CANDIDATE ID: 116

CANDIDATE ID: 116

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9984724e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   5.5714286e-41

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7421 (ygbN) (b2740)
   Products of gene:
     - B2740-MONOMER (YgbN Gnt transporter)

- EG12631 (gntU) (b3435 (obsolete))
   Products of gene:
     - GNTU-MONOMER (GntU gluconate Gnt transporter)
       Reactions:
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]

- EG12563 (gntP) (b4321)
   Products of gene:
     - GNTP-MONOMER (GntP Gluconate Gnt transporter)
       Reactions:
        D-fructuronate[periplasmic space] + H+[periplasmic space]  ->  D-fructuronate[cytosol] + H+[cytosol]
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]

- EG12548 (yjhF) (b4296)
   Products of gene:
     - YJHF-MONOMER (YjhF Gnt tranporter)

- EG12539 (idnT) (b4265)
   Products of gene:
     - YJGT-MONOMER (L-idonate / 5-ketogluconate / gluconate transporter)
       Reactions:
        5-dehydro-D-gluconate[periplasmic space] + H+[periplasmic space]  ->  5-dehydro-D-gluconate[cytosol] + H+[cytosol]
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]
        L-idonate[periplasmic space] + H+[periplasmic space]  ->  L-idonate[cytosol] + H+[cytosol]

- EG12380 (gntT) (b3415)
   Products of gene:
     - GNTT-MONOMER (GntT Gluconate Gnt transporter)
       Reactions:
        D-gluconate[periplasmic space] + H+[periplasmic space]  ->  D-gluconate[cytosol] + H+[cytosol]

- EG10250 (dsdX) (b2365)
   Products of gene:
     - DSDX-MONOMER (DsdX Gnt tranporter)



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 198
Effective number of orgs (counting one per cluster within 468 clusters): 123

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM47
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XAUT78245 ncbi Xanthobacter autotrophicus Py27
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
TSP1755 Thermoanaerobacter sp.6
TLET416591 ncbi Thermotoga lettingae TMO6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
STHE292459 ncbi Symbiobacterium thermophilum IAM 148637
SSON300269 ncbi Shigella sonnei Ss0467
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153057
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14357
SGLO343509 ncbi Sodalis glossinidius morsitans7
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23387
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122287
SEPI176279 ncbi Staphylococcus epidermidis RP62A7
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SDYS300267 ncbi Shigella dysenteriae Sd1977
SDEG203122 ncbi Saccharophagus degradans 2-407
SCO ncbi Streptomyces coelicolor A3(2)7
SBOY300268 ncbi Shigella boydii Sb2277
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
SAVE227882 ncbi Streptomyces avermitilis MA-46807
SAUR93062 ncbi Staphylococcus aureus aureus COL7
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83257
SAUR426430 ncbi Staphylococcus aureus aureus Newman7
SAUR418127 ncbi Staphylococcus aureus aureus Mu37
SAUR367830 Staphylococcus aureus aureus USA3007
SAUR359787 ncbi Staphylococcus aureus aureus JH17
SAUR359786 ncbi Staphylococcus aureus aureus JH97
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4767
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2527
SAUR273036 ncbi Staphylococcus aureus RF1227
SAUR196620 ncbi Staphylococcus aureus aureus MW27
SAUR158879 ncbi Staphylococcus aureus aureus N3157
SAUR158878 ncbi Staphylococcus aureus aureus Mu507
RSP101510 ncbi Rhodococcus jostii RHA17
RSOL267608 ncbi Ralstonia solanacearum GMI10007
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332097
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111707
RMET266264 ncbi Ralstonia metallidurans CH347
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30007
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PPUT76869 ncbi Pseudomonas putida GB-17
PPUT351746 ncbi Pseudomonas putida F17
PPUT160488 ncbi Pseudomonas putida KT24407
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257457
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMOB403833 ncbi Petrotoga mobilis SJ957
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-17
PENT384676 ncbi Pseudomonas entomophila L487
PDIS435591 ncbi Parabacteroides distasonis ATCC 85037
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
PACN267747 ncbi Propionibacterium acnes KPA1712027
OIHE221109 ncbi Oceanobacillus iheyensis HTE8317
OANT439375 ncbi Ochrobactrum anthropi ATCC 491887
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NGON242231 ncbi Neisseria gonorrhoeae FA 10906
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-16
MTHE264732 ncbi Moorella thermoacetica ATCC 390737
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E7
MSP164757 ncbi Mycobacterium sp. JLS6
MSME246196 ncbi Mycobacterium smegmatis MC2 1557
MMAR394221 ncbi Maricaulis maris MCS106
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK6
MABS561007 ncbi Mycobacterium abscessus ATCC 199777
LSPH444177 ncbi Lysinibacillus sphaericus C3-417
LSAK314315 ncbi Lactobacillus sakei sakei 23K7
LREU557436 ncbi Lactobacillus reuteri DSM 200166
LPLA220668 ncbi Lactobacillus plantarum WCFS17
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82937
LCAS321967 ncbi Lactobacillus casei ATCC 3347
LBRE387344 ncbi Lactobacillus brevis ATCC 3677
KRAD266940 ncbi Kineococcus radiotolerans SRS302167
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HMOD498761 ncbi Heliobacterium modesticaldum Ice17
HINF71421 ncbi Haemophilus influenzae Rd KW207
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-27
GOXY290633 ncbi Gluconobacter oxydans 621H7
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255867
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B16
FJOH376686 ncbi Flavobacterium johnsoniae UW1017
ESP42895 Enterobacter sp.7
EFER585054 ncbi Escherichia fergusonii ATCC 354697
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a7
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A7
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CPHY357809 ncbi Clostridium phytofermentans ISDg7
CNOV386415 ncbi Clostridium novyi NT7
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3827
CMIC31964 ncbi Clavibacter michiganensis sepedonicus7
CJAP155077 Cellvibrio japonicus7
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334066
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130327
CEFF196164 ncbi Corynebacterium efficiens YS-3147
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131297
CDIF272563 ncbi Clostridium difficile 6307
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto7
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6577
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B7
CBOT498213 ncbi Clostridium botulinum B1 str. Okra7
CBOT441772 ncbi Clostridium botulinum F str. Langeland7
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193977
CBOT36826 Clostridium botulinum A7
CACE272562 ncbi Clostridium acetobutylicum ATCC 8247
BXEN266265 ncbi Burkholderia xenovorans LB4007
BWEI315730 ncbi Bacillus weihenstephanensis KBAB47
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHU412694 ncbi Bacillus thuringiensis Al Hakam7
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-277
BTHA271848 ncbi Burkholderia thailandensis E2647
BSUB ncbi Bacillus subtilis subtilis 1687
BSP36773 Burkholderia sp.7
BPUM315750 ncbi Bacillus pumilus SAFR-0327
BPSE320373 ncbi Burkholderia pseudomallei 6687
BPSE320372 ncbi Burkholderia pseudomallei 1710b7
BPSE272560 ncbi Burkholderia pseudomallei K962437
BMAL320389 ncbi Burkholderia mallei NCTC 102477
BMAL320388 ncbi Burkholderia mallei SAVP17
BMAL243160 ncbi Burkholderia mallei ATCC 233447
BLIC279010 ncbi Bacillus licheniformis ATCC 145807
BHAL272558 ncbi Bacillus halodurans C-1257
BCLA66692 ncbi Bacillus clausii KSM-K167
BCER572264 ncbi Bacillus cereus 03BB1027
BCER405917 Bacillus cereus W7
BCER315749 ncbi Bacillus cytotoxicus NVH 391-987
BCER288681 ncbi Bacillus cereus E33L7
BCER226900 ncbi Bacillus cereus ATCC 145797
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BANT592021 ncbi Bacillus anthracis A02487
BANT568206 ncbi Bacillus anthracis CDC 6847
BANT261594 ncbi Bacillus anthracis Ames Ancestor7
BANT260799 ncbi Bacillus anthracis Sterne7
BAMY326423 ncbi Bacillus amyloliquefaciens FZB427
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
ASP62977 ncbi Acinetobacter sp. ADP17
ASP1667 Arthrobacter sp.7
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AORE350688 ncbi Alkaliphilus oremlandii OhILAs7
AHYD196024 Aeromonas hydrophila dhakensis7
AAUR290340 ncbi Arthrobacter aurescens TC17


