Org ID | Org Name | # genes in group found in org |
YPSE349747 ncbi | Yersinia pseudotuberculosis IP 31758 | 6 |
YPSE273123 ncbi | Yersinia pseudotuberculosis IP 32953 | 6 |
YPES386656 ncbi | Yersinia pestis Pestoides F | 6 |
YPES377628 ncbi | Yersinia pestis Nepal516 | 6 |
YPES360102 ncbi | Yersinia pestis Antiqua | 6 |
YPES349746 ncbi | Yersinia pestis Angola | 5 |
YPES214092 ncbi | Yersinia pestis CO92 | 5 |
YPES187410 ncbi | Yersinia pestis KIM 10 | 6 |
YENT393305 ncbi | Yersinia enterocolitica enterocolitica 8081 | 6 |
VPAR223926 ncbi | Vibrio parahaemolyticus RIMD 2210633 | 5 |
VEIS391735 ncbi | Verminephrobacter eiseniae EF01-2 | 6 |
TPSE340099 ncbi | Thermoanaerobacter pseudethanolicus ATCC 33223 | 5 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 6 |
SSP321332 ncbi | Synechococcus sp. JA-2-3Ba(2-13) | 5 |
SSP321327 ncbi | Synechococcus sp. JA-3-3Ab | 6 |
SSON300269 ncbi | Shigella sonnei Ss046 | 6 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 6 |
SMEL266834 ncbi | Sinorhizobium meliloti 1021 | 5 |
SMED366394 ncbi | Sinorhizobium medicae WSM419 | 5 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 6 |
SFUM335543 ncbi | Syntrophobacter fumaroxidans MPOB | 5 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 6 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 6 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 6 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 6 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 6 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 6 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 6 |
SBOY300268 ncbi | Shigella boydii Sb227 | 6 |
SAVE227882 ncbi | Streptomyces avermitilis MA-4680 | 5 |
RSP357808 ncbi | Roseiflexus sp. RS-1 | 5 |
RSP101510 ncbi | Rhodococcus jostii RHA1 | 5 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 6 |
RRUB269796 ncbi | Rhodospirillum rubrum ATCC 11170 | 6 |
RPOM246200 ncbi | Ruegeria pomeroyi DSS-3 | 6 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 5 |
RPAL258594 ncbi | Rhodopseudomonas palustris CGA009 | 5 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 6 |
RLEG216596 ncbi | Rhizobium leguminosarum bv. viciae 3841 | 5 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 5 |
REUT381666 ncbi | Ralstonia eutropha H16 | 6 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 5 |
RETL347834 ncbi | Rhizobium etli CFN 42 | 5 |
RCAS383372 ncbi | Roseiflexus castenholzii DSM 13941 | 5 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 6 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 6 |
PSP56811 | Psychrobacter sp. | 6 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 6 |
PSP296591 ncbi | Polaromonas sp. JS666 | 6 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 6 |
PPUT351746 ncbi | Pseudomonas putida F1 | 6 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 6 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 5 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 6 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 5 |
PLUM243265 ncbi | Photorhabdus luminescens laumondii TTO1 | 6 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 6 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 6 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 6 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 6 |
PCRY335284 ncbi | Psychrobacter cryohalolentis K5 | 5 |
PARC259536 ncbi | Psychrobacter arcticus 273-4 | 6 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 6 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 6 |
OCAR504832 ncbi | Oligotropha carboxidovorans OM5 | 5 |
OANT439375 ncbi | Ochrobactrum anthropi ATCC 49188 | 5 |
NSP103690 ncbi | Nostoc sp. PCC 7120 | 6 |
MSP409 | Methylobacterium sp. | 6 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 5 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 6 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 6 |
