CANDIDATE ID: 126

CANDIDATE ID: 126

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9961987e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   2.8333333e-17

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7433 (ygcO) (b2767)
   Products of gene:
     - G7433-MONOMER (predicted 4Fe-4S cluster-containing protein)

- G7432 (ygcN) (b2766)
   Products of gene:
     - G7432-MONOMER (predicted oxidoreductase with FAD/NAD(P)-binding domain)

- G6923 (ydiT) (b1700)
   Products of gene:
     - G6923-MONOMER (putative ferredoxin)

- G6922 (ydiS) (b1699)
   Products of gene:
     - G6922-MONOMER (putative flavoprotein)

- EG11565 (fixX) (b0044)
   Products of gene:
     - EG11565-MONOMER (putative ferredoxin possibly involved in anaerobic carnitine metabolism)

- EG11564 (fixC) (b0043)
   Products of gene:
     - EG11564-MONOMER (flavoprotein (electron transport), possibly involved in anaerobic carnitine metabolism)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 84
Effective number of orgs (counting one per cluster within 468 clusters): 58

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XAUT78245 ncbi Xanthobacter autotrophicus Py26
TVOL273116 ncbi Thermoplasma volcanium GSS16
TSP28240 Thermotoga sp.6
TROS309801 ncbi Thermomicrobium roseum DSM 51596
TPET390874 ncbi Thermotoga petrophila RKU-16
TMAR243274 ncbi Thermotoga maritima MSB86
TACI273075 ncbi Thermoplasma acidophilum DSM 17286
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STOK273063 ncbi Sulfolobus tokodaii 76
SSON300269 ncbi Shigella sonnei Ss0466
SSOL273057 ncbi Sulfolobus solfataricus P26
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-46
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SBOY300268 ncbi Shigella boydii Sb2276
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6396
RSP357808 ncbi Roseiflexus sp. RS-16
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RCAS383372 ncbi Roseiflexus castenholzii DSM 139416
PTOR263820 ncbi Picrophilus torridus DSM 97906
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PISL384616 ncbi Pyrobaculum islandicum DSM 41846
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135146
PAER178306 ncbi Pyrobaculum aerophilum IM26
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSP409 Methylobacterium sp.6
MSED399549 ncbi Metallosphaera sedula DSM 53486
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
LCHO395495 ncbi Leptothrix cholodnii SP-66
GURA351605 ncbi Geobacter uraniireducens Rf46
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255866
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
DRED349161 ncbi Desulfotomaculum reducens MI-16
DHAF138119 ncbi Desulfitobacterium hafniense Y516
CMAQ397948 ncbi Caldivirga maquilingensis IC-1676
CKLU431943 ncbi Clostridium kluyveri DSM 5556
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
BXEN266265 ncbi Burkholderia xenovorans LB4006
BVIE269482 ncbi Burkholderia vietnamiensis G46
BSP376 Bradyrhizobium sp.6
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
APER272557 ncbi Aeropyrum pernix K15
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716