Names of the homologs of the genes in the group in each of these orgs
  G7421   EG12631   EG12563   EG12548   EG12539   EG12380   EG10250   
ZMOB264203 ZMO1756ZMO1756ZMO1756ZMO1756ZMO1756ZMO1756ZMO1756
YPSE349747 YPSIP31758_4021YPSIP31758_4021YPSIP31758_0693YPSIP31758_4021YPSIP31758_4021YPSIP31758_4021YPSIP31758_4021
YPSE273123 YPTB3797YPTB3797YPTB3287YPTB3797YPTB3797YPTB3797YPTB3797
YPES386656 YPDSF_3319YPDSF_3319YPDSF_3319YPDSF_3319YPDSF_3319YPDSF_3319YPDSF_3319
YPES377628 YPN_3603YPN_3603YPN_3207YPN_3603YPN_3603YPN_3603YPN_3603
YPES360102 YPA_3783YPA_3783YPA_3383YPA_3783YPA_3783YPA_3783YPA_3783
YPES349746 YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4105YPANGOLA_A4105
YPES214092 YPO3954YPO3954YPO0767YPO3954YPO3954YPO3954YPO3954
YPES187410 Y3875Y3875Y3426Y3875Y3875Y3875Y3875
YENT393305 YE4021YE4021YE1023YE4021YE4021YE4021YE4021
XAUT78245 XAUT_1234XAUT_1234XAUT_1234XAUT_1234XAUT_1234XAUT_1234XAUT_1234
VVUL216895 VV1_1101VV1_1101VV1_1101VV1_1101VV1_1101VV1_1101
VVUL196600 VV0061VV0061VV0061VV0061VV0061VV0061
VPAR223926 VP0064VP0064VP0064VP0064VP0064VP0064VPA0116
VCHO345073 VC0395_A2664VC0395_A2664VC0395_A2664VC0395_A2664VC0395_A2664VC0395_A2664VC0395_0333
VCHO VC0286VC0286VC0286VC0286VC0286VC0286VCA0904
TSP1755 TETH514_1895TETH514_1895TETH514_1895TETH514_1895TETH514_1895TETH514_1895
TLET416591 TLET_1725TLET_1725TLET_1725TLET_1725TLET_1725TLET_1725
STYP99287 STM3541STM3541STM3512STM4482STM4482STM3512STM3801
STHE292459 STH2301STH2301STH2301STH2301STH2301STH2301STH2301
SSON300269 SSO_2888SSO_3678SSO_3547SSO_4450SSO_4450SSO_3547SSO_3547
SSAP342451 SSP0412SSP0412SSP0412SSP0412SSP0412SSP0412SSP0412
SPRO399741 SPRO_1488SPRO_4498SPRO_4651SPRO_4651SPRO_4651SPRO_4651SPRO_2450
SPEA398579 SPEA_3450SPEA_3450SPEA_3450SPEA_3450SPEA_3450SPEA_3450SPEA_3450
SHIGELLA GNTTGNTUGNTPGNTTGNTTGNTTGNTT
SHAL458817 SHAL_3562SHAL_3562SHAL_3562SHAL_3562SHAL_3562SHAL_3562SHAL_3562
SHAE279808 SH0576SH0576SH0576SH0576SH0576SH0576SH0576
SGLO343509 SG2332SG2332SG2332SG2332SG2332SG2332SG2332
SFLE373384 SFV_3423SFV_3423SFV_4205SFV_3423SFV_3423SFV_3423SFV_3423
SFLE198214 AAN44918.1AAN44918.1AAN45620.1AAN44899.1AAN44899.1AAN44899.1AAN44899.1
SERY405948 SACE_5302SACE_5302SACE_3358SACE_5302SACE_5302SACE_5302SACE_5302
SEPI176280 SE_2044SE_2044SE_2044SE_2044SE_2044SE_2044SE_2044
SEPI176279 SERP2057SERP2057SERP2057SERP2057SERP2057SERP2057SERP2057
SENT454169 SEHA_C3850SEHA_C3850SEHA_C3820SEHA_C4886SEHA_C4886SEHA_C3820SEHA_C4131
SENT321314 SCH_3471SCH_3471SCH_3444SCH_4338SCH_4338SCH_3444SCH_3723
SENT295319 SPA3392SPA3392SPA3377SPA4282SPA4282SPA3377SPA3652
SENT220341 STY4270STY4270STY4284STY4284STY4284STY4284STY3978
SENT209261 T3979T3979T3994T3994T3994T3994T3716
SDYS300267 SDY_3587SDY_3587SDY_3661SDY_3661SDY_3661SDY_3661SDY_3661
SDEG203122 SDE_1892SDE_1892SDE_1892SDE_1892SDE_1892SDE_1892SDE_1892
SCO SCO4991SCO4991SCO4991SCO4991SCO4991SCO4991SCO4991
SBOY300268 SBO_2780SBO_3433SBO_3404SBO_3404SBO_3404SBO_3404SBO_3404
SBAL402882 SHEW185_4057SHEW185_4057SHEW185_4057SHEW185_4057SHEW185_4057SHEW185_4057SHEW185_4057
SBAL399599 SBAL195_4175SBAL195_4175SBAL195_4175SBAL195_4175SBAL195_4175SBAL195_4175SBAL195_4175
SAVE227882 SAV3277SAV6628SAV6628SAV6628SAV6628SAV6628SAV6628
SAUR93062 SACOL2514SACOL2514SACOL2514SACOL2514SACOL2514SACOL2514SACOL2514
SAUR93061 SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806SAOUHSC_02806
SAUR426430 NWMN_2401NWMN_2401NWMN_2401NWMN_2401NWMN_2401NWMN_2401NWMN_2401
SAUR418127 SAHV_2489SAHV_2489SAHV_2489SAHV_2489SAHV_2489SAHV_2489SAHV_2489
SAUR367830 SAUSA300_2442SAUSA300_2442SAUSA300_2442SAUSA300_2442SAUSA300_2442SAUSA300_2442SAUSA300_2442
SAUR359787 SAURJH1_2580SAURJH1_2580SAURJH1_2580SAURJH1_2580SAURJH1_2580SAURJH1_2580SAURJH1_2580
SAUR359786 SAURJH9_2528SAURJH9_2528SAURJH9_2528SAURJH9_2528SAURJH9_2528SAURJH9_2528SAURJH9_2528
SAUR282459 SAS2390SAS2390SAS2390SAS2390SAS2390SAS2390SAS2390
SAUR282458 SAR2582SAR2582SAR2582SAR2582SAR2582SAR2582SAR2582
SAUR273036 SAB2377CSAB2377CSAB2377CSAB2377CSAB2377CSAB2377CSAB2377C
SAUR196620 MW2423MW2423MW2423MW2423MW2423MW2423MW2423
SAUR158879 SA2293SA2293SA2293SA2293SA2293SA2293SA2293
SAUR158878 SAV2505SAV2505SAV2505SAV2505SAV2505SAV2505SAV2505
RSP101510 RHA1_RO02465RHA1_RO02465RHA1_RO02363RHA1_RO02363RHA1_RO02363RHA1_RO02363RHA1_RO02363
RSOL267608 RSP1189RSP1189RSP1189RSP1189RSP1189RSP1189RSP1189
RSAL288705 RSAL33209_0835RSAL33209_2176RSAL33209_2014RSAL33209_2014RSAL33209_2014RSAL33209_2014RSAL33209_2014
RRUB269796 RRU_A3140RRU_A3140RRU_A3140RRU_A3140RRU_A3140RRU_A3140RRU_A3140
RMET266264 RMET_4774RMET_4774RMET_4774RMET_4774RMET_4774RMET_4774RMET_4774
REUT381666 H16_A3011H16_B1207H16_B1207H16_B1207H16_B1207H16_B1207H16_B1207
REUT264198 REUT_B4018REUT_B4018REUT_B4018REUT_B4018REUT_B4018REUT_B4018REUT_B4018
PSYR223283 PSPTO_3565PSPTO_3565PSPTO_3565PSPTO_3565PSPTO_3565PSPTO_3565PSPTO_3565
PSYR205918 PSYR_3338PSYR_3338PSYR_3338PSYR_3338PSYR_3338PSYR_3338PSYR_3338
PPUT76869 PPUTGB1_2523PPUTGB1_2523PPUTGB1_2523PPUTGB1_2523PPUTGB1_2523PPUTGB1_2523PPUTGB1_3111
PPUT351746 PPUT_2345PPUT_2345PPUT_2345PPUT_2345PPUT_2345PPUT_2345PPUT_3069
PPUT160488 PP_3417PP_3417PP_3417PP_3417PP_3417PP_3417PP_3417
PPEN278197 PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360
PMUL272843 PM0793PM0793PM0793PM0793PM0793PM0793PM1359
PMOB403833 PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535
PLUM243265 PLU0498PLU0498PLU1969PLU1969PLU0498PLU1969PLU1969
PHAL326442 PSHAB0479PSHAB0479PSHAB0479PSHAB0479PSHAB0479PSHAB0479PSHAB0479
PFLU220664 PFL_3343PFL_4579PFL_4579PFL_4579PFL_4579PFL_4579PFL_4579
PFLU216595 PFLU2355PFLU4810PFLU4810PFLU4810PFLU4810PFLU4810PFLU4810
PFLU205922 PFL_4335PFL_4335PFL_4335PFL_4335PFL_4335PFL_4335PFL_4335
PENT384676 PSEEN2420PSEEN2420PSEEN2420PSEEN2420PSEEN2420PSEEN2420PSEEN2420
PDIS435591 BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331
PATL342610 PATL_2267PATL_2267PATL_2267PATL_2267PATL_2267PATL_2267
PAER208964 PA2322PA2322PA2322PA2322PA2322PA2322PA2322
PAER208963 PA14_34630PA14_34630PA14_34630PA14_34630PA14_34630PA14_34630PA14_34630
PACN267747 PPA0738PPA0738PPA0738PPA0738PPA0738PPA0738PPA0738
OIHE221109 OB2216OB2216OB3188OB3188OB3188OB3188OB3188
OANT439375 OANT_4271OANT_4271OANT_4271OANT_4271OANT_4271OANT_4271OANT_4271
NMEN374833 NMCC_0172NMCC_0172NMCC_0172NMCC_0172NMCC_0172NMCC_0172
NMEN272831 NMC2006NMC2006NMC2006NMC2006NMC2006NMC2006
NMEN122587 NMA0413NMA0413NMA0413NMA0413NMA0413NMA0413
NMEN122586 NMB_2027NMB_2027NMB_2027NMB_2027NMB_2027NMB_2027
NGON242231 NGO2077NGO2077NGO2077NGO2077NGO2077NGO2077
MVAN350058 MVAN_5912MVAN_5912MVAN_5912MVAN_5912MVAN_5912MVAN_5912
MTHE264732 MOTH_0728MOTH_0728MOTH_0728MOTH_0728MOTH_0728MOTH_0728MOTH_0895
MSUC221988 MS1977MS1977MS0335MS0688MS1977MS1977MS1977
MSP164757 MJLS_5708MJLS_5708MJLS_5708MJLS_5708MJLS_5708MJLS_5708
MSME246196 MSMEG_3789MSMEG_3789MSMEG_0452MSMEG_3789MSMEG_3789MSMEG_3789MSMEG_3789
MMAR394221 MMAR10_2727MMAR10_2727MMAR10_2727MMAR10_2727MMAR10_2727MMAR10_2727
MGIL350054 MFLV_0503MFLV_0503MFLV_0503MFLV_0503MFLV_0503MFLV_0503
MABS561007 MAB_3634CMAB_3634CMAB_3634CMAB_3634CMAB_3634CMAB_3634CMAB_3634C
LSPH444177 BSPH_4719BSPH_4719BSPH_4719BSPH_4719BSPH_4719BSPH_4719BSPH_4719
LSAK314315 LSA0299LSA0299LSA0299LSA0299LSA0299LSA0299LSA0299
LREU557436 LREU_0795LREU_0795LREU_0795LREU_0795LREU_0795LREU_0795
