CANDIDATE ID: 146

CANDIDATE ID: 146

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9985653e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.6666670e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10541 (livM) (b3456)
   Products of gene:
     - LIVM-MONOMER (LivM)
     - ABC-304-CPLX (leucine ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
     - ABC-15-CPLX (branched chain amino acids ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
        ATP + L-valine[periplasmic space] + H2O  ->  ADP + phosphate + L-valine[cytosol]
        ATP + L-isoleucine[periplasmic space] + H2O  ->  ADP + phosphate + L-isoleucine[cytosol]

- EG10540 (livK) (b3458)
   Products of gene:
     - LIVK-MONOMER (LivK, leucine binding protein of the high-affinity branched-chain amino acid transport system)
     - ABC-304-CPLX (leucine ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]

- EG10539 (livJ) (b3460)
   Products of gene:
     - LIVJ-MONOMER (LivJ)
     - ABC-15-CPLX (branched chain amino acids ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
        ATP + L-valine[periplasmic space] + H2O  ->  ADP + phosphate + L-valine[cytosol]
        ATP + L-isoleucine[periplasmic space] + H2O  ->  ADP + phosphate + L-isoleucine[cytosol]

- EG10538 (livH) (b3457)
   Products of gene:
     - LIVH-MONOMER (LivH)
     - ABC-304-CPLX (leucine ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
     - ABC-15-CPLX (branched chain amino acids ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
        ATP + L-valine[periplasmic space] + H2O  ->  ADP + phosphate + L-valine[cytosol]
        ATP + L-isoleucine[periplasmic space] + H2O  ->  ADP + phosphate + L-isoleucine[cytosol]

- EG10537 (livG) (b3455)
   Products of gene:
     - LIVG-MONOMER (LivG)
     - ABC-304-CPLX (leucine ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
     - ABC-15-CPLX (branched chain amino acids ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
        ATP + L-valine[periplasmic space] + H2O  ->  ADP + phosphate + L-valine[cytosol]
        ATP + L-isoleucine[periplasmic space] + H2O  ->  ADP + phosphate + L-isoleucine[cytosol]

- EG10536 (livF) (b3454)
   Products of gene:
     - LIVF-MONOMER (LivF)
     - ABC-15-CPLX (branched chain amino acids ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]
        ATP + L-valine[periplasmic space] + H2O  ->  ADP + phosphate + L-valine[cytosol]
        ATP + L-isoleucine[periplasmic space] + H2O  ->  ADP + phosphate + L-isoleucine[cytosol]
     - ABC-304-CPLX (leucine ABC transporter)
       Reactions:
        ATP + L-leucine[periplasmic space] + H2O  ->  ADP + phosphate + L-leucine[cytosol]



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 207
Effective number of orgs (counting one per cluster within 468 clusters): 147