MGIL350054 ncbi | Mycobacterium gilvum PYR-GCK | 5 |
MEXT419610 ncbi | Methylobacterium extorquens PA1 | 5 |
LREU557436 ncbi | Lactobacillus reuteri DSM 20016 | 6 |
LJOH257314 ncbi | Lactobacillus johnsonii NCC 533 | 5 |
LGAS324831 ncbi | Lactobacillus gasseri ATCC 33323 | 5 |
LCHO395495 ncbi | Leptothrix cholodnii SP-6 | 6 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 6 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 5 |
JSP290400 ncbi | Jannaschia sp. CCS1 | 5 |
HMOD498761 ncbi | Heliobacterium modesticaldum Ice1 | 6 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 5 |
GKAU235909 ncbi | Geobacillus kaustophilus HTA426 | 6 |
ESP42895 | Enterobacter sp. | 6 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 6 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 6 |
ECOL83334 | Escherichia coli O157:H7 | 6 |
ECOL585397 ncbi | Escherichia coli ED1a | 6 |
ECOL585057 ncbi | Escherichia coli IAI39 | 6 |
ECOL585056 ncbi | Escherichia coli UMN026 | 6 |
ECOL585055 ncbi | Escherichia coli 55989 | 6 |
ECOL585035 ncbi | Escherichia coli S88 | 6 |
ECOL585034 ncbi | Escherichia coli IAI1 | 6 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 6 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 6 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 6 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 6 |
ECOL409438 ncbi | Escherichia coli SE11 | 6 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 6 |
ECOL364106 ncbi | Escherichia coli UTI89 | 6 |
ECOL362663 ncbi | Escherichia coli 536 | 6 |
ECOL331111 ncbi | Escherichia coli E24377A | 6 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 6 |
ECOL199310 ncbi | Escherichia coli CFT073 | 6 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 6 |
DVUL882 ncbi | Desulfovibrio vulgaris Hildenborough | 6 |
DRAD243230 ncbi | Deinococcus radiodurans R1 | 5 |
DPSY177439 ncbi | Desulfotalea psychrophila LSv54 | 6 |
DHAF138119 ncbi | Desulfitobacterium hafniense Y51 | 5 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 6 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 6 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 5 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 5 |
CBOT515621 ncbi | Clostridium botulinum Ba4 str. 657 | 5 |
CBOT498213 ncbi | Clostridium botulinum B1 str. Okra | 5 |
CBEI290402 ncbi | Clostridium beijerinckii NCIMB 8052 | 6 |
BWEI315730 ncbi | Bacillus weihenstephanensis KBAB4 | 6 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 6 |
BTRI382640 ncbi | Bartonella tribocorum CIP 105476 | 5 |
BTHU412694 ncbi | Bacillus thuringiensis Al Hakam | 6 |
BTHU281309 ncbi | Bacillus thuringiensis serovar konkukian str. 97-27 | 6 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 6 |
BSUB ncbi | Bacillus subtilis subtilis 168 | 6 |
BSP376 | Bradyrhizobium sp. | 6 |
BSP36773 | Burkholderia sp. | 6 |
BQUI283165 ncbi | Bartonella quintana Toulouse | 5 |
BPUM315750 ncbi | Bacillus pumilus SAFR-032 | 6 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 6 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 6 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 6 |
BPET94624 | Bordetella petrii | 6 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 6 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 6 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 6 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 6 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 5 |
BJAP224911 ncbi | Bradyrhizobium japonicum USDA 110 | 6 |
BHEN283166 ncbi | Bartonella henselae Houston-1 | 5 |
BCLA66692 ncbi | Bacillus clausii KSM-K16 | 5 |
BCER572264 ncbi | Bacillus cereus 03BB102 | 6 |
BCER405917 | Bacillus cereus W | 6 |
BCER315749 ncbi | Bacillus cytotoxicus NVH 391-98 | 6 |
BCER288681 ncbi | Bacillus cereus E33L | 6 |