Names of the homologs of the genes in the group in each of these orgs
  G7433   G7432   G6923   G6922   EG11565   EG11564   
XAUT78245 XAUT_0139XAUT_0140XAUT_0139XAUT_0140XAUT_0139XAUT_0140
TVOL273116 TVN1279TVN1278TVN1279TVN1278TVN1279TVN1278
TSP28240 TRQ2_1196TRQ2_1195TRQ2_1196TRQ2_1195TRQ2_1196TRQ2_1195
TROS309801 TRD_A0378TRD_0044TRD_A0378TRD_0044TRD_A0378TRD_0044
TPET390874 TPET_1259TPET_1260TPET_1259TPET_1260TPET_1259TPET_1260
TMAR243274 TM_1533TM_1532TM_1533TM_1532TM_1533TM_1532
TACI273075 TA0327TA0326TA0327TA0326TA0327TA0326
SWOL335541 SWOL_2123SWOL_2124SWOL_2123SWOL_2124SWOL_2123SWOL_2124
STYP99287 STM1351STM1352STM1351STM1352STM0078STM0077
STOK273063 STS199ST1795STS199ST1795STS201ST1795
SSON300269 SSO_2920SSO_2919SSO_0052SSO_0051SSO_0052SSO_0051
SSOL273057 SSO11231SSO2776SSO11114SSO2776SSO11114SSO2776
SSED425104 SSED_3233SSED_3232SSED_3233SSED_3232SSED_3233SSED_3232
SPEA398579 SPEA_4042SPEA_4041SPEA_4042SPEA_4041SPEA_4042SPEA_4041
SMEL266834 SMA0816SMA0817SMA0816SMA0817SMA0816SMA0817
SMED366394 SMED_6231SMED_6230SMED_6231SMED_6230SMED_6231SMED_6230
SLOI323850 SHEW_2680SHEW_2679SHEW_2680SHEW_2679SHEW_2680SHEW_2679
SHIGELLA YGCOYGCNYDITYDISFIXXYDIS
SHAL458817 SHAL_0216SHAL_0217SHAL_0216SHAL_0217SHAL_0216SHAL_0217
SFUM335543 SFUM_3926SFUM_3927SFUM_3926SFUM_3927SFUM_3926SFUM_3927
SFLE373384 SFV_2738SFV_2739SFV_1524SFV_1525SFV_0038SFV_0037
SFLE198214 AAN44272.1AAN44271.1AAN43120.1AAN43121.1AAN41707.1AAN41706.1
SENT454169 SEHA_C0084SEHA_C0083SEHA_C0084SEHA_C1482SEHA_C0084SEHA_C0083
SENT321314 SCH_1370SCH_0072SCH_1370SCH_1371SCH_0073SCH_0072
SENT295319 SPA0079SPA0078SPA0079SPA0078SPA0079SPA0078
SENT220341 STY0088STY0087STY0088STY0087STY0088STY0087
SENT209261 T0079T0078T0079T0078T0079T0078
SDYS300267 SDY_2969SDY_2968SDY_1792SDY_1791SDY_0066SDY_0065
SBOY300268 SBO_2651SBO_2650SBO_1431SBO_1432SBO_1431SBO_1432
SACI330779 SACI_0317SACI_0292SACI_0317SACI_0292SACI_0317SACI_0292
RSP357808 ROSERS_0959ROSERS_0958ROSERS_0959ROSERS_0958ROSERS_0959ROSERS_0958
RRUB269796 RRU_A2264RRU_A2265RRU_A2264RRU_A2265RRU_A2264RRU_A2265
RPAL316058 RPB_0987RPB_0986RPB_0987RPB_0986RPB_0987RPB_0986
RPAL316057 RPD_1091RPD_1090RPD_1091RPD_1090RPD_1091RPD_1090
RPAL316056 RPC_4445RPC_4446RPC_4445RPC_4446RPC_4445RPC_4446
RPAL316055 RPE_4515RPE_4516RPE_4515RPE_4516RPE_4515RPE_4516
RPAL258594 RPA4602RPA4603RPA4602RPA4603RPA4602RPA4603
RLEG216596 PRL100197PRL100198PRL100197PRL100198PRL100197PRL100198
RCAS383372 RCAS_3599RCAS_3598RCAS_3599RCAS_3598RCAS_3599RCAS_3598
PTOR263820 PTO1385PTO1384PTO1385PTO0398PTO1385PTO0398
PTHE370438 PTH_1765PTH_2430PTH_0019PTH_2430PTH_0019PTH_2430
PNAP365044 PNAP_2316PNAP_2315PNAP_2316PNAP_2315PNAP_2316PNAP_2315
PISL384616 PISL_0647PISL_0648PISL_0647PISL_0648PISL_0647PISL_0648