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XAUT78245 ncbi Xanthobacter autotrophicus Py26
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
TWHI218496 ncbi Tropheryma whipplei TW08/275
TWHI203267 ncbi Tropheryma whipplei Twist5
TTHE300852 ncbi Thermus thermophilus HB85
TTHE262724 ncbi Thermus thermophilus HB276
TSP28240 Thermotoga sp.5
TPET390874 ncbi Thermotoga petrophila RKU-15
TMAR243274 ncbi Thermotoga maritima MSB85
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STRO369723 ncbi Salinispora tropica CNB-4406
STHE322159 ncbi Streptococcus thermophilus LMD-95
STHE299768 ncbi Streptococcus thermophilus CNRZ10665
STHE264199 ncbi Streptococcus thermophilus LMG 183115
SSUI391296 ncbi Streptococcus suis 98HAH336
SSUI391295 ncbi Streptococcus suis 05ZYH336
SSON300269 ncbi Shigella sonnei Ss0466
SPRO399741 ncbi Serratia proteamaculans 5686
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-145
SPNE171101 ncbi Streptococcus pneumoniae R65
SPNE170187 ncbi Streptococcus pneumoniae G545
SPNE1313 Streptococcus pneumoniae5
SMUT210007 ncbi Streptococcus mutans UA1596
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SGOR29390 Streptococcus gordonii Challis5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SCO ncbi Streptomyces coelicolor A3(2)6
SBOY300268 ncbi Shigella boydii Sb2276
SAVE227882 ncbi Streptomyces avermitilis MA-46806
SARE391037 ncbi Salinispora arenicola CNS-2056
SACI56780 ncbi Syntrophus aciditrophicus SB6
RSP357808 ncbi Roseiflexus sp. RS-16
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 426
RCAS383372 ncbi Roseiflexus castenholzii DSM 139416
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OCAR504832 ncbi Oligotropha carboxidovorans OM56
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NHAM323097 ncbi Nitrobacter hamburgensis X146
NFAR247156 ncbi Nocardia farcinica IFM 101526
MXAN246197 ncbi Myxococcus xanthus DK 16226
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC16
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MEXT419610 ncbi Methylobacterium extorquens PA15
MAQU351348 ncbi Marinobacter aquaeolei VT86
MABS561007 ncbi Mycobacterium abscessus ATCC 199776
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LPLA220668 ncbi Lactobacillus plantarum WCFS16
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82935
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-006
LCHO395495 ncbi Leptothrix cholodnii SP-66
LCAS321967 ncbi Lactobacillus casei ATCC 3346
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237796
HARS204773 ncbi Herminiimonas arsenicoxydans6
GVIO251221 ncbi Gloeobacter violaceus PCC 74216
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-26
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
FSP1855 Frankia sp. EAN1pec5
FSP106370 ncbi Frankia sp. CcI35
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255866
FALN326424 ncbi Frankia alni ACN14a5
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough6
DRED349161 ncbi Desulfotomaculum reducens MI-16
DRAD243230 ncbi Deinococcus radiodurans R16
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DGEO319795 ncbi Deinococcus geothermalis DSM 113006
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G206
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF86
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111685
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
CFET360106 ncbi Campylobacter fetus fetus 82-406
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto6
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6576
CBOT498213 ncbi Clostridium botulinum B1 str. Okra6
CBOT441772 ncbi Clostridium botulinum F str. Langeland6
CBOT441771 ncbi Clostridium botulinum A str. Hall6
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193976
CBOT36826 Clostridium botulinum A6
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80526
BXEN266265 ncbi Burkholderia xenovorans LB4005
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13306
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis6
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M6
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233656
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1006
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis6
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ACRY349163 ncbi Acidiphilium cryptum JF-56
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABAU360910 ncbi Bordetella avium 197N6
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  EG10541   EG10540   EG10539   EG10538   EG10537   EG10536   
YPSE349747 YPSIP31758_0246YPSIP31758_0244YPSIP31758_0244YPSIP31758_0245YPSIP31758_0247YPSIP31758_0248
YPSE273123 YPTB0228YPTB0226YPTB0226YPTB0227YPTB0229YPTB0230
YPES386656 YPDSF_3423YPDSF_3425YPDSF_3425YPDSF_3424YPDSF_3422YPDSF_3421
YPES377628 YPN_0158YPN_0156YPN_0156YPN_0157YPN_0159YPN_0160
YPES360102 YPA_0218YPA_0214YPA_0214YPA_0217YPA_0219YPA_0220
YPES349746 YPANGOLA_A3668YPANGOLA_A3668YPANGOLA_A3667YPANGOLA_A3665YPANGOLA_A3664
YPES214092 YPO3806YPO3808YPO3808YPO3807YPO3805YPO3804
YPES187410 Y0424Y0422Y0422Y0423Y0425Y0426
YENT393305 YE0232YE0230YE0230YE0231YE0233YE0234
XAUT78245 XAUT_3901XAUT_3905XAUT_3905XAUT_3900XAUT_3902XAUT_3903
VEIS391735 VEIS_1872VEIS_1870VEIS_1870VEIS_1871VEIS_1873VEIS_1874
TWHI218496 TW0187TW0185TW0186TW0188TW0189
TWHI203267 TW559TW561TW560TW558TW557
TTHE300852 TTHA1332TTHA1330TTHA1330TTHA1331TTHA1335
TTHE262724 TT_C0968TT_C0966TT_C0966TT_C0967TT_C0969TT_C0970
TSP28240 TRQ2_1674TRQ2_1676TRQ2_1675TRQ2_1673TRQ2_1672
TPET390874 TPET_1608TPET_1610TPET_1609TPET_1607TPET_1606
TMAR243274 TM_1137TM_1135TM_1136TM_1138TM_1139
SWOL335541 SWOL_2111SWOL_2556SWOL_2112SWOL_2553SWOL_2552
STYP99287 STM3562STM3567STM3567STM3563STM3561STM3560
STRO369723 STROP_3148STROP_3150STROP_3150STROP_3149STROP_3147STROP_3146
STHE322159 STER_0400STER_0398STER_0399STER_0401STER_0402
STHE299768 STR0361STR0359STR0360STR0362STR0363
STHE264199 STU0361STU0359STU0360STU0362STU0363
SSUI391296 SSU98_1556SSU98_1558SSU98_1558SSU98_1557SSU98_1555SSU98_1554
SSUI391295 SSU05_1546SSU05_1548SSU05_1548SSU05_1547SSU05_1544SSU05_1543
SSON300269 SSO_3694SSO_3698SSO_3698SSO_3695SSO_3693SSO_3692
SPRO399741 SPRO_0230SPRO_0228SPRO_0228SPRO_0229SPRO_0231SPRO_0232
SPNE488221 SP70585_0796SP70585_0794SP70585_0795SP70585_0797SP70585_0798
SPNE487214 SPH_0852SPH_0850SPH_0851SPH_0853SPH_0854
SPNE487213 SPT_0765SPT_0763SPT_0764SPT_0766SPT_0767
SPNE171101 SPR0661SPR0659SPR0660SPR0662SPR0663
SPNE170187 SPN04126SPN04123SPN04125SPN04127SPN04128
SPNE1313 SPJ_0689SPJ_0687SPJ_0688SPJ_0690SPJ_0691
SMUT210007 SMU_1667SMU_1669SMU_1669SMU_1668SMU_1666SMU_1665
SMEL266834 SMC01950SMC00078SMC00078SMC01951SMC01949SMC01948
SMED366394 SMED_2396SMED_0538SMED_0538SMED_2397SMED_2395SMED_2394
SHIGELLA LIVMLIVKLIVKLIVHLIVGLIVF
SGOR29390 SGO_1628SGO_1630SGO_1629SGO_1627SGO_1626
SFUM335543 SFUM_0836SFUM_0834SFUM_0834SFUM_0835SFUM_0857SFUM_4073
SFLE373384 SFV_3459SFV_3463SFV_3463SFV_3460SFV_3458SFV_3457
SFLE198214 AAN44933.1AAN44937.1AAN44937.1AAN44934.1AAN44932.1AAN44931.1
SENT454169 SEHA_C3874SEHA_C3879SEHA_C3879SEHA_C3875SEHA_C3873SEHA_C3872
SENT321314 SCH_3491SCH_3496SCH_3496SCH_3492SCH_3490SCH_3489
SENT295319 SPA3413SPA3418SPA3418SPA3414SPA3412SPA3411
SENT220341 STY4250STY4248STY4248STY4249STY4251STY4252
SENT209261 T3960T3958T3958T3959T3961T3962
SDYS300267 SDY_3605SDY_3611SDY_3611SDY_3606SDY_3604SDY_3603
SCO SCO2010SCO2008SCO2008SCO2009SCO2011SCO2012
SBOY300268 SBO_3451SBO_3457SBO_3457SBO_3452SBO_3450SBO_3449
SAVE227882 SAV6222SAV6224SAV6224SAV6223SAV6221SAV6220
SARE391037 SARE_3375SARE_3377SARE_3377SARE_3376SARE_3374SARE_3373
SACI56780 SYN_00787SYN_00789SYN_00789SYN_00788SYN_00786SYN_00785
RSP357808 ROSERS_2977ROSERS_2975ROSERS_2975ROSERS_2976ROSERS_2978ROSERS_2979
RSOL267608 RSC2439RSP1592RSP1592RSC2440RSP0016RSP0017
RRUB269796 RRU_A1750RRU_A1746RRU_A1746RRU_A1751RRU_A1749RRU_A1748
RPAL316058 RPB_3682RPB_3685RPB_3685RPB_3681RPB_3683RPB_3684
RPAL316057 RPD_1778RPD_1775RPD_1775RPD_1779RPD_1777RPD_1776
RPAL316056 RPC_1621RPC_1618RPC_1618RPC_1622RPC_1620RPC_1619
RPAL316055 RPE_1650RPE_1647RPE_1647RPE_1651RPE_1649RPE_1648
RPAL258594 RPA3807RPA3810RPA3810RPA3806RPA3808RPA3809
RMET266264 RMET_2478RMET_2480RMET_2480RMET_2479RMET_2477RMET_2476
RLEG216596 RL3749RL3745RL3540RL3750RL3748RL3747
RFER338969 RFER_3171RFER_2119RFER_2810RFER_3172RFER_3170RFER_3169
REUT381666 H16_A2624H16_A2626H16_A2626H16_A2625H16_A2623H16_A2622
REUT264198 REUT_A2317REUT_A2319REUT_A2319REUT_A2318REUT_A2316REUT_A2315
RETL347834 RHE_CH03325RHE_CH03321RHE_CH03093RHE_CH03326RHE_CH03324RHE_CH03323
RCAS383372 RCAS_1894RCAS_1892RCAS_1892RCAS_1893RCAS_1895RCAS_3498
PTHE370438 PTH_2349PTH_2382PTH_2382PTH_0076PTH_2348PTH_0073
PSYR223283 PSPTO_4110PSPTO_4108PSPTO_4108PSPTO_4109PSPTO_4111PSPTO_4112
PSYR205918 PSYR_3847PSYR_3845PSYR_3845PSYR_3846PSYR_3848PSYR_3849