BCER226900 ncbi | Bacillus cereus ATCC 14579 | 5 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 6 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 6 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 6 |
BBAC360095 ncbi | Bartonella bacilliformis KC583 | 5 |
BANT592021 ncbi | Bacillus anthracis A0248 | 5 |
BANT568206 ncbi | Bacillus anthracis CDC 684 | 5 |
BANT261594 ncbi | Bacillus anthracis Ames Ancestor | 5 |
BANT260799 ncbi | Bacillus anthracis Sterne | 5 |
BAMY326423 ncbi | Bacillus amyloliquefaciens FZB42 | 6 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 6 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 6 |
AVAR240292 ncbi | Anabaena variabilis ATCC 29413 | 6 |
ASP76114 ncbi | Aromatoleum aromaticum EbN1 | 5 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 6 |
ASP62928 ncbi | Azoarcus sp. BH72 | 6 |
ASP232721 ncbi | Acidovorax sp. JS42 | 5 |
ASP1667 | Arthrobacter sp. | 5 |
AMAR329726 ncbi | Acaryochloris marina MBIC11017 | 5 |
ACAU438753 ncbi | Azorhizobium caulinodans ORS 571 | 6 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 6 |
AAUR290340 ncbi | Arthrobacter aurescens TC1 | 5 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Disease:Anthrax | 0.0049828 | 4 | 4 |
Disease:Bubonic_plague | 0.0003417 | 6 | 6 |
Disease:Dysentery | 0.0057981 | 5 | 6 |
Disease:Gastroenteritis | 0.0066391 | 8 | 13 |
Endospores:No | 6.218e-8 | 30 | 211 |
Endospores:Yes | 0.0059707 | 22 | 53 |
GC_Content_Range4:0-40 | 7.579e-13 | 22 | 213 |
GC_Content_Range4:60-100 | 7.069e-8 | 64 | 145 |
GC_Content_Range7:0-30 | 0.0002313 | 3 | 47 |
GC_Content_Range7:30-40 | 1.889e-8 | 19 | 166 |
GC_Content_Range7:50-60 | 0.0003145 | 43 | 107 |
GC_Content_Range7:60-70 | 3.771e-9 | 63 | 134 |
Genome_Size_Range5:0-2 | 4.091e-17 | 6 | 155 |
Genome_Size_Range5:2-4 | 6.887e-12 | 20 | 197 |
Genome_Size_Range5:4-6 | 8.826e-22 | 98 | 184 |
Genome_Size_Range5:6-10 | 5.768e-10 | 32 | 47 |
Genome_Size_Range9:1-2 | 9.278e-13 | 6 | 128 |
Genome_Size_Range9:2-3 | 1.148e-10 | 7 | 120 |
Genome_Size_Range9:4-5 | 1.781e-6 | 45 | 96 |
Genome_Size_Range9:5-6 | 3.722e-13 | 53 | 88 |
Genome_Size_Range9:6-8 | 3.760e-9 | 27 | 38 |
Gram_Stain:Gram_Neg | 0.0000120 | 111 | 333 |
Gram_Stain:Gram_Pos | 0.0026908 | 28 | 150 |
Habitat:Aquatic | 0.0050838 | 15 | 91 |
Habitat:Host-associated | 0.0002460 | 38 | 206 |
Habitat:Multiple | 9.082e-6 | 69 | 178 |
Habitat:Terrestrial | 0.0001203 | 18 | 31 |
Motility:No | 2.928e-7 | 18 | 151 |
Motility:Yes | 4.255e-8 | 100 | 267 |
Optimal_temp.:- | 0.0053481 | 81 | 257 |
Optimal_temp.:25-30 | 0.0097041 | 10 | 19 |
Oxygen_Req:Anaerobic | 3.276e-6 | 10 | 102 |
Oxygen_Req:Facultative | 0.0001461 | 72 | 201 |
Shape:Coccus | 5.334e-8 | 4 | 82 |
Shape:Rod | 4.240e-18 | 136 | 347 |
Shape:Spiral | 0.0002349 | 1 | 34 |
Temp._range:Mesophilic | 0.0019278 | 138 | 473 |
Org ID | Org Name | # genes in group found in org |
ZMOB264203 ncbi | Zymomonas mobilis mobilis ZM4 | 0 |
XORY360094 ncbi | Xanthomonas oryzae pv. oryzae PXO99A | 0 |
XORY342109 ncbi | Xanthomonas oryzae pv. oryzae MAFF 311018 | 0 |
XORY291331 ncbi | Xanthomonas oryzae pv. oryzae KACC10331 | 0 |
XFAS405440 ncbi | Xylella fastidiosa M12 | 0 |
XFAS183190 ncbi | Xylella fastidiosa Temecula1 | 0 |
XFAS160492 ncbi | Xylella fastidiosa 9a5c | 0 |
XCAM487884 | Xanthomonas campestris pv. paulliniae | 0 |
XCAM316273 ncbi | Xanthomonas campestris pv. vesicatoria str. 85-10 | 0 |
XCAM314565 ncbi | Xanthomonas campestris pv. campestris str. 8004 | 0 |
XCAM190485 ncbi | Xanthomonas campestris pv. campestris str. ATCC 33913 | 0 |
XAXO190486 ncbi | Xanthomonas axonopodis pv. citri str. 306 | 0 |
WPIP955 | Wolbachia pipientis | 0 |
WPIP80849 | Wolbachia endosymbiont of Brugia malayi | 0 |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 0 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 0 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 0 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 0 |