LPLA220668 LP_1249LP_1249LP_1249LP_1249LP_1249LP_1249LP_1249
LMES203120 LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923
LCAS321967 LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229
LBRE387344 LVIS_1586LVIS_1576LVIS_1586LVIS_1586LVIS_1586LVIS_1586LVIS_1586
KRAD266940 KRAD_3894KRAD_3894KRAD_3894KRAD_3894KRAD_3894KRAD_3894KRAD_3894
KPNE272620 GKPORF_B0660GKPORF_B3144GKPORF_B3127GKPORF_B3127GKPORF_B3127GKPORF_B3127GKPORF_B3436
HSOM228400 HSM_0701HSM_0701HSM_0701HSM_0701HSM_0701HSM_0701HSM_1891
HSOM205914 HS_0378HS_0378HS_0378HS_1717HS_1717HS_1717HS_1717
HMOD498761 HM1_2671HM1_2671HM1_2671HM1_2671HM1_2671HM1_2671HM1_2671
HINF71421 HI_1015HI_1015HI_1015HI_1015HI_1015HI_1015HI_1015
GTHE420246 GTNG_1835GTNG_1835GTNG_1835GTNG_1835GTNG_1835GTNG_1835GTNG_1835
GOXY290633 GOX2188GOX2188GOX2188GOX2188GOX2188GOX2188GOX2188
FNUC190304 FN0225FN0225FN0225FN0225FN0225FN0225FN0225
FNOD381764 FNOD_1252FNOD_1252FNOD_1252FNOD_1252FNOD_1252FNOD_1252
FJOH376686 FJOH_0667FJOH_0667FJOH_0667FJOH_0667FJOH_0667FJOH_0667FJOH_0667
ESP42895 ENT638_3844ENT638_3844ENT638_3828ENT638_3828ENT638_3828ENT638_3828ENT638_3828
EFER585054 EFER_3412EFER_3412EFER_3384EFER_3384EFER_3384EFER_3384EFER_3972
ECOO157 GNTUGNTUGNTPGNTTGNTTGNTTGNTT
ECOL83334 ECS4285ECS4285ECS5280ECS4257ECS4257ECS4257ECS4257
ECOL585397 ECED1_3193ECED1_4110ECED1_4076ECED1_4076ECED1_4076ECED1_4076ECED1_2812
ECOL585057 ECIAI39_3918ECIAI39_3918ECIAI39_4794ECIAI39_4738ECIAI39_4738ECIAI39_3896ECIAI39_4220
ECOL585056 ECUMN_3899ECUMN_3899ECUMN_4928ECUMN_4895ECUMN_4797ECUMN_3874ECUMN_3874
ECOL585055 EC55989_3007EC55989_3845EC55989_4985EC55989_4823EC55989_4823EC55989_3823EC55989_3823
ECOL585035 ECS88_3007ECS88_3833ECS88_4939ECS88_4907ECS88_3804ECS88_3804ECS88_2559
ECOL585034 ECIAI1_2835ECIAI1_3581ECIAI1_4537ECIAI1_3559ECIAI1_3559ECIAI1_3559ECIAI1_3559
ECOL481805 ECOLC_0972ECOLC_0277ECOLC_0298ECOLC_0298ECOLC_0298ECOLC_0298ECOLC_1304
ECOL469008 ECBD_0984ECBD_0307ECBD_3714ECBD_0330ECBD_3771ECBD_0330ECBD_1307
ECOL439855 ECSMS35_3719ECSMS35_3719ECSMS35_4848ECSMS35_4746ECSMS35_4746ECSMS35_3696ECSMS35_2515
ECOL413997 ECB_02590ECB_03287ECB_04190ECB_04131ECB_04131ECB_03267ECB_02275
ECOL409438 ECSE_2988ECSE_3704ECSE_4594ECSE_3682ECSE_3682ECSE_3682ECSE_3682
ECOL405955 APECO1_37842APECO1_3022APECO1_3051APECO1_2129APECO1_2129APECO1_3051APECO1_4171
ECOL364106 UTI89_C3106UTI89_C3944UTI89_C3916UTI89_C4872UTI89_C4872UTI89_C3916UTI89_C4956
ECOL362663 ECP_2719ECP_3531ECP_3501ECP_4514ECP_4514ECP_3501ECP_4591
ECOL331111 ECE24377A_3037ECE24377A_3914ECE24377A_4919ECE24377A_3891ECE24377A_3891ECE24377A_3891ECE24377A_3891
ECOL316407 ECK2735:JW2710:B2740ECK3421:JW5686:B4476ECK4312:JW4284:B4321ECK4285:JW4258:B4296ECK4258:JW4222:B4265ECK3402:JW5690:B3415ECK2361:JW2362:B2365
ECOL199310 C3301C4224C5401C5366C5366C4192C2900
ECAR218491 ECA4331ECA1840ECA1840ECA1840ECA1840ECA1840ECA1840
CSAL290398 CSAL_0925CSAL_0925CSAL_0925CSAL_0925CSAL_0925CSAL_0925CSAL_0925
CPHY357809 CPHY_3831CPHY_3831CPHY_3831CPHY_3831CPHY_3831CPHY_3831CPHY_3831
CNOV386415 NT01CX_0634NT01CX_0634NT01CX_0634NT01CX_0634NT01CX_0634NT01CX_0634NT01CX_0634
CMIC443906 CMM_2908CMM_2908CMM_2908CMM_2908CMM_2908CMM_2908CMM_2908
CMIC31964 CMS3035CMS3035CMS3035CMS3035CMS3035CMS3035CMS3035
CJAP155077 CJA_0346CJA_0346CJA_0346CJA_0346CJA_0346CJA_0346CJA_0346
CHUT269798 CHU_1403CHU_1403CHU_1403CHU_1403CHU_1403CHU_1403
CGLU196627 CG3216CG3216CG3216CG3216CG3216CG3216CG3216
CEFF196164 CE0611CE0611CE0611CE0611CE0611CE0611CE0611
CDIP257309 DIP2078DIP0253DIP0253DIP0253DIP0253DIP0253DIP0253
CDIF272563 CD2812CD2812CD2812CD2812CD2812CD2812CD2812
CBOT536232 CLM_2408CLM_2408CLM_2408CLM_2408CLM_2408CLM_2408CLM_2408
CBOT515621 CLJ_B2415CLJ_B2415CLJ_B2415CLJ_B2415CLJ_B2415CLJ_B2415CLJ_B2415
CBOT508765 CLL_A1311CLL_A1311CLL_A1311CLL_A1311CLL_A1311CLL_A1311CLL_A1311
CBOT498213 CLD_2371CLD_2371CLD_2371CLD_2371CLD_2371CLD_2371CLD_2371
CBOT441772 CLI_2253CLI_2253CLI_2253CLI_2253CLI_2253CLI_2253CLI_2253
CBOT441770 CLB_2146CLB_2146CLB_2146CLB_2146CLB_2146CLB_2146CLB_2146
CBOT36826 CBO2207CBO2207CBO2207CBO2207CBO2207CBO2207CBO2207
CACE272562 CAC3605CAC3605CAC3605CAC3605CAC3605CAC3605CAC3605
BXEN266265 BXE_B3032BXE_B3032BXE_B3032BXE_B3032BXE_B3032BXE_B3032BXE_B3032
BWEI315730 BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094BCERKBAB4_2094
BVIE269482 BCEP1808_0630BCEP1808_0630BCEP1808_0630BCEP1808_0630BCEP1808_0630BCEP1808_0630BCEP1808_0630
BTHU412694 BALH_0161BALH_0161BALH_0161BALH_0161BALH_0161BALH_0161BALH_3048
BTHU281309 BT9727_0158BT9727_0158BT9727_0158BT9727_0158BT9727_0158BT9727_0158BT9727_0158
BTHA271848 BTH_I1219BTH_I1219BTH_I1219BTH_I1219BTH_I1219BTH_I1219BTH_I1219
BSUB BSU19520BSU40070BSU19520BSU40070BSU40070BSU40070BSU40070
BSP36773 BCEP18194_A3748BCEP18194_A3748BCEP18194_A3748BCEP18194_A3748BCEP18194_A3748BCEP18194_A3748BCEP18194_A3748
BPUM315750 BPUM_3601BPUM_3601BPUM_3561BPUM_3561BPUM_3561BPUM_3561BPUM_3601
BPSE320373 BURPS668_3404BURPS668_3404BURPS668_3404BURPS668_3404BURPS668_3404BURPS668_3404BURPS668_3404
BPSE320372 BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3717BURPS1710B_A3717
BPSE272560 BPSL2930BPSL2930BPSL2930BPSL2930BPSL2930BPSL2930BPSL2930
BMAL320389 BMA10247_2629BMA10247_2629BMA10247_2629BMA10247_2629BMA10247_2629BMA10247_2629BMA10247_2629
BMAL320388 BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0360BMASAVP1_A0360
BMAL243160 BMA_2444BMA_2444BMA_2444BMA_2444BMA_2444BMA_2444BMA_2444
BLIC279010 BL00197BL00197BL00197BL00197BL00197BL00197BL00197
BHAL272558 BH0805BH0805BH0805BH0805BH0805BH0805BH0805
BCLA66692 ABC1109ABC1109ABC1109ABC1109ABC1109ABC1109ABC1109
BCER572264 BCA_0206BCA_0206BCA_0206BCA_0206BCA_0206BCA_0206BCA_3465
BCER405917 BCE_2303BCE_2303BCE_2303BCE_2303BCE_2303BCE_2303BCE_2303
BCER315749 BCER98_1664BCER98_1664BCER98_1664BCER98_1664BCER98_1664BCER98_1664BCER98_1664
BCER288681 BCE33L0156BCE33L0156BCE33L0156BCE33L0156BCE33L0156BCE33L0156BCE33L0156
BCER226900 BC_2224BC_2224BC_2224BC_2224BC_2224BC_2224BC_2224
BCEN331272 BCEN2424_0662BCEN2424_0662BCEN2424_0662BCEN2424_0662BCEN2424_0662BCEN2424_0662BCEN2424_0662
BCEN331271 BCEN_0179BCEN_0179BCEN_0179BCEN_0179BCEN_0179BCEN_0179BCEN_0179
BANT592021 BAA_0194BAA_0194BAA_0194BAA_0194BAA_0194BAA_0194BAA_0194
BANT568206 BAMEG_0194BAMEG_0194BAMEG_0194BAMEG_0194BAMEG_0194BAMEG_0194BAMEG_0194
BANT261594 GBAA0163GBAA0163GBAA0163GBAA0163GBAA0163GBAA0163GBAA0163
BANT260799 BAS0165BAS0165BAS0165BAS0165BAS0165BAS0165BAS0165
BAMY326423 RBAM_031440RBAM_031440RBAM_031440RBAM_031440RBAM_031440RBAM_031440RBAM_031440
BAMB398577 BAMMC406_0583BAMMC406_0583BAMMC406_0583BAMMC406_0583BAMMC406_0583BAMMC406_0583BAMMC406_0583
BAMB339670 BAMB_0557BAMB_0557BAMB_0557BAMB_0557BAMB_0557BAMB_0557BAMB_0557
ASP62977 ACIAD0544ACIAD0544ACIAD0544ACIAD0544ACIAD0544ACIAD0544ACIAD0544
ASP1667 ARTH_0274ARTH_0274ARTH_3529ARTH_3529ARTH_3529ARTH_3529ARTH_0274
ASAL382245 ASA_4111ASA_4111ASA_4111ASA_4111ASA_4111ASA_4111ASA_2939
APLE434271 APJL_1696APJL_1696APJL_1696APJL_1696APJL_1696APJL_1696APJL_1696
APLE416269 APL_1665APL_1665APL_1665APL_1665APL_1665APL_1665APL_1665
AORE350688 CLOS_2543CLOS_2543CLOS_2543CLOS_2543CLOS_2543CLOS_2543CLOS_2543
AHYD196024 AHA_0286AHA_0286AHA_0286AHA_0286AHA_0286AHA_0286AHA_0286
AAUR290340 AAUR_0256AAUR_4059AAUR_2720AAUR_2720AAUR_2720AAUR_2720AAUR_2720


