CANDIDATE ID: 147

CANDIDATE ID: 147

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9959153e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11081 (ispH) (b0029)
   Products of gene:
     - EG11081-MONOMER (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase)
     - CPLX0-7564 (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase)
       Reactions:
        NAD(P)H + 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate + H+  ->  NAD(P)+ + dimethylallyl diphosphate + H2O
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)
        1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate + NAD(P)H + H+  ->  isopentenyl diphosphate + NAD(P)+ + H2O
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG11080 (fkpB) (b0028)
   Products of gene:
     - EG11080-MONOMER (peptidylprolyl isomerase)
       Reactions:
        peptidylproline (omega = 180)  =  peptidylproline (omega = 0)

- EG11079 (ribF) (b0025)
   Products of gene:
     - RIBF-MONOMER (bifunctional riboflavin kinase / FMN adenylyltransferase)
       Reactions:
        riboflavin + ATP  ->  FMN + ADP + 2 H+
         In pathways
         PWY-5523 (PWY-5523)
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6168 (PWY-6168)
         PWY66-366 (PWY66-366)
        FMN + ATP  ->  FAD + diphosphate
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)
         PWY66-366 (PWY66-366)

- EG10919 (rpsT) (b0023)
   Products of gene:
     - EG10919-MONOMER (30S ribosomal subunit protein S20)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10548 (lspA) (b0027)
   Products of gene:
     - EG10548-MONOMER (prolipoprotein signal peptidase II)
       Reactions:
        EC# 3.4.23.36

- EG10492 (ileS) (b0026)
   Products of gene:
     - ILES-MONOMER (isoleucyl-tRNA synthetase)
       Reactions:
        tRNAile + L-isoleucine + ATP  ->  L-isoleucyl-tRNAile + diphosphate + AMP
         In pathways
         TRNA-CHARGING-PWY (tRNA charging pathway)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 272
Effective number of orgs (counting one per cluster within 468 clusters): 192