TROS309801 ncbi | Thermomicrobium roseum DSM 5159 | 0 |
TPEN368408 ncbi | Thermofilum pendens Hrk 5 | 1 |
TPAL243276 ncbi | Treponema pallidum pallidum Nichols | 0 |
TKOD69014 ncbi | Thermococcus kodakarensis KOD1 | 0 |
TELO197221 ncbi | Thermosynechococcus elongatus BP-1 | 0 |
TDEN326298 ncbi | Sulfurimonas denitrificans DSM 1251 | 0 |
TDEN292415 ncbi | Thiobacillus denitrificans ATCC 25259 | 0 |
TDEN243275 ncbi | Treponema denticola ATCC 35405 | 0 |
TCRU317025 ncbi | Thiomicrospira crunogena XCL-2 | 0 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
SSUI391296 ncbi | Streptococcus suis 98HAH33 | 1 |
SSUI391295 ncbi | Streptococcus suis 05ZYH33 | 0 |
SSP94122 ncbi | Shewanella sp. ANA-3 | 0 |
SSP64471 ncbi | Synechococcus sp. CC9311 | 1 |
SSP387093 ncbi | Sulfurovum sp. NBC37-1 | 0 |
SSOL273057 ncbi | Sulfolobus solfataricus P2 | 0 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 0 |
SSAP342451 ncbi | Staphylococcus saprophyticus saprophyticus ATCC 15305 | 1 |
SRUB309807 ncbi | Salinibacter ruber DSM 13855 | 0 |
SPYO286636 ncbi | Streptococcus pyogenes MGAS10394 | 1 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 0 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 0 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 1 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 0 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 0 |
SHAE279808 ncbi | Staphylococcus haemolyticus JCSC1435 | 0 |
SGOR29390 | Streptococcus gordonii Challis | 0 |
SEPI176280 ncbi | Staphylococcus epidermidis ATCC 12228 | 0 |
SEPI176279 ncbi | Staphylococcus epidermidis RP62A | 0 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 0 |
SDEG203122 ncbi | Saccharophagus degradans 2-40 | 0 |
SBAL402882 ncbi | Shewanella baltica OS185 | 0 |
SBAL399599 ncbi | Shewanella baltica OS195 | 0 |
SAUR93062 ncbi | Staphylococcus aureus aureus COL | 0 |
SAUR93061 ncbi | Staphylococcus aureus aureus NCTC 8325 | 0 |
SAUR426430 ncbi | Staphylococcus aureus aureus Newman | 0 |
SAUR418127 ncbi | Staphylococcus aureus aureus Mu3 | 0 |
SAUR367830 | Staphylococcus aureus aureus USA300 | 0 |
SAUR359787 ncbi | Staphylococcus aureus aureus JH1 | 0 |
SAUR359786 ncbi | Staphylococcus aureus aureus JH9 | 0 |
SAUR282459 ncbi | Staphylococcus aureus aureus MSSA476 | 0 |
SAUR282458 ncbi | Staphylococcus aureus aureus MRSA252 | 0 |
SAUR273036 ncbi | Staphylococcus aureus RF122 | 0 |
SAUR196620 ncbi | Staphylococcus aureus aureus MW2 | 0 |
SAUR158879 ncbi | Staphylococcus aureus aureus N315 | 0 |
SAUR158878 ncbi | Staphylococcus aureus aureus Mu50 | 0 |
SAGA208435 ncbi | Streptococcus agalactiae 2603V/R | 1 |
SAGA205921 ncbi | Streptococcus agalactiae A909 | 1 |
SACI56780 ncbi | Syntrophus aciditrophicus SB | 0 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RTYP257363 ncbi | Rickettsia typhi Wilmington | 0 |
RRIC452659 ncbi | Rickettsia rickettsii Iowa | 0 |
RRIC392021 ncbi | Rickettsia rickettsii Sheila Smith | 0 |
RPRO272947 ncbi | Rickettsia prowazekii Madrid E | 0 |
RMAS416276 ncbi | Rickettsia massiliae MTU5 | 0 |
RFEL315456 ncbi | Rickettsia felis URRWXCal2 | 0 |
RCON272944 ncbi | Rickettsia conorii Malish 7 | 0 |
RCAN293613 ncbi | Rickettsia canadensis McKiel | 0 |
RBEL391896 ncbi | Rickettsia bellii OSU 85-389 | 0 |
RBEL336407 ncbi | Rickettsia bellii RML369-C | 0 |
RALB246199 | Ruminococcus albus 8 | 0 |
RAKA293614 ncbi | Rickettsia akari Hartford | 0 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 0 |
PTHE370438 ncbi | Pelotomaculum thermopropionicum SI | 0 |
PSP117 | Pirellula sp. | 0 |
PRUM264731 ncbi | Prevotella ruminicola 23 | 0 |
PMUL272843 ncbi | Pasteurella multocida multocida Pm70 | 0 |
PMOB403833 ncbi | Petrotoga mobilis SJ95 | 0 |
PMAR93060 ncbi | Prochlorococcus marinus MIT 9215 | 0 |
