CANDIDATE ID: 135

CANDIDATE ID: 135

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9973927e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.6666667e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6287 (fdrA) (b0518)
   Products of gene:
     - G6287-MONOMER (involved in protein transport; multicopy suppressor of dominant negative ftsH mutants)

- G6185 (yahF) (b0320)
   Products of gene:
     - G6185-MONOMER (predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain)

- EG10982 (sucD) (b0729)
   Products of gene:
     - SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
     - SUCCCOASYN (succinyl-CoA synthetase)
       Reactions:
        succinate + ATP + coenzyme A  =  succinyl-CoA + ADP + phosphate + H+
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-6146 (PWY-6146)
         PWY-5464 (PWY-5464)
         PWY-5392 (PWY-5392)
         PWY-5537 (PWY-5537)
         PWY-5538 (PWY-5538)
         TCA (TCA cycle)
         P42-PWY (P42-PWY)
         PWY-5690 (PWY-5690)
         PWY-5913 (PWY-5913)
         P23-PWY (P23-PWY)

- EG10981 (sucC) (b0728)
   Products of gene:
     - SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
     - SUCCCOASYN (succinyl-CoA synthetase)
       Reactions:
        succinate + ATP + coenzyme A  =  succinyl-CoA + ADP + phosphate + H+
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-6146 (PWY-6146)
         PWY-5464 (PWY-5464)
         PWY-5392 (PWY-5392)
         PWY-5537 (PWY-5537)
         PWY-5538 (PWY-5538)
         TCA (TCA cycle)
         P42-PWY (P42-PWY)
         PWY-5690 (PWY-5690)
         PWY-5913 (PWY-5913)
         P23-PWY (P23-PWY)

- EG10980 (sucB) (b0727)
   Products of gene:
     - E2O-MONOMER (SucB)
     - SUCB-LIPOATE (SucB-lipoate)
     - SUCB-S-SUCCINYLDIHYDROLIPOATE (SucB-S-succinyldihydrolipoate)
     - SUCB-DIHYDROLIPOATE (SucB-dihydrolipoate)
     - E2O (dihydrolipoyltranssuccinylase)
       Reactions:
        succinyl-CoA + dihydrolipoyltranssuccinylase N6-(dihydrolipoyl)lysine  ->  dihydrolipoyltranssuccinylase N6-(S-succinyldihydrolipoyl)lysine + coenzyme A
         In pathways
         PWY-5084 (2-ketoglutarate dehydrogenase complex)
     - 2OXOGLUTARATEDEH-CPLX (2-oxoglutarate dehydrogenase complex)
       Reactions:
        2-oxoglutarate + NAD+ + coenzyme A  ->  succinyl-CoA + CO2 + NADH
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)

- EG10979 (sucA) (b0726)
   Products of gene:
     - E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
     - E1O (2-oxoglutarate decarboxylase, thiamin-requiring)
       Reactions:
        2-oxoglutarate + dihydrolipoyltranssuccinylase N6-(lipoyl)lysine  ->  dihydrolipoyltranssuccinylase N6-(S-succinyldihydrolipoyl)lysine + CO2
         In pathways
         PWY-5084 (2-ketoglutarate dehydrogenase complex)
     - 2OXOGLUTARATEDEH-CPLX (2-oxoglutarate dehydrogenase complex)
       Reactions:
        2-oxoglutarate + NAD+ + coenzyme A  ->  succinyl-CoA + CO2 + NADH
         In pathways
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA)
         PWY-5464 (PWY-5464)
         TCA (TCA cycle)
         PWY-5690 (PWY-5690)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 308
Effective number of orgs (counting one per cluster within 468 clusters): 212

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TROS309801 ncbi Thermomicrobium roseum DSM 51596
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-36
SSP644076 Silicibacter sp. TrichCH4B5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153056
SRUB309807 ncbi Salinibacter ruber DSM 138556
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis6
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14356
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122286
SEPI176279 ncbi Staphylococcus epidermidis RP62A6
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SAUR93062 ncbi Staphylococcus aureus aureus COL6
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83256
SAUR426430 ncbi Staphylococcus aureus aureus Newman6
SAUR418127 ncbi Staphylococcus aureus aureus Mu36
SAUR367830 Staphylococcus aureus aureus USA3006
SAUR359787 ncbi Staphylococcus aureus aureus JH16
SAUR359786 ncbi Staphylococcus aureus aureus JH96
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4766
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2526
SAUR273036 ncbi Staphylococcus aureus RF1226
SAUR196620 ncbi Staphylococcus aureus aureus MW26
SAUR158879 ncbi Staphylococcus aureus aureus N3156
SAUR158878 ncbi Staphylococcus aureus aureus Mu506
SALA317655 ncbi Sphingopyxis alaskensis RB22566
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RTYP257363 ncbi Rickettsia typhi Wilmington6
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170256
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170296
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSP357808 ncbi Roseiflexus sp. RS-16
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RRIC452659 ncbi Rickettsia rickettsii Iowa6
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith6
RPRO272947 ncbi Rickettsia prowazekii Madrid E6
RPOM246200 ncbi Ruegeria pomeroyi DSS-36
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH346
RMAS416276 ncbi Rickettsia massiliae MTU56
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
RFEL315456 ncbi Rickettsia felis URRWXCal25
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1146
RCON272944 ncbi Rickettsia conorii Malish 76
RCAS383372 ncbi Roseiflexus castenholzii DSM 139416
RCAN293613 ncbi Rickettsia canadensis McKiel5
RBEL391896 ncbi Rickettsia bellii OSU 85-3895
RBEL336407 ncbi Rickettsia bellii RML369-C5
RAKA293614 ncbi Rickettsia akari Hartford6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6665
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-45
OTSU357244 ncbi Orientia tsutsugamushi Boryong5
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NSP35761 Nocardioides sp.6
NSEN222891 ncbi Neorickettsia sennetsu Miyayama6
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251966
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16226
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAR394221 ncbi Maricaulis maris MCS105
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MEXT419610 ncbi Methylobacterium extorquens PA16
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT85
LXYL281090 ncbi Leifsonia xyli xyli CTCB076
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1305
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566015
LCHO395495 ncbi Leptothrix cholodnii SP-65
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1975
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5505
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS16
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HNEP81032 Hyphomonas neptunium6
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans6
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GFOR411154 ncbi Gramella forsetii KT08036
GBET391165 ncbi Granulibacter bethesdensis CGDNIH16
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-006
FTUL418136 ncbi Francisella tularensis tularensis WY96-34186
FTUL401614 ncbi Francisella novicida U1126
FTUL393115 ncbi Francisella tularensis tularensis FSC1986
FTUL393011 ncbi Francisella tularensis holarctica OSU186
FTUL351581 Francisella tularensis holarctica FSC2006
FSP1855 Frankia sp. EAN1pec5
FRANT ncbi Francisella tularensis tularensis SCHU S46
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250176
FJOH376686 ncbi Flavobacterium johnsoniae UW1016
ESP42895 Enterobacter sp.6
ERUM302409 ncbi Ehrlichia ruminantium Gardel5
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden5
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas5
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
ECAN269484 ncbi Ehrlichia canis Jake5
DSHI398580 ncbi Dinoroseobacter shibae DFL 126
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS5
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE256
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10626
CMUR243161 ncbi Chlamydia muridarum Nigg6
CJAP155077 Cellvibrio japonicus5
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334066
CFEL264202 ncbi Chlamydophila felis Fe/C-565
CCAV227941 ncbi Chlamydophila caviae GPIC5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR227377 ncbi Coxiella burnetii RSA 4935
CBLO203907 ncbi Candidatus Blochmannia floridanus5
CAULO ncbi Caulobacter crescentus CB155
CABO218497 ncbi Chlamydophila abortus S26/35
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTRI382640 ncbi Bartonella tribocorum CIP 1054766
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1686
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.6
BQUI283165 ncbi Bartonella quintana Toulouse5
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-15
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K166
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-986
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5835
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1005
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
APHA212042 ncbi Anaplasma phagocytophilum HZ5
AMAR234826 ncbi Anaplasma marginale St. Maries5
AHYD196024 Aeromonas hydrophila dhakensis6
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3456
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAUR290340 ncbi Arthrobacter aurescens TC15