PSTU379731 PST_2984PST_2982PST_2982PST_2983PST_2985PST_2986
PSP312153 PNUC_1728PNUC_1730PNUC_1730PNUC_1729PNUC_1727PNUC_1726
PSP296591 BPRO_3795BPRO_2411BPRO_2411BPRO_3796BPRO_3794BPRO_3793
PPUT76869 PPUTGB1_4278PPUTGB1_4276PPUTGB1_4276PPUTGB1_4277PPUTGB1_4279PPUTGB1_4280
PPUT351746 PPUT_1173PPUT_1175PPUT_1175PPUT_1174PPUT_1172PPUT_1171
PPUT160488 PP_1139PP_1141PP_1141PP_1140PP_1138PP_1137
PNAP365044 PNAP_3207PNAP_2166PNAP_2166PNAP_3208PNAP_3206PNAP_3518
PMEN399739 PMEN_1385PMEN_1387PMEN_1387PMEN_1386PMEN_1384PMEN_1383
PLUM243265 PLU4096PLU4098PLU4098PLU4097PLU4095PLU4094
PFLU220664 PFL_1298PFL_1300PFL_1300PFL_1299PFL_1297PFL_1296
PFLU216595 PFLU1344PFLU1346PFLU1346PFLU1345PFLU1343PFLU1342
PFLU205922 PFL_1246PFL_1248PFL_1248PFL_1247PFL_1245PFL_1244
PENT384676 PSEEN1284PSEEN1286PSEEN1286PSEEN1285PSEEN1283PSEEN1282
PAER208964 PA1072PA1074PA1074PA1073PA1071PA1070
PAER208963 PA14_50540PA14_50520PA14_50520PA14_50530PA14_50550PA14_50560
OCAR504832 OCAR_5479OCAR_5475OCAR_5475OCAR_5480OCAR_5478OCAR_5477
OANT439375 OANT_1113OANT_1117OANT_0042OANT_1112OANT_1114OANT_1115
NWIN323098 NWI_2210NWI_2213NWI_2213NWI_2209NWI_2211NWI_2212
NHAM323097 NHAM_2612NHAM_2615NHAM_2615NHAM_2611NHAM_2613NHAM_2614
NFAR247156 NFA18730NFA18710NFA18710NFA18720NFA18740NFA18740
MXAN246197 MXAN_6663MXAN_6665MXAN_6665MXAN_6664MXAN_6662MXAN_6661
MTHE264732 MOTH_2500MOTH_2502MOTH_2501MOTH_2499MOTH_2498
MSP409 M446_5436M446_4698M446_5431M446_5437M446_5435M446_5433
MSP400668 MMWYL1_0729MMWYL1_0727MMWYL1_0727MMWYL1_0728MMWYL1_0730MMWYL1_0731
MSP266779 MESO_3324MESO_3328MESO_3328MESO_3323MESO_3325MESO_3326
MSME246196 MSMEG_3249MSMEG_3247MSMEG_3247MSMEG_3250MSMEG_3251
MPET420662 MPE_A1124MPE_A1940MPE_A1940MPE_A1123MPE_A1125MPE_A1126
MMAG342108 AMB1804AMB2981AMB2981AMB1805AMB1803AMB1802
MLOT266835 MLL3976MLR7721MLR7721MLL3977MLL3975MLL3974
MEXT419610 MEXT_4851MEXT_2534MEXT_2534MEXT_3367MEXT_3368
MAQU351348 MAQU_3337MAQU_3335MAQU_3335MAQU_3336MAQU_3338MAQU_3339
MABS561007 MAB_2624CMAB_2626CMAB_2626CMAB_2625CMAB_2623CMAB_2622C
LSPH444177 BSPH_4668BSPH_4670BSPH_4670BSPH_4669BSPH_4667BSPH_4666
LPLA220668 LP_2983LP_2985LP_2985LP_2984LP_2982LP_2981
LMES203120 LEUM_0482LEUM_0480LEUM_0481LEUM_0483LEUM_0484
LINT363253 LI0337LI0339LI0339LI0338LI0499LI0335
LCHO395495 LCHO_0760LCHO_3346LCHO_3346LCHO_0759LCHO_0761LCHO_0762
LCAS321967 LSEI_0267LSEI_0265LSEI_0265LSEI_0266LSEI_0268LSEI_0269
KRAD266940 KRAD_2955KRAD_2957KRAD_2957KRAD_2954KRAD_2953
KPNE272620 GKPORF_B3160GKPORF_B3167GKPORF_B3167GKPORF_B3161GKPORF_B3159GKPORF_B3158
JSP375286 MMA_2547MMA_0665MMA_0665MMA_2548MMA_2546MMA_0782
HMOD498761 HM1_0492HM1_0489HM1_0489HM1_0491HM1_0493HM1_0494
HCHE349521 HCH_01252HCH_00282HCH_01255HCH_01254HCH_01251HCH_01250
HAUR316274 HAUR_3004HAUR_2323HAUR_2323HAUR_3005HAUR_3003HAUR_3002
HARS204773 HEAR2464HEAR0738HEAR0738HEAR2465HEAR2463HEAR2462
GVIO251221 GLR2691GLR2353GLR2353GLR1238GLR2280GLR2898
GTHE420246 GTNG_2928GTNG_2930GTNG_2930GTNG_2929GTNG_2927GTNG_2926
GSUL243231 GSU_1732GSU_3401GSU_3401GSU_3394GSU_3392GSU_1730
GKAU235909 GK2978GK2980GK2980GK2979GK2977GK2976
FSP1855 FRANEAN1_2039FRANEAN1_2037FRANEAN1_2037FRANEAN1_2038FRANEAN1_2040
FSP106370 FRANCCI3_0343FRANCCI3_1620FRANCCI3_0342FRANCCI3_0344FRANCCI3_0345
FNUC190304 FN1430FN1432FN1432FN1431FN1429FN1428
FALN326424 FRAAL0727FRAAL4616FRAAL0726FRAAL0728FRAAL0729
ESP42895 ENT638_3859ENT638_3863ENT638_3863ENT638_3860ENT638_3858ENT638_3857
EFER585054 EFER_3429EFER_3433EFER_3433EFER_3430EFER_3428EFER_3427
ECOO157 LIVMLIVJLIVJLIVHLIVGLIVF
ECOL83334 ECS4303ECS4309ECS4309ECS4304ECS4302ECS4301
ECOL585397 ECED1_4129ECED1_4133ECED1_4133ECED1_4130ECED1_4128ECED1_4127
ECOL585057 ECIAI39_3937ECIAI39_3941ECIAI39_3941ECIAI39_3938ECIAI39_3936ECIAI39_3935
ECOL585056 ECUMN_3918ECUMN_3922ECUMN_3922ECUMN_3919ECUMN_3917ECUMN_3916
ECOL585055 EC55989_3864EC55989_3868EC55989_3868EC55989_3865EC55989_3863EC55989_3862
ECOL585035 ECS88_3853ECS88_3857ECS88_3857ECS88_3854ECS88_3852ECS88_3851
ECOL585034 ECIAI1_3600ECIAI1_3606ECIAI1_3606ECIAI1_3601ECIAI1_3599ECIAI1_3598
ECOL481805 ECOLC_0260ECOLC_0258ECOLC_0258ECOLC_0259ECOLC_0261ECOLC_0262
ECOL469008 ECBD_0285ECBD_0283ECBD_0283ECBD_0284ECBD_0286ECBD_0287
ECOL439855 ECSMS35_3738ECSMS35_3743ECSMS35_3743ECSMS35_3739ECSMS35_3737ECSMS35_3735
ECOL413997 ECB_03305ECB_03309ECB_03309ECB_03306ECB_03304ECB_03303
ECOL409438 ECSE_3722ECSE_3728ECSE_3728ECSE_3723ECSE_3721ECSE_3720
ECOL405955 APECO1_3003APECO1_2999APECO1_2999APECO1_3002APECO1_3004APECO1_3005
ECOL364106 UTI89_C3963UTI89_C3969UTI89_C3969UTI89_C3964UTI89_C3962UTI89_C3961
ECOL362663 ECP_3549ECP_3553ECP_3553ECP_3550ECP_3548ECP_3547
ECOL331111 ECE24377A_3935ECE24377A_3942ECE24377A_3942ECE24377A_3936ECE24377A_3934ECE24377A_3933
ECOL316407 ECK3440:JW3421:B3456ECK3442:JW3423:B3458ECK3442:JW3423:B3458ECK3441:JW3422:B3457ECK3439:JW3420:B3455ECK3438:JW3419:B3454
ECOL199310 C4246C4253C4253C4247C4245C4244
ECAR218491 ECA4339ECA4341ECA4341ECA4340ECA4338ECA4337
DVUL882 DVU_0549DVU_0547DVU_0547DVU_0548DVU_0550DVU_0551
DRED349161 DRED_1722DRED_1720DRED_2240DRED_1721DRED_2237DRED_2236
DRAD243230 DR_1036DR_1038DR_1038DR_1037DR_1035DR_2118
DPSY177439 DP2488DP2490DP2490DP2489DP1270DP2486
DHAF138119 DSY5024DSY0171DSY0171DSY5025DSY5023DSY5022
DGEO319795 DGEO_1207DGEO_1636DGEO_1636DGEO_1206DGEO_1208DGEO_1209
DDES207559 DDE_0610DDE_0612DDE_0612DDE_0611DDE_0609DDE_0608
DARO159087 DARO_0272DARO_0270DARO_0270DARO_0271DARO_0365DARO_0364
CVIO243365 CV_1504CV_2481CV_2481CV_1503CV_1505CV_1506
CKOR374847 KCR_1254KCR_1252KCR_1252KCR_1253KCR_1255KCR_1256
CJEJ192222 CJ1016CCJ1019CCJ1017CCJ1015CCJ1014C
CHYD246194 CHY_2230CHY_2238CHY_2238CHY_2231CHY_2229CHY_2228
CFET360106 CFF8240_0401CFF8240_0399CFF8240_0399CFF8240_0400CFF8240_0402CFF8240_0403
CDES477974 DAUD_1129DAUD_1131DAUD_1130DAUD_1389DAUD_1127
CBOT536232 CLM_0538CLM_0536CLM_0536CLM_0537CLM_0539CLM_0540
CBOT515621 CLJ_B0529CLJ_B0527CLJ_B0527CLJ_B0528CLJ_B0530CLJ_B0531
CBOT498213 CLD_0287CLD_0289CLD_0289CLD_0288CLD_0286CLD_0285
CBOT441772 CLI_0541CLI_0539CLI_0539CLI_0540CLI_0542CLI_0543
CBOT441771 CLC_0529CLC_0527CLC_0527CLC_0528CLC_0530CLC_0531
CBOT441770 CLB_0496CLB_0494CLB_0494CLB_0495CLB_0497CLB_0498
CBOT36826 CBO0455CBO0453CBO0453CBO0454CBO0456CBO0457
CBEI290402 CBEI_2767CBEI_2769CBEI_5042CBEI_5043CBEI_5045CBEI_2765
BXEN266265 BXE_C0096BXE_B1023BXE_B1023BXE_C0096BXE_C0865
BVIE269482 BCEP1808_3371BCEP1808_3373BCEP1808_3373BCEP1808_3372BCEP1808_3370BCEP1808_3369
BTHA271848 BTH_II1837BTH_II1839BTH_II1839BTH_II1838BTH_II1836BTH_II1835
BSUI470137 BSUIS_B1266BSUIS_B1262BSUIS_A0014BSUIS_B1267BSUIS_B1265
BSUI204722 BR_1790BR_1785BR_0014BR_1791BR_1789BR_A0395
BSP376 BRADO2851BRADO2848BRADO2848BRADO2852BRADO2850BRADO2849
BSP36773 BCEP18194_B0653BCEP18194_B0651BCEP18194_B0651BCEP18194_B0652BCEP18194_B0654BCEP18194_B0655
BPSE320373 BURPS668_A0864BURPS668_A0862BURPS668_A0862BURPS668_A0863BURPS668_A0865BURPS668_A0866
BPSE320372 BURPS1710B_B2499BURPS1710B_B2497BURPS1710B_B2497BURPS1710B_B2498BURPS1710B_B2500BURPS1710B_B2501
BPSE272560 BPSS0577BPSS0575BPSS0575BPSS0576BPSS0578BPSS0579
BPET94624 BPET2323BPET2312BPET2312BPET2322BPET2324BPET2325
BPER257313 BP1275BP1285BP1285BP1276BP1274BP1273
BPAR257311 BPP2939BPP2948BPP2948BPP2940BPP2938BPP2937
BOVI236 GBOORF1795GBOORF1791GBOORF0012GBOORF1796GBOORF1794GBOORF1793
BMEL359391 BAB1_1798BAB1_1794BAB1_1794BAB1_1799BAB1_1796
BMEL224914 BMEI0259BMEI0263BMEI1930BMEI0258BMEI0260BMEI0261
BMAL320389 BMA10247_0264BMA10247_2962BMA10247_2962BMA10247_0265BMA10247_0266
BMAL320388 BMASAVP1_A0941BMASAVP1_A3407BMASAVP1_A3407BMASAVP1_A0940BMASAVP1_A0942BMASAVP1_A0943
BMAL243160 BMA_1972BMA_2901BMA_2901BMA_1973BMA_1971BMA_1970
BJAP224911 BLR5672BLR5675BLR5675BLR5671BLR5673BLR5674
BCEN331272 BCEN2424_5017BCEN2424_5019BCEN2424_5019BCEN2424_5018BCEN2424_5016BCEN2424_5015
BCEN331271 BCEN_3350BCEN_3348BCEN_3348BCEN_3349BCEN_3351BCEN_3352
BCAN483179 BCAN_A1828BCAN_A1823BCAN_A0014BCAN_A1829BCAN_A1827BCAN_B0398
BBRO257310 BB2907BB2916BB2916BB2908BB2906BB2905
BBAC264462 BD3387BD3385BD3385BD3386BD3388BD3389
BAMB398577 BAMMC406_4945BAMMC406_4947BAMMC406_4947BAMMC406_4946BAMMC406_4944BAMMC406_4943
BAMB339670 BAMB_4430BAMB_4432BAMB_4432BAMB_4431BAMB_4429BAMB_4428
BABO262698 BRUAB1_1771BRUAB1_1767BRUAB1_1767BRUAB1_1772BRUAB1_1769
ASP76114 EBA3170EBA3173EBA3175EBA3172EBA3169EBA3167
ASP62928 AZO3732AZO3730AZO3729AZO3731AZO3733AZO3734
ASP232721 AJS_3255AJS_3253AJS_3253AJS_3254AJS_3256AJS_3257
ASAL382245 ASA_4281ASA_4279ASA_4279ASA_4280ASA_4282ASA_4283
AMET293826 AMET_4117AMET_4119AMET_4118AMET_4116AMET_4115
AHYD196024 AHA_0111AHA_0113AHA_0113AHA_0112AHA_0110AHA_0109
ADEH290397 ADEH_4259ADEH_4261ADEH_4261ADEH_4260ADEH_4258ADEH_2428
ACRY349163 ACRY_0358ACRY_0360ACRY_0360ACRY_0359ACRY_0357ACRY_0356
ACAU438753 AZC_2943AZC_2947AZC_2947AZC_2942AZC_2944AZC_2945
ABAU360910 BAV1893BAV1903BAV1903BAV1894BAV1892BAV1891
AAVE397945 AAVE_1876AAVE_3159AAVE_3159AAVE_1875AAVE_1877AAVE_1878