Organism features enriched in list (features available for 188 out of the 198 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 1.034e-71617
Arrangment:Pairs 5.212e-1166112
Disease:Bubonic_plague 0.001064566
Disease:Dysentery 0.001064566
Disease:Gastroenteritis 0.00096281013
Disease:Opportunistic_infections 0.003362255
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 3.200e-61111
Endospores:Yes 9.660e-83553
GC_Content_Range4:0-40 0.000618652213
GC_Content_Range4:40-60 0.000408290224
GC_Content_Range7:30-40 0.009157843166
GC_Content_Range7:50-60 0.000449549107
Genome_Size_Range5:0-2 3.829e-245155
Genome_Size_Range5:4-6 3.905e-1296184
Genome_Size_Range5:6-10 0.00001072947
Genome_Size_Range9:1-2 2.705e-185128
Genome_Size_Range9:4-5 0.00019534696
Genome_Size_Range9:5-6 1.434e-75088
Genome_Size_Range9:6-8 0.00014382338
Gram_Stain:Gram_Pos 1.853e-774150
Habitat:Aquatic 0.00001591391
Habitat:Multiple 0.000016879178
Habitat:Specialized 0.0018565853
Habitat:Terrestrial 0.00011872031
Motility:Yes 0.0001380106267
Optimal_temp.:20-30 0.005101267
Optimal_temp.:30-37 0.00006631418
Oxygen_Req:Anaerobic 0.001738221102
Oxygen_Req:Facultative 1.659e-11101201
Pathogenic_in:Human 1.710e-694213
Pathogenic_in:No 1.989e-648226
Shape:Rod 4.363e-12149347
Shape:Spiral 0.0000195134
Temp._range:Hyperthermophilic 0.0012102123
Temp._range:Mesophilic 1.725e-7174473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 413
Effective number of orgs (counting one per cluster within 468 clusters): 338