Names of the homologs of the genes in the group in each of these orgs
  G6287   G6185   EG10982   EG10981   EG10980   EG10979   
YPSE349747 YPSIP31758_2878YPSIP31758_2878YPSIP31758_2879YPSIP31758_2880YPSIP31758_2881
YPSE273123 YPTB1150YPTB1150YPTB1149YPTB1148YPTB1147
YPES386656 YPDSF_2581YPDSF_2581YPDSF_2582YPDSF_2583YPDSF_2584
YPES377628 YPN_2882YPN_2882YPN_2883YPN_2884YPN_2885
YPES360102 YPA_0594YPA_0594YPA_0593YPA_0592YPA_0591
YPES349746 YPANGOLA_A1387YPANGOLA_A1387YPANGOLA_A1386YPANGOLA_A1385YPANGOLA_A1384
YPES214092 YPO1116YPO1116YPO1115YPO1114YPO1113
YPES187410 Y3064Y3064Y3065Y3066Y3067
XORY360094 XOOORF_1538XOOORF_1538XOOORF_1537XOOORF_2960XOOORF_2959
XORY342109 XOO1477XOO1477XOO1476XOO1924XOO1925
XORY291331 XOO1594XOO1594XOO1593XOO2043XOO2044
XFAS405440 XFASM12_2118XFASM12_2118XFASM12_2117XFASM12_0888XFASM12_0889
XFAS183190 PD_1931PD_1931PD_1930PD_0759PD_0760
XFAS160492 XF2548XF2548XF2547XF1549XF1550
XCAM487884 XCC-B100_1097XCC-B100_1097XCC-B100_1096XCC-B100_2786XCC-B100_2785
XCAM316273 XCAORF_3437XCAORF_3437XCAORF_3438XCAORF_1750XCAORF_1752
XCAM314565 XC_1064XC_1064XC_1063XC_2750XC_2749
XCAM190485 XCC3093XCC3093XCC3094XCC1486XCC1487
XAXO190486 XAC3235XAC3235XAC3236XAC1534XAC1535
XAUT78245 XAUT_0491XAUT_0491XAUT_0490XAUT_0158XAUT_0156
VVUL216895 VV1_0154VV1_0154VV1_0155VV1_0156VV1_0157
VVUL196600 VV1035VV1035VV1034VV1033VV1032
VPAR223926 VP0850VP0850VP0849VP0848VP0847
VFIS312309 VF0826VF0826VF0825VF0824VF0823
VEIS391735 VEIS_2729VEIS_2729VEIS_2730VEIS_3978VEIS_3979
VCHO345073 VC0395_A1670VC0395_A1670VC0395_A1671VC0395_A1672VC0395_A1673
VCHO VC2084VC2084VC2085VC2086VC2087
TTUR377629 TERTU_2518TERTU_2518TERTU_2519TERTU_2521TERTU_2522
TROS309801 TRD_0573TRD_0573TRD_1803TRD_1804TRD_0561TRD_0562
TDEN292415 TBD_0806TBD_0806TBD_0806TBD_0805TBD_1189TBD_1188
STYP99287 STM0529STM0529STM0739STM0738STM0737STM0736
STHE292459 STH2532STH2532STH2532STH2533STH2160
SSP94122 SHEWANA3_1713SHEWANA3_1713SHEWANA3_1713SHEWANA3_1712SHEWANA3_1711SHEWANA3_1710
SSP644076 SCH4B_0431SCH4B_0431SCH4B_0433SCH4B_0428SCH4B_0429
SSP292414 TM1040_3512TM1040_3512TM1040_3514TM1040_3510TM1040_3511
SSON300269 SSO_0312SSO_0312SSO_0680SSO_0679SSO_0678SSO_0677
SSED425104 SSED_2811SSED_2811SSED_2811SSED_2812SSED_2813SSED_2814
SSAP342451 SSP1520SSP1520SSP1520SSP1521SSP1326SSP1325
SRUB309807 SRU_0670SRU_0670SRU_0670SRU_1125SRU_0811SRU_1173
SPRO399741 SPRO_1270SPRO_1270SPRO_1269SPRO_1268SPRO_1267
SPEA398579 SPEA_1791SPEA_1791SPEA_1791SPEA_1790SPEA_1789SPEA_1788
SONE211586 SO_1933SO_1933SO_1933SO_1932SO_1931SO_1930
SMEL266834 SMC02481SMC02481SMC02480SMC02483SMC02482
SMED366394 SMED_2942SMED_2942SMED_2943SMED_2940SMED_2941
SLOI323850 SHEW_1658SHEW_1658SHEW_1658SHEW_1657SHEW_1656SHEW_1655
SLAC55218 SL1157_0637SL1157_0637SL1157_0637SL1157_0636SL1157_0640SL1157_0639
SHIGELLA SUCDSUCDSUCCSUCBSUCA
SHAL458817 SHAL_2486SHAL_2486SHAL_2486SHAL_2487SHAL_2488SHAL_2489
SHAE279808 SH1667SH1667SH1667SH1668SH1493SH1492
SGLO343509 SG0879SG0879SG0878SG0877SG0876
SFUM335543 SFUM_1702SFUM_1702SFUM_1703SFUM_3548SFUM_3547
SFLE373384 SFV_0607SFV_0607SFV_0608SFV_0609SFV_0610
SFLE198214 AAN42212.1AAN42212.1AAN42213.1AAN42214.1AAN42215.1
SEPI176280 SE_0924SE_0924SE_0924SE_0923SE_1096SE_1097
SEPI176279 SERP0814SERP0814SERP0814SERP0813SERP0985SERP0986
SENT454169 SEHA_C0637SEHA_C0637SEHA_C0862SEHA_C0861SEHA_C0860SEHA_C0859
SENT321314 SCH_0568SCH_0568SCH_0743SCH_0742SCH_0741SCH_0740
SENT295319 SPA2004SPA2004SPA2005SPA2006SPA2007
SENT220341 STY0577STY0577STY0782STY0781STY0780STY0779
SENT209261 T2332T2332T2137T2138T2139T2140
SDYS300267 SDY_0268SDY_0268SDY_0667SDY_0666SDY_0665SDY_0664
SDEN318161 SDEN_2180SDEN_2180SDEN_2180SDEN_2181SDEN_2182SDEN_2183
SDEG203122 SDE_2102SDE_2102SDE_2102SDE_2103SDE_2105SDE_2106
SBOY300268 SBO_0587SBO_0587SBO_0586SBO_0585SBO_0584
SBAL402882 SHEW185_2505SHEW185_2505SHEW185_2505SHEW185_2506SHEW185_2507SHEW185_2508
SBAL399599 SBAL195_2625SBAL195_2625SBAL195_2625SBAL195_2626SBAL195_2627SBAL195_2628
SAUR93062 SACOL1263SACOL1263SACOL1263SACOL1262SACOL1448SACOL1449
SAUR93061 SAOUHSC_01218SAOUHSC_01218SAOUHSC_01218SAOUHSC_01216SAOUHSC_01416SAOUHSC_01418
SAUR426430 NWMN_1156NWMN_1156NWMN_1156NWMN_1155NWMN_1325NWMN_1326
SAUR418127 SAHV_1236SAHV_1236SAHV_1236SAHV_1235SAHV_1400SAHV_1401
SAUR367830 SAUSA300_1139SAUSA300_1139SAUSA300_1139SAUSA300_1138SAUSA300_1305SAUSA300_1306
SAUR359787 SAURJH1_1330SAURJH1_1330SAURJH1_1330SAURJH1_1329SAURJH1_1502SAURJH1_1503
SAUR359786 SAURJH9_1305SAURJH9_1305SAURJH9_1305SAURJH9_1304SAURJH9_1473SAURJH9_1474
SAUR282459 SAS1180SAS1180SAS1180SAS1179SAS1355SAS1356
SAUR282458 SAR1222SAR1222SAR1222SAR1221SAR1424SAR1425
SAUR273036 SAB1110SAB1110SAB1110SAB1109SAB1268CSAB1269C
SAUR196620 MW1129MW1129MW1129MW1128MW1302MW1303
SAUR158879 SA1089SA1089SA1089SA1088SA1244SA1245
SAUR158878 SAV1246SAV1246SAV1246SAV1245SAV1412SAV1413
SALA317655 SALA_2229SALA_2229SALA_2229SALA_0176SALA_2227SALA_2228
RXYL266117 RXYL_1275RXYL_1275RXYL_1276RXYL_2534RXYL_2535
RTYP257363 RT0419RT0419RT0419RT0420RT0170RT0171
RSPH349102 RSPH17025_0078RSPH17025_0078RSPH17025_0078RSPH17025_0079RSPH17025_0076RSPH17025_0077
RSPH349101 RSPH17029_2626RSPH17029_2626RSPH17029_2626RSPH17029_2627RSPH17029_2624RSPH17029_2625
RSPH272943 RSP_0966RSP_0966RSP_0966RSP_0967RSP_0964RSP_0965
RSP357808 ROSERS_3250ROSERS_3250ROSERS_3250ROSERS_3930ROSERS_3397ROSERS_3396
RSOL267608 RSC0555RSC0555RSC0555RSC0554RSC1270RSP1364
RRUB269796 RRU_A1212RRU_A1212RRU_A1211RRU_A1214RRU_A1213
RRIC452659 RRIOWA_0712RRIOWA_0712RRIOWA_0712RRIOWA_0713RRIOWA_0280RRIOWA_0282
RRIC392021 A1G_03360A1G_03360A1G_03360A1G_03365A1G_01290A1G_01300
RPRO272947 RP432RP432RP432RP433RP179RP180
RPOM246200 SPO_1569SPO_0346SPO_0346SPO_0347SPO_0343SPO_0344
RPAL316058 RPB_0279RPB_0279RPB_0280RPB_0277RPB_0278
RPAL316057 RPD_0539RPD_0539RPD_0536RPD_0545RPD_0544
RPAL316056 RPC_0192RPC_0192RPC_0193RPC_0190RPC_0191
RPAL316055 RPE_0298RPE_3202RPE_0298RPE_0299RPE_0296RPE_0297
RPAL258594 RPA0190RPA0190RPA0191RPA0188RPA0189
RMET266264 RMET_0470RMET_0470RMET_4358RMET_4359RMET_2049RMET_2050
RMAS416276 RMA_0613RMA_0613RMA_0613RMA_0614RMA_0238RMA_0239
RLEG216596 RL4436RL4436RL4438RL4433RL4435
RFER338969 RFER_3944RFER_3944RFER_3945RFER_2320RFER_2321
RFEL315456 RF_0664RF_0664RF_0665RF_1093RF_1092
REUT381666 H16_A0548H16_A0548H16_A0548H16_A0547H16_A2324H16_A2325
