823196
SHAL458817:0:Tyes231229232102302
SHIGELLA:0:Tno2036517
SLAC55218:1:Fyes-154010380-22891828
SLOI323850:0:Tyes1301981992197
SMED366394:3:Tyes-22126172619261826150
SMEL266834:2:Tyes-11622430952
SMUT210007:0:Tyes--27367380-
SONE211586:1:Tyes213211214102122
SPEA398579:0:Tno1302312322230
SPNE1313:0:Tyes-94535020348-
SPNE170187:0:Tyes-101646420462-
SPNE171101:0:Tno--36020358-
SPNE487213:0:Tno-89958520587-
SPNE487214:0:Tno-102436720365-
SPNE488221:0:Tno-97433820336-
SPRO399741:1:Tyes2035416
SPYO160490:0:Tno--330-31-
SPYO186103:0:Tno--340-32-
SPYO193567:0:Tno--033---
SPYO198466:0:Tno--330-31-
SPYO286636:0:Tno--330-31-
SPYO293653:0:Tno--330-31-
SPYO319701:0:Tyes--330-31-
SPYO370551:0:Tno--340-32-
SPYO370552:0:Tno--330-31-
SPYO370553:0:Tno--360-34-
SPYO370554:0:Tyes--350-33-
SRUB309807:1:Tyes----1398-0
SSAP342451:2:Tyes-045755762191
SSED425104:0:Tyes2034934941492
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