PMAR74546 ncbi | Prochlorococcus marinus MIT 9312 | 1 |
PMAR59920 ncbi | Prochlorococcus marinus NATL2A | 1 |
PMAR167555 ncbi | Prochlorococcus marinus NATL1A | 1 |
PMAR167546 ncbi | Prochlorococcus marinus MIT 9301 | 0 |
PMAR167542 ncbi | Prochlorococcus marinus MIT 9515 | 1 |
PMAR167540 | Prochlorococcus marinus pastoris MED4ax | 0 |
PMAR167539 ncbi | Prochlorococcus marinus marinus CCMP1375 | 1 |
PMAR146891 ncbi | Prochlorococcus marinus AS9601 | 0 |
PLUT319225 ncbi | Chlorobium luteolum DSM 273 | 0 |
PISL384616 ncbi | Pyrobaculum islandicum DSM 4184 | 1 |
PINT246198 | Prevotella intermedia 17 | 0 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PHAL326442 ncbi | Pseudoalteromonas haloplanktis TAC125 | 0 |
PGIN242619 ncbi | Porphyromonas gingivalis W83 | 0 |
PFUR186497 ncbi | Pyrococcus furiosus DSM 3638 | 0 |
PDIS435591 ncbi | Parabacteroides distasonis ATCC 8503 | 0 |
PCAR338963 ncbi | Pelobacter carbinolicus DSM 2380 | 0 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 0 |
PAST100379 | Onion yellows phytoplasma | 0 |
PARS340102 ncbi | Pyrobaculum arsenaticum DSM 13514 | 0 |
PAER178306 ncbi | Pyrobaculum aerophilum IM2 | 0 |
PACN267747 ncbi | Propionibacterium acnes KPA171202 | 0 |
PABY272844 ncbi | Pyrococcus abyssi GE5 | 0 |
OTSU357244 ncbi | Orientia tsutsugamushi Boryong | 0 |
NSP387092 ncbi | Nitratiruptor sp. SB155-2 | 0 |
NSP35761 | Nocardioides sp. | 1 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 0 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
NOCE323261 ncbi | Nitrosococcus oceani ATCC 19707 | 0 |
NMUL323848 ncbi | Nitrosospira multiformis ATCC 25196 | 0 |
NEUT335283 ncbi | Nitrosomonas eutropha C91 | 0 |
NEUR228410 ncbi | Nitrosomonas europaea ATCC 19718 | 0 |
NARO279238 ncbi | Novosphingobium aromaticivorans DSM 12444 | 0 |
MXAN246197 ncbi | Myxococcus xanthus DK 1622 | 0 |
MTUB419947 ncbi | Mycobacterium tuberculosis H37Ra | 0 |
MTUB336982 ncbi | Mycobacterium tuberculosis F11 | 0 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 0 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 0 |
MTBRV ncbi | Mycobacterium tuberculosis H37Rv | 0 |
MTBCDC ncbi | Mycobacterium tuberculosis CDC1551 | 0 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 0 |
MSUC221988 ncbi | Mannheimia succiniciproducens MBEL55E | 0 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 1 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 0 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 0 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 0 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 0 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 0 |
MMAR394221 ncbi | Maricaulis maris MCS10 | 0 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 0 |
MMAR267377 ncbi | Methanococcus maripaludis S2 | 1 |
MMAG342108 ncbi | Magnetospirillum magneticum AMB-1 | 1 |
MLEP272631 ncbi | Mycobacterium leprae TN | 0 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 1 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 0 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 0 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 0 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 0 |
MHUN323259 ncbi | Methanospirillum hungatei JF-1 | 0 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MFLO265311 ncbi | Mesoplasma florum L1 | 0 |
MFLA265072 ncbi | Methylobacillus flagellatus KT | 0 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 0 |
MCAP243233 ncbi | Methylococcus capsulatus Bath | 0 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 0 |
MBOV410289 ncbi | Mycobacterium bovis BCG str. Pasteur 1173P2 | 0 |
MBOV233413 ncbi | Mycobacterium bovis AF2122/97 | 0 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 0 |