Organism features enriched in list (features available for 194 out of the 207 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.005332248112
Disease:Botulism 0.003940755
Disease:Brucellosis 0.003940755
Disease:Bubonic_plague 0.001288666
Disease:Dysentery 0.001288666
Disease:Opportunistic_infections 0.003940755
Endospores:No 1.263e-645211
GC_Content_Range4:0-40 3.460e-2023213
GC_Content_Range4:40-60 0.008526686224
GC_Content_Range4:60-100 2.009e-1385145
GC_Content_Range7:0-30 0.0053660847
GC_Content_Range7:30-40 4.011e-1715166
GC_Content_Range7:40-50 0.004690428117
GC_Content_Range7:50-60 4.089e-758107
GC_Content_Range7:60-70 6.744e-1278134
Genome_Size_Range5:0-2 1.156e-1613155
Genome_Size_Range5:2-4 8.687e-643197
Genome_Size_Range5:4-6 2.120e-14102184
Genome_Size_Range5:6-10 2.319e-103647
Genome_Size_Range9:0-1 0.0013113227
Genome_Size_Range9:1-2 3.356e-1311128
Genome_Size_Range9:2-3 1.015e-717120
Genome_Size_Range9:4-5 2.267e-75496
Genome_Size_Range9:5-6 4.361e-64888
Genome_Size_Range9:6-8 2.655e-93038
Gram_Stain:Gram_Neg 0.0000131134333
Habitat:Aquatic 0.00741472191
Habitat:Host-associated 0.000100949206
Habitat:Multiple 1.341e-991178
Motility:No 0.000033631151
Motility:Yes 8.199e-6113267
Optimal_temp.:25-30 0.00125991319
Optimal_temp.:30-37 0.0056401118
Oxygen_Req:Facultative 0.000291985201
Shape:Rod 2.774e-7143347
Shape:Sphere 0.0039198119
Shape:Spiral 0.0079082534
Temp._range:Mesophilic 0.0085333167473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 356
Effective number of orgs (counting one per cluster within 468 clusters): 270