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VFIS312309 ncbi Vibrio fischeri ES1140
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PRUM264731 ncbi Prevotella ruminicola 230
PPRO298386 ncbi Photobacterium profundum SS91
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NHAM323097 ncbi Nitrobacter hamburgensis X140
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP266779 ncbi Chelativorans sp. BNC10
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FMAG334413 ncbi Finegoldia magna ATCC 293280
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7421   EG12631   EG12563   EG12548   EG12539   EG12380   EG10250   
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121
WPIP955
WPIP80849
VFIS312309
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TTEN273068
TSP28240
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275 TDE_0207
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMEL266834
SMED366394
SMAR399550
SLAC55218
SGOR29390
SFUM335543
SELO269084
SDEN318161
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMAS416276
RLEG216596
RFER338969
RFEL315456
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP312153
PSP296591
PRUM264731
PPRO298386 PBPRB1409
PNAP365044
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PING357804
PHOR70601
PGIN242619
PFUR186497
PCAR338963
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NHAM323097
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSP266779
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108
MLOT266835
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
LXYL281090
LWEL386043
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMON265669
LMON169963
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
JSP290400
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMAR272569
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HCHE349521
HBUT415426
HAUR316274
HARS204773
HACI382638
GVIO251221
GURA351605
GSUL243231
GMET269799
GKAU235909
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FMAG334413
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087
CVIO243365
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78
CSP501479
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105 CCV52592_0611
CCON360104 CCC13826_2190
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT441771
CBLO291272
CBLO203907
CBEI290402
CAULO
CABO218497
BTUR314724
BTRI382640
BTHE226186
BSUI470137
BSUI204722
BSP376
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BLON206672
BJAP224911
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62928
ASP232721
APHA212042
APER272557
ANAE240017
AMET293826 AMET_0501
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669
AAVE397945
AAEO224324