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79015
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-36
SSP644076 Silicibacter sp. TrichCH4B5
SSP387093 ncbi Sulfurovum sp. NBC37-15
SSP292414 ncbi Ruegeria sp. TM10406
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis6
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SALA317655 ncbi Sphingopyxis alaskensis RB22565
SACI56780 ncbi Syntrophus aciditrophicus SB5
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-36
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC16
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAR394221 ncbi Maricaulis maris MCS105
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1305
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566015
LCHO395495 ncbi Leptothrix cholodnii SP-66
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5505
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)5
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)5
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HNEP81032 Hyphomonas neptunium5
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL16
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-006
FTUL418136 ncbi Francisella tularensis tularensis WY96-34186
FTUL401614 ncbi Francisella novicida U1126
FTUL393115 ncbi Francisella tularensis tularensis FSC1986
FTUL393011 ncbi Francisella tularensis holarctica OSU186
FTUL351581 Francisella tularensis holarctica FSC2006
FRANT ncbi Francisella tularensis tularensis SCHU S46
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250176
ESP42895 Enterobacter sp.6
ELIT314225 ncbi Erythrobacter litoralis HTCC25946
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough5
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DRED349161 ncbi Desulfotomaculum reducens MI-15
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DOLE96561 ncbi Desulfococcus oleovorans Hxd36
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA6
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)5
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CAULO ncbi Caulobacter crescentus CB155
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTRI382640 ncbi Bartonella tribocorum CIP 1054765
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.6
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BQUI283165 ncbi Bartonella quintana Toulouse5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-15
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC360095 ncbi Bartonella bacilliformis KC5835
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)5
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ACRY349163 ncbi Acidiphilium cryptum JF-55
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  EG11081   EG11080   EG11079   EG10919   EG10548   EG10492   
YPSE349747 YPSIP31758_3457YPSIP31758_3458YPSIP31758_3461YPSIP31758_3462YPSIP31758_3459YPSIP31758_3460
YPSE273123 YPTB0620YPTB0619YPTB0616YPTB0615YPTB0618YPTB0617
YPES386656 YPDSF_3154YPDSF_3155YPDSF_3158YPDSF_3159YPDSF_3156YPDSF_3157
YPES377628 YPN_0350YPN_0349YPN_0346YPN_0345YPN_0348YPN_0347
YPES360102 YPA_4071YPA_4070YPA_4067YPA_4066YPA_4069YPA_4068
YPES349746 YPANGOLA_A0787YPANGOLA_A0788YPANGOLA_A0791YPANGOLA_A0792YPANGOLA_A0789YPANGOLA_A0790
YPES214092 YPO0477YPO0476AYPO0474YPO0472YPO0476YPO0475
YPES187410 Y3697Y3698Y3701Y3702Y3699Y3700
YENT393305 YE0619YE0618YE0615YE0613YE0617YE0616
XORY360094 XOOORF_1576XOOORF_3106XOOORF_1573XOOORF_1571XOOORF_1575XOOORF_1574
XORY342109 XOO1514XOO1790XOO1511XOO1509XOO1513XOO1512
XORY291331 XOO1628XOO1893XOO1625XOO1623XOO1627XOO1626
XFAS405440 XFASM12_1576XFASM12_1579XFASM12_1581XFASM12_1577XFASM12_1578
XFAS183190 PD_1435PD_1438PD_1440PD_1436PD_1437
XFAS160492 XF2416XF2419XF2421XF2417XF2418
XCAM487884 XCC-B100_3181XCC-B100_2990XCC-B100_3184XCC-B100_3186XCC-B100_3182XCC-B100_3183
XCAM316273 XCAORF_1386XCAORF_1571XCAORF_1383XCAORF_1380XCAORF_1385XCAORF_1384
XCAM314565 XC_3085XC_2929XC_3088XC_3090XC_3086XC_3087
XCAM190485 XCC1157XCC1310XCC1154XCC1152XCC1156XCC1155
XAXO190486 XAC1256XAC1358XAC1253XAC1251XAC1255XAC1254
XAUT78245 XAUT_2355XAUT_1843XAUT_1690XAUT_2206XAUT_2207
VVUL216895 VV1_0504VV1_0505VV1_0508VV1_0511VV1_0506VV1_0507
VVUL196600 VV0690VV0689VV0686VV0684VV0688VV0687
VPAR223926 VP0537VP0536VP0533VP0531VP0535VP0534
VFIS312309 VF0470VF0469VF0466VF0464VF0468VF0467
VEIS391735 VEIS_1652VEIS_1653VEIS_2108VEIS_1777VEIS_2110VEIS_2109
VCHO345073 VC0395_A0217VC0395_A0216VC0395_A0213VC0395_A0211VC0395_A0215VC0395_A0214
VCHO VC0685VC0684VC0681VC0679VC0683VC0682
TTUR377629 TERTU_1042TERTU_1039TERTU_0965TERTU_1041TERTU_1040
TDEN292415 TBD_1860TBD_1859TBD_1856TBD_1854TBD_1858TBD_1857
TCRU317025 TCR_1376TCR_0494TCR_0492TCR_0496TCR_0495
SWOL335541 SWOL_1344SWOL_0904SWOL_1587SWOL_1287SWOL_0962
STYP99287 STM0049STM0048STM0045STM0043STM0047STM0046
STHE292459 STH910STH1526STH476STH1242STH1231