PARS340102 PARS_2370PARS_2369PARS_2370PARS_2369PARS_2370PARS_2369
PAER178306 PAE0723PAE0725PAE0723PAE0725PAE0723PAE0725
MTHE264732 MOTH_0061MOTH_0060MOTH_0061MOTH_0060MOTH_0061MOTH_0060
MSP409 M446_3574M446_3575M446_3574M446_3575M446_3574M446_3575
MSED399549 MSED_1250MSED_0333MSED_0334MSED_0333MSED_0334MSED_0333
MLOT266835 MSL5859MLL5860MSL5859MLL5860MSL5859MLL5860
LCHO395495 LCHO_1371LCHO_1370LCHO_1371LCHO_1370LCHO_1371LCHO_1370
GURA351605 GURA_3555GURA_3556GURA_3555GURA_3556GURA_3555GURA_3556
FNUC190304 FN1545FN1544FN1545FN1544FN1545FN1544
EFER585054 EFER_0052EFER_0051EFER_0052EFER_0051EFER_0052EFER_0051
ECOO157 Z4077YGCNYDITYDISFIXXFIXC
ECOL83334 ECS3622ECS3621ECS2407ECS2406ECS0047ECS2406
ECOL585397 ECED1_3216ECED1_3215ECED1_1902ECED1_1901ECED1_0043ECED1_1901
ECOL585057 ECIAI39_2949ECIAI39_2948ECIAI39_1357ECIAI39_1358ECIAI39_0045ECIAI39_0044
ECOL585056 ECUMN_3095ECUMN_3094ECUMN_1990ECUMN_1989ECUMN_0046ECUMN_1989
ECOL585055 EC55989_3041EC55989_3040EC55989_1868EC55989_1867EC55989_0044EC55989_0043
ECOL585035 ECS88_3032ECS88_3031ECS88_1751ECS88_1750ECS88_0047ECS88_1750
ECOL585034 ECIAI1_2872ECIAI1_2871ECIAI1_1754ECIAI1_1753ECIAI1_0046ECIAI1_1753
ECOL481805 ECOLC_0945ECOLC_0946ECOLC_1931ECOLC_1932ECOLC_3611ECOLC_3612
ECOL469008 ECBD_0962ECBD_0963ECBD_1946ECBD_1947ECBD_3571ECBD_1947
ECOL439855 ECSMS35_2896ECSMS35_2895ECSMS35_1495ECSMS35_1496ECSMS35_0046ECSMS35_0045
ECOL413997 ECB_02612ECB_02611ECB_01669ECB_01668ECB_00048ECB_01668
ECOL409438 ECSE_3023ECSE_3022ECSE_1824ECSE_1823ECSE_0045ECSE_0044
ECOL405955 APECO1_3765APECO1_3766APECO1_776APECO1_775APECO1_776APECO1_775
ECOL364106 UTI89_C3131UTI89_C3130UTI89_C1893UTI89_C1892UTI89_C0050UTI89_C1892
ECOL362663 ECP_2741ECP_2740ECP_1647ECP_1646ECP_0044ECP_1646
ECOL331111 ECE24377A_3069ECE24377A_3068ECE24377A_1917ECE24377A_1916ECE24377A_0048ECE24377A_0047
ECOL316407 ECK2762:JW2737:B2767ECK2761:JW2736:B2766ECK1698:JW1690:B1700ECK1697:JW1689:B1699ECK0045:JW0043:B0044ECK0044:JW0042:B0043
ECOL199310 C3326C3325C2096C2095C0054C2095
DRED349161 DRED_0575DRED_0574DRED_0575DRED_0574DRED_0575DRED_0574
DHAF138119 DSY4295DSY4296DSY0945DSY4296DSY4295DSY0944
CMAQ397948 CMAQ_0478CMAQ_0479CMAQ_0478CMAQ_0479CMAQ_0478CMAQ_0479
CKLU431943 CKL_1499CKL_1498CKL_1499CKL_1498CKL_1499CKL_1498
CHYD246194 CHY_2475CHY_2476CHY_2475CHY_2476CHY_2475CHY_2476
BXEN266265 BXE_B1433BXE_B1434BXE_B1433BXE_B1434BXE_B1433BXE_B1434
BVIE269482 BCEP1808_5981BCEP1808_5982BCEP1808_5981BCEP1808_5982BCEP1808_5981BCEP1808_5982
BSP376 BRADO5383BRADO5384BRADO5383BRADO5384BRADO5383BRADO5384
BJAP224911 BSR1775BLR1774BSR1775BLR1774BSR1775BLR1774
APER272557 APE2460APE2421APE2421APE2460APE2421
AFER243159 AFE_1607AFE_1606AFE_1607AFE_1606AFE_1607AFE_1606
ACAU438753 AZC_3450AZC_3449AZC_3450AZC_3449AZC_3450AZC_3449