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP94122 ncbi Shewanella sp. ANA-30
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP101510 ncbi Rhodococcus jostii RHA10
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP56811 Psychrobacter sp.0
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPRO298386 ncbi Photobacterium profundum SS90
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP290400 ncbi Jannaschia sp. CCS11
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP1667 Arthrobacter sp.1
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10541   EG10540   EG10539   EG10538   EG10537   EG10536   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WPIP955
WPIP80849
VVUL216895
VVUL196600
VPAR223926
VFIS312309
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
UMET351160
TVOL273116
TTUR377629
TTEN273068
TSP1755 TETH514_0572
TPSE340099
TPEN368408
TPAL243276
TKOD69014
TFUS269800 TFU_1782
TERY203124
TDEN326298
TDEN292415
TCRU317025
TACI273075
STOK273063
SSP94122
SSP84588
SSP64471
SSP644076
SSP387093
SSP292414
SSP1148
SSP1131
SSOL273057
SSED425104
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPEA398579
SONE211586
SMAR399550
SLOI323850
SHAL458817
SHAE279808
SEPI176280
SEPI176279
SDEN318161
SDEG203122
SBAL402882
SBAL399599
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SALA317655
SACI330779
RTYP257363
RSP101510
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PSP56811
PSP117
PRUM264731
PPRO298386
PPEN278197
PMUL272843
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616 PISL_1520
PINT246198
PING357804
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PCAR338963
PATL342610
PAST100379
PARS340102 PARS_0450
PARC259536
PAER178306 PAE1388
PACN267747
PABY272844
OTSU357244
NSP387092
NSEN222891
NPHA348780 NP4138A
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NEUT335283
NEUR228410
NARO279238
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
LXYL281090 LXX15020
LWEL386043
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMON265669
LMON169963
LLAC272623
LLAC272622
LJOH257314
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP290400 JANN_2264
ILOI283942
IHOS453591 IGNI_0730
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HACI382638
GOXY290633
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FRANT
FPHI484022
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DSHI398580
DNOD246195
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CJEI306537
CJAP155077
CHUT269798
CHOM360107
CGLU196627
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CCUR360105
CCON360104
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT508765
CBLO291272
CBLO203907
CAULO
CACE272562
CABO218497
BWEI315730
BTUR314724
BTHU412694
BTHU281309
BTHE226186
BSUB
BSP107806
BPUM315750
BLIC279010
BHER314723
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BBUR224326
BBAC360095
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977
ASP1667 ARTH_1157
APLE434271
APLE416269
APHA212042
APER272557 APE2526
ANAE240017
AMAR329726 AM1_5414
AMAR234826
ALAI441768 ACL_0500
AFER243159
AEHR187272
ABUT367737
ABOR393595
ABAC204669
AAUR290340 AAUR_1275
AAEO224324