SSP94122 SHEWANA3_3133SHEWANA3_3134SHEWANA3_3137SHEWANA3_3140SHEWANA3_3135SHEWANA3_3136
SSP644076 SCH4B_2748SCH4B_0565SCH4B_3362SCH4B_3472SCH4B_2556
SSP387093 SUN_0548SUN_1759SUN_0064SUN_0066SUN_1796
SSP292414 TM1040_2569TM1040_3571TM1040_2071TM1040_3031TM1040_0092TM1040_2389
SSON300269 SSO_0034SSO_0033SSO_0030SSO_0028SSO_0032SSO_0031
SSED425104 SSED_1197SSED_1196SSED_1193SSED_1191SSED_1195SSED_1194
SPRO399741 SPRO_0701SPRO_0700SPRO_0697SPRO_0696SPRO_0699SPRO_0698
SPEA398579 SPEA_1086SPEA_1085SPEA_1082SPEA_1080SPEA_1084SPEA_1083
SONE211586 SO_3529SO_3530SO_3533SO_3537SO_3531SO_3532
SMEL266834 SMC00016SMC00909SMC01152SMC01129SMC00908
SMED366394 SMED_0527SMED_0411SMED_0001SMED_0026SMED_0412
SLOI323850 SHEW_1102SHEW_1101SHEW_1098SHEW_1096SHEW_1100SHEW_1099
SLAC55218 SL1157_1878SL1157_0283SL1157_1981SL1157_0806SL1157_1324SL1157_0224
SHIGELLA LYTBSLPARIBFRPSTLSPAILES
SHAL458817 SHAL_1134SHAL_1133SHAL_1130SHAL_1128SHAL_1132SHAL_1131
SGLO343509 SG0417SG0416SG0413SG0412SG0415SG0414
SFUM335543 SFUM_2710SFUM_3182SFUM_2087SFUM_0123SFUM_0122
SFLE373384 SFV_0023SFV_0022SFV_0019SFV_0018SFV_0021SFV_0020
SFLE198214 AAN41692.1AAN41691.1AAN41687.1AAN41686.1AAN41689.1AAN41688.1
SENT454169 SEHA_C0053SEHA_C0052SEHA_C0048SEHA_C0047SEHA_C0050SEHA_C0049
SENT321314 SCH_0043SCH_0042SCH_0039SCH_0037SCH_0041SCH_0040
SENT295319 SPA0050SPA0049SPA0046SPA0044SPA0048SPA0047
SENT220341 STY0058STY0057STY0054STY0052STY0056STY0055
SENT209261 T0051T0050T0047T0045T0049T0048
SDYS300267 SDY_0051SDY_0050SDY_0047SDY_0045SDY_0049SDY_0048
SDEN318161 SDEN_2720SDEN_2721SDEN_2724SDEN_2726SDEN_2722SDEN_2723
SDEG203122 SDE_2563SDE_2564SDE_2567SDE_1013SDE_2565SDE_2566
SBOY300268 SBO_0028SBO_0027SBO_0024SBO_0022SBO_0026SBO_0025
SBAL402882 SHEW185_1124SHEW185_1123SHEW185_1120SHEW185_1118SHEW185_1122SHEW185_1121
SBAL399599 SBAL195_1159SBAL195_1158SBAL195_1155SBAL195_1152SBAL195_1157SBAL195_1156
SALA317655 SALA_1136SALA_2358SALA_3188SALA_2356SALA_2357
SACI56780 SYN_02454SYN_01948SYN_02376SYN_01453SYN_01454
RSOL267608 RSC2442RSC2443RSC2457RSC2556RSC2459
RRUB269796 RRU_A0059RRU_A2965RRU_A3802RRU_A2967RRU_A2966
RPOM246200 SPO_3207SPO_A0438SPO_3154SPO_0148SPO_3373SPO_3136
RPAL316058 RPB_1729RPB_4186RPB_4712RPB_4181RPB_4182
RPAL316057 RPD_3570RPD_4040RPD_4421RPD_4037RPD_4038
RPAL316055 RPE_1816RPE_1410RPE_4920RPE_1415RPE_1414
RPAL258594 RPA3734RPA4379RPA4836RPA4376RPA4377
RMET266264 RMET_2868RMET_2869RMET_2884RMET_2904RMET_2886RMET_2885
RLEG216596 RL1030RL0886RL0374RL0410RL0889
RFER338969 RFER_3248RFER_3249RFER_1433RFER_2122RFER_1431RFER_1432
REUT381666 H16_A3031H16_A3032H16_A3045H16_A3065H16_A3047H16_A3046
REUT264198 REUT_A2730REUT_A2731REUT_A2744REUT_A2765REUT_A2746REUT_A2745
RETL347834 RHE_CH00961RHE_CH00831RHE_CH00357RHE_CH00392RHE_CH00832
RDEN375451 RD1_1355RD1_3928RD1_3523RD1_0207RD1_2074
PTHE370438 PTH_1619PTH_1273PTH_0869PTH_1819PTH_1820
PSYR223283 PSPTO_0809PSPTO_0808PSPTO_0805PSPTO_0802PSPTO_0807PSPTO_0806
PSYR205918 PSYR_0713PSYR_0712PSYR_0709PSYR_0707PSYR_0711PSYR_0710
PSTU379731 PST_0967PST_0966PST_0963PST_0961PST_0965PST_0964
PSP56811 PSYCPRWF_0578PSYCPRWF_1864PSYCPRWF_0627PSYCPRWF_0947PSYCPRWF_1893PSYCPRWF_1892
PSP312153 PNUC_1731PNUC_1732PNUC_1739PNUC_1756PNUC_1741
PSP296591 BPRO_0951BPRO_0950BPRO_3848BPRO_3570BPRO_3850
PPUT76869 PPUTGB1_0652PPUTGB1_0651PPUTGB1_0648PPUTGB1_0646PPUTGB1_0650PPUTGB1_0649
PPUT351746 PPUT_0647PPUT_0646PPUT_0643PPUT_0641PPUT_0645PPUT_0644
PPUT160488 PP_0606PP_0605PP_0602PP_0600PP_0604PP_0603
PPRO298386 PBPRA0594PBPRA0593PBPRA0590PBPRA0587PBPRA0592PBPRA0591
PNAP365044 PNAP_3337PNAP_3338PNAP_3228PNAP_3009PNAP_3230PNAP_3229
PMUL272843 PM1664PM1567PM1661PM1659PM1663PM1662
PMEN399739 PMEN_0956PMEN_0955PMEN_0952PMEN_0950PMEN_0954PMEN_0953
PLUM243265 PLU0594PLU0593PLU0590PLU0589PLU0592PLU0591
PING357804 PING_3268PING_3269PING_3272PING_3274PING_3270PING_3271
PHAL326442 PSHAA0921PSHAA0920PSHAA0917PSHAA0914PSHAA0919PSHAA0918
PFLU220664 PFL_5318PFL_5319PFL_5322PFL_5324PFL_5320PFL_5321
PFLU216595 PFLU0771PFLU0770PFLU0767PFLU0765PFLU0769PFLU0768
PFLU205922 PFL_4849PFL_4850PFL_4853PFL_4855PFL_4851PFL_4852
PENT384676 PSEEN4689PSEEN4690PSEEN4693PSEEN4695PSEEN4691PSEEN4692
PCRY335284 PCRYO_2002PCRYO_0399PCRYO_2042PCRYO_1667PCRYO_1352PCRYO_0402
PCAR338963 PCAR_1883PCAR_2076PCAR_2151PCAR_1416PCAR_2454PCAR_2455
PATL342610 PATL_3175PATL_3176PATL_3179PATL_3181PATL_3177PATL_3178
PARC259536 PSYC_1722PSYC_0358PSYC_1761PSYC_1487PSYC_0363PSYC_0364
PAER208964 PA4557PA4558PA4561PA4563PA4559PA4560
PAER208963 PA14_60330PA14_60350PA14_60380PA14_60400PA14_60360PA14_60370
OCAR504832 OCAR_6667OCAR_7232OCAR_4540OCAR_7236OCAR_7234
OANT439375 OANT_0589OANT_3030OANT_0002OANT_0161OANT_3032
NOCE323261 NOC_1744NOC_1086NOC_2035NOC_3037NOC_2276NOC_2277
NMUL323848 NMUL_A0089NMUL_A2653NMUL_A1037NMUL_A2655NMUL_A2654
NMEN374833 NMCC_0391NMCC_0388NMCC_1679NMCC_0390NMCC_0389
NMEN272831 NMC0385NMC0382NMC1688NMC0384NMC0383
NMEN122587 NMA0624NMA0621NMA2022NMA0623NMA0622