MAVI243243 ncbi | Mycobacterium avium 104 | 0 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 0 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 0 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 0 |
LXYL281090 ncbi | Leifsonia xyli xyli CTCB07 | 0 |
LSAK314315 ncbi | Lactobacillus sakei sakei 23K | 0 |
LPNE400673 ncbi | Legionella pneumophila Corby | 0 |
LPNE297246 ncbi | Legionella pneumophila Paris | 0 |
LPNE297245 ncbi | Legionella pneumophila Lens | 0 |
LPNE272624 ncbi | Legionella pneumophila pneumophila Philadelphia 1 | 0 |
LINT267671 ncbi | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 0 |
LINT189518 ncbi | Leptospira interrogans serovar Lai str. 56601 | 0 |
LBOR355277 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 0 |
LBOR355276 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 0 |
LBIF456481 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) | 0 |
LBIF355278 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) | 0 |
ILOI283942 ncbi | Idiomarina loihiensis L2TR | 0 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 0 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 0 |
HSOM228400 ncbi | Haemophilus somnus 2336 | 0 |
HSOM205914 ncbi | Haemophilus somnus 129PT | 0 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 0 |
HPYL85963 ncbi | Helicobacter pylori J99 | 0 |
HPYL357544 ncbi | Helicobacter pylori HPAG1 | 0 |
HPY ncbi | Helicobacter pylori 26695 | 0 |
HNEP81032 | Hyphomonas neptunium | 0 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 0 |
HMAR272569 ncbi | Haloarcula marismortui ATCC 43049 | 0 |
HINF71421 ncbi | Haemophilus influenzae Rd KW20 | 0 |
HINF374930 ncbi | Haemophilus influenzae PittEE | 0 |
HINF281310 ncbi | Haemophilus influenzae 86-028NP | 0 |
HHAL349124 ncbi | Halorhodospira halophila SL1 | 0 |
HDUC233412 ncbi | Haemophilus ducreyi 35000HP | 0 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
HACI382638 ncbi | Helicobacter acinonychis Sheeba | 0 |
GVIO251221 ncbi | Gloeobacter violaceus PCC 7421 | 0 |
GURA351605 ncbi | Geobacter uraniireducens Rf4 | 0 |
GOXY290633 ncbi | Gluconobacter oxydans 621H | 1 |
GMET269799 ncbi | Geobacter metallireducens GS-15 | 0 |
GFOR411154 ncbi | Gramella forsetii KT0803 | 0 |
GBET391165 ncbi | Granulibacter bethesdensis CGDNIH1 | 0 |
FTUL458234 ncbi | Francisella tularensis holarctica FTNF002-00 | 0 |
FTUL418136 ncbi | Francisella tularensis tularensis WY96-3418 | 0 |
FTUL401614 ncbi | Francisella novicida U112 | 0 |
FTUL393115 ncbi | Francisella tularensis tularensis FSC198 | 0 |
FTUL393011 ncbi | Francisella tularensis holarctica OSU18 | 0 |
FTUL351581 | Francisella tularensis holarctica FSC200 | 0 |
FSUC59374 ncbi | Fibrobacter succinogenes succinogenes S85 | 0 |
FSP106370 ncbi | Frankia sp. CcI3 | 1 |
FRANT ncbi | Francisella tularensis tularensis SCHU S4 | 0 |
FPHI484022 ncbi | Francisella philomiragia philomiragia ATCC 25017 | 0 |
FMAG334413 ncbi | Finegoldia magna ATCC 29328 | 0 |
FJOH376686 ncbi | Flavobacterium johnsoniae UW101 | 0 |
ERUM302409 ncbi | Ehrlichia ruminantium Gardel | 0 |
ERUM254945 ncbi | Ehrlichia ruminantium Welgevonden | 0 |
ELIT314225 ncbi | Erythrobacter litoralis HTCC2594 | 0 |
ECHA205920 ncbi | Ehrlichia chaffeensis Arkansas | 0 |
ECAN269484 ncbi | Ehrlichia canis Jake | 0 |
DOLE96561 ncbi | Desulfococcus oleovorans Hxd3 | 0 |
DNOD246195 ncbi | Dichelobacter nodosus VCS1703A | 0 |
DARO159087 ncbi | Dechloromonas aromatica RCB | 0 |
CVES412965 ncbi | Candidatus Vesicomyosocius okutanii HA | 0 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 0 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 0 |
CTET212717 ncbi | Clostridium tetani E88 | 1 |
CTEP194439 ncbi | Chlorobium tepidum TLS | 0 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CSP78 | Caulobacter sp. | 0 |
CRUT413404 ncbi | Candidatus Ruthia magnifica Cm (Calyptogena magnifica) | 0 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 0 |