Organism features enriched in list (features available for 332 out of the 356 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00495161517
Arrangment:Filaments 0.0027053110
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00189961111
Disease:Wide_range_of_infections 0.00189961111
Endospores:No 0.0009292137211
GC_Content_Range4:0-40 1.285e-19172213
GC_Content_Range4:60-100 2.930e-1542145
GC_Content_Range7:0-30 0.00006353947
GC_Content_Range7:30-40 1.603e-13133166
GC_Content_Range7:40-50 0.004890778117
GC_Content_Range7:50-60 1.281e-639107
GC_Content_Range7:60-70 3.857e-1340134
GC_Content_Range7:70-100 0.0085951211
Genome_Size_Range5:0-2 4.753e-18132155
Genome_Size_Range5:2-4 0.0013904128197
Genome_Size_Range5:4-6 1.966e-1266184
Genome_Size_Range5:6-10 7.309e-11647
Genome_Size_Range9:0-1 0.00003642527
Genome_Size_Range9:1-2 5.580e-13107128
Genome_Size_Range9:2-3 0.000089386120
Genome_Size_Range9:4-5 6.488e-83196
Genome_Size_Range9:5-6 0.00019753588
Genome_Size_Range9:6-8 9.049e-10438
Gram_Stain:Gram_Neg 0.0007887172333
Habitat:Host-associated 4.588e-7145206
Habitat:Multiple 7.099e-970178
Motility:No 0.0003664103151
Motility:Yes 9.703e-6127267
Optimal_temp.:30-37 0.00046391718
Pathogenic_in:No 0.0043491115226
Shape:Coccus 0.00430795782
Shape:Rod 2.118e-6171347
Shape:Sphere 0.00027301819