NMEN122586 NMB_1831NMB_1834NMB_0463NMB_1832NMB_1833
NHAM323097 NHAM_2679NHAM_3161NHAM_4039NHAM_3163NHAM_3162
NGON242231 NGO0072NGO0068NGO1493NGO0071NGO0069
NEUT335283 NEUT_1903NEUT_1440NEUT_1673NEUT_1438NEUT_1439
NEUR228410 NE0649NE1150NE2340NE1148NE1149
NARO279238 SARO_1087SARO_3260SARO_3338SARO_3258SARO_3259
MSUC221988 MS1749MS2199MS1752MS1756MS1750MS1751
MSP409 M446_6025M446_2222M446_6963M446_2219M446_2220
MSP400668 MMWYL1_4227MMWYL1_4228MMWYL1_4231MMWYL1_4233MMWYL1_4229MMWYL1_4230
MSP266779 MESO_0748MESO_1471MESO_0424MESO_4102MESO_3678MESO_0425
MPET420662 MPE_A2693MPE_A2694MPE_A3045MPE_A3027MPE_A3047MPE_A3046
MMAR394221 MMAR10_2215MMAR10_0612MMAR10_3079MMAR10_2334MMAR10_0613
MLOT266835 MLR7502MLR8243MLL5582MLR3211MLR8250
MFLA265072 MFLA_2431MFLA_2209MFLA_2211MFLA_2207MFLA_2208
MEXT419610 MEXT_2593MEXT_0420MEXT_4890MEXT_2326MEXT_2325
MCAP243233 MCA_1815MCA_0081MCA_2252MCA_2250MCA_2254MCA_2253
MAQU351348 MAQU_0865MAQU_0864MAQU_0861MAQU_0859MAQU_0863MAQU_0862
LMON265669 LMOF2365_1470LMOF2365_1346LMOF2365_1499LMOF2365_1872LMOF2365_2044
LMON169963 LMO1451LMO1329LMO1480LMO1844LMO2019
LINT267671 LIC_11529LIC_11731LIC_10728LIC_10448LIC_12400
LINT189518 LA2420LA2194LA3448LA3798LA1325
LCHO395495 LCHO_0693LCHO_0694LCHO_1237LCHO_0669LCHO_1234LCHO_1236
LBOR355276 LBL_1476LBL_1582LBL_2434LBL_2712LBL_0837
LBIF456481 LEPBI_I1588LEPBI_I3126LEPBI_I3078LEPBI_I0515LEPBI_I2290
LBIF355278 LBF_1537LBF_3017LBF_2969LBF_0495LBF_2221
KPNE272620 GKPORF_B4289GKPORF_B4288GKPORF_B4285GKPORF_B4284GKPORF_B4287GKPORF_B4286
JSP375286 MMA_2549MMA_2550MMA_0829MMA_2519MMA_0827MMA_0828
ILOI283942 IL1125IL1126IL1129IL1131IL1127IL1128
HSOM228400 HSM_0050HSM_0378HSM_0056HSM_0741HSM_0051HSM_0054
HSOM205914 HS_0184HS_1631HS_0188HS_0416HS_0185HS_0186
HNEP81032 HNE_2713HNE_0897HNE_0844HNE_0565HNE_1728
HMOD498761 HM1_1931HM1_2318HM1_2427HM1_2103HM1_2096
HINF71421 HI_1007HI_0699HI_0963HI_0965HI_1006
HINF374930 CGSHIEE_06935CGSHIEE_08645CGSHIEE_07145CGSHIEE_07130CGSHIEE_07150
HINF281310 NTHI1182NTHI0822NTHI1136NTHI1139NTHI1181NTHI1135
HHAL349124 HHAL_1834HHAL_0168HHAL_1837HHAL_1843HHAL_1835HHAL_1836
HDUC233412 HD_0064HD_0202HD_0273HD_1990HD_0063HD_0272
HCHE349521 HCH_05930HCH_05931HCH_05934HCH_05937HCH_05932HCH_05933
HARS204773 HEAR2466HEAR2467HEAR0846HEAR2451HEAR0520HEAR0845
GURA351605 GURA_1466GURA_0178GURA_2686GURA_3131GURA_4314GURA_4313
GTHE420246 GTNG_2414GTNG_1121GTNG_2448GTNG_1002GTNG_1001
GSUL243231 GSU_2604GSU_0383GSU_1487GSU_2206GSU_3135GSU_3136
GMET269799 GMET_0866GMET_3146GMET_1388GMET_2297GMET_0352GMET_0351
GKAU235909 GK2477GK1267GK2512GK1145GK1136
GBET391165 GBCGDNIH1_1875GBCGDNIH1_0467GBCGDNIH1_0160GBCGDNIH1_0465GBCGDNIH1_0466
FTUL458234 FTA_0348FTA_0347FTA_0459FTA_0078FTA_0456FTA_0458
FTUL418136 FTW_1353FTW_1354FTW_1263FTW_1938FTW_1265FTW_1264
FTUL401614 FTN_0348FTN_0347FTN_0442FTN_0106FTN_0440FTN_0441
FTUL393115 FTF0833FTF0832FTF0916CFTF1679FTF0914CFTF0915C
FTUL393011 FTH_0325FTH_0324FTH_0429FTH_0066FTH_0427FTH_0428
FTUL351581 FTL_0327FTL_0326FTL_0437FTL_0070FTL_0435FTL_0436
FRANT ISPHFKPBRIBFRPSTLSPAILES
FPHI484022 FPHI_0475FPHI_0476FPHI_0395FPHI_0721FPHI_0398FPHI_0396
ESP42895 ENT638_0587ENT638_0586ENT638_0583ENT638_0582ENT638_0585ENT638_0584
ELIT314225 ELI_01560ELI_03005ELI_13560ELI_10560ELI_04470ELI_13550
EFER585054 EFER_0022EFER_0021EFER_0017EFER_0015EFER_0020EFER_0018
ECOO157 LYTBSLPARIBFRPSTLSPAILES
ECOL83334 ECS0032ECS0031ECS0028ECS0026ECS0030ECS0029
ECOL585397 ECED1_0026ECED1_0025ECED1_0022ECED1_0020ECED1_0024ECED1_0023
ECOL585057 ECIAI39_0030ECIAI39_0029ECIAI39_0026ECIAI39_0025ECIAI39_0028ECIAI39_0027
ECOL585056 ECUMN_0030ECUMN_0029ECUMN_0025ECUMN_0023ECUMN_0028ECUMN_0026
ECOL585055 EC55989_0028EC55989_0027EC55989_0024EC55989_0022EC55989_0026EC55989_0025
ECOL585035 ECS88_0028ECS88_0027ECS88_0024ECS88_0022ECS88_0026ECS88_0025
ECOL585034 ECIAI1_0030ECIAI1_0029ECIAI1_0026ECIAI1_0024ECIAI1_0028ECIAI1_0027
ECOL481805 ECOLC_3626ECOLC_3627ECOLC_3630ECOLC_3631ECOLC_3628ECOLC_3629
ECOL469008 ECBD_3587ECBD_3588ECBD_3591ECBD_3593ECBD_3589ECBD_3590
ECOL439855 ECSMS35_0027ECSMS35_0026ECSMS35_0023ECSMS35_0022ECSMS35_0025ECSMS35_0024
ECOL413997 ECB_00033ECB_00032ECB_00029ECB_00027ECB_00031ECB_00030
ECOL409438 ECSE_0027ECSE_0026ECSE_0023ECSE_0021ECSE_0025ECSE_0024
ECOL405955 APECO1_1954APECO1_1955APECO1_1958APECO1_1956APECO1_1957
ECOL364106 UTI89_C0031UTI89_C0030UTI89_C0027UTI89_C0025UTI89_C0029UTI89_C0028
ECOL362663 ECP_0027ECP_0026ECP_0023ECP_0022ECP_0025ECP_0024
ECOL331111 ECE24377A_0029ECE24377A_0028ECE24377A_0025ECE24377A_0023ECE24377A_0027ECE24377A_0026
ECOL316407 ECK0030:JW0027:B0029ECK0029:JW0026:B0028ECK0026:JW0023:B0025ECK0024:JW0022:B0023ECK0028:JW0025:B0027ECK0027:JW0024:B0026
ECOL199310 C0033C0032C0029C0027C0031C0030
ECAR218491 ECA3873ECA3874ECA3877ECA3878ECA3875ECA3876
DVUL882 DVU_2569DVU_0450DVU_1896DVU_1928DVU_1927
DSHI398580 DSHI_0188DSHI_2927DSHI_3371DSHI_3952DSHI_1933