CPRO264201 ncbi | Candidatus Protochlamydia amoebophila UWE25 | 0 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 0 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 0 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 0 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 0 |
CPHY357809 ncbi | Clostridium phytofermentans ISDg | 0 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 0 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 0 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 0 |
CKLU431943 ncbi | Clostridium kluyveri DSM 555 | 1 |
CJAP155077 | Cellvibrio japonicus | 0 |
CHUT269798 ncbi | Cytophaga hutchinsonii ATCC 33406 | 0 |
CHOM360107 ncbi | Campylobacter hominis ATCC BAA-381 | 0 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 0 |
CDIP257309 ncbi | Corynebacterium diphtheriae NCTC 13129 | 0 |
CCUR360105 ncbi | Campylobacter curvus 525.92 | 0 |
CCON360104 ncbi | Campylobacter concisus 13826 | 0 |
CCHL340177 ncbi | Chlorobium chlorochromatii CaD3 | 0 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 1 |
CBUR434922 ncbi | Coxiella burnetii Dugway 5J108-111 | 0 |
CBUR360115 ncbi | Coxiella burnetii RSA 331 | 0 |
CBUR227377 ncbi | Coxiella burnetii RSA 493 | 0 |
CBOT508765 ncbi | Clostridium botulinum B str. Eklund 17B | 0 |
CBLO291272 ncbi | Candidatus Blochmannia pennsylvanicus BPEN | 0 |
CBLO203907 ncbi | Candidatus Blochmannia floridanus | 0 |
CAULO ncbi | Caulobacter crescentus CB15 | 0 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 1 |
BTUR314724 ncbi | Borrelia turicatae 91E135 | 0 |
BTHE226186 ncbi | Bacteroides thetaiotaomicron VPI-5482 | 0 |
BSP107806 ncbi | Buchnera aphidicola APS (Acyrthosiphon pisum) | 0 |
BHER314723 ncbi | Borrelia hermsii DAH | 0 |
BHAL272558 ncbi | Bacillus halodurans C-125 | 1 |
BGAR290434 ncbi | Borrelia garinii PBi | 0 |
BFRA295405 ncbi | Bacteroides fragilis YCH46 | 0 |
BFRA272559 ncbi | Bacteroides fragilis NCTC 9343 | 0 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 0 |
BBUR224326 ncbi | Borrelia burgdorferi B31 | 0 |
BBAC264462 ncbi | Bdellovibrio bacteriovorus HD100 | 0 |
BAPH372461 ncbi | Buchnera aphidicola Cc (Cinara cedri) | 0 |
BAPH198804 ncbi | Buchnera aphidicola Sg (Schizaphis graminum) | 0 |
BAFZ390236 ncbi | Borrelia afzelii PKo | 0 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 0 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
APLE434271 ncbi | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 0 |
APLE416269 ncbi | Actinobacillus pleuropneumoniae L20 | 0 |
APHA212042 ncbi | Anaplasma phagocytophilum HZ | 0 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
AORE350688 ncbi | Alkaliphilus oremlandii OhILAs | 1 |
AMAR234826 ncbi | Anaplasma marginale St. Maries | 0 |
ALAI441768 ncbi | Acholeplasma laidlawii PG-8A | 0 |
AFER243159 ncbi | Acidithiobacillus ferrooxidans ATCC 23270 | 0 |
AEHR187272 ncbi | Alkalilimnicola ehrlichii MLHE-1 | 0 |
ADEH290397 ncbi | Anaeromyxobacter dehalogenans 2CP-C | 0 |
ACRY349163 ncbi | Acidiphilium cryptum JF-5 | 0 |
ACEL351607 ncbi | Acidothermus cellulolyticus 11B | 0 |
ABUT367737 ncbi | Arcobacter butzleri RM4018 | 0 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 0 |
ABAC204669 ncbi | Candidatus Koribacter versatilis Ellin345 | 0 |
AAEO224324 ncbi | Aquifex aeolicus VF5 | 0 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 1.309e-10 | 16 | 92 |
Arrangment:Clusters | 0.0003742 | 15 | 17 |
Arrangment:Pairs | 0.0003999 | 37 | 112 |
Disease:Pharyngitis | 0.0021875 | 8 | 8 |
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever | 0.0002128 | 11 | 11 |
Disease:Wide_range_of_infections | 0.0088377 | 1 | 11 |
Disease:bronchitis_and_pneumonitis | 0.0021875 | 8 | 8 |
Endospores:No | 0.0000448 | 121 | 211 |
Endospores:Yes | 1.661e-6 | 9 | 53 |
GC_Content_Range4:0-40 | 2.027e-7 | 129 | 213 |
GC_Content_Range4:60-100 | 3.119e-8 | 40 | 145 |