Organism features enriched in list (features available for 385 out of the 413 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 2.388e-7117
Arrangment:Pairs 3.666e-1242112
Disease:Gastroenteritis 0.0015154313
Disease:Wide_range_of_infections 0.00991561111
Endospores:Yes 4.434e-71853
GC_Content_Range4:0-40 0.0000696161213
GC_Content_Range4:40-60 0.0000654127224
GC_Content_Range7:0-30 0.00983623847
GC_Content_Range7:30-40 0.0025730123166
GC_Content_Range7:50-60 0.000442656107
Genome_Size_Range5:0-2 3.904e-26150155
Genome_Size_Range5:4-6 9.339e-1580184
Genome_Size_Range5:6-10 9.350e-61747
Genome_Size_Range9:0-1 9.876e-62727
Genome_Size_Range9:1-2 7.995e-20123128
Genome_Size_Range9:4-5 0.00016504896
Genome_Size_Range9:5-6 4.458e-103288
Genome_Size_Range9:6-8 0.00010161438
Gram_Stain:Gram_Pos 4.177e-774150
Habitat:Aquatic 0.00003517691
Habitat:Host-associated 0.0097486147206
Habitat:Multiple 1.868e-693178
Habitat:Specialized 0.00083244553
Habitat:Terrestrial 0.00026561131
Motility:Yes 0.0000332154267
Optimal_temp.:20-30 0.006813417
Optimal_temp.:30-37 0.0001267418
Oxygen_Req:Anaerobic 0.000536481102
Oxygen_Req:Facultative 4.020e-1295201
Pathogenic_in:Human 8.069e-6117213
Pathogenic_in:No 6.682e-6173226
Shape:Irregular_coccus 0.00076401717
Shape:Rod 3.697e-14188347
Shape:Sphere 0.00032271919
Shape:Spiral 8.485e-63334
Temp._range:Hyperthermophilic 0.00071372223
Temp._range:Mesophilic 1.137e-6292473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 19
Effective number of orgs (counting one per cluster within 468 clusters): 19