DRED349161 DRED_1154DRED_1953DRED_2505DRED_1688DRED_0718
DPSY177439 DP2166DP2641DP1094DP1618DP2551DP2552
DOLE96561 DOLE_0383DOLE_0174DOLE_2234DOLE_2436DOLE_1190DOLE_1191
DHAF138119 DSY2255DSY2513DSY3145DSY2866DSY2882
DARO159087 DARO_3043DARO_3044DARO_3047DARO_3035DARO_2630DARO_3046
CVIO243365 CV_3567CV_2829CV_3570CV_3747CV_3568CV_3569
CVES412965 COSY_0924COSY_0925COSY_0016COSY_0693COSY_0599COSY_0322
CSP78 CAUL_4391CAUL_4052CAUL_5079CAUL_4058CAUL_4057
CSP501479 CSE45_0270CSE45_4190CSE45_0133CSE45_3475CSE45_0589
CSAL290398 CSAL_0484CSAL_0483CSAL_0480CSAL_0478CSAL_0482CSAL_0481
CRUT413404 RMAG_1023RMAG_0016RMAG_0749RMAG_0652RMAG_0340
CPSY167879 CPS_1211CPS_1184CPS_1181CPS_1179CPS_1183CPS_1182
CJAP155077 CJA_3214CJA_3215CJA_3218CJA_0852CJA_3216CJA_3217
CHYD246194 CHY_1925CHY_1762CHY_0406CHY_1506CHY_0534
CBLO291272 BPEN_124BPEN_121BPEN_120BPEN_123BPEN_122
CAULO CC3361CC0703CC0007CC0700CC0701
BWEI315730 BCERKBAB4_4140BCERKBAB4_3631BCERKBAB4_4173BCERKBAB4_3720BCERKBAB4_3722
BVIE269482 BCEP1808_2577BCEP1808_2578BCEP1808_2589BCEP1808_2644BCEP1808_2591BCEP1808_2590
BTRI382640 BT_0655BT_1685BT_0127BT_0010BT_0285
BTHU412694 BALH_3881BALH_3437BALH_3911BALH_3524BALH_3526
BTHU281309 BT9727_4028BT9727_3550BT9727_4059BT9727_3635BT9727_3637
BTHA271848 BTH_I0783BTH_I0782BTH_I0771BTH_I0735BTH_I0769BTH_I0770
BSUI470137 BSUIS_A0502BSUIS_B0204BSUIS_A2023BSUIS_A0150BSUIS_B0205
BSUI204722 BR_0475BR_A0201BR_2185BR_0149BR_A0202
BSUB BSU25160BSU16670BSU25550BSU15450BSU15430
BSP376 BRADO2632BRADO6066BRADO7143BRADO6068BRADO6067
BSP36773 BCEP18194_A5831BCEP18194_A5832BCEP18194_A5843BCEP18194_A5883BCEP18194_A5845BCEP18194_A5844
BSP107806 BU147BU150BU151BU148BU149
BQUI283165 BQ03600BQ10470BQ01100BQ00090BQ02440
BPUM315750 BPUM_2249BPUM_1570BPUM_2288BPUM_1444BPUM_1442
BPSE320373 BURPS668_0981BURPS668_0980BURPS668_0968BURPS668_0919BURPS668_0966BURPS668_0967
BPSE320372 BURPS1710B_A1195BURPS1710B_A1194BURPS1710B_A1182BURPS1710B_A1134BURPS1710B_A1180BURPS1710B_A1181
BPSE272560 BPSL0919BPSL0918BPSL0907BPSL0871BPSL0905BPSL0906
BPET94624 BPET3147BPET3148BPET2813BPET2677BPET2815BPET2814
BPER257313 BP1237BP1236BP1754BP2773BP1752BP1753
BPAR257311 BPP1852BPP1851BPP1985BPP2556BPP1983BPP1984
BOVI236 GBOORF0504GBOORFA0197GBOORF2178GBOORF0154GBOORFA0198
BMEL359391 BAB1_0501BAB2_0193BAB1_2186BAB1_0148BAB2_0194
BMEL224914 BMEI1459BMEII1044BMEI1944BMEI1799BMEII1043
BMAL320389 BMA10247_2097BMA10247_2098BMA10247_2111BMA10247_0126BMA10247_2113BMA10247_A1373
BMAL320388 BMASAVP1_A2644BMASAVP1_A2645BMASAVP1_A2657BMASAVP1_A0677BMASAVP1_A2659BMASAVP1_A2658
BMAL243160 BMA_2228BMA_2229BMA_2241BMA_0377BMA_2243BMA_2242
BLIC279010 BL03721BL01220BL02113BL02269BL02267
BJAP224911 BLL3007BLR7480BSL0832BLR7482BLR7481
BHEN283166 BH04410BH13220BH01170BH00100BH02580
BHAL272558 BH1382BH2409BH1339BH2543BH2545
BCLA66692 ABC1694ABC2224ABC1651ABC2340ABC2342
BCIC186490 BCI_0558BCI_0555BCI_0554BCI_0557BCI_0556
BCER572264 BCA_4399BCA_3905BCA_4433BCA_3997BCA_3999
BCER405917 BCE_4368BCE_3847BCE_4403BCE_3938BCE_3940
BCER315749 BCER98_3015BCER98_2461BCER98_3049BCER98_2542BCER98_2544
BCER288681 BCE33L4038BCE33L3568BCE33L4069BCE33L3652BCE33L3654
BCEN331272 BCEN2424_2499BCEN2424_2500BCEN2424_2511BCEN2424_2551BCEN2424_2513BCEN2424_2512
BCEN331271 BCEN_1888BCEN_1889BCEN_1900BCEN_1939BCEN_1902BCEN_1901
BCAN483179 BCAN_A0482BCAN_B0199BCAN_A2227BCAN_A0154BCAN_B0200
BBRO257310 BB3256BB3257BB2173BB2001BB2171BB2172
BBAC360095 BARBAKC583_0406BARBAKC583_1163BARBAKC583_1281BARBAKC583_1375BARBAKC583_1212
BAPH198804 BUSG140BUSG143BUSG144BUSG141BUSG142
BANT592021 BAA_4532BAA_3970BAA_4566BAA_4058BAA_4060
BANT568206 BAMEG_4550BAMEG_0685BAMEG_4584BAMEG_0595BAMEG_0593
BANT261594 GBAA4511GBAA3946GBAA4547GBAA4032GBAA4034
BANT260799 BAS4190BAS3660BAS4221BAS3744BAS3746
BAMY326423 RBAM_023470RBAM_016510RBAM_023850RBAM_015280RBAM_015260
BAMB398577 BAMMC406_2417BAMMC406_2418BAMMC406_2429BAMMC406_2470BAMMC406_2431BAMMC406_2430
BAMB339670 BAMB_2546BAMB_2547BAMB_2558BAMB_2600BAMB_2560BAMB_2559
BABO262698 BRUAB1_0497BRUAB2_0196BRUAB1_2158BRUAB1_0145BRUAB2_0197
ASP76114 EBA4444EBB150EBA4449EBB177EBA4447EBA4448
ASP62977 ACIAD3322ACIAD0020ACIAD0023ACIAD1389ACIAD0021ACIAD0022
ASP62928 AZO1202AZO1203AZO1206AZO2190AZO1204AZO1205
ASP232721 AJS_3448AJS_3449AJS_3398AJS_3000AJS_3400AJS_3399
ASAL382245 ASA_0687ASA_0686ASA_0683ASA_0681ASA_0685ASA_0684
APLE434271 APJL_1546APJL_1478APJL_0046APJL_1586APJL_1545APJL_0045
APLE416269 APL_1520APL_1456APL_0045APL_1558APL_1519APL_0044
AHYD196024 AHA_0685AHA_0684AHA_0681AHA_0679AHA_0683AHA_0682
AFER243159 AFE_3075AFE_2846AFE_2481AFE_0909AFE_2483AFE_2482
AEHR187272 MLG_0854MLG_2415MLG_0851MLG_0849MLG_0853MLG_0852
ACRY349163 ACRY_1832ACRY_0583ACRY_3104ACRY_0632ACRY_0633
ABOR393595 ABO_0462ABO_0461ABO_0458ABO_0456ABO_0460ABO_0459
ABAU360910 BAV2403BAV2404BAV1412BAV2107BAV1410BAV1411
AAVE397945 AAVE_3771AAVE_3772AAVE_3449AAVE_1167AAVE_3451AAVE_3450