GC_Content_Range7:0-30 | 0.0004389 | 33 | 47 |
GC_Content_Range7:30-40 | 0.0002636 | 96 | 166 |
GC_Content_Range7:40-50 | 0.0088833 | 65 | 117 |
GC_Content_Range7:50-60 | 0.0029081 | 38 | 107 |
GC_Content_Range7:60-70 | 3.979e-7 | 38 | 134 |
Genome_Size_Range5:0-2 | 5.940e-14 | 112 | 155 |
Genome_Size_Range5:2-4 | 0.0005538 | 110 | 197 |
Genome_Size_Range5:4-6 | 2.999e-12 | 48 | 184 |
Genome_Size_Range5:6-10 | 3.825e-10 | 3 | 47 |
Genome_Size_Range9:0-1 | 6.187e-10 | 27 | 27 |
Genome_Size_Range9:1-2 | 2.509e-7 | 85 | 128 |
Genome_Size_Range9:2-3 | 3.591e-6 | 78 | 120 |
Genome_Size_Range9:4-5 | 3.087e-6 | 25 | 96 |
Genome_Size_Range9:5-6 | 9.611e-6 | 23 | 88 |
Genome_Size_Range9:6-8 | 8.477e-9 | 2 | 38 |
Gram_Stain:Gram_Pos | 2.396e-7 | 44 | 150 |
Habitat:Host-associated | 2.816e-9 | 130 | 206 |
Habitat:Multiple | 5.093e-15 | 41 | 178 |
Habitat:Specialized | 0.0034961 | 34 | 53 |
Habitat:Terrestrial | 0.0028319 | 7 | 31 |
Motility:No | 0.0077245 | 82 | 151 |
Motility:Yes | 0.0000216 | 101 | 267 |
Optimal_temp.:30-37 | 0.0054312 | 14 | 18 |
Oxygen_Req:Anaerobic | 0.0043425 | 59 | 102 |
Oxygen_Req:Facultative | 4.253e-6 | 69 | 201 |
Salinity:Extreme_halophilic | 0.0047368 | 7 | 7 |
Shape:Pleomorphic | 0.0021875 | 8 | 8 |
Shape:Rod | 4.540e-8 | 131 | 347 |
Shape:Sphere | 0.0000976 | 17 | 19 |
Shape:Spiral | 0.0023807 | 24 | 34 |
Temp._range:Hyperthermophilic | 0.0050770 | 17 | 23 |
Temp._range:Mesophilic | 0.0014328 | 208 | 473 |
Org ID | Org Name | Pvalue | # genes in tgt genome found in org | # genes in group found in org |
LREU557436 ncbi | Lactobacillus reuteri DSM 20016 | 0.0067707 | 752 | 6 |
G6359 | EG12837 | EG12835 | EG12663 | EG12662 | EG12661 | |
LREU557436 | LREU_1512 | LREU_0099 | LREU_1513 | LREU_1511 | LREU_1514 | LREU_1513 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
GLUCARDEG-PWY (D-glucarate degradation I) | 152 | 103 | 0.5314 |
PWY-561 (superpathway of glyoxylate cycle) | 162 | 101 | 0.4818 |
PWY-6196 (serine racemization) | 102 | 76 | 0.4816 |
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation) | 135 | 90 | 0.4790 |
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) | 195 | 112 | 0.4735 |
GLYOXYLATE-BYPASS (glyoxylate cycle) | 169 | 102 | 0.4683 |
GALACTARDEG-PWY (D-galactarate degradation I) | 151 | 95 | 0.4670 |
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I) | 270 | 135 | 0.4661 |
GALACTITOLCAT-PWY (galactitol degradation) | 73 | 60 | 0.4599 |
GLUTAMINDEG-PWY (glutamine degradation I) | 191 | 108 | 0.4530 |
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation) | 149 | 92 | 0.4480 |
PWY0-981 (taurine degradation IV) | 106 | 73 | 0.4349 |
SO4ASSIM-PWY (sulfate reduction I (assimilatory)) | 311 | 141 | 0.4266 |
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation) | 212 | 111 | 0.4211 |
IDNCAT-PWY (L-idonate degradation) | 246 | 121 | 0.4156 |
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis) | 300 | 136 | 0.4117 |
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer) | 112 | 73 | 0.4105 |
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis) | 365 | 152 | 0.4086 |
PWY-4221 (pantothenate and coenzymeA biosynthesis II) | 112 | 72 | 0.4011 |
PWY-3941 (β-alanine biosynthesis II) | 117 | 74 | 0.4006 |
EG12837 | EG12835 | EG12663 | EG12662 | EG12661 | |
G6359 | 0.99948 | 0.999398 | 0.999728 | 0.999661 | 0.999822 |
EG12837 | 0.999866 | 0.999896 | 0.999484 | 0.999699 | |
EG12835 | 0.999732 | 0.999384 | 0.999682 | ||
EG12663 | 0.999765 | 0.999845 | |||
EG12662 | 0.999789 | ||||
EG12661 |
G6359 | EG12837 | EG12835 | EG12663 | EG12662 | EG12661 | |
G6359 | 0.0f0 | - | - | - | - | - |
EG12837 | - | 0.0f0 | - | 1.4e-74 | - | - |
EG12835 | - | - | 0.0f0 | - | - | 8.6e-27 |
EG12663 | - | 1.4e-69 | - | 0.0f0 | - | - |
EG12662 | - | - | - | - | 0.0f0 | - |
EG12661 | - | - | 1.2e-26 | - | - | 0.0f0 |