Organism features enriched in list (features available for 80 out of the 84 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 6.230e-6192
Arrangment:Pairs 0.000961726112
Disease:Dysentery 5.654e-666
Disease:Urinary_tract_infection 0.008674534
GC_Content_Range4:0-40 1.390e-97213
GC_Content_Range4:40-60 4.060e-853224
GC_Content_Range7:0-30 0.0058426147
GC_Content_Range7:30-40 7.408e-76166
GC_Content_Range7:50-60 8.749e-1239107
Genome_Size_Range5:0-2 0.00001797155
Genome_Size_Range5:2-4 0.000728515197
Genome_Size_Range5:4-6 1.213e-1051184
Genome_Size_Range9:1-2 0.00059827128
Genome_Size_Range9:3-4 0.0000692177
Genome_Size_Range9:4-5 0.00126882396
Genome_Size_Range9:5-6 8.730e-72888
Gram_Stain:Gram_Neg 0.000072361333
Gram_Stain:Gram_Pos 2.714e-74150
Habitat:Specialized 0.00058861653
Motility:No 0.001008710151
Motility:Yes 4.969e-757267
Optimal_temp.:25-30 0.0015726819
Optimal_temp.:80 0.002500633
Oxygen_Req:Aerobic 0.002403415185
Oxygen_Req:Facultative 8.996e-849201
Shape:Rod 0.000147862347
Temp._range:Hyperthermophilic 0.0014475923
Temp._range:Mesophilic 0.001679755473
Temp._range:Thermophilic 0.00309861135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 374
Effective number of orgs (counting one per cluster within 468 clusters): 281