Organism features enriched in list (features available for 253 out of the 272 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00022622592
Disease:Bubonic_plague 0.006456366
Disease:Dysentery 0.006456366
Endospores:No 1.267e-1350211
GC_Content_Range4:0-40 7.452e-2140213
GC_Content_Range4:40-60 1.206e-9132224
GC_Content_Range4:60-100 0.000181281145
GC_Content_Range7:0-30 5.838e-9347
GC_Content_Range7:30-40 2.064e-1137166
GC_Content_Range7:50-60 2.932e-1177107
GC_Content_Range7:60-70 2.921e-681134
Genome_Size_Range5:0-2 6.905e-2219155
Genome_Size_Range5:2-4 0.002638471197
Genome_Size_Range5:4-6 9.785e-23134184
Genome_Size_Range5:6-10 0.00393552947
Genome_Size_Range9:0-1 0.0010566427
Genome_Size_Range9:1-2 4.405e-1815128
Genome_Size_Range9:2-3 0.000011732120
Genome_Size_Range9:4-5 2.846e-86696
Genome_Size_Range9:5-6 2.132e-126888
Genome_Size_Range9:6-8 0.00025722738
Gram_Stain:Gram_Neg 5.769e-30210333
Gram_Stain:Gram_Pos 4.183e-1723150
Habitat:Host-associated 0.006661877206
Habitat:Multiple 0.000732894178
Habitat:Specialized 0.00057511253
Motility:No 1.060e-1328151
Motility:Yes 2.593e-12157267
Optimal_temp.:- 0.0003158131257
Optimal_temp.:25-30 0.00022831619
Optimal_temp.:30-37 0.0028713218
Optimal_temp.:35-37 0.00001621313
Optimal_temp.:37 0.000185630106
Oxygen_Req:Aerobic 0.001365896185
Oxygen_Req:Anaerobic 5.933e-919102
Oxygen_Req:Facultative 0.0001718107201
Shape:Coccus 1.042e-81382
Shape:Rod 6.753e-20203347
Shape:Sphere 0.0017835219
Temp._range:Hyperthermophilic 0.0000277123
Temp._range:Mesophilic 0.0060794216473
Temp._range:Psychrophilic 0.000502999
Temp._range:Thermophilic 0.0005540635