REUT264198 REUT_A0531REUT_A0531REUT_A0531REUT_A0530REUT_A2046REUT_A2047
RETL347834 RHE_CH03889RHE_CH03889RHE_CH03890RHE_CH03887RHE_CH03888
RDEN375451 RD1_1163RD1_1163RD1_1611RD1_1615RD1_1608RD1_1609
RCON272944 RC0598RC0598RC0598RC0599RC0226RC0227
RCAS383372 RCAS_3739RCAS_3739RCAS_3739RCAS_3203RCAS_1531RCAS_1532
RCAN293613 A1E_03185A1E_03185A1E_03180A1E_00935A1E_00930
RBEL391896 A1I_01110A1I_01110A1I_01105A1I_01835A1I_01830
RBEL336407 RBE_1227RBE_1227RBE_1228RBE_1098RBE_1099
RAKA293614 A1C_03215A1C_03215A1C_03215A1C_03220A1C_01295A1C_01300
PSYR223283 PSPTO_2203PSPTO_2203PSPTO_2202PSPTO_2200PSPTO_2199
PSYR205918 PSYR_2013PSYR_2013PSYR_2012PSYR_2010PSYR_2009
PSTU379731 PST_1879PST_1879PST_1878PST_1876PST_1875
PSP56811 PSYCPRWF_0270PSYCPRWF_0270PSYCPRWF_0269PSYCPRWF_0267PSYCPRWF_0266
PSP312153 PNUC_1830PNUC_1830PNUC_1830PNUC_1831PNUC_0841PNUC_0840
PSP296591 BPRO_4681BPRO_4681BPRO_4682BPRO_2623BPRO_2624
PPRO298386 PBPRA1051PBPRA1051PBPRA1051PBPRA1050PBPRA1049PBPRA1048
PNAP365044 PNAP_3952PNAP_3952PNAP_3953PNAP_1857PNAP_1856
PMUL272843 PM0281PM0281PM0280PM0278PM0277
PLUM243265 PLU1433PLU1433PLU1432PLU1431PLU1430
PHAL326442 PSHAA1644PSHAA1644PSHAA1644PSHAA1645PSHAA1646PSHAA1647
PCRY335284 PCRYO_0115PCRYO_0115PCRYO_0114PCRYO_0112PCRYO_0111
PATL342610 PATL_1802PATL_1802PATL_1801PATL_1800PATL_1799
PARC259536 PSYC_0106PSYC_0106PSYC_0105PSYC_0103PSYC_0102
OTSU357244 OTBS_0150OTBS_0150OTBS_0151OTBS_1491OTBS_1490
OIHE221109 OB1544OB1544OB1544OB1543OB1090OB1089
OCAR504832 OCAR_6555OCAR_6555OCAR_6554OCAR_4583OCAR_4582
OANT439375 OANT_0932OANT_0932OANT_0931OANT_0934OANT_0933
NWIN323098 NWI_0421NWI_0421NWI_0420NWI_0423NWI_0422
NSP35761 NOCA_1485NOCA_1485NOCA_3589NOCA_3590NOCA_2303NOCA_1737
NSEN222891 NSE_0250NSE_0250NSE_0250NSE_0251NSE_0548NSE_0578
NOCE323261 NOC_0714NOC_0714NOC_0713NOC_0112NOC_0111
NMUL323848 NMUL_A1080NMUL_A1080NMUL_A1995NMUL_A1996NMUL_A0856NMUL_A0857
NMEN374833 NMCC_0903NMCC_0903NMCC_0902NMCC_0899NMCC_0898
NMEN272831 NMC0936NMC0936NMC0935NMC0932NMC0931
NMEN122587 NMA1154NMA1154NMA1153NMA1150NMA1149
NMEN122586 NMB_0960NMB_0960NMB_0959NMB_0956NMB_0955
NHAM323097 NHAM_0543NHAM_0543NHAM_0544NHAM_0541NHAM_0542
NGON242231 NGO0912NGO0912NGO0913NGO0916NGO0917
NEUT335283 NEUT_0221NEUT_0221NEUT_0221NEUT_0606NEUT_0859NEUT_0860
NEUR228410 NE0051NE0051NE0051NE0050NE2375NE2374
NARO279238 SARO_1181SARO_1181SARO_3170SARO_1179SARO_1180
MXAN246197 MXAN_3542MXAN_3542MXAN_3542MXAN_3541MXAN_6036MXAN_6035
MSUC221988 MS1351MS1351MS1351MS1352MS1354MS1355
MSP409 M446_6557M446_6557M446_2163M446_2162M446_2166M446_2164
MSP400668 MMWYL1_2796MMWYL1_2796MMWYL1_2797MMWYL1_2799MMWYL1_2800
MSP266779 MESO_3397MESO_3397MESO_3396MESO_3399MESO_3398
MPET420662 MPE_A3256MPE_A3256MPE_A3256MPE_A0072MPE_A2012MPE_A2013
MMAR394221 MMAR10_2818MMAR10_2818MMAR10_2819MMAR10_2816MMAR10_2817
MMAG342108 AMB3959AMB3959AMB3959AMB3958AMB3962AMB3961
MLOT266835 MLR1326MLR1326MLL4303MLR1324MLL4300MLL4301
MEXT419610 MEXT_1645MEXT_1800MEXT_1645MEXT_1644MEXT_1647MEXT_1646
MCAP243233 MCA_1741MCA_1741MCA_0968MCA_0967MCA_1953MCA_1952
MAQU351348 MAQU_1158MAQU_1158MAQU_1157MAQU_1155MAQU_1154
LXYL281090 LXX19700LXX19700LXX19700LXX19720LXX10140LXX19140
LSPH444177 BSPH_2901BSPH_2901BSPH_1538BSPH_1537BSPH_2786BSPH_2785
LINT267671 LIC_12574LIC_12574LIC_12573LIC_12476LIC_12474
LINT189518 LA1101LA1101LA1102LA1222LA1224
LCHO395495 LCHO_2700LCHO_2700LCHO_2699LCHO_2883LCHO_2884
LBOR355277 LBJ_2274LBJ_2274LBJ_2273LBJ_2125LBJ_2123
LBOR355276 LBL_0833LBL_0833LBL_0834LBL_2122LBL_2120
KPNE272620 GKPORF_B5164GKPORF_B5164GKPORF_B5163GKPORF_B5162GKPORF_B5161
JSP375286 MMA_1116MMA_1116MMA_0391MMA_0390MMA_1513MMA_1512
JSP290400 JANN_0827JANN_0827JANN_0827JANN_0821JANN_0832JANN_0831
ILOI283942 IL1500IL1500IL1501IL1502IL1503
HSOM228400 HSM_1431HSM_1431HSM_1431HSM_1432HSM_1433HSM_1434
HSOM205914 HS_0956HS_0956HS_0956HS_0957HS_0958HS_0959
HNEP81032 HNE_0311HNE_0311HNE_0311HNE_0310HNE_0313HNE_0312
HINF71421 HI_1197HI_1197HI_1197HI_1196HI_1661HI_1662
HINF374930 CGSHIEE_06055CGSHIEE_06055CGSHIEE_06055CGSHIEE_06060CGSHIEE_03745CGSHIEE_03740
HINF281310 NTHI1368NTHI1368NTHI1368NTHI1367NTHI1963NTHI1964
HHAL349124 HHAL_2239HHAL_2239HHAL_2240HHAL_1085HHAL_1086
HCHE349521 HCH_04740HCH_04740HCH_04741HCH_04744HCH_04745
HARS204773 HEAR0344HEAR0344HEAR0344HEAR0343HEAR1771HEAR1772
GURA351605 GURA_3485GURA_4348GURA_3485GURA_4349GURA_1261GURA_1260
GTHE420246 GTNG_1062GTNG_1062GTNG_1061GTNG_0886GTNG_0885
GSUL243231 GSU_1059GSU_1059GSU_1059GSU_1058GSU_2448GSU_2449
GMET269799 GMET_2260GMET_2260GMET_2261GMET_2766GMET_2769
GKAU235909 GK1209GK1209GK1208GK1024GK1023
GFOR411154 GFO_1768GFO_1768GFO_1768GFO_0752GFO_3082GFO_3083
GBET391165 GBCGDNIH1_0053GBCGDNIH1_0053GBCGDNIH1_2069GBCGDNIH1_2070GBCGDNIH1_2067GBCGDNIH1_2068
FTUL458234 FTA_1640FTA_1640FTA_1640FTA_1639FTA_1889FTA_1890
FTUL418136 FTW_1562FTW_1562FTW_1562FTW_1561FTW_0153FTW_0152
FTUL401614 FTN_0593FTN_0593FTN_0593FTN_0594FTN_1634FTN_1635
FTUL393115 FTF0503CFTF0503CFTF0503CFTF0504CFTF0077FTF0076
FTUL393011 FTH_1505FTH_1505FTH_1505FTH_1504FTH_1719FTH_1720
FTUL351581 FTL_1554FTL_1554FTL_1554FTL_1553FTL_1783FTL_1784
FSP1855 FRANEAN1_5979FRANEAN1_5979FRANEAN1_5980FRANEAN1_1779FRANEAN1_0984
FRANT SUCDSUCDSUCDSUCCSUCBSUCA
FPHI484022 FPHI_0247FPHI_0247FPHI_0247FPHI_0246FPHI_0974FPHI_0973
FJOH376686 FJOH_2898FJOH_2898FJOH_2898FJOH_2162FJOH_1255FJOH_1256
ESP42895 ENT638_3144ENT638_3144ENT638_1229ENT638_1228ENT638_1227ENT638_1226
ERUM302409 ERGA_CDS_01430ERGA_CDS_01430ERGA_CDS_01440ERGA_CDS_08590ERGA_CDS_02650
ERUM254945 ERWE_CDS_01470ERWE_CDS_01470ERWE_CDS_01480ERWE_CDS_08690ERWE_CDS_02690
ELIT314225 ELI_07990ELI_07990ELI_13520ELI_08005ELI_08000
EFER585054 EFER_0419EFER_0419EFER_2384EFER_2385EFER_2386EFER_2387
ECOO157 FDRAYAHFSUCDSUCCSUCBSUCA
ECOL83334 ECS0580ECS0369ECS0754ECS0753ECS0752ECS0751
ECOL585397 ECED1_0537ECED1_0350ECED1_0698ECED1_0697ECED1_0696ECED1_0695
ECOL585057 ECIAI39_0481ECIAI39_0366ECIAI39_0686ECIAI39_0685ECIAI39_0684ECIAI39_0683
ECOL585056 ECUMN_0558ECUMN_0359ECUMN_0806ECUMN_0805ECUMN_0804ECUMN_0803
ECOL585055 EC55989_0532EC55989_0323EC55989_0712EC55989_0711EC55989_0710EC55989_0709
ECOL585035 ECS88_0517ECS88_0329ECS88_0754ECS88_0753ECS88_0752ECS88_4534
ECOL585034 ECIAI1_0520ECIAI1_0318ECIAI1_0702ECIAI1_0701ECIAI1_0700ECIAI1_0699