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317580
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329530
YPES386656 ncbi Yersinia pestis Pestoides F0
YPES377628 ncbi Yersinia pestis Nepal5160
YPES360102 ncbi Yersinia pestis Antiqua0
YPES349746 ncbi Yersinia pestis Angola0
YPES214092 ncbi Yersinia pestis CO920
YPES187410 ncbi Yersinia pestis KIM 100
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80810
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VFIS312309 ncbi Vibrio fischeri ES1140
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP1755 Thermoanaerobacter sp.0
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
STRO369723 ncbi Salinispora tropica CNB-4401
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1148 ncbi Synechocystis sp. PCC 68030
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPRO399741 ncbi Serratia proteamaculans 5680
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2051
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO10
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MXAN246197 ncbi Myxococcus xanthus DK 16220
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785780
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ESP42895 Enterobacter sp.0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10430
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7433   G7432   G6923   G6922   EG11565   EG11564   
YPSE349747
YPSE273123
YPES386656
YPES377628
YPES360102
YPES349746
YPES214092
YPES187410
YENT393305
WSUC273121
WPIP955
WPIP80849
VFIS312309
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TTHE300852
TTHE262724
TTEN273068
TSP1755
TPSE340099
TPEN368408 TPEN_1199
TPAL243276
TLET416591
TKOD69014 TK1088
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
STRO369723 STROP_4066
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588 SYNW1756OR0620
SSP64471
SSP387093
SSP1148
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPRO399741
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SHAE279808
SGOR29390
SGLO343509
SERY405948 SACE_6903
SEPI176280
SEPI176279
SELO269084
SCO SCO1073
SAVE227882 SAV1470
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037 SARE_4464
SAGA211110
SAGA208435
SAGA205921
SACI56780
RXYL266117
RTYP257363
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PSP117
PRUM264731
PPEN278197
PMUL272843
PMOB403833
PMAR93060
PMAR74547 PMT1246
PMAR74546
PMAR59920 PMN2A_1852
PMAR167555 NATL1_05771
PMAR167546
PMAR167540 PMM0520
PMAR167539 PRO_0520
PMAR146891
PLUM243265
PINT246198
PING357804
PGIN242619
PFUR186497 PF0097
PDIS435591
PCAR338963
PAST100379
OTSU357244
OIHE221109
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261 NOC_0982
NMUL323848
NFAR247156
NEUT335283
NEUR228410
MXAN246197
MTUB419947 MRA_0568
MTUB336982 TBFG_10571
MTHE187420 MTH1718
MTBRV RV0561C
MTBCDC MT0587
MSYN262723
MSUC221988
MSTA339860 MSP_0874
MSP189918
MSP164757
MSP164756
MSME246196 MSMEG_1132
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAR444158
MMAR426368 MMARC7_1386
MMAR402880
MMAR267377 MMP0388
MLEP272631
MLAB410358 MLAB_0431
MJAN243232 MJ_0532
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_5254
MGEN243273
MFLO265311
MCAP340047
MCAP243233
MBOV410289 BCG_0606C
MBOV233413 MB0576C
MAVI243243
MART243272
MAER449447
MAEO419665
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
KPNE272620
IHOS453591
HWAL362976 HQ1520A
HSP64091 VNG0468C
HSOM228400
HSOM205914
HSAL478009 OE1699R
HPYL85963
HPYL357544
HPY
HMOD498761
HINF71421
HINF374930
HINF281310
HHEP235279
HDUC233412
HBUT415426
HAUR316274
HACI382638
GSUL243231
GMET269799
GKAU235909
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_6095
FSP106370 FRANCCI3_0537
FRANT
FPHI484022
FNOD381764
FMAG334413
FJOH376686
FALN326424 FRAAL1031
ESP42895
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAR218491
ECAN269484
DVUL882
DSP255470
DSP216389
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DGEO319795
DETH243164
DDES207559
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CKOR374847 KCR_1359
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHUT269798 CHU_1087
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974
CCUR360105
CCON360104
CCAV227941
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402
CACE272562
CABO218497
BWEI315730
BTUR314724
BTHU412694
BTHU281309
BTHE226186
BSUB
BSP107806
BPUM315750
BLON206672
BLIC279010
BHER314723
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749 BCER98_1825
BCER288681
BCER226900
BBUR224326
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
AYEL322098
AVAR240292
AURANTIMONAS
ASP1667
APLE434271
APLE416269
APHA212042
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AFUL224325 AF_0464
AEHR187272
ADEH290397
ACEL351607
ABUT367737
AAUR290340
AAEO224324