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 129
Effective number of orgs (counting one per cluster within 468 clusters): 114

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSOL273057 ncbi Sulfolobus solfataricus P21
SMAR399550 ncbi Staphylothermus marinus F11
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT31
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP103690 ncbi Nostoc sp. PCC 71201
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
ECAN269484 ncbi Ehrlichia canis Jake1
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1350
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACEL351607 ncbi Acidothermus cellulolyticus 11B1


Names of the homologs of the genes in the group in each of these orgs
  EG11081   EG11080   EG11079   EG10919   EG10548   EG10492   
UURE95667
UURE95664
UPAR505682
UMET351160 LRC434
TVOL273116
TPEN368408 TPEN_0305
TPAL243276 TP_0349
TLET416591 TLET_0382
TKOD69014 TK1850
TDEN243275 TDE_1925
TACI273075
STOK273063
SSP84588 SYNW1603OR0525
SSP64471 GSYN0840
SSOL273057 SSO0758
SMAR399550 SMAR_0940
SACI330779 SACI_0641
RTYP257363
RRIC452659 RRIOWA_0664
RRIC392021 A1G_03150
RPRO272947
RMAS416276 RMA_0575
RFEL315456
RCON272944 RC0558
RCAN293613 A1E_03340
RBEL391896 A1I_02465
RBEL336407 RBE_0886
RALB246199 GRAORF_1913
RAKA293614 A1C_03040
PTOR263820
PPEN278197 PEPE_1179
PMAR93060 P9215_09761
PMAR74547 PMT0364
PMAR74546 PMT9312_0885
PMAR59920 PMN2A_1018
PMAR167555 NATL1_18881
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891 A9601_09461
PISL384616 PISL_1096
PINT246198 PIN_A0443
PHOR70601 PH1399
PFUR186497 PF1401
PAST100379 PAM184
PARS340102
PAER178306
PABY272844 PAB1864
OTSU357244 OTBS_0351
NSP103690 ALR4577
NPHA348780 NP2228A
MTHE349307 MTHE_1547
MTHE187420 MTH1125
MSYN262723 MS53_0558
MSTA339860 MSP_0325
MSED399549 MSED_2256
MPUL272635
MPNE272634
MPEN272633 MYPE1330
MMYC272632 MSC_0086
MMOB267748 MMOB5200
MMAZ192952 MM0382
MMAR444158 MMARC6_1483
MMAR426368 MMARC7_0437
MMAR402880 MMARC5_0400
MMAR368407 MEMAR_1765
MMAR267377 MMP1190
MLAB410358 MLAB_0477
MKAN190192 MK1231
MJAN243232 MJ_0278
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_2290
MGEN243273
MFLO265311 MFL368.1
MBUR259564 MBUR_2255
MBAR269797 MBAR_A1941
MART243272
MAEO419665 MAEO_1329
MACE188937 MA3136
LREU557436 LREU_0598
LPLA220668 LP_2187
LMES203120 LEUM_1487
LJOH257314 LJ_0980
IHOS453591 IGNI_0058
HWAL362976 HQ3692A
HSP64091
HSAL478009
HMUK485914
HMAR272569 RRNAC0638
HBUT415426 HBUT_1557
HAUR316274 HAUR_0245
FJOH376686 FJOH_0799
ECAN269484 ECAJ_0526
DETH243164 DET_0602
CTRA471473 CTLON_0234
CTRA471472 CTL0234
CTET212717 CTC_01615
CSUL444179
CPRO264201 PC1078
CPNE182082 CPB1055
CPNE138677 CPJ1017
CPNE115713 CPN1017
CPNE115711 CP_0836
CMUR243161 TC_0249
CMET456442 MBOO_1327
CMAQ397948 CMAQ_0459
CKOR374847 KCR_1408
CFEL264202 CF0272
CCAV227941 CCA_00744
CBOT508765 CLL_A0883
CBEI290402 CBEI_0821
CABO218497 CAB711
BTUR314724
BHER314723
BGAR290434
BFRA295405 BF4346
BFRA272559 BF4147
BBUR224326
BAFZ390236
AYEL322098 AYWB_535
AVAR240292 AVA_2475
AURANTIMONAS
APER272557
ALAI441768 ACL_0892
AFUL224325 AF_1989
ACEL351607 ACEL_1858


Organism features enriched in list (features available for 122 out of the 129 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0001412792
Arrangment:Pairs 0.000125310112
Disease:Pharyngitis 3.053e-688
Disease:Rocky_Mountain_Spotted_Fever 0.008985833
Disease:bronchitis_and_pneumonitis 3.053e-688
Endospores:No 0.000080462211
Endospores:Yes 0.0012126353
GC_Content_Range4:0-40 7.142e-870213
GC_Content_Range4:60-100 6.433e-98145
GC_Content_Range7:0-30 2.536e-72547
GC_Content_Range7:30-40 0.006499945166
GC_Content_Range7:60-70 8.807e-88134
Genome_Size_Range5:0-2 2.567e-2580155
Genome_Size_Range5:2-4 0.007439431197
Genome_Size_Range5:4-6 2.087e-147184
Genome_Size_Range9:0-1 1.529e-71827
Genome_Size_Range9:1-2 4.502e-1662128
Genome_Size_Range9:3-4 0.0006554677
Genome_Size_Range9:4-5 7.798e-8396
Genome_Size_Range9:5-6 3.691e-6488
Gram_Stain:Gram_Neg 0.000024750333
Gram_Stain:Gram_Pos 5.206e-810150
Habitat:Aquatic 0.00010293391
Habitat:Multiple 7.286e-913178
Habitat:Specialized 0.00057692153
Habitat:Terrestrial 0.0048617131
Optimal_temp.:100 0.008985833
Optimal_temp.:35-40 0.008985833
Optimal_temp.:85 0.001843644
Oxygen_Req:Aerobic 0.000823725185
Oxygen_Req:Anaerobic 4.384e-639102
Oxygen_Req:Facultative 0.000032124201
Pathogenic_in:Human 0.004062233213
Pathogenic_in:No 0.006989658226
Salinity:Extreme_halophilic 0.005017157
Shape:Irregular_coccus 8.228e-111617
Shape:Oval 0.007339645
Shape:Pleomorphic 0.001358868
Shape:Rod 3.231e-1239347
Shape:Sphere 5.302e-81519
Temp._range:Hyperthermophilic 2.502e-91823
Temp._range:Mesophilic 0.000036683473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00575657326


Names of the homologs of the genes in the group in each of these orgs
  EG11081   EG11080   EG11079   EG10919   EG10548   EG10492   
CVES412965 COSY_0924COSY_0925COSY_0016COSY_0693COSY_0599COSY_0322


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462090.6727
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951750.6272
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002270.6219
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862180.6049
PWY-1269 (CMP-KDO biosynthesis I)3252350.6032
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181840.6027
PWY-5918 (heme biosynthesis I)2722100.5954
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912180.5900
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962190.5818
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251840.5779
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902130.5605
TYRFUMCAT-PWY (tyrosine degradation I)1841590.5581
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491380.5534
PWY-4041 (γ-glutamyl cycle)2792060.5479
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482360.5479
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831560.5408
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392300.5328
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911580.5237
PWY-5913 (TCA cycle variation IV)3012120.5219
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551900.5178
PWY-5340 (sulfate activation for sulfonation)3852450.5123
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222580.5106
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162550.5042
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652360.5036
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262190.4968
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982470.4934
PWY-5386 (methylglyoxal degradation I)3052090.4910
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911520.4816
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292170.4756
AST-PWY (arginine degradation II (AST pathway))1201100.4728
PWY-5028 (histidine degradation II)1301160.4718
PWY-5148 (acyl-CoA hydrolysis)2271690.4700
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112080.4675
DAPLYSINESYN-PWY (lysine biosynthesis I)3422200.4597
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491780.4578
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491780.4578
VALDEG-PWY (valine degradation I)2901970.4567
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582620.4550
PWY-561 (superpathway of glyoxylate cycle)1621320.4521
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96920.4490
REDCITCYC (TCA cycle variation II)1741380.4475
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761390.4468
GLYOXYLATE-BYPASS (glyoxylate cycle)1691350.4456
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561270.4399
PWY-5194 (siroheme biosynthesis)3122040.4387
PWY-6196 (serine racemization)102940.4327
GALACTARDEG-PWY (D-galactarate degradation I)1511230.4310
LIPASYN-PWY (phospholipases)2121550.4265
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351130.4247
GLUCONSUPER-PWY (D-gluconate degradation)2291630.4230
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112990.4223
PWY0-501 (lipoate biosynthesis and incorporation I)3852310.4190
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381140.4189
KDOSYN-PWY (KDO transfer to lipid IVA I)1801370.4171
PROSYN-PWY (proline biosynthesis I)4752620.4153
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891900.4142
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791360.4137
P344-PWY (acrylonitrile degradation)2101520.4129
GLUCARDEG-PWY (D-glucarate degradation I)1521210.4117
PWY-5938 ((R)-acetoin biosynthesis I)3762260.4091
PWY-5188 (tetrapyrrole biosynthesis I)4392490.4067
PWY-3162 (tryptophan degradation V (side chain pathway))94860.4065
GALACTCAT-PWY (D-galactonate degradation)104920.4044
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832280.4042
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001930.4017
P601-PWY (D-camphor degradation)95860.4008
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81770.4007