ECOL481805 ECOLC_3104ECOLC_3303ECOLC_2927ECOLC_2928ECOLC_2929ECOLC_2930
ECOL469008 ECBD_3140ECBD_3337ECBD_2932ECBD_2933ECBD_2934ECBD_2935
ECOL439855 ECSMS35_0563ECSMS35_0351ECSMS35_0741ECSMS35_0740ECSMS35_0739ECSMS35_0738
ECOL413997 ECB_00468ECB_00276ECB_00688ECB_00687ECB_00686ECB_00685
ECOL409438 ECSE_0543ECSE_0341ECSE_0788ECSE_0787ECSE_0786ECSE_0785
ECOL405955 APECO1_1497APECO1_1670APECO1_1350APECO1_1351APECO1_1352APECO1_1353
ECOL364106 UTI89_C0546UTI89_C0350UTI89_C0724UTI89_C0723UTI89_C0722UTI89_C4630
ECOL362663 ECP_0578ECP_0397ECP_0740ECP_0739ECP_0738ECP_4274
ECOL331111 ECE24377A_0556ECE24377A_0339ECE24377A_0755ECE24377A_0754ECE24377A_0753ECE24377A_0752
ECOL316407 ECK0511:JW0506:B0518ECK0318:JW0312:B0320ECK0717:JW0718:B0729ECK0716:JW0717:B0728ECK0715:JW0716:B0727ECK0714:JW0715:B0726
ECOL199310 C0632C0441C0806C0805C0804C5032
ECHA205920 ECH_0980ECH_0980ECH_0979ECH_1065ECH_0832
ECAR218491 ECA1364ECA1364ECA1363ECA1362ECA1361
ECAN269484 ECAJ_0147ECAJ_0147ECAJ_0148ECAJ_0857ECAJ_0255
DSHI398580 DSHI_2492DSHI_2882DSHI_2882DSHI_2878DSHI_2884DSHI_2883
DNOD246195 DNO_1313DNO_1313DNO_1313DNO_1312DNO_0331DNO_0329
DARO159087 DARO_3363DARO_3363DARO_3364DARO_2858DARO_2859
CVIO243365 CV_1076CV_1076CV_1075CV_1072CV_1071
CSUL444179 SMGWSS_154SMGWSS_154SMGWSS_154SMGWSS_187SMGWSS_186
CSP78 CAUL_0230CAUL_0230CAUL_0229CAUL_0232CAUL_0231
CSP501479 CSE45_4086CSE45_4086CSE45_4084CSE45_4089CSE45_4088
CSAL290398 CSAL_1221CSAL_1221CSAL_1220CSAL_1218CSAL_1217
CPSY167879 CPS_2222CPS_2222CPS_2222CPS_2221CPS_2220CPS_2219
CPRO264201 PC1297PC1297PC1297PC1298PC1089PC1090
CPEL335992 SAR11_0238SAR11_0238SAR11_0238SAR11_0239SAR11_0236SAR11_0237
CMUR243161 TC_0209TC_0209TC_0209TC_0208TC_0325TC_0324
CJAP155077 CJA_1510CJA_1510CJA_1508CJA_1506CJA_1505
CHUT269798 CHU_2402CHU_2402CHU_2402CHU_2240CHU_3361CHU_3362
CFEL264202 CF0230CF0230CF0229CF0586CF0587
CCAV227941 CCA_00783CCA_00783CCA_00784CCA_00421CCA_00420
CBUR434922 COXBU7E912_0598COXBU7E912_0598COXBU7E912_0597COXBU7E912_0595COXBU7E912_0594
CBUR227377 CBU_1396CBU_1396CBU_1397CBU_1398CBU_1399
CBLO203907 BFL334BFL334BFL333BFL332BFL331
CAULO CC0338CC0338CC0337CC0340CC0339
CABO218497 CAB751CAB751CAB752CAB407CAB406
BWEI315730 BCERKBAB4_3658BCERKBAB4_3658BCERKBAB4_3659BCERKBAB4_1165BCERKBAB4_1166
BVIE269482 BCEP1808_2759BCEP1808_2759BCEP1808_2759BCEP1808_2760BCEP1808_1475BCEP1808_1474
BTRI382640 BT_2677BT_2677BT_2677BT_2678BT_2675BT_2676
BTHU412694 BALH_3466BALH_3466BALH_3466BALH_3467BALH_1112BALH_1113
BTHU281309 BT9727_3576BT9727_3576BT9727_3577BT9727_1157BT9727_1158
BTHA271848 BTH_I0647BTH_I0647BTH_I0647BTH_I0646BTH_I2555BTH_I2556
BSUI470137 BSUIS_A1765BSUIS_A1765BSUIS_A1766BSUIS_A1762BSUIS_A1763
BSUI204722 BR_1925BR_1925BR_1926BR_1922BR_1923
BSUB BSU16100BSU16100BSU16100BSU16090BSU19360BSU19370
BSP376 BRADO0405BRADO0405BRADO0404BRADO0407BRADO0406
BSP36773 BCEP18194_A5975BCEP18194_A5975BCEP18194_A5975BCEP18194_A5976BCEP18194_A4650BCEP18194_A4649
BQUI283165 BQ13430BQ13430BQ13440BQ13410BQ13420
BPUM315750 BPUM_1508BPUM_1508BPUM_1508BPUM_1507BPUM_1861BPUM_1862
BPSE320373 BURPS668_0814BURPS668_0814BURPS668_0814BURPS668_0813BURPS668_1751BURPS668_1750
BPSE320372 BURPS1710B_A1030BURPS1710B_A1030BURPS1710B_A1030BURPS1710B_A1029BURPS1710B_A2084BURPS1710B_A2083
BPSE272560 BPSL0780BPSL0780BPSL0780BPSL0779BPSL1908BPSL1909
BPET94624 BPET2062BPET2062BPET2061BPET1833BPET1832
BPER257313 BP2540BP2540BP2541BP1125BP1124
BPAR257311 BPP2639BPP2639BPP2638BPP3216BPP3217
BOVI236 GBOORF1923GBOORF1923GBOORF1924GBOORF1920GBOORF1921
BMEL359391 BAB1_1925BAB1_1925BAB1_1926BAB1_1922BAB1_1923
BMEL224914 BMEI0139BMEI0139BMEI0138BMEI0141BMEI0140
BMAL320389 BMA10247_0013BMA10247_0013BMA10247_0013BMA10247_0014BMA10247_1001BMA10247_1000
BMAL320388 BMASAVP1_A2676BMASAVP1_A2676BMASAVP1_A2676BMASAVP1_A2675BMASAVP1_A1497BMASAVP1_A1498
BMAL243160 BMA_0276BMA_0276BMA_0276BMA_0275BMA_1051BMA_1052
BLIC279010 BL01099BL01099BL01284BL01285BL01453BL01452
BJAP224911 BLL0453BLL0453BLL0455BLL0451BLL0452
BHEN283166 BH16550BH16550BH16560BH16530BH16540
BHAL272558 BH2469BH2469BH2469BH2470BH2205BH2206
BCLA66692 ABC2280ABC2280ABC2280ABC2281ABC2113ABC2114
BCER572264 BCA_3934BCA_3934BCA_3935BCA_1296BCA_1297
BCER405917 BCE_3877BCE_3877BCE_3878BCE_1379BCE_1380
BCER315749 BCER98_2487BCER98_2487BCER98_2487BCER98_2488BCER98_0960BCER98_0961
BCER288681 BCE33L3594BCE33L3594BCE33L3595BCE33L1151BCE33L1152
BCER226900 BC_3833BC_3833BC_3834BC_1251BC_1252
BCEN331272 BCEN2424_2648BCEN2424_2648BCEN2424_2648BCEN2424_2649BCEN2424_1509BCEN2424_1508
BCEN331271 BCEN_2037BCEN_2037BCEN_2037BCEN_2038BCEN_1029BCEN_1028
BCAN483179 BCAN_A1969BCAN_A1969BCAN_A1970BCAN_A1966BCAN_A1967
BBRO257310 BB2082BB2082BB2081BB3668BB3669
BBAC360095 BARBAKC583_0024BARBAKC583_0024BARBAKC583_0023BARBAKC583_0026BARBAKC583_0025
BBAC264462 BD3811BD3811BD3810BD2729BD2728
BANT592021 BAA_3996BAA_3996BAA_3997BAA_1343BAA_1344
BANT568206 BAMEG_0659BAMEG_0659BAMEG_0658BAMEG_3323BAMEG_3322
BANT261594 GBAA3973GBAA3973GBAA3974GBAA1269GBAA1270
BANT260799 BAS3686BAS3686BAS3687BAS1176BAS1177
BAMY326423 RBAM_015930RBAM_015930RBAM_015920RBAM_019120RBAM_019130
BAMB398577 BAMMC406_2569BAMMC406_2569BAMMC406_2569BAMMC406_2570BAMMC406_1431BAMMC406_1430
BAMB339670 BAMB_2695BAMB_2695BAMB_2695BAMB_2696BAMB_1391BAMB_1390
BABO262698 BRUAB1_1901BRUAB1_1901BRUAB1_1902BRUAB1_1898BRUAB1_1899
ASP76114 EBA1271EBA1271EBA1272EBA6684EBA6685
ASP62928 AZO3332AZO3332AZO3333AZO1556AZO1555
ASP232721 AJS_4046AJS_4046AJS_4047AJS_1823AJS_1822
ASAL382245 ASA_2354ASA_2354ASA_2354ASA_2355ASA_2356ASA_2357
APLE434271 APJL_0478APJL_0478APJL_0479APJL_0481APJL_0482
APLE416269 APL_0451APL_0451APL_0452APL_0454APL_0455
APHA212042 APH_1053APH_1053APH_1052APH_1198APH_0863
AMAR234826 AM230AM230AM231AM1087AM405
AHYD196024 AHA_1930AHA_1930AHA_1930AHA_1929AHA_1928AHA_1927
AEHR187272 MLG_2548MLG_2548MLG_2548MLG_2547MLG_2608MLG_2609
ADEH290397 ADEH_1628ADEH_1628ADEH_1627ADEH_0782ADEH_0781
ACRY349163 ACRY_1624ACRY_1624ACRY_1625ACRY_1622ACRY_1623
ACAU438753 AZC_4014AZC_4014AZC_4015AZC_4011AZC_4013
ABOR393595 ABO_1492ABO_1492ABO_1493ABO_1495ABO_1496
ABAU360910 BAV2303BAV2303BAV2303BAV2304BAV1204BAV1203
ABAC204669 ACID345_3874ACID345_3874ACID345_3874ACID345_3875ACID345_4350ACID345_3507
AAVE397945 AAVE_4683AAVE_4683AAVE_4684AAVE_3247AAVE_3248
AAUR290340 AAUR_1045AAUR_1045AAUR_1044AAUR_1755AAUR_2635