Organism features enriched in list (features available for 351 out of the 374 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.057e-77792
Arrangment:Clusters 0.00015321717
Disease:Food_poisoning 0.009972299
Disease:Pneumonia 0.00210181212
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00353591111
Disease:Wide_range_of_infections 0.00353591111
Endospores:No 0.0007872144211
Endospores:Yes 1.708e-64753
GC_Content_Range4:0-40 1.714e-34194213
GC_Content_Range4:40-60 2.525e-7106224
GC_Content_Range4:60-100 3.103e-1350145
GC_Content_Range7:0-30 7.289e-94547
GC_Content_Range7:30-40 1.377e-22149166
GC_Content_Range7:50-60 1.667e-1232107
GC_Content_Range7:60-70 6.635e-1739134
GC_Content_Range7:70-100 0.00353591111
Genome_Size_Range5:0-2 1.198e-20139155
Genome_Size_Range5:4-6 6.375e-1568184
Genome_Size_Range5:6-10 0.00010261647
Genome_Size_Range9:0-1 7.415e-72727
Genome_Size_Range9:1-2 3.487e-14112128
Genome_Size_Range9:4-5 0.00006914196
Genome_Size_Range9:5-6 9.031e-102788
Genome_Size_Range9:6-8 0.00001021038
Gram_Stain:Gram_Neg 1.985e-22145333
Gram_Stain:Gram_Pos 3.439e-29143150
Habitat:Aquatic 0.00710224591
Habitat:Host-associated 0.0020695139206
Motility:No 1.326e-9121151
Motility:Yes 6.878e-13119267
Optimal_temp.:30-37 0.00009041818
Optimal_temp.:37 0.004174375106
Oxygen_Req:Aerobic 0.000155792185
Oxygen_Req:Anaerobic 0.000815075102
Pathogenic_in:Human 0.0000839149213
Pathogenic_in:No 0.0077720124226
Salinity:Non-halophilic 0.000289479106
Shape:Coccus 0.00004716582
Shape:Rod 5.977e-12170347
Shape:Sphere 0.00070521819
Shape:Spiral 0.00020683034



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 12
Effective number of orgs (counting one per cluster within 468 clusters): 12

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TVOL273116 ncbi Thermoplasma volcanium GSS1 0.00002933056
PISL384616 ncbi Pyrobaculum islandicum DSM 4184 0.00004063226
PTOR263820 ncbi Picrophilus torridus DSM 9790 0.00004223246
TACI273075 ncbi Thermoplasma acidophilum DSM 1728 0.00004803316
PAER178306 ncbi Pyrobaculum aerophilum IM2 0.00006613496
STOK273063 ncbi Sulfolobus tokodaii 7 0.00007973606
SACI330779 ncbi Sulfolobus acidocaldarius DSM 639 0.00008113616
PARS340102 ncbi Pyrobaculum arsenaticum DSM 13514 0.00008113616
MSED399549 ncbi Metallosphaera sedula DSM 5348 0.00009113686
CMAQ397948 ncbi Caldivirga maquilingensis IC-167 0.00009263696
SSOL273057 ncbi Sulfolobus solfataricus P2 0.00016984086
APER272557 ncbi Aeropyrum pernix K1 0.00223322985


Names of the homologs of the genes in the group in each of these orgs
  G7433   G7432   G6923   G6922   EG11565   EG11564   
TVOL273116 TVN1279TVN1278TVN1279TVN1278TVN1279TVN1278
PISL384616 PISL_0647PISL_0648PISL_0647PISL_0648PISL_0647PISL_0648
PTOR263820 PTO1385PTO1384PTO1385PTO0398PTO1385PTO0398
TACI273075 TA0327TA0326TA0327TA0326TA0327TA0326
PAER178306 PAE0723PAE0725PAE0723PAE0725PAE0723PAE0725
STOK273063 STS199ST1795STS199ST1795STS201ST1795
SACI330779 SACI_0317SACI_0292SACI_0317SACI_0292SACI_0317SACI_0292
PARS340102 PARS_2370PARS_2369PARS_2370PARS_2369PARS_2370PARS_2369
MSED399549 MSED_1250MSED_0333MSED_0334MSED_0333MSED_0334MSED_0333
CMAQ397948 CMAQ_0478CMAQ_0479CMAQ_0478CMAQ_0479CMAQ_0478CMAQ_0479
SSOL273057 SSO11231SSO2776SSO11114SSO2776SSO11114SSO2776
APER272557 APE2460APE2421APE2421APE2460APE2421


Organism features enriched in list (features available for 12 out of the 12 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Endospores:No 0.000091911211
Genome_Size_Range9:2-3 0.00359377120
Gram_Stain:Gram_Neg 0.00055401333
Habitat:Specialized 9.517e-101053
Optimal_temp.:- 0.00835421257
Optimal_temp.:100 0.001147023
Optimal_temp.:60 0.002254524
Optimal_temp.:85 0.002254524
Pathogenic_in:No 0.000191011226
Shape:Pleomorphic 0.009810828
Temp._range:Hyperthermophilic 1.466e-6623
Temp._range:Thermophilic 0.0000207635



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1355 (formate to trimethylamine N-oxide electron transfer)31250.4500
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45300.4345
P283-PWY (hydrogen oxidation I (aerobic))78390.4045