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 8
Effective number of orgs (counting one per cluster within 468 clusters): 7

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF8 0.00007203546
TWHI218496 ncbi Tropheryma whipplei TW08/27 0.00029611995
TWHI203267 ncbi Tropheryma whipplei Twist 0.00032722035
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-00 0.00403316906
CFET360106 ncbi Campylobacter fetus fetus 82-40 0.00525497216
SSUI391295 ncbi Streptococcus suis 05ZYH33 0.00645197466
SSUI391296 ncbi Streptococcus suis 98HAH33 0.00856847826
SMUT210007 ncbi Streptococcus mutans UA159 0.00939107946


Names of the homologs of the genes in the group in each of these orgs
  EG10541   EG10540   EG10539   EG10538   EG10537   EG10536   
CKOR374847 KCR_1254KCR_1252KCR_1252KCR_1253KCR_1255KCR_1256
TWHI218496 TW0187TW0185TW0186TW0188TW0189
TWHI203267 TW559TW561TW560TW558TW557
LINT363253 LI0337LI0339LI0339LI0338LI0499LI0335
CFET360106 CFF8240_0401CFF8240_0399CFF8240_0399CFF8240_0400CFF8240_0402CFF8240_0403
SSUI391295 SSU05_1546SSU05_1548SSU05_1548SSU05_1547SSU05_1544SSU05_1543
SSUI391296 SSU98_1556SSU98_1558SSU98_1558SSU98_1557SSU98_1555SSU98_1554
SMUT210007 SMU_1667SMU_1669SMU_1669SMU_1668SMU_1666SMU_1665


Organism features enriched in list (features available for 8 out of the 8 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Meningitis 0.000057637
Disease:Whipple's_disease 0.000165022
Disease:endocarditis 0.000969924
Disease:septicemia_and_arthritis 0.000165022
GC_Content_Range7:40-50 0.00890165117
Genome_Size_Range5:0-2 0.00505926155
Optimal_temp.:37 0.00061406106
Pathogenic_in:Swine 0.001599725



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491050.4433
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951240.4351
PWY0-901 (selenocysteine biosynthesis I (bacteria))2301350.4137
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761130.4127
P344-PWY (acrylonitrile degradation)2101260.4053



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10540   EG10539   EG10538   EG10537   EG10536   
EG105410.9998070.9997960.9999640.9999560.999922
EG105400.9999160.9998390.9997640.999741
EG105390.9998380.9997780.999741
EG105380.9999320.999902
EG105370.999952
EG10536



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PAIRWISE BLAST SCORES:

  EG10541   EG10540   EG10539   EG10538   EG10537   EG10536   
EG105410.0f0-----
EG10540-0.0f00---
EG10539-00.0f0---
EG10538---0.0f0--
EG10537----0.0f0-
EG10536-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-304-CPLX (leucine ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.833, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9999 0.9997 EG10536 (livF) LIVF-MONOMER (LivF)
   *in cand* 0.9999 0.9998 EG10537 (livG) LIVG-MONOMER (LivG)
   *in cand* 0.9999 0.9998 EG10538 (livH) LIVH-MONOMER (LivH)
   *in cand* 0.9999 0.9998 EG10541 (livM) LIVM-MONOMER (LivM)
   *in cand* 0.9998 0.9997 EG10540 (livK) LIVK-MONOMER (LivK, leucine binding protein of the high-affinity branched-chain amino acid transport system)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9997 EG10539 (livJ) LIVJ-MONOMER (LivJ)