Organism features enriched in list (features available for 287 out of the 308 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00001392792
Arrangment:Clusters 0.00073651517
Arrangment:Pairs 0.002167968112
Arrangment:Singles 0.0000970119286
Disease:None 0.00330861958
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00037271111
Endospores:No 2.688e-1068211
GC_Content_Range4:0-40 1.163e-775213
GC_Content_Range4:40-60 0.0029356125224
GC_Content_Range4:60-100 0.000867687145
GC_Content_Range7:0-30 1.591e-6847
GC_Content_Range7:30-40 0.001902667166
GC_Content_Range7:50-60 0.000015472107
GC_Content_Range7:60-70 0.000068585134
Genome_Size_Range5:0-2 8.456e-1339155
Genome_Size_Range5:2-4 0.001391981197
Genome_Size_Range5:4-6 1.525e-21143184
Genome_Size_Range9:0-1 0.0000210327
Genome_Size_Range9:1-2 2.625e-836128
Genome_Size_Range9:2-3 0.001267745120
Genome_Size_Range9:4-5 1.374e-87296
Genome_Size_Range9:5-6 4.171e-117188
Gram_Stain:Gram_Neg 2.420e-25225333
Gram_Stain:Gram_Pos 5.206e-1140150
Habitat:Host-associated 0.0043369115206
Habitat:Specialized 0.00007741353
Habitat:Terrestrial 0.00073182431
Motility:No 1.200e-845151
Motility:Yes 0.0000581154267
Optimal_temp.:- 0.0023752142257
Optimal_temp.:30-37 0.00923811418
Optimal_temp.:35-37 0.00121181213
Optimal_temp.:37 0.000408637106
Oxygen_Req:Aerobic 0.0001311111185
Oxygen_Req:Anaerobic 3.358e-256102
Oxygen_Req:Facultative 9.900e-7126201
Pathogenic_in:Animal 0.00002434866
Pathogenic_in:Human 0.0035710119213
Pathogenic_in:No 3.063e-685226
Salinity:Non-halophilic 0.001542439106
Shape:Coccus 0.00448903082
Shape:Rod 1.303e-13214347
Shape:Sphere 0.0003443219
Shape:Spiral 0.0003098734
Temp._range:Mesophilic 0.0030799245473
Temp._range:Thermophilic 0.0006913835