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7432   G6923   G6922   EG11565   EG11564   
G74330.9995910.9995160.9994960.9995190.999448
G74320.9995070.9999580.9995150.99996
G69230.9995790.9995710.999541
G69220.9995490.999961
EG115650.999587
EG11564



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PAIRWISE BLAST SCORES:

  G7433   G7432   G6923   G6922   EG11565   EG11564   
G74330.0f0-5.7e-16-1.7e-16-
G7432-0.0f0-2.9e-76-5.6e-73
G69235.7e-16-0.0f0-9.5e-30-
G6922-1.4e-76-0.0f0-1.5e-125
EG115651.7e-16-9.5e-30-0.0f0-
EG11564-3.7e-76-1.3e-130-0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6922 G6923 (centered at G6923)
G7432 G7433 (centered at G7433)
EG11564 EG11565 (centered at EG11565)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7433   G7432   G6923   G6922   EG11565   EG11564   
87/623251/62385/623245/62386/623274/623
AAVE397945:0:Tyes-0-0-0
ABAC204669:0:Tyes-0-0-0
ABAU360910:0:Tyes-0-0-0
ABOR393595:0:Tyes-0-0-0
ACAU438753:0:Tyes101010
ACRY349163:8:Tyes---0-0
AFER243159:0:Tyes101010
AFUL224325:0:Tyes-----0
AHYD196024:0:Tyes-0-0-0
APER272557:0:Tyes390-0390
ASAL382245:5:Tyes-0-0-0
ASP232721:2:Tyes-0-0-0
ASP62928:0:Tyes-860-0-860
ASP62977:0:Tyes-0-0-0
ASP76114:2:Tyes-2529-0-2529
BABO262698:1:Tno-0-0-0
BAMB339670:1:Tno---0-0
BAMB339670:3:Tno-0----
BAMB398577:1:Tno---0-0
BAMB398577:3:Tno-0----
BBAC264462:0:Tyes-0-0-0
BBAC360095:0:Tyes-0-0-0
BBRO257310:0:Tyes-0-0-0
BCAN483179:1:Tno-0-0-0
BCEN331271:2:Tno-0-0-0
BCEN331272:3:Tyes-0-0-0
BCER315749:1:Tyes-----0
BHEN283166:0:Tyes-0-0-0
BJAP224911:0:Fyes101010
BMAL243160:1:Tno-0-0-0
BMAL320388:1:Tno-0-0-0
BMAL320389:1:Tyes-0-0-0
BMEL224914:1:Tno-0-0-0
BMEL359391:1:Tno-0-0-0
BOVI236:1:Tyes-0-0-0
BPAR257311:0:Tno-0-0-0
BPER257313:0:Tyes-0-0-0
BPET94624:0:Tyes-0-0-0
BPSE272560:1:Tyes-0-0-0
BPSE320372:1:Tno-0-0-0
BPSE320373:1:Tno-0-0-0
BQUI283165:0:Tyes-0-0-0
BSP36773:0:Tyes-0-0--
BSP36773:2:Tyes-----0
BSP376:0:Tyes010101
BSUI204722:1:Tyes-0-0-0
BSUI470137:1:Tno-0-0-0
BTHA271848:1:Tno-0-0-0
BTRI382640:1:Tyes-0-0-0
BVIE269482:5:Tyes010101
BXEN266265:1:Tyes101010
CAULO:0:Tyes-0-0-0
CBUR227377:1:Tyes-0-0-0
CBUR360115:1:Tno-0-0-0
CBUR434922:2:Tno-0-0-0
CCHL340177:0:Tyes-0-0-0
CHUT269798:0:Tyes-----0
CHYD246194:0:Tyes010101
CJAP155077:0:Tyes-0-0-0
CKLU431943:1:Tyes101010
CKOR374847:0:Tyes-----0
CMAQ397948:0:Tyes010101
CPEL335992:0:Tyes-0-0-0
CPSY167879:0:Tyes-0-0-0
CSAL290398:0:Tyes-0---0
CSP501479:7:Fyes-0-0-0
CSP78:2:Tyes-0-0-0
CVIO243365:0:Tyes-0-0-0
DARO159087:0:Tyes-0-0-0
DHAF138119:0:Tyes338933901339033890
DRED349161:0:Tyes101010
DSHI398580:5:Tyes-0-0-0
ECOL199310:0:Tno319831971984198301983
ECOL316407:0:Tno272327221665166410
ECOL331111:6:Tno289228911789178810
ECOL362663:0:Tno269226911590158901589
ECOL364106:1:Tno307430731839183801838
ECOL405955:2:Tyes114611451010
ECOL409438:6:Tyes303530341810180910
ECOL413997:0:Tno257925781621162001620
ECOL439855:4:Tno277127701401140210
ECOL469008:0:Tno019889892598989
ECOL481805:0:Tno0198999026762677
ECOL585034:0:Tno279727961699169801698
ECOL585035:0:Tno288528841649164801648
ECOL585055:0:Tno297729761821182010
ECOL585056:2:Tno306730661954195301953
ECOL585057:0:Tno290829071334133510
ECOL585397:0:Tno308030791789178801788
ECOL83334:0:Tno365736562410240902409
ECOLI:0:Tno278227811695169410
ECOO157:0:Tno366936682452245110
EFER585054:1:Tyes101010
ELIT314225:0:Tyes-0-0-0
FALN326424:0:Tyes-----0
FNUC190304:0:Tyes101010
FSP106370:0:Tyes-----0
FSP1855:0:Tyes-----0
GBET391165:0:Tyes-0-0-0
GOXY290633:5:Tyes-0-0-0
GTHE420246:1:Tyes0-0-0-
GURA351605:0:Tyes010101
GVIO251221:0:Tyes-0-0-0
HARS204773:0:Tyes-0-0-0
HCHE349521:0:Tyes-0-0-0
HHAL349124:0:Tyes-0-0-0
HMAR272569:8:Tyes-0-0-0
HMUK485914:1:Tyes-0-0-0
HNEP81032:0:Tyes-0-0-0
HSAL478009:4:Tyes-0----
HSP64091:2:Tno-0----
HWAL362976:1:Tyes-----0
ILOI283942:0:Tyes-0-0-0
JSP290400:1:Tyes-0-0-0
JSP375286:0:Tyes-0-0-0
LCHO395495:0:Tyes101010
LPNE272624:0:Tno-0-0-0
LPNE297245:1:Fno-0-0-0
LPNE297246:1:Fyes-0-0-0
LPNE400673:0:Tno-0-0-0
MACE188937:0:Tyes-0-0-0
MAQU351348:2:Tyes-0---0
MBAR269797:1:Tyes-0-0-0
MBOV233413:0:Tno-0----
MBOV410289:0:Tno-0----
MBUR259564:0:Tyes70-0-60
MEXT419610:0:Tyes-0-0-0