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 8293 0.00122497617
PPEN278197 ncbi Pediococcus pentosaceus ATCC 25745 0.00151007847
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 13129 0.00169507977
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00175578017
LBRE387344 ncbi Lactobacillus brevis ATCC 367 0.00186648087
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 25586 0.00207018207
LSAK314315 ncbi Lactobacillus sakei sakei 23K 0.00253528447
CMIC31964 ncbi Clavibacter michiganensis sepedonicus 0.00291648617
RSAL288705 ncbi Renibacterium salmoninarum ATCC 33209 0.00296438637
PACN267747 ncbi Propionibacterium acnes KPA171202 0.00306228677
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 382 0.00430229107
CEFF196164 ncbi Corynebacterium efficiens YS-314 0.00450549167
CGLU196627 ncbi Corynebacterium glutamicum ATCC 13032 0.00548409427
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.00586279517
PDIS435591 ncbi Parabacteroides distasonis ATCC 8503 0.008700510067
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM4 0.009071410127
MABS561007 ncbi Mycobacterium abscessus ATCC 19977 0.009390810177
LPLA220668 ncbi Lactobacillus plantarum WCFS1 0.009854110247
SEPI176280 ncbi Staphylococcus epidermidis ATCC 12228 0.009990010267


Names of the homologs of the genes in the group in each of these orgs
  G7421   EG12631   EG12563   EG12548   EG12539   EG12380   EG10250   
LMES203120 LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923LEUM_0923
PPEN278197 PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360PEPE_1360
CDIP257309 DIP2078DIP0253DIP0253DIP0253DIP0253DIP0253DIP0253
PMOB403833 PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535PMOB_0535
LBRE387344 LVIS_1586LVIS_1576LVIS_1586LVIS_1586LVIS_1586LVIS_1586LVIS_1586
FNUC190304 FN0225FN0225FN0225FN0225FN0225FN0225FN0225
LSAK314315 LSA0299LSA0299LSA0299LSA0299LSA0299LSA0299LSA0299
CMIC31964 CMS3035CMS3035CMS3035CMS3035CMS3035CMS3035CMS3035
RSAL288705 RSAL33209_0835RSAL33209_2176RSAL33209_2014RSAL33209_2014RSAL33209_2014RSAL33209_2014RSAL33209_2014
PACN267747 PPA0738PPA0738PPA0738PPA0738PPA0738PPA0738PPA0738
CMIC443906 CMM_2908CMM_2908CMM_2908CMM_2908CMM_2908CMM_2908CMM_2908
CEFF196164 CE0611CE0611CE0611CE0611CE0611CE0611CE0611
CGLU196627 CG3216CG3216CG3216CG3216CG3216CG3216CG3216
LCAS321967 LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229LSEI_0229
PDIS435591 BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331BDI_1331
ZMOB264203 ZMO1756ZMO1756ZMO1756ZMO1756ZMO1756ZMO1756ZMO1756
MABS561007 MAB_3634CMAB_3634CMAB_3634CMAB_3634CMAB_3634CMAB_3634CMAB_3634C
LPLA220668 LP_1249LP_1249LP_1249LP_1249LP_1249LP_1249LP_1249
SEPI176280 SE_2044SE_2044SE_2044SE_2044SE_2044SE_2044SE_2044


Organism features enriched in list (features available for 19 out of the 19 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:V-shaped_pairs 0.001007922
Endospores:No 0.002965213211
Genome_Size_Range5:2-4 0.000048815197
Genome_Size_Range9:2-3 0.00548389120
Gram_Stain:Gram_Neg 0.00019273333
Gram_Stain:Gram_Pos 8.535e-816150
Habitat:Multiple 0.002256012178
Motility:No 0.000080913151
Motility:Yes 0.00011651267
Optimal_temp.:- 0.00693603257
Optimal_temp.:25-28 0.001007922
Optimal_temp.:30-40 0.002935323



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
IDNCAT-PWY (L-idonate degradation)2461580.5629
RIBOKIN-PWY (ribose degradation)2791560.4667
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121900.4492
GLUTAMINDEG-PWY (glutamine degradation I)1911200.4433
PWY0-1314 (fructose degradation)2241320.4368
GLUTDEG-PWY (glutamate degradation II)1941200.4343
PWY-6196 (serine racemization)102780.4247
KETOGLUCONMET-PWY (ketogluconate metabolism)103780.4200
PWY-5837 (1,4-dihydroxy-2-naphthoate biosynthesis I)2281300.4118
MANNIDEG-PWY (mannitol degradation I)99750.4105
GALACTITOLCAT-PWY (galactitol degradation)73610.4051
SERDEG-PWY (L-serine degradation)3491690.4034



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12631   EG12563   EG12548   EG12539   EG12380   EG10250   
G74210.9998480.9998020.9998150.9998130.9998160.999801
EG126310.9998310.9998550.9998570.9998580.999812
EG125630.9998720.9998680.999880.999817
EG125480.9999030.9998970.999851
EG125390.9998980.999844
EG123800.999854
EG10250



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PAIRWISE BLAST SCORES:

  G7421   EG12631   EG12563   EG12548   EG12539   EG12380   EG10250   
G74210.0f0-3.0e-428.9e-501.0e-482.0e-52-
EG126319.6e-340.0f03.1e-261.5e-333.9e-403.3e-361.6e-34
EG125633.1e-47-0.0f05.9e-692.7e-801.6e-822.4e-56
EG125481.4e-355.9e-301.2e-470.0f03.8e-742.7e-733.7e-44
EG125397.5e-463.1e-476.7e-771.6e-910.0f03.3e-1232.7e-57
EG123801.2e-471.4e-422.3e-742.8e-853.5e-1190.0f03.1e-56
EG102503.2e-388.8e-431.7e-531.0e-575.6e-574.9e-580.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7421 (centered at G7421)
EG12631 (centered at EG12631)
EG12563 (centered at EG12563)
EG12548 (centered at EG12548)
EG12539 (centered at EG12539)
EG12380 (centered at EG12380)
EG10250 (centered at EG10250)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7421   EG12631   EG12563   EG12548   EG12539   EG12380   EG10250   
209/623199/623204/623203/623199/623201/623200/623
AAUR290340:2:Tyes0372524032403240324032403
AHYD196024:0:Tyes0000000
AMET293826:0:Tyes------0
AORE350688:0:Tyes0000000
APLE416269:0:Tyes0000000
APLE434271:0:Tno0000000
ASAL382245:5:Tyes1140114011401140114011400
ASP1667:3:Tyes0032853285328532850
ASP62977:0:Tyes0000000
BAMB339670:3:Tno0000000
BAMB398577:3:Tno0000000
BAMY326423:0:Tyes0000000
BANT260799:0:Tno0000000
BANT261594:2:Tno0000000
BANT568206:2:Tyes0000000
BANT592021:2:Tno0000000
BCEN331271:2:Tno0000000
BCEN331272:3:Tyes0000000
BCER226900:1:Tyes0000000
BCER288681:0:Tno0000000
BCER315749:1:Tyes0000000
BCER405917:1:Tyes0000000
BCER572264:1:Tno0000003140
BCLA66692:0:Tyes0000000
BHAL272558:0:Tyes0000000
BLIC279010:0:Tyes0000000
BMAL243160:1:Tno0000000
BMAL320388:1:Tno0000000
BMAL320389:1:Tyes0000000
BPSE272560:1:Tyes0000000
BPSE320372:1:Tno0000000
BPSE320373:1:Tno0000000
BPUM315750:0:Tyes4040000040
BSP36773:2:Tyes0000000
BSUB:0:Tyes0214102141214121412141
BTHA271848:1:Tno0000000
BTHU281309:1:Tno0000000
BTHU412694:1:Tno0000002784
BVIE269482:7:Tyes0000000
BWEI315730:4:Tyes0000000
BXEN266265:1:Tyes0000000
CACE272562:1:Tyes0000000
CBOT36826:1:Tno0000000
CBOT441770:0:Tyes0000000
CBOT441772:1:Tno0000000
CBOT498213:1:Tno0000000
CBOT508765:1:Tyes0000000
CBOT515621:2:Tyes0000000
CBOT536232:0:Tno0000000
CCON360104:2:Tyes0------
CCUR360105:0:Tyes0------
CDIF272563:1:Tyes0000000
CDIP257309:0:Tyes1811000000
CEFF196164:0:Fyes0000000
CGLU196627:0:Tyes0000000
CHUT269798:0:Tyes-000000
CJAP155077:0:Tyes0000000
CMIC31964:2:Tyes0000000
CMIC443906:2:Tyes0000000
CNOV386415:0:Tyes0000000
CPHY357809:0:Tyes0000000
CSAL290398:0:Tyes0000000
ECAR218491:0:Tyes2542000000
ECOL199310:0:Tno398130624672432243212740
ECOL316407:0:Tno359145719241897186914760
ECOL331111:6:Tno08491806826826826826
ECOL362663:0:Tno0809779177617767791851
ECOL364106:1:Tno0831803175017508031834
ECOL405955:2:Tyes400114611172069206911170
ECOL409438:6:Tyes07301654708708708708
ECOL413997:0:Tno328103419501897189710150
ECOL439855:4:Tno1147114722262133213311250
ECOL469008:0:Tno68303399203451201020
ECOL481805:0:Tno7040212121211049
ECOL585034:0:Tno07331649711711711711
ECOL585035:0:Tno437123722832253121012100
ECOL585055:0:Tno0823192217671767801801
ECOL585056:2:Tno2525102899590800
ECOL585057:0:Tno22228878358350312
ECOL585397:0:Tno382127412411241124112410
ECOL83334:0:Tno282810590000
ECOLI:0:Tno381108019841956192610610
ECOO157:0:Tno292910220000
EFER585054:1:Tyes28280000568
ESP42895:1:Tyes161600000
FJOH376686:0:Tyes0000000
FNOD381764:0:Tyes0-00000
FNUC190304:0:Tyes0000000
GOXY290633:5:Tyes0000000
GTHE420246:1:Tyes0000000
HINF71421:0:Tno0000000
HMOD498761:0:Tyes0000000
HSOM205914:1:Tyes0001334133413341334
HSOM228400:0:Tno0000001198
KPNE272620:2:Tyes0244524282428242824282735
KRAD266940:2:Fyes0000000
LBRE387344:2:Tyes9099999
LCAS321967:1:Tyes0000000
LMES203120:1:Tyes0000000
LPLA220668:0:Tyes0000000
LREU557436:0:Tyes0-00000
LSAK314315:0:Tyes0000000
LSPH444177:1:Tyes0000000
MABS561007:1:Tyes0000000
MGIL350054:3:Tyes000000-
MMAR394221:0:Tyes000000-
MSME246196:0:Tyes3314331403314331433143314
MSP164756:1:Tno0000--0
MSP164757:0:Tno0000-00
MSP189918:2:Tyes0000--0
MSP400668:0:Tyes00-0-0-
MSUC221988:0:Tyes170017000370170017001700
MTHE264732:0:Tyes000000166
MVAN350058:0:Tyes00000-0
NGON242231:0:Tyes000000-
NMEN122586:0:Tno000000-
NMEN122587:0:Tyes000000-
NMEN272831:0:Tno000000-
NMEN374833:0:Tno000000-
OANT439375:4:Tyes0000000
OIHE221109:0:Tyes00976976976976976
PACN267747:0:Tyes0000000
PAER208963:0:Tyes0000000
PAER208964:0:Tno0000000
PATL342610:0:Tyes000000-
PCRY335284:1:Tyes0-0---0
PDIS435591:0:Tyes0000000
PENT384676:0:Tyes0000000
PFLU205922:0:Tyes0000000
PFLU216595:1:Tyes0236323632363236323632363
PFLU220664:0:Tyes0121312131213121312131213
PHAL326442:0:Tyes0000000
PLUM243265:0:Fyes0015171517015171517
PMEN399739:0:Tyes0----00
PMOB403833:0:Tyes0000000
PMUL272843:1:Tyes000000566
PPEN278197:0:Tyes0000000
PPRO298386:1:Tyes------0
PPUT160488:0:Tno0000000
PPUT351746:0:Tyes000000713
PPUT76869:0:Tno000000581
PSP117:0:Tyes--0-00-
PSP56811:2:Tyes0--0--0
PSYR205918:0:Tyes0000000
PSYR223283:2:Tyes0000000
REUT264198:2:Tyes0000000
REUT381666:1:Tyes-000000
REUT381666:2:Tyes0------
RMET266264:1:Tyes0000000
RRUB269796:1:Tyes0000000
RSAL288705:0:Tyes0134111791179117911791179
RSOL267608:0:Tyes0000000
RSP101510:3:Fyes10210200000
SAUR158878:1:Tno0000000
SAUR158879:1:Tno0000000
SAUR196620:0:Tno0000000
SAUR273036:0:Tno0000000
SAUR282458:0:Tno0000000
SAUR282459:0:Tno0000000
SAUR359786:1:Tno0000000
SAUR359787:1:Tno0000000
SAUR367830:3:Tno0000000
SAUR418127:0:Tyes0000000
SAUR426430:0:Tno0000000
SAUR93061:0:Fno0000000
SAUR93062:1:Tno0000000
SAVE227882:1:Fyes0341034103410341034103410
SBAL399599:3:Tyes0000000
SBAL402882:1:Tno0000000
SBOY300268:1:Tyes0626597597597597597
SCO:2:Fyes0000000
SDEG203122:0:Tyes0000000
SDYS300267:1:Tyes006666666666
SENT209261:0:Tno2422422562562562560
SENT220341:0:Tno2442442582582582580
SENT295319:0:Tno151508648640259
SENT321314:2:Tno272709169160281
SENT454169:2:Tno30300101710170307
SEPI176279:1:Tyes0000000
SEPI176280:0:Tno0000000
SERY405948:0:Tyes1914191401914191419141914
SFLE198214:0:Tyes19197500000
SFLE373384:0:Tno007400000
SGLO343509:3:Tyes0000000
SHAE279808:0:Tyes0000000
SHAL458817:0:Tyes0000000
SHIGELLA:0:Tno19014219191919
SLOI323850:0:Tyes0-----0
SONE211586:1:Tyes0-----0
SPEA398579:0:Tno0000000
SPRO399741:1:Tyes030393196319631963196969
SSAP342451:2:Tyes0000000
SSED425104:0:Tyes0-----0
SSON300269:1:Tyes074662314681468623623
SSP94122:1:Tyes0-----0
STHE292459:0:Tyes0000000
STYP99287:1:Tyes272709609600289
TDEN243275:0:Tyes--0----
TLET416591:0:Tyes0-00000
TSP1755:0:Tyes-000000
VCHO:0:Tyes000000-
VCHO:1:Fyes------0
VCHO345073:0:Tno------0
VCHO345073:1:Tno000000-
VPAR223926:0:Tyes------0
VPAR223926:1:Tyes000000-
VVUL196600:2:Tyes000000-
VVUL216895:1:Tno000000-
XAUT78245:1:Tyes0000000
YENT393305:1:Tyes2909290902909290929092909
YPES187410:5:Tno4534530453453453453
YPES214092:3:Tno3086308603086308630863086
YPES349746:2:Tno0000000
YPES360102:3:Tyes4124120412412412412
YPES377628:2:Tno4034030403403403403
YPES386656:2:Tno0000000
YPSE273123:2:Tno5095090509509509509
YPSE349747:2:Tno3290329003290329032903290
ZMOB264203:0:Tyes0000000



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