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 170
Effective number of orgs (counting one per cluster within 468 clusters): 136

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN243275 ncbi Treponema denticola ATCC 354050
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SGOR29390 Streptococcus gordonii Challis0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
RALB246199 Ruminococcus albus 80
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PABY272844 ncbi Pyrococcus abyssi GE50
NSP103690 ncbi Nostoc sp. PCC 71200
MTHE349307 ncbi Methanosaeta thermophila PT0
MSYN262723 ncbi Mycoplasma synoviae 530
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR368407 ncbi Methanoculleus marisnigri JR10
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MACE188937 ncbi Methanosarcina acetivorans C2A0
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-10
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CTET212717 ncbi Clostridium tetani E880
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEI306537 ncbi Corynebacterium jeikeium K4111
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCON360104 ncbi Campylobacter concisus 138260
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
AMAR329726 ncbi Acaryochloris marina MBIC110170
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
ABUT367737 ncbi Arcobacter butzleri RM40180


Names of the homologs of the genes in the group in each of these orgs
  G6287   G6185   EG10982   EG10981   EG10980   EG10979   
UURE95667
UURE95664
UPAR505682
UMET351160 RRC124
TWHI218496 TW0243
TWHI203267 TW503
TTEN273068
TSP28240
TSP1755
TPSE340099
TPET390874
TPAL243276
TMAR243274
TLET416591
TKOD69014
TERY203124
TELO197221
TDEN243275
SWOL335541
STOK273063 ST0962
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP321332
SSP321327
SSP1148
SSP1131
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SGOR29390
SELO269084
SAGA211110
SAGA208435
SAGA205921
RALB246199
PTHE370438
PRUM264731
PPEN278197
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PAST100379
PABY272844
NSP103690
MTHE349307
MSYN262723
MSED399549 MSED_1581
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR368407
MLAB410358
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAER449447
MACE188937
LWEL386043
LSAK314315
LREU557436
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967 LSEI_1307
LBRE387344
LACI272621
HPYL85963
HPYL357544
HPY
HHEP235279
HACI382638
GVIO251221
FSUC59374
FNUC190304
FNOD381764
FMAG334413
DVUL882
DSP255470
DSP216389
DRED349161
DHAF138119 DSY0983
DETH243164
DDES207559
CTET212717
CPHY357809
CPER289380
CPER195103
CPER195102
CNOV386415
CMET456442
CKLU431943 CKL_2269
CJEI306537 JK1373
CDIP257309 DIP1002
CDIF272563
CDES477974
CCON360104
CBOT536232 CLM_1874
CBOT515621
CBOT508765
CBOT498213 CLD_2922
CBOT441772 CLI_1710
CBOT441771 CLC_1659
CBOT441770 CLB_1650
CBOT36826 CBO1633
CBEI290402
CACE272562
BXEN266265
BTUR314724
BHER314723
BGAR290434
BBUR224326
BAFZ390236
AYEL322098
AVAR240292
AURANTIMONAS
AMAR329726
ALAI441768
ABUT367737


Organism features enriched in list (features available for 158 out of the 170 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 5.901e-145692
Arrangment:Singles 0.001155693286
Disease:Botulism 0.001395355
Disease:Wide_range_of_infections 4.461e-71111
Endospores:No 9.569e-782211
GC_Content_Range4:0-40 1.084e-16101213
GC_Content_Range4:40-60 0.006111149224
GC_Content_Range4:60-100 9.832e-157145
GC_Content_Range7:0-30 1.179e-103347
GC_Content_Range7:30-40 1.652e-668166
GC_Content_Range7:50-60 0.000079814107
GC_Content_Range7:60-70 5.411e-137134
Genome_Size_Range5:0-2 4.207e-1174155
Genome_Size_Range5:4-6 3.579e-1316184
Genome_Size_Range5:6-10 0.0029845547
Genome_Size_Range9:0-1 0.00005571727
Genome_Size_Range9:1-2 6.480e-757128
Genome_Size_Range9:2-3 0.000445047120
Genome_Size_Range9:4-5 0.00011261296
Genome_Size_Range9:5-6 5.445e-9488
Genome_Size_Range9:6-8 0.0020997338
Gram_Stain:Gram_Neg 2.757e-1647333
Gram_Stain:Gram_Pos 8.648e-1070150
Motility:No 0.000013861151
Optimal_temp.:30-35 0.001904367
Optimal_temp.:37 3.954e-648106
Oxygen_Req:Aerobic 1.490e-1020185
Oxygen_Req:Anaerobic 1.285e-1055102
Pathogenic_in:Animal 0.0031079966
Pathogenic_in:Swine 0.001395355
Salinity:Non-halophilic 0.000010647106
Shape:Coccus 3.240e-64082
Shape:Rod 8.493e-1160347
Shape:Sphere 1.935e-71619



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 24
Effective number of orgs (counting one per cluster within 468 clusters): 20

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS 9.320e-7645
NSEN222891 ncbi Neorickettsia sennetsu Miyayama 8.778e-62506
CMUR243161 ncbi Chlamydia muridarum Nigg 0.00001042576
RTYP257363 ncbi Rickettsia typhi Wilmington 0.00012543886
RPRO272947 ncbi Rickettsia prowazekii Madrid E 0.00012733896
RAKA293614 ncbi Rickettsia akari Hartford 0.00019094166
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith 0.00019094166
RRIC452659 ncbi Rickettsia rickettsii Iowa 0.00021424246
RCON272944 ncbi Rickettsia conorii Malish 7 0.00023644316
RMAS416276 ncbi Rickettsia massiliae MTU5 0.00027154416
CABO218497 ncbi Chlamydophila abortus S26/3 0.00113012605
CFEL264202 ncbi Chlamydophila felis Fe/C-56 0.00115202615
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE25 0.00131685736
OTSU357244 ncbi Orientia tsutsugamushi Boryong 0.00146862745
CCAV227941 ncbi Chlamydophila caviae GPIC 0.00146862745
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC1062 0.00179096036
LXYL281090 ncbi Leifsonia xyli xyli CTCB07 0.00292076546
APHA212042 ncbi Anaplasma phagocytophilum HZ 0.00360183285
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden 0.00412143375
ERUM302409 ncbi Ehrlichia ruminantium Gardel 0.00430733405
AMAR234826 ncbi Anaplasma marginale St. Maries 0.00463183455
ECAN269484 ncbi Ehrlichia canis Jake 0.00541443565
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas 0.00549053575
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.00924957926


Names of the homologs of the genes in the group in each of these orgs
  G6287   G6185   EG10982   EG10981   EG10980   EG10979   
CSUL444179 SMGWSS_154SMGWSS_154SMGWSS_154SMGWSS_187SMGWSS_186
NSEN222891 NSE_0250NSE_0250NSE_0250NSE_0251NSE_0548NSE_0578
CMUR243161 TC_0209TC_0209TC_0209TC_0208TC_0325TC_0324
RTYP257363 RT0419RT0419RT0419RT0420RT0170RT0171
RPRO272947 RP432RP432RP432RP433RP179RP180
RAKA293614 A1C_03215A1C_03215A1C_03215A1C_03220A1C_01295A1C_01300
RRIC392021 A1G_03360A1G_03360A1G_03360A1G_03365A1G_01290A1G_01300
RRIC452659 RRIOWA_0712RRIOWA_0712RRIOWA_0712RRIOWA_0713RRIOWA_0280RRIOWA_0282
RCON272944 RC0598RC0598RC0598RC0599RC0226RC0227
RMAS416276 RMA_0613RMA_0613RMA_0613RMA_0614RMA_0238RMA_0239
CABO218497 CAB751CAB751CAB752CAB407CAB406
CFEL264202 CF0230CF0230CF0229CF0586CF0587
CPRO264201 PC1297PC1297PC1297PC1298PC1089PC1090
OTSU357244 OTBS_0150OTBS_0150OTBS_0151OTBS_1491OTBS_1490
CCAV227941 CCA_00783CCA_00783CCA_00784CCA_00421CCA_00420
CPEL335992 SAR11_0238SAR11_0238SAR11_0238SAR11_0239SAR11_0236SAR11_0237
LXYL281090 LXX19700LXX19700LXX19700LXX19720LXX10140LXX19140
APHA212042 APH_1053APH_1053APH_1052APH_1198APH_0863
ERUM254945 ERWE_CDS_01470ERWE_CDS_01470ERWE_CDS_01480ERWE_CDS_08690ERWE_CDS_02690
ERUM302409 ERGA_CDS_01430ERGA_CDS_01430ERGA_CDS_01440ERGA_CDS_08590ERGA_CDS_02650
AMAR234826 AM230AM230AM231AM1087AM405
ECAN269484 ECAJ_0147ECAJ_0147ECAJ_0148ECAJ_0857ECAJ_0255
ECHA205920 ECH_0980ECH_0980ECH_0979ECH_1065ECH_0832
BTRI382640 BT_2677BT_2677BT_2677BT_2678BT_2675BT_2676


Organism features enriched in list (features available for 24 out of the 24 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Singles 0.00284675286
Disease:Pharyngitis 0.000135648
Disease:Rocky_Mountain_Spotted_Fever 0.000061633
Disease:bronchitis_and_pneumonitis 0.000135648
Endospores:No 0.00157292211
GC_Content_Range4:0-40 0.000014819213
GC_Content_Range4:60-100 0.00745741145
GC_Content_Range7:0-30 0.0014357747
Genome_Size_Range5:0-2 4.254e-920155
Genome_Size_Range9:1-2 1.907e-818128
Gram_Stain:Gram_Neg 0.004326520333
Habitat:Host-associated 9.935e-821206
Habitat:Multiple 0.00143881178
Motility:Yes 5.965e-61267
Optimal_temp.:- 0.004676317257
Pathogenic_in:Animal 0.0095344766
Pathogenic_in:Ruminant 0.004695723
Shape:Pleomorphic_coccus 0.001626922