MFLA265072:0:Tyes-0-0-0
MGIL350054:3:Tyes-0----
MJAN243232:2:Tyes-----0
MKAN190192:0:Tyes-0-0-0
MLAB410358:0:Tyes-----0
MLOT266835:2:Tyes010101
MMAG342108:0:Tyes---0-0
MMAR267377:0:Tyes-----0
MMAR368407:0:Tyes---1224-0
MMAR394221:0:Tyes-0-0-0
MMAR426368:0:Tyes-----0
MMAZ192952:0:Tyes-0-0-395
MPET420662:1:Tyes-0-0-0
MSED399549:0:Tyes90201010
MSME246196:0:Tyes-0----
MSP266779:3:Tyes-0-0-0
MSP400668:0:Tyes-0-0-0
MSP409:2:Tyes010101
MSTA339860:0:Tyes-----0
MTBCDC:0:Tno-0----
MTBRV:0:Tno-0----
MTHE187420:0:Tyes-----0
MTHE264732:0:Tyes101010
MTHE349307:0:Tyes---0-0
MTUB336982:0:Tno-0----
MTUB419947:0:Tyes-0----
MVAN350058:0:Tyes-0---1050
NARO279238:0:Tyes-0-0-0
NGON242231:0:Tyes-0-0-0
NHAM323097:2:Tyes-0-0-0
NMEN122586:0:Tno-0-0-0
NMEN122587:0:Tyes-0-0-0
NMEN272831:0:Tno-0-0-0
NMEN374833:0:Tno-0-0-0
NOCE323261:1:Tyes-----0
NWIN323098:0:Tyes-0-0-0
OANT439375:5:Tyes-0-0-0
OCAR504832:0:Tyes-0-0-0
PABY272844:0:Tyes---0-0
PACN267747:0:Tyes-0-0-0
PAER178306:0:Tyes010101
PAER208963:0:Tyes-0-0-0
PAER208964:0:Tno-0-0-0
PARC259536:0:Tyes-0-0-0
PARS340102:0:Tyes101010
PATL342610:0:Tyes-0---0
PCRY335284:1:Tyes-0-0-0
PENT384676:0:Tyes-0-0-0
PFLU205922:0:Tyes-0-0-0
PFLU216595:1:Tyes-0-0-0
PFLU220664:0:Tyes-0---0
PFUR186497:0:Tyes---0--
PHAL326442:1:Tyes-0-0-0
PHOR70601:0:Tyes---0-0
PISL384616:0:Tyes010101
PLUT319225:0:Tyes-0-0-0
PMAR167539:0:Tyes-----0
PMAR167540:0:Tyes-----0
PMAR167542:0:Tyes-0---0
PMAR167555:0:Tyes-----0
PMAR59920:0:Tno-----0
PMAR74547:0:Tyes-----0
PMEN399739:0:Tyes-0-0-0
PNAP365044:8:Tyes101010
PPRO298386:1:Tyes-0-0-0
PPUT160488:0:Tno-0-0-0
PPUT351746:0:Tyes-0-0-0
PPUT76869:0:Tno-0-0-0
PSP296591:0:Tyes-0---0
PSP296591:2:Tyes---0--
PSP312153:0:Tyes-0-0-0
PSP56811:2:Tyes-0-0-0
PSTU379731:0:Tyes-0-0-0
PSYR205918:0:Tyes-0-0-0
PSYR223283:2:Tyes-0-0-0
PTHE370438:0:Tyes179224610246102461
PTOR263820:0:Tyes101810171018010180
RCAS383372:0:Tyes101010
RDEN375451:4:Tyes-0-0-0
RETL347834:5:Tyes-0-0-0
REUT264198:3:Tyes-0-0-0
REUT381666:2:Tyes-0-0-0
RFER338969:1:Tyes-1145-1145-0
RLEG216596:3:Tyes010101
RMET266264:2:Tyes-0-0-0
RPAL258594:0:Tyes010101
RPAL316055:0:Tyes010101
RPAL316056:0:Tyes010101
RPAL316057:0:Tyes101010
RPAL316058:0:Tyes101010
RPOM246200:1:Tyes-0-0-0
RRUB269796:1:Tyes010101
RSOL267608:1:Tyes-0-0-0
RSP357808:0:Tyes101010
RSPH272943:4:Tyes-0-0-0
RSPH349101:2:Tno-0-0-0
RSPH349102:5:Tyes-0-0-0
SACI330779:0:Tyes250250250
SALA317655:1:Tyes-0-0-0
SARE391037:0:Tyes-----0
SAVE227882:1:Fyes-----0
SBAL399599:3:Tyes-0-0-0
SBAL402882:1:Tno-0-0-0
SBOY300268:1:Tyes115411530101
SCO:2:Fyes-----0
SDEG203122:0:Tyes-0-0-0
SDEN318161:0:Tyes-0-0-0
SDYS300267:1:Tyes274427431633163210
SENT209261:0:Tno101010
SENT220341:0:Tno101010
SENT295319:0:Tno101010
SENT321314:2:Tno132301323132410
SENT454169:2:Tno101135210
SERY405948:0:Tyes-----0
SFLE198214:0:Tyes263826371447144810
SFLE373384:0:Tno255825591409141010
SFUM335543:0:Tyes010101
SHAL458817:0:Tyes010101
SHIGELLA:0:Tno258225811457145801458
SLAC55218:1:Fyes-0-0-0
SLOI323850:0:Tyes101010
SMED366394:1:Tyes101010
SMEL266834:0:Tyes010101
SONE211586:1:Tyes-0-0-0
SPEA398579:0:Tno101010
SSED425104:0:Tyes101010
SSOL273057:0:Tyes4610101
SSON300269:1:Tyes273327321010
SSP1131:0:Tyes---0-0
SSP292414:1:Tyes-0-0-0
SSP321327:0:Tyes-0-0-0
SSP321332:0:Tyes-0-0-0
SSP644076:2:Fyes-0-0-0
SSP84588:0:Tyes---0--
SSP94122:1:Tyes-0-0-0
STOK273063:0:Tyes0220222322
STRO369723:0:Tyes-----0
STYP99287:1:Tyes126212631262126310
SWOL335541:0:Tyes010101
TACI273075:0:Tyes101010
TKOD69014:0:Tyes---0--
TMAR243274:0:Tyes101010
TPEN368408:1:Tyes-----0
TPET390874:0:Tno010101
TROS309801:0:Tyes0-0-0-
TROS309801:1:Tyes-0-0-0
TSP28240:0:Tyes101010
TTUR377629:0:Tyes-0-0-0
TVOL273116:0:Tyes101010
VEIS391735:1:Tyes-0-0-0
VPAR223926:0:Tyes-0-519-0
VVUL196600:1:Tyes-0-0-0
VVUL216895:0:Tno-0-0-0
XAUT78245:1:Tyes010101
XAXO190486:0:Tyes-0-0-0
XCAM190485:0:Tyes-0-0-0
XCAM314565:0:Tno-0-0-0
XCAM316273:0:Tno-0-0-0
XCAM487884:0:Tno-0-0-0
XFAS160492:2:Tno-0-0-0
XFAS183190:1:Tyes-0-0-0
XFAS405440:0:Tno-0-0-0
XORY291331:0:Tno-0-0-0
XORY342109:0:Tyes-0-0-0
XORY360094:0:Tno-0-0-0
ZMOB264203:0:Tyes-0-0-0



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