- ABC-15-CPLX (branched chain amino acids ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.833, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9997 EG10539 (livJ) LIVJ-MONOMER (LivJ)
   *in cand* 0.9999 0.9998 EG10541 (livM) LIVM-MONOMER (LivM)
   *in cand* 0.9999 0.9998 EG10538 (livH) LIVH-MONOMER (LivH)
   *in cand* 0.9999 0.9998 EG10537 (livG) LIVG-MONOMER (LivG)
   *in cand* 0.9999 0.9997 EG10536 (livF) LIVF-MONOMER (LivF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9997 EG10540 (livK) LIVK-MONOMER (LivK, leucine binding protein of the high-affinity branched-chain amino acid transport system)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10536 EG10537 EG10538 EG10539 EG10540 EG10541 (centered at EG10538)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10541   EG10540   EG10539   EG10538   EG10537   EG10536   
257/623204/623204/623257/623250/623258/623
AAUR290340:2:Tyes0-----
AAVE397945:0:Tyes112631263023
ABAU360910:0:Tyes21212310
ACAU438753:0:Tyes155023
ACEL351607:0:Tyes1--023
ACRY349163:8:Tyes244310
ADEH290397:0:Tyes185018521852185118490
AFUL224325:0:Tyes1--20-
AHYD196024:0:Tyes244310
ALAI441768:0:Tyes-----0
AMAR329726:9:Tyes---0--
AMET293826:0:Tyes2-4310
AORE350688:0:Tyes2--310
APER272557:0:Tyes-----0
ASAL382245:5:Tyes200134
ASP1667:3:Tyes0-----
ASP232721:2:Tyes200134
ASP62928:0:Tyes310245
ASP76114:2:Tyes245310
AVAR240292:3:Tyes---025
BABO262698:1:Tno3004-2
BAMB339670:2:Tno244310
BAMB398577:2:Tno244310
BBAC264462:0:Tyes200134
BBRO257310:0:Tyes21111310
BCAN483179:0:Tno-----0
BCAN483179:1:Tno17461743017471745-
BCEN331271:1:Tno200134
BCEN331272:2:Tyes244310
BHEN283166:0:Tyes2--310
BJAP224911:0:Fyes144023
BLON206672:0:Tyes1--023
BMAL243160:1:Tno2848848310
BMAL320388:1:Tno124062406023
BMAL320389:1:Tyes026392639-12
BMEL224914:1:Tno151707023
BMEL359391:1:Tno3004-2
BOVI236:1:Tyes153215280153315311530
BPAR257311:0:Tno21111310
BPER257313:0:Tyes21212310
BPET94624:0:Tyes1100101213
BPSE272560:0:Tyes200134
BPSE320372:0:Tno300245
BPSE320373:0:Tno300245
BQUI283165:0:Tyes1--023
BSP36773:1:Tyes200134
BSP376:0:Tyes300421
BSUI204722:0:Tyes-----0
BSUI204722:1:Tyes17141710017151713-
BSUI470137:0:Tno30-42-
BSUI470137:1:Tno--0---
BTHA271848:0:Tno244310
BTRI382640:1:Tyes2--310
BVIE269482:6:Tyes244310
BXEN266265:0:Tyes0--0-722
BXEN266265:1:Tyes-00---
CBEI290402:0:Tyes242233223422360
CBOT36826:1:Tno200134
CBOT441770:0:Tyes200134
CBOT441771:0:Tno200134
CBOT441772:1:Tno200134
CBOT498213:1:Tno200134
CBOT515621:2:Tyes200134
CBOT536232:0:Tno200134
CCHL340177:0:Tyes---3-0
CDES477974:0:Tyes24-32670
CFET360106:0:Tyes200134
CHYD246194:0:Tyes266310
CJEJ192222:0:Tyes2-5310
CJEJ195099:0:Tno1--20-
CJEJ354242:2:Tyes2--310
CJEJ360109:0:Tyes1--02-
CJEJ407148:0:Tno1--20-
CKLU431943:1:Tyes2--310
CKOR374847:0:Tyes200134
CPHY357809:0:Tyes0--225222502
CSAL290398:0:Tyes-002--
CSP501479:5:Fyes----0-
CSP501479:6:Fyes1--0--
CSP501479:8:Fyes-----0
CVIO243365:0:Tyes1992992023
DARO159087:0:Tyes20019998
DDES207559:0:Tyes244310
DETH243164:0:Tyes0--1--
DGEO319795:1:Tyes1428428023
DHAF138119:0:Tyes490700490849064905
DOLE96561:0:Tyes1--023
DPSY177439:2:Tyes124212441244124301240
DRAD243230:3:Tyes133201059
DRED349161:0:Tyes205191516515
DSP216389:0:Tyes0--1--
DSP255470:0:Tno0--1--
DVUL882:1:Tyes200134
ECAR218491:0:Tyes244310
ECOL199310:0:Tno299310
ECOL316407:0:Tno200134
ECOL331111:6:Tno299310
ECOL362663:0:Tno266310
ECOL364106:1:Tno288310
ECOL405955:2:Tyes266310
ECOL409438:6:Tyes288310
ECOL413997:0:Tno266310
ECOL439855:4:Tno277310
ECOL469008:0:Tno200134
ECOL481805:0:Tno200134
ECOL585034:0:Tno288310
ECOL585035:0:Tno266310
ECOL585055:0:Tno266310
ECOL585056:2:Tno266310
ECOL585057:0:Tno266310
ECOL585397:0:Tno266310
ECOL83334:0:Tno288310
ECOLI:0:Tno246310
ECOO157:0:Tno288310
EFER585054:1:Tyes266310
ESP42895:1:Tyes266310
FALN326424:0:Tyes13802-023
FNOD381764:0:Tyes0--966968969
FNUC190304:0:Tyes244310
FSP106370:0:Tyes11289-023
FSP1855:0:Tyes20013-
GKAU235909:1:Tyes244310
GMET269799:1:Tyes2--310
GSUL243231:0:Tyes216641664165716550
GTHE420246:1:Tyes244310
GURA351605:0:Tyes3--420
GVIO251221:0:Tyes147311311131010561682
HARS204773:0:Tyes163100163216301629
HAUR316274:2:Tyes68400685683682
HCHE349521:0:Tyes9280930929927926
HMAR272569:6:Tyes---3-0
HMAR272569:8:Tyes----0-
HMOD498761:0:Tyes255310
HWAL362976:1:Tyes---151601300
IHOS453591:0:Tyes0-----
JSP290400:1:Tyes-----0
JSP375286:0:Tyes19080019091907117
KPNE272620:2:Tyes299310
KRAD266940:2:Fyes200-34
LCAS321967:1:Tyes200134
LCHO395495:0:Tyes126122612023
LINT363253:3:Tyes24431630
LMES203120:1:Tyes20-134
LPLA220668:0:Tyes244310
LSPH444177:1:Tyes244310
LXYL281090:0:Tyes----0-
MABS561007:1:Tyes244310
MAER449447:0:Tyes0--363637451650
MAQU351348:2:Tyes200134
MEXT419610:0:Tyes231300831832-
MGIL350054:3:Tyes2---10
MHUN323259:0:Tyes---0-2
MLOT266835:2:Tyes230343034310
MMAG342108:0:Tyes211791179310
MPET420662:1:Tyes1814814023
MSME246196:0:Tyes200-34
MSP164756:1:Tno24--10
MSP164757:0:Tno24--10
MSP189918:2:Tyes24--10
MSP266779:3:Tyes155023
MSP400668:0:Tyes200134
MSP409:2:Tyes7280723729727725
MTHE264732:0:Tyes24-310
MVAN350058:0:Tyes0---12
MXAN246197:0:Tyes244310
NFAR247156:2:Tyes200133
NHAM323097:2:Tyes144023
NPHA348780:2:Tyes-----0
NSP103690:6:Tyes2--035
NSP35761:1:Tyes1--0--
NWIN323098:0:Tyes144023
OANT439375:5:Tyes108710910108610881089
OCAR504832:0:Tyes400532
OIHE221109:0:Tyes---023
PAER178306:0:Tyes-----0
PAER208963:0:Tyes200134
PAER208964:0:Tno244310
PARS340102:0:Tyes-----0
PENT384676:0:Tyes244310
PFLU205922:0:Tyes244310
PFLU216595:1:Tyes244310
PFLU220664:0:Tyes244310
PISL384616:0:Tyes-----0
PLUM243265:0:Fyes244310
PMEN399739:0:Tyes244310
PMOB403833:0:Tyes1--023
PNAP365044:8:Tyes104400104510431357
PPUT160488:0:Tno244310
PPUT351746:0:Tyes244310
PPUT76869:0:Tno200134
PSP296591:2:Tyes137400137513731372
PSP312153:0:Tyes244310
PSTU379731:0:Tyes200134
PSYR205918:0:Tyes200134
PSYR223283:2:Tyes200134
PTHE370438:0:Tyes232223552355323210
RCAS383372:0:Tyes200131587
RDEN375451:4:Tyes---6140613
RETL347834:5:Tyes2302260231229228
REUT264198:3:Tyes244310
REUT381666:2:Tyes244310
RFER338969:1:Tyes10520691105310511050
RLEG216596:6:Tyes2092050210208207
RMET266264:2:Tyes244310
RPAL258594:0:Tyes144023
RPAL316055:0:Tyes300421
RPAL316056:0:Tyes300421
RPAL316057:0:Tyes300421
RPAL316058:0:Tyes144023
RPOM246200:0:Tyes0-----
RPOM246200:1:Tyes---01716
RRUB269796:1:Tyes400532
RSAL288705:0:Tyes3-0-45
RSOL267608:0:Tyes-15801580-01
RSOL267608:1:Tyes0--1--
RSP357808:0:Tyes200134
RSPH272943:4:Tyes-003--
RSPH349101:1:Tno1--0--
RSPH349101:2:Tno-00---
RSPH349102:4:Tyes0-----
RSPH349102:5:Tyes-330--
RXYL266117:0:Tyes1671--167216700
SACI56780:0:Tyes200134
SAGA205921:0:Tno2--310
SAGA208435:0:Tno2--310
SAGA211110:0:Tyes2--310
SARE391037:0:Tyes244310
SAVE227882:1:Fyes244310
SBOY300268:1:Tyes288310
SCO:2:Fyes200134
SDYS300267:1:Tyes288310
SELO269084:0:Tyes1--023
SENT209261:0:Tno200134
SENT220341:0:Tno200134
SENT295319:0:Tno277310
SENT321314:2:Tno277310
SENT454169:2:Tno277310
SERY405948:0:Tyes---3-0
SFLE198214:0:Tyes266310
SFLE373384:0:Tno266310
SFUM335543:0:Tyes2001233207
SGLO343509:3:Tyes-00---
SGOR29390:0:Tyes2-4310
SHIGELLA:0:Tno200134
SLAC55218:1:Fyes----10
SMED366394:3:Tyes183400183518331832
SMEL266834:2:Tyes158800158915871586
SMUT210007:0:Tyes244310
SPNE1313:0:Tyes2-0134
SPNE170187:0:Tyes2-0134
SPNE171101:0:Tno2-0134
SPNE487213:0:Tno2-0134
SPNE487214:0:Tno2-0134
SPNE488221:0:Tno2-0134
SPRO399741:1:Tyes200134
SSON300269:1:Tyes266310
SSP321327:0:Tyes0135-1--
SSP321332:0:Tyes0--1--
SSUI391295:0:Tyes355410
SSUI391296:0:Tyes244310
STHE264199:0:Tyes2-0134
STHE292459:0:Tyes1567--023
STHE299768:0:Tno2-0134
STHE322159:2:Tyes2-0134
STRO369723:0:Tyes244310
STYP99287:1:Tyes277310
SWOL335541:0:Tyes0-4401437436
TDEN243275:0:Tyes2--310
TELO197221:0:Tyes0--114115861474
TFUS269800:0:Tyes-----0
TLET416591:0:Tyes282--011603
TMAR243274:0:Tyes20-134
TPET390874:0:Tno24-310
TROS309801:0:Tyes1--023
TSP1755:0:Tyes-----0
TSP28240:0:Tyes24-310
TTHE262724:1:Tyes200134
TTHE300852:2:Tyes2001-5
TWHI203267:0:Tyes24-310
TWHI218496:0:Tno20-134
VEIS391735:1:Tyes200134
WSUC273121:0:Tyes2--310
XAUT78245:1:Tyes155023
YENT393305:1:Tyes200134
YPES187410:5:Tno200134
YPES214092:3:Tno244310
YPES349746:2:Tno-44310
YPES360102:3:Tyes400356
YPES377628:2:Tno200134
YPES386656:2:Tno244310
YPSE273123:2:Tno200134
YPSE349747:2:Tno200134



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