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262690.6931
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862360.6095
PWY-5918 (heme biosynthesis I)2722270.5990
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002340.5506
PWY-1269 (CMP-KDO biosynthesis I)3252430.5291
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912250.5221
GLYCOCAT-PWY (glycogen degradation I)2462010.5214
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831640.5183
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962260.5121
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251870.5064
DAPLYSINESYN-PWY (lysine biosynthesis I)3422460.4963
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491390.4917
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911650.4914
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902190.4868
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951650.4749
PWY0-501 (lipoate biosynthesis and incorporation I)3852620.4735
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482450.4717
PWY-4041 (γ-glutamyl cycle)2792100.4653
PWY-5913 (TCA cycle variation IV)3012200.4574
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551960.4566
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181750.4525
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982640.4494
PWY-5188 (tetrapyrrole biosynthesis I)4392800.4431
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162700.4385
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911570.4357
PWY1-3 (polyhydroxybutyrate biosynthesis)1151090.4315
TYRFUMCAT-PWY (tyrosine degradation I)1841520.4295
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392330.4216
VALDEG-PWY (valine degradation I)2902070.4095
PWY-5028 (histidine degradation II)1301160.4087



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6185   EG10982   EG10981   EG10980   EG10979   
G62870.9999370.9999410.9999110.9993440.999401
G61850.999970.9999580.9993610.999382
EG109820.9999980.9997230.999741
EG109810.9997190.999713
EG109800.99999
EG10979



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PAIRWISE BLAST SCORES:

  G6287   G6185   EG10982   EG10981   EG10980   EG10979   
G62870.0f03.5e-764.1e-4---
G61853.0e-580.0f09.6e-8---
EG10982--0.0f0---
EG10981---0.0f0--
EG10980----0.0f0-
EG10979-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- SUCCCOASYN (succinyl-CoA synthetase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9999 0.9997 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
   *in cand* 0.9999 0.9997 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9997 0.9993 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9998 0.9994 G6185 (yahF) G6185-MONOMER (predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain)
   *in cand* 0.9998 0.9993 G6287 (fdrA) G6287-MONOMER (involved in protein transport; multicopy suppressor of dominant negative ftsH mutants)

- PWY-5084 (2-ketoglutarate dehydrogenase complex) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9994 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
             0.9988 0.9968 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9993 EG10980 (sucB) E2O-MONOMER (SucB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9997 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
   *in cand* 0.9999 0.9997 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
   *in cand* 0.9998 0.9994 G6185 (yahF) G6185-MONOMER (predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain)
   *in cand* 0.9998 0.9993 G6287 (fdrA) G6287-MONOMER (involved in protein transport; multicopy suppressor of dominant negative ftsH mutants)

- TCA (TCA cycle) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.667, average score: 0.801)
  Genes in pathway or complex:
             0.9986 0.9972 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.5603 0.2311 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.6743 0.4341 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.6515 0.4169 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
   *in cand* 0.9999 0.9997 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
   *in cand* 0.9999 0.9997 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
             0.9988 0.9968 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9993 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9994 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
             0.8591 0.7169 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.9902 0.9458 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.9631 0.8190 EG11325 (acnA) ACONITASE-MONOMER (aconitate hydratase 1)
             0.6467 0.6166 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.9987 0.9950 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
             0.9993 0.9985 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
             0.9994 0.9986 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
             0.9993 0.9986 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
             0.3908 0.1296 EG12069 (mqo) EG12069-MONOMER (malate:quinone oxidoreductase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 G6185 (yahF) G6185-MONOMER (predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain)
   *in cand* 0.9998 0.9993 G6287 (fdrA) G6287-MONOMER (involved in protein transport; multicopy suppressor of dominant negative ftsH mutants)

- TCA-GLYOX-BYPASS (superpathway of glyoxylate bypass and TCA) (degree of match pw to cand: 0.200, degree of match cand to pw: 0.667, average score: 0.748)
  Genes in pathway or complex:
             0.3794 0.0878 EG10022 (aceA) ISOCIT-LYASE-MONOMER (isocitrate lyase monomer)
             0.3863 0.0886 EG10023 (aceB) MALATE-SYNTHASE (malate synthase A)
             0.3908 0.1296 EG12069 (mqo) EG12069-MONOMER (malate:quinone oxidoreductase)
             0.9987 0.9950 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
             0.9993 0.9985 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
             0.9994 0.9986 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
             0.9993 0.9986 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
             0.6467 0.6166 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.9631 0.8190 EG11325 (acnA) ACONITASE-MONOMER (aconitate hydratase 1)
             0.9902 0.9458 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.8591 0.7169 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.9988 0.9968 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9993 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9994 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
   *in cand* 0.9999 0.9997 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
   *in cand* 0.9999 0.9997 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
             0.6515 0.4169 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
             0.6743 0.4341 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.5603 0.2311 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.9986 0.9972 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 G6185 (yahF) G6185-MONOMER (predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain)
   *in cand* 0.9998 0.9993 G6287 (fdrA) G6287-MONOMER (involved in protein transport; multicopy suppressor of dominant negative ftsH mutants)

- GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass) (degree of match pw to cand: 0.098, degree of match cand to pw: 0.667, average score: 0.600)
  Genes in pathway or complex:
             0.9986 0.9972 EG10576 (mdh) MALATE-DEHASE-MONOMER (Mdh)
             0.5603 0.2311 EG10358 (fumC) FUMC-MONOMER (fumarase C monomer)
             0.6743 0.4341 EG10357 (fumB) FUMB-MONOMER (fumarase B monomer)
             0.6515 0.4169 EG10356 (fumA) FUMA-MONOMER (fumarase A monomer)
   *in cand* 0.9999 0.9997 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
   *in cand* 0.9999 0.9997 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
   *in cand* 0.9997 0.9993 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9994 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
             0.8591 0.7169 EG10489 (icd) ISOCITDEH-SUBUNIT (Icd)
             0.9902 0.9458 EG10402 (gltA) CITSYN-MONOMER (citrate synthase monomer)
             0.9631 0.8190 EG11325 (acnA) ACONITASE-MONOMER (aconitate hydratase 1)
             0.6467 0.6166 EG12316 (acnB) ACONITATEDEHYDRB-MONOMER (bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase)
             0.9987 0.9950 EG10934 (sdhD) SDH-MEMB2 (succinate dehydrogenase membrane protein)
             0.9993 0.9985 EG10933 (sdhC) SDH-MEMB1 (succinate dehydrogenase membrane protein)
             0.9994 0.9986 EG10932 (sdhB) SDH-FE-S (succinate dehydrogenase iron-sulfur protein)
             0.9993 0.9986 EG10931 (sdhA) SDH-FLAVO (succinate dehydrogenase flavoprotein)
             0.3908 0.1296 EG12069 (mqo) EG12069-MONOMER (malate:quinone oxidoreductase)
             0.3863 0.0886 EG10023 (aceB) MALATE-SYNTHASE (malate synthase A)
             0.3794 0.0878 EG10022 (aceA) ISOCIT-LYASE-MONOMER (isocitrate lyase monomer)
             0.0953 0.0036 EG11245 (yggF) EG11245-MONOMER (fructose-1,6-bisphosphatase)
             0.9275 0.7308 EG11239 (ybhA) EG11239-MONOMER (pyridoxal phosphatase / fructose 1,6-bisphosphatase)
             0.1243 0.0036 EG11517 (glpX) EG11517-MONOMER (fructose 1,6-bisphosphatase II)
             0.4786 0.2331 EG10283 (fbp) F16B-MONOMER (fructose-1,6-bisphosphatase monomer)
             0.8625 0.7768 EG10759 (ppsA) PEPSYNTH-MONOMER (phosphoenolpyruvate synthetase)
             0.5603 0.3203 EG10702 (pgi) PGLUCISOM (Pgi)
             0.4677 0.1073 EG10699 (pfkA) 6PFK-1-MONOMER (6-phosphofructokinase-1 monomer)
             0.7055 0.4456 EG10700 (pfkB) 6PFK-2-MONOMER (6-phosphofructokinase-2 monomer)
             0.3822 0.2548 G7129 (fbaB) FRUCBISALD-CLASSI-MONOMER (fructose bisphosphate aldolase monomer)
             0.3236 0.0300 EG10282 (fbaA) FRUCTBISALD-CLASSII-MONOMER (fructose bisphosphate aldolase monomer)
             0.2281 0.0029 EG11015 (tpiA) TPI-MONOMER (triose phosphate isomerase monomer)
             0.5773 0.1503 EG10367 (gapA) GAPDH-A-MONOMER (glyceraldehyde 3-phosphate dehydrogenase-A monomer)
             0.5192 0.0012 EG10703 (pgk) PGK (phosphoglycerate kinase)
             0.0932 0.0040 EG12296 (gpmM) PGMI-MONOMER (phosphoglycerate mutase, cofactor independent)
             0.6457 0.1488 EG12164 (ytjC) PGAM2-MONOMER (phosphoglycerate mutase 2)
             0.9749 0.9284 EG11699 (gpmA) GPMA-MONOMER (phosphoglyceromutase 1 monomer)
             0.0867 0.0021 EG10258 (eno) ENOLASE-MONOMER (Eno)
             0.7467 0.2256 EG10804 (pykF) PKI-MONOMER (pyruvate kinase I monomer)
             0.8975 0.5884 EG10803 (pykA) PKII-MONOMER (pyruvate kinase II monomer)
             0.9988 0.9968 EG10543 (lpd) E3-MONOMER (E3 monomer)
             0.9915 0.9649 EG10025 (aceF) ACEF-LIPOATE (AceF-lipoate)
             0.3830 0.0031 EG10024 (aceE) E1P-MONOMER (subunit of E1p component of pyruvate dehydrogenase complex)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 G6185 (yahF) G6185-MONOMER (predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain)
   *in cand* 0.9998 0.9993 G6287 (fdrA) G6287-MONOMER (involved in protein transport; multicopy suppressor of dominant negative ftsH mutants)

- 2OXOGLUTARATEDEH-CPLX (2-oxoglutarate dehydrogenase complex) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
             0.9988 0.9968 EG10543 (lpd) E3-MONOMER (E3 monomer)
   *in cand* 0.9997 0.9993 EG10980 (sucB) E2O-MONOMER (SucB)
   *in cand* 0.9997 0.9994 EG10979 (sucA) E1O-MONOMER (subunit of E1(0) component of 2-oxoglutarate dehydrogenase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9997 EG10981 (sucC) SUCCCOASYN-BETA (succinyl-CoA synthetase, β subunit)
   *in cand* 0.9999 0.9997 EG10982 (sucD) SUCCCOASYN-ALPHA (succinyl-CoA synthetase, α subunit)
   *in cand* 0.9998 0.9994 G6185 (yahF) G6185-MONOMER (predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain)
   *in cand* 0.9998 0.9993 G6287 (fdrA) G6287-MONOMER (involved in protein transport; multicopy suppressor of dominant negative ftsH mutants)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10979 EG10980 EG10981 EG10982 (centered at EG10981)
G6185 (centered at G6185)
G6287 (centered at G6287)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6287   G6185   EG10982   EG10981   EG10980   EG10979   
277/623330/623397/623395/623392/623385/623
AAEO224324:0:Tyes1110--
AAUR290340:2:Tyes-1106981549
AAVE397945:0:Tyes-14091409141001
ABAC204669:0:Tyes3693693693708540
ABAU360910:0:Tyes110511051105110610
ABOR393595:0:Tyes-00134
ACAU438753:0:Tyes3-3402
ACEL351607:0:Tyes----3490
ACRY349163:8:Tyes2-2301
ADEH290397:0:Tyes-85985985810
AEHR187272:0:Tyes11106162
AFER243159:0:Tyes-002--
AFUL224325:0:Tyes006361--
AHYD196024:0:Tyes333210
AMAR234826:0:Tyes0-01628131
AMET293826:0:Tyes20120110--
ANAE240017:0:Tyes-434-4350471
AORE350688:0:Tyes23523510--
APER272557:0:Tyes000---
APHA212042:0:Tyes177-1771763090
APLE416269:0:Tyes0-0134
APLE434271:0:Tno0-0134
ASAL382245:5:Tyes000123
ASP1667:3:Tyes--108041844
ASP232721:2:Tyes-21792179218010
ASP62928:0:Tyes-17991799180010
ASP62977:0:Tyes--0134
ASP76114:2:Tyes-00131863187
BABO262698:1:Tno3-3401
BAMB339670:3:Tno133913391339134010
BAMB398577:3:Tno115711571157115810
BAMY326423:0:Tyes-110320321
BANT260799:0:Tno2491-2491249201
BANT261594:2:Tno2462-2462246301
BANT568206:2:Tyes1-1026412640
BANT592021:2:Tno2628-2628262901
BAPH198804:0:Tyes----10
BAPH372461:0:Tyes----10
BBAC264462:0:Tyes-99999999810
BBAC360095:0:Tyes1-1032
BBRO257310:0:Tyes-11015931594
BCAN483179:1:Tno3-3401
BCEN331271:2:Tno101810181018101910
BCEN331272:3:Tyes113811381138113910
BCER226900:1:Tyes2522-2522252301
BCER288681:0:Tno2427-2427242801
BCER315749:1:Tyes143214321432143301
BCER405917:1:Tyes2346-2346234701
BCER572264:1:Tno2609-2609261001
BCIC186490:0:Tyes--10--
BCLA66692:0:Tyes16716716716801
BFRA272559:1:Tyes0001--
BFRA295405:0:Tno0001--
BHAL272558:0:Tyes26426426426501
BHEN283166:0:Tyes2-2301
BJAP224911:0:Fyes2-2401
BLIC279010:0:Tyes0067567410931094
BLON206672:0:Tyes00----
BMAL243160:1:Tno1110686687
BMAL320388:1:Tno114811481148114701
BMAL320389:1:Tyes0001967966
BMEL224914:1:Tno1-1032
BMEL359391:1:Tno2-2301
BOVI236:1:Tyes3-3401
BPAR257311:0:Tno-110526527
BPER257313:0:Tyes-12861286128710
BPET94624:0:Tyes-23223223110
BPSE272560:1:Tyes111011271128
BPSE320372:1:Tno111010421041
BPSE320373:1:Tno1110908907
BPUM315750:0:Tyes1110343344
BQUI283165:0:Tyes2-2301
BSP107806:2:Tyes----10
BSP36773:2:Tyes135213521352135310
BSP376:0:Tyes1-1032
BSUB:0:Tyes1110341342
BSUI204722:1:Tyes3-3401
BSUI470137:1:Tno3-3401
BTHA271848:1:Tno111018721873
BTHE226186:0:Tyes0001--
BTHU281309:1:Tno2404-2404240501
BTHU412694:1:Tno223322332233223401
BTRI382640:1:Tyes222301
BVIE269482:7:Tyes126812681268126910
BWEI315730:4:Tyes2417-2417241801
CABO218497:0:Tyes-34534534610
CAULO:0:Tyes1-1032
CBLO203907:0:Tyes-33210
CBLO291272:0:Tno--3210
CBOT36826:1:Tno----0-
CBOT441770:0:Tyes----0-
CBOT441771:0:Tno----0-
CBOT441772:1:Tno----0-
CBOT498213:1:Tno----0-
CBOT536232:0:Tno----0-
CBUR227377:1:Tyes-00123
CBUR360115:1:Tno--0123
CBUR434922:2:Tno-44310
CCAV227941:1:Tyes-35935936010
CCHL340177:0:Tyes1351351350--
CCUR360105:0:Tyes0001--
CDIP257309:0:Tyes-----0
CEFF196164:0:Fyes12961296--9280
CFEL264202:1:Tyes-110373374
CFET360106:0:Tyes0001--
CGLU196627:0:Tyes1416---10440
CHOM360107:1:Tyes1110--
CHUT269798:0:Tyes155155155010951096
CHYD246194:0:Tyes00----
CJAP155077:0:Tyes-44310
CJEI306537:0:Tyes-----0
CJEJ192222:0:Tyes1-10--
CJEJ195099:0:Tno1-10--
CJEJ354242:2:Tyes1-10--
CJEJ360109:0:Tyes0-01--
CJEJ407148:0:Tno1-10--
CKLU431943:1:Tyes----0-
CKOR374847:0:Tyes00----
CMAQ397948:0:Tyes00----
CMIC31964:2:Tyes----0419
CMIC443906:2:Tyes----3310
CMUR243161:1:Tyes1110117116
CPEL335992:0:Tyes222301
CPNE115711:1:Tyes--49950010
CPNE115713:0:Tno--61561401
CPNE138677:0:Tno--61761601
CPNE182082:0:Tno--64364201
CPRO264201:0:Fyes21021021021101
CPSY167879:0:Tyes333210
CRUT413404:0:Tyes0001--
CSAL290398:0:Tyes-44310
CSP501479:6:Fyes-22054
CSP78:2:Tyes1-1032
CSUL444179:0:Tyes000-3231
CTEP194439:0:Tyes000111--
CTRA471472:0:Tyes--10115114
CTRA471473:0:Tno--10115114
CVES412965:0:Tyes-001--
CVIO243365:0:Tyes-55410
DARO159087:0:Tyes-50850850901
DGEO319795:1:Tyes--946-01
DHAF138119:0:Tyes-0----
DNOD246195:0:Tyes93993993993810
DOLE96561:0:Tyes--01--
DPSY177439:2:Tyes2-20--
DRAD243230:3:Tyes--1148-0196
DSHI398580:5:Tyes0391391387393392
ECAN269484:0:Tyes-001717111
ECAR218491:0:Tyes-33210
ECHA205920:0:Tyes-1391391382220
ECOL199310:0:Tno18703573563554505
ECOL316407:0:Tno1940403402401400
ECOL331111:6:Tno2130397396395394
ECOL362663:0:Tno17703403393383861
ECOL364106:1:Tno19603743733724260
ECOL405955:2:Tyes1740329328327326
ECOL409438:6:Tyes2020455454453452
ECOL413997:0:Tno1910411410409408
ECOL439855:4:Tno2110380379378377
ECOL469008:0:Tno2013990123
ECOL481805:0:Tno1823800123
ECOL585034:0:Tno2040386385384383
ECOL585035:0:Tno18704154144134059
ECOL585055:0:Tno2060387386385384
ECOL585056:2:Tno2020453452451450
ECOL585057:0:Tno1160325324323322
ECOL585397:0:Tno1880343342341340
ECOL83334:0:Tno2120394393392391
ECOLI:0:Tno1980408407406405
ECOO157:0:Tno2130399398397396
EFAE226185:3:Tyes02463----
EFER585054:1:Tyes001944194519461947
ELIT314225:0:Tyes0-0111832
ERUM254945:0:Tyes-001750130
ERUM302409:0:Tno-001744130
ESP42895:1:Tyes193119313210
FALN326424:0:Tyes11-0-4710
FJOH376686:0:Tyes16721672167293401
FPHI484022:1:Tyes1110754753
FRANT:0:Tno40440440440510
FSP106370:0:Tyes1--0-3088
FSP1855:0:Tyes49144914-49157880
FTUL351581:0:Tno1110208209
FTUL393011:0:Tno1110177178
FTUL393115:0:Tyes39539539539610
FTUL401614:0:Tyes000110321033
FTUL418136:0:Tno117611761176117510
FTUL458234:0:Tno1110184185
GBET391165:0:Tyes002016201720142015
GFOR411154:0:Tyes101610161016023302331
GKAU235909:1:Tyes186-18618510
GMET269799:1:Tyes-001500503
GOXY290633:5:Tyes----1910
GSUL243231:0:Tyes111013851386
GTHE420246:1:Tyes175-17517410
GURA351605:0:Tyes220630652206306610
HARS204773:0:Tyes111013461347
HAUR316274:2:Tyes-1993199319960-
HBUT415426:0:Tyes000---
HCHE349521:0:Tyes-00134
HDUC233412:0:Tyes----01
HHAL349124:0:Tyes1160-1160116101
HINF281310:0:Tyes1110529530
HINF374930:0:Tyes39439439439510
HINF71421:0:Tno1110457458
HMAR272569:8:Tyes1-10--
HMOD498761:0:Tyes00----
HMUK485914:1:Tyes0001--
HNEP81032:0:Tyes111032
HSAL478009:4:Tyes1110--
HSOM205914:1:Tyes000123
HSOM228400:0:Tno000123
HSP64091:2:Tno1110--
HWAL362976:1:Tyes0001--
IHOS453591:0:Tyes00-1--
ILOI283942:0:Tyes-00123
JSP290400:1:Tyes66601110
JSP375286:0:Tyes7407401011491148
KPNE272620:2:Tyes-33210
KRAD266940:2:Fyes---176625020
LBIF355278:2:Tyes--97497320
LBIF456481:2:Tno--99999820
LBOR355276:1:Tyes-00111591157
LBOR355277:1:Tno-13213213120
LCAS321967:1:Tyes----0-
LCHO395495:0:Tyes-110186187
LINT189518:1:Tyes-001124126
LINT267671:1:Tno-99999820
LPNE272624:0:Tno--3210
LPNE297245:1:Fno--3210
LPNE297246:1:Fyes--3210
LPNE400673:0:Tno--0123
LSPH444177:1:Tyes129312931011831182
LXYL281090:0:Tyes8228228228230775
MABS561007:1:Tyes-1-0897336
MAEO419665:0:Tyes000---
MAQU351348:2:Tyes-44310
MAVI243243:0:Tyes-00--307
MBOV233413:0:Tno----9660
MBOV410289:0:Tno----9280
MCAP243233:0:Tyes73373310939938
MEXT419610:0:Tyes11571032
MFLA265072:0:Tyes0001--
MGIL350054:3:Tyes----7300
MJAN243232:2:Tyes000---
MKAN190192:0:Tyes00----
MLEP272631:0:Tyes----0155
MLOT266835:2:Tyes112292022892290
MMAG342108:0:Tyes111043
MMAR267377:0:Tyes000---
MMAR394221:0:Tyes2-2301
MMAR402880:1:Tyes000---
MMAR426368:0:Tyes000---
MMAR444158:0:Tyes0-0---
MPET420662:1:Tyes317731773177019361937
MSED399549:0:Tyes-0----
MSME246196:0:Tyes-1224--0752
MSP164756:1:Tno-1025--0669
MSP164757:0:Tno-1386--0674
MSP189918:2:Tyes-1051--0684
MSP266779:3:Tyes1-1032
MSP400668:0:Tyes-00134
MSP409:2:Tyes425642561042
MSTA339860:0:Tyes00----
MSUC221988:0:Tyes000134
MTBCDC:0:Tno----10210
MTBRV:0:Tno----9720
MTHE187420:0:Tyes000---
MTHE264732:0:Tyes00----
MTUB336982:0:Tno----9570
MTUB419947:0:Tyes----10050
MVAN350058:0:Tyes----0893
MXAN246197:0:Tyes111024192418
NARO279238:0:Tyes2-2202901
NEUR228410:0:Tyes111023672366
NEUT335283:2:Tyes000383631632
NFAR247156:2:Tyes-33313331-03032
NGON242231:0:Tyes-00145
NHAM323097:2:Tyes2-2301
NMEN122586:0:Tno-55410
NMEN122587:0:Tyes-55410
NMEN272831:0:Tno-55410
NMEN374833:0:Tno-55410
NMUL323848:3:Tyes2242241131113201
NOCE323261:1:Tyes-59059058910
NPHA348780:2:Tyes0001--
NSEN222891:0:Tyes0001287315
NSP35761:1:Tyes0021152116820253
NSP387092:0:Tyes1110--
NWIN323098:0:Tyes1-1032
OANT439375:5:Tyes1-1032
OCAR504832:0:Tyes1974-1974197310
OIHE221109:0:Tyes45445445445310
OTSU357244:0:Fyes0-01759758
PACN267747:0:Tyes10601060--0568
PAER178306:0:Tyes11-0--
PAER208963:0:Tyes--0134
PAER208964:0:Tno--4310
PARC259536:0:Tyes-44310
PARS340102:0:Tyes11-0--
PATL342610:0:Tyes-33210
PCAR338963:0:Tyes--0127192718
PCRY335284:1:Tyes-44310
PENT384676:0:Tyes--0134
PFLU205922:0:Tyes--4310
PFLU216595:1:Tyes--4310
PFLU220664:0:Tyes--4310
PHAL326442:1:Tyes000123
PING357804:0:Tyes--0123
PINT246198:1:Tyes0001--
PISL384616:0:Tyes00----
PLUM243265:0:Fyes-33210
PLUT319225:0:Tyes1217121712170--
PMEN399739:0:Tyes--0134
PMUL272843:1:Tyes-44310
PNAP365044:8:Tyes-21072107210810
PPRO298386:2:Tyes333210
PPUT160488:0:Tno--0134
PPUT351746:0:Tyes--4310
PPUT76869:0:Tno--0134
PSP117:0:Tyes--828827700
PSP296591:2:Tyes-20452045204601
PSP312153:0:Tyes100410041004100510
PSP56811:2:Tyes-44310
PSTU379731:0:Tyes-44310
PSYR205918:0:Tyes-44310
PSYR223283:2:Tyes-44310
PTOR263820:0:Tyes00----
RAKA293614:0:Fyes35835835835901
RBEL336407:0:Tyes-13313313401
RBEL391896:0:Fno-110139138
RCAN293613:0:Fyes-45445445310
RCAS383372:0:Tyes218121812181165501
RCON272944:0:Tno37837837837901
RDEN375451:4:Tyes00427431424425
RETL347834:5:Tyes2-2301
REUT264198:3:Tyes111015131514
REUT381666:2:Tyes111017241725
RFEL315456:2:Tyes-001442441
RFER338969:1:Tyes-16241624162501
RLEG216596:6:Tyes3-3502
RMAS416276:1:Tyes27727727727801
RMET266264:1:Tyes--01--
RMET266264:2:Tyes00--15721573
RPAL258594:0:Tyes2-2301
RPAL316055:0:Tyes228822301
RPAL316056:0:Tyes2-2301
RPAL316057:0:Tyes3-3098
RPAL316058:0:Tyes2-2301
RPOM246200:1:Tyes120433401
RPRO272947:0:Tyes24924924925001
RRIC392021:0:Fno37137137137202
RRIC452659:0:Tyes38838838838902
RRUB269796:1:Tyes1-1032
RSAL288705:0:Tyes---0-1033
RSOL267608:0:Tyes-----0
RSOL267608:1:Tyes1110735-
RSP101510:3:Fyes--4410-04848
RSP357808:0:Tyes000679146145
RSPH272943:4:Tyes222301
RSPH349101:2:Tno222301
RSPH349102:5:Tyes222301
RTYP257363:0:Tno24924924925001
RXYL266117:0:Tyes0-0112461247
SACI330779:0:Tyes00----
SACI56780:0:Tyes-110--
SALA317655:1:Tyes207520752075020732074
SARE391037:0:Tyes---6430517
SAUR158878:1:Tno1110167168
SAUR158879:1:Tno1110164165
SAUR196620:0:Tno1110174175
SAUR273036:0:Tno1110156157
SAUR282458:0:Tno1110197198
SAUR282459:0:Tno1110172173
SAUR359786:1:Tno1110164165
SAUR359787:1:Tno1110169170
SAUR367830:3:Tno1110167168
SAUR418127:0:Tyes1110165166
SAUR426430:0:Tno1110170171
SAUR93061:0:Fno1110190191
SAUR93062:1:Tno1110185186
SAVE227882:1:Fyes-482-48331080
SBAL399599:3:Tyes000123
SBAL402882:1:Tno000123
SBOY300268:1:Tyes-33210
SCO:2:Fyes44414441--03143
SDEG203122:0:Tyes000134
SDEN318161:0:Tyes000123
SDYS300267:1:Tyes00378377376375
SENT209261:0:Tno1821820123
SENT220341:0:Tno00181180179178
SENT295319:0:Tno-00123
SENT321314:2:Tno00183182181180
SENT454169:2:Tno00215214213212
SEPI176279:1:Tyes1110168169
SEPI176280:0:Tno1110173174
SERY405948:0:Tyes---489904614
SFLE198214:0:Tyes-00123
SFLE373384:0:Tno-00123
SFUM335543:0:Tyes-00118291828
SGLO343509:3:Tyes-33210
SHAE279808:0:Tyes17517517517610
SHAL458817:0:Tyes000123
SHIGELLA:0:Tno-00123
SLAC55218:1:Fyes111043
SLOI323850:0:Tyes333210
SMAR399550:0:Tyes00----
SMED366394:3:Tyes2-2301
SMEL266834:2:Tyes2-2301
SONE211586:1:Tyes333210
SPEA398579:0:Tno333210
SPRO399741:1:Tyes-33210
SRUB309807:1:Tyes000445139492
SSAP342451:2:Tyes19519519519610
SSED425104:0:Tyes000123
SSOL273057:0:Tyes00----
SSON300269:1:Tyes00354353352351
SSP292414:1:Tyes-22401
SSP387093:0:Tyes1110--
SSP644076:2:Fyes-33501
SSP94122:1:Tyes333210
STHE292459:0:Tyes3783783783790-
STOK273063:0:Tyes-0----
STRO369723:0:Tyes-502--0378
STYP99287:1:Tyes00208207206205
TACI273075:0:Tyes00----
TCRU317025:0:Tyes--01--
TDEN292415:0:Tyes1110391390
TDEN326298:0:Tyes1110--
TFUS269800:0:Tyes--203220334320
TPEN368408:1:Tyes00----
TROS309801:1:Tyes12121195119601
TTHE262724:1:Tyes--0115591558
TTHE300852:2:Tyes--26026101
TTUR377629:0:Tyes-00134
TVOL273116:0:Tyes00----
TWHI203267:0:Tyes----0-
TWHI218496:0:Tno----0-
UMET351160:0:Tyes----0-
VCHO:0:Tyes-00123
VCHO345073:1:Tno-00123
VEIS391735:1:Tyes-00112331234
VFIS312309:2:Tyes-33210
VPAR223926:1:Tyes-33210
VVUL196600:2:Tyes-33210
VVUL216895:1:Tno-00123
WPIP80849:0:Tyes--9949960687
WPIP955:0:Tyes--6036040698
WSUC273121:0:Tyes1110--
XAUT78245:1:Tyes337-33733620
XAXO190486:0:Tyes-17011701170201
XCAM190485:0:Tyes-16071607160801
XCAM314565:0:Tno-11016911690
XCAM316273:0:Tno-16581658165901
XCAM487884:0:Tno-11017111710
XFAS160492:2:Tno-99599599401
XFAS183190:1:Tyes-11511151115001
XFAS405440:0:Tno-11231123112201
XORY291331:0:Tno-110452453
XORY342109:0:Tyes-110450451
XORY360094:0:Tno-22027642762
YENT393305:1:Tyes--0123
YPES187410:5:Tno-00123
YPES214092:3:Tno-33210
YPES349746:2:Tno-33210
YPES360102:3:Tyes-33210
YPES377628:2:Tno-00123
YPES386656:2:Tno-00123
YPSE273123:2:Tno-33210
YPSE349747:2:Tno-00123
ZMOB264203:0:Tyes--0939--



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