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11080   EG11079   EG10919   EG10548   EG10492   
EG110810.9997520.9994970.9993310.9996120.999555
EG110800.99950.9993090.9996380.999551
EG110790.9994960.9998570.999913
EG109190.9994640.999452
EG105480.999946
EG10492



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PAIRWISE BLAST SCORES:

  EG11081   EG11080   EG11079   EG10919   EG10548   EG10492   
EG110810.0f0-----
EG11080-0.0f0----
EG11079--0.0f0---
EG10919---0.0f0--
EG10548----0.0f0-
EG10492-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10492 EG10548 EG10919 EG11079 EG11080 EG11081 (centered at EG10548)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11081   EG11080   EG11079   EG10919   EG10548   EG10492   
380/623271/623411/623416/623388/623400/623
AAEO224324:0:Tyes1127-011491199-
AAUR290340:2:Tyes1203-0655--
AAVE397945:0:Tyes255925602247022492248
ABAC204669:0:Tyes0--1824122123
ABAU360910:0:Tyes10011002269501
ABOR393595:0:Tyes652043
ABUT367737:0:Tyes-1065---0
ACAU438753:0:Tyes1386-0931-4196
ACEL351607:0:Tyes0-----
ACRY349163:8:Tyes1255-025334849
ADEH290397:0:Tyes-1216-2738-0
AEHR187272:0:Tyes515522043
AFER243159:0:Tyes214019131552015541553
AFUL224325:0:Tyes-0----
AHYD196024:0:Tyes652043
ALAI441768:0:Tyes---0--
AMAR234826:0:Tyes0-212---
AMAR329726:9:Tyes-037--1279
AMET293826:0:Tyes0--422170-
ANAE240017:0:Tyes1987-5640--
AORE350688:0:Tyes145-115-0-
APHA212042:0:Tyes0-737-736-
APLE416269:0:Tyes150414351155115030
APLE434271:0:Tno149914261154914980
ASAL382245:5:Tyes652043
ASP1667:3:Tyes1415-0810--
ASP232721:2:Tyes4304313850387386
ASP62928:0:Tyes014100923
ASP62977:0:Tyes307503129812
ASP76114:2:Tyes01438223
AVAR240292:3:Tyes----0-
AYEL322098:4:Tyes-----0
BABO262698:0:Tno--0--1
BABO262698:1:Tno335--19360-
BAMB339670:3:Tno0112541413
BAMB398577:3:Tno0112531413
BAMY326423:0:Tyes820-12585820
BANT260799:0:Tno528-05598486
BANT261594:2:Tno544-05798284
BANT568206:2:Tyes3869-88390320
BANT592021:2:Tno550-05848486
BAPH198804:0:Tyes0-3412
BAPH372461:0:Tyes---1-0
BBAC264462:0:Tyes-01065-2798-
BBAC360095:0:Tyes0-700808900741
BBRO257310:0:Tyes125412551730171172
BCAN483179:0:Tno--0--1
BCAN483179:1:Tno313--20050-
BCEN331271:2:Tno0112511413
BCEN331272:3:Tyes0112521413
BCER226900:1:Tyes--05048486
BCER288681:0:Tno468-04998486
BCER315749:1:Tyes545-05787981
BCER405917:1:Tyes502-05379193
BCER572264:1:Tno481-05158789
BCIC186490:0:Tyes4-1032
BCLA66692:0:Tyes43-5780694696
BFRA272559:1:Tyes--0---
BFRA295405:0:Tno--0---
BHAL272558:0:Tyes43-1074012081210
BHEN283166:0:Tyes404-1207950232
BJAP224911:0:Fyes2191-6691066936692
BLIC279010:0:Tyes908-12995920
BLON206672:0:Tyes518--0--
BMAL243160:1:Tno162516261637016391638
BMAL320388:1:Tno191619171929019311930
BMAL320389:0:Tyes-----0
BMAL320389:1:Tyes19221923193601938-
BMEL224914:0:Tno--1--0
BMEL224914:1:Tno0--490344-
BMEL359391:0:Tno--0--1
BMEL359391:1:Tno318--18680-
BOVI236:0:Tyes--0--1
BOVI236:1:Tyes300--17500-
BPAR257311:0:Tno10132688130131
BPER257313:0:Tyes104621391460461
BPET94624:0:Tyes4854861410143142
BPSE272560:1:Tyes49483703536
BPSE320372:1:Tno61604804647
BPSE320373:1:Tno60594704546
BPUM315750:0:Tyes796-12783520
BQUI283165:0:Tyes313-916910213
BSP107806:2:Tyes0-3412
BSP36773:2:Tyes0112521413
BSP376:0:Tyes0-3282430132843283
BSUB:0:Tyes1011-130105320
BSUI204722:0:Tyes--0--1
BSUI204722:1:Tyes314--19690-
BSUI470137:0:Tno--0--1
BSUI470137:1:Tno341--18170-
BTHA271848:1:Tno48473603435
BTHE226186:0:Tyes-0472---
BTHU281309:1:Tno476-05078587
BTHU412694:1:Tno432-04618587
BTRI382640:1:Tyes575-14851020238
BVIE269482:7:Tyes0112641413
BWEI315730:4:Tyes501-05338789
BXEN266265:1:Tyes1548---0-
CABO218497:0:Tyes0-----
CACE272562:1:Tyes566--0--
CAULO:0:Tyes3400-7010698699
CBEI290402:0:Tyes---0--
CBLO203907:0:Tyes--1032
CBLO291272:0:Tno4-1032
CBOT36826:1:Tno--93414920-
CBOT441770:0:Tyes--76514030-
CBOT441771:0:Tno---13210-
CBOT441772:1:Tno--89014250-
CBOT498213:1:Tno--84314880-
CBOT508765:1:Tyes---0--
CBOT515621:2:Tyes--104716230-
CBOT536232:0:Tno--96816010-
CBUR227377:1:Tyes--2087
CBUR360115:1:Tno--3098
CBUR434922:2:Tno--4701
CCAV227941:1:Tyes0-----
CCHL340177:0:Tyes-01222---
CCON360104:2:Tyes940---1249
CCUR360105:0:Tyes941094---0
CDES477974:0:Tyes251-01146-487
CDIF272563:1:Tyes513-011771304-
CDIP257309:0:Tyes0--819--
CEFF196164:0:Fyes0-8121188--
CFEL264202:1:Tyes0-----
CFET360106:0:Tyes637891---0
CGLU196627:0:Tyes0-9231296--
CHOM360107:1:Tyes0----414
CHUT269798:0:Tyes-24450---
CHYD246194:0:Tyes1481-131901075125
CJAP155077:0:Tyes231323142317023152316
CJEI306537:0:Tyes909--0--
CJEJ192222:0:Tyes-0---914
CJEJ195099:0:Tno-0---1060
CJEJ354242:2:Tyes-0--230892
CJEJ360109:0:Tyes7500---509
CJEJ407148:0:Tno-0--230925
CKLU431943:1:Tyes---0295-
CKOR374847:0:Tyes-0----
CMAQ397948:0:Tyes-0----
CMET456442:0:Tyes-0----
CMIC31964:2:Tyes616-800--
CMIC443906:2:Tyes694-6060--
CMUR243161:1:Tyes0-----
CNOV386415:0:Tyes0-36405--
CPEL335992:0:Tyes0-33--32
CPER195102:1:Tyes0-598964--
CPER195103:0:Tno0-583936--
CPER289380:3:Tyes0-494848--
CPHY357809:0:Tyes131-4510--
CPNE115711:1:Tyes0-----
CPNE115713:0:Tno0-----
CPNE138677:0:Tno0-----
CPNE182082:0:Tno0-----
CPRO264201:0:Fyes0-----
CPSY167879:0:Tyes3252043
CRUT413404:0:Tyes948-0682601309
CSAL290398:0:Tyes652043
CSP501479:6:Fyes-0----
CSP501479:7:Fyes---0--
CSP501479:8:Fyes134-0--450
CSP78:2:Tyes336-0102765
CTEP194439:0:Tyes-16260---
CTET212717:0:Tyes----0-
CTRA471472:0:Tyes0-----
CTRA471473:0:Tno0-----
CVES412965:0:Tyes8688690650559292
CVIO243365:0:Tyes7740777954775776
DARO159087:0:Tyes4204214244120423
DDES207559:0:Tyes-5361384-10
DETH243164:0:Tyes--0---
DGEO319795:1:Tyes0929794417--
DHAF138119:0:Tyes0-258894611627
DNOD246195:0:Tyes---91210
DOLE96561:0:Tyes21102085228910291030
DPSY177439:2:Tyes11031591054315021503
DRAD243230:3:Tyes113114260---
DRED349161:0:Tyes431-122817899710
DSHI398580:2:Tyes----0-
DSHI398580:5:Tyes0-27783225-1779
DSP216389:0:Tyes--0-630-
DSP255470:0:Tno--0-643-
DVUL882:1:Tyes-21060143914711470
ECAN269484:0:Tyes0-----
ECAR218491:0:Tyes014523
ECHA205920:0:Tyes0-529-528-
ECOL199310:0:Tno652043
ECOL316407:0:Tno652043
ECOL331111:6:Tno652043
ECOL362663:0:Tno541032
ECOL364106:1:Tno652043
ECOL405955:2:Tyes430-21
ECOL409438:6:Tyes652043
ECOL413997:0:Tno652043
ECOL439855:4:Tno541032
ECOL469008:0:Tno014623
ECOL481805:0:Tno014523
ECOL585034:0:Tno652043
ECOL585035:0:Tno652043
ECOL585055:0:Tno652043
ECOL585056:2:Tno652043
ECOL585057:0:Tno541032
ECOL585397:0:Tno652043
ECOL83334:0:Tno652043
ECOLI:0:Tno652043
ECOO157:0:Tno652043
EFAE226185:3:Tyes---13586930
EFER585054:1:Tyes652043
ELIT314225:0:Tyes0292243418275932432
ERUM254945:0:Tyes0-326-325-
ERUM302409:0:Tno0-327-326-
ESP42895:1:Tyes541032
FALN326424:0:Tyes0-4226---
FJOH376686:0:Tyes--0---
FMAG334413:1:Tyes---1540-
FNOD381764:0:Tyes-0---813
FNUC190304:0:Tyes-0-4322321
FPHI484022:1:Tyes8182033321
FRANT:0:Tno10777837576
FSP106370:0:Tyes0-2722---
FSP1855:0:Tyes4446-0907--
FSUC59374:0:Tyes23880----
FTUL351581:0:Tno2382373300328329
FTUL393011:0:Tno2152143020300301
FTUL393115:0:Tyes10777657576
FTUL401614:0:Tyes2402393320330331
FTUL418136:0:Tno7374054521
FTUL458234:0:Tno2382373230321322
GBET391165:0:Tyes1715-3070305306
GFOR411154:0:Tyes-01960---
GKAU235909:1:Tyes1361-131139690
GMET269799:1:Tyes52128021042196210
GOXY290633:5:Tyes0-105823081063-
GSUL243231:0:Tyes221101096181427392740
GTHE420246:1:Tyes1380-116141410
GURA351605:0:Tyes128802503293841154114
GVIO251221:0:Tyes--148-03624
HACI382638:1:Tyes-457---0
HARS204773:0:Tyes1835183630318210302
HAUR316274:2:Tyes--0---
HBUT415426:0:Tyes-0----
HCHE349521:0:Tyes014723
HDUC233412:0:Tyes111918016820179
HHAL349124:0:Tyes168001683168916811682
HHEP235279:0:Tyes-0---773
HINF281310:0:Tyes3270288290326287
HINF374930:0:Tyes03083635-37
HINF71421:0:Tno3060263265305-
HMAR272569:8:Tyes-0----
HMOD498761:0:Tyes0-387520172165
HNEP81032:0:Tyes210633027701146-
HPY:0:Tno0727---1033
HPYL357544:1:Tyes-0---294
HPYL85963:0:Tno-0---263
HSOM205914:1:Tyes01445423512
HSOM228400:0:Tno0335670414
HWAL362976:1:Tyes-0----
IHOS453591:0:Tyes-0----
ILOI283942:0:Tyes014623
JSP290400:1:Tyes0-28903750-2993
JSP375286:0:Tyes174817492171701
KPNE272620:2:Tyes541032
KRAD266940:2:Fyes347-02596--
LACI272621:0:Tyes---233130
LBIF355278:2:Tyes1030248424380-1709
LBIF456481:2:Tno1059257325250-1757
LBOR355276:1:Tyes56565814401683-0
LBOR355277:1:Tno10336250--1438
LBRE387344:2:Tyes---5160564
LCAS321967:1:Tyes--282-1740
LCHO395495:0:Tyes25265710568570
LDEL321956:0:Tyes---241960
LDEL390333:0:Tyes---242040
LGAS324831:0:Tyes----0174
LHEL405566:0:Tyes--357-2910
LINN272626:1:Tno--0149618787
LINT189518:1:Tyes110287521412491-0
LINT267671:1:Tno106812642780-1919
LINT363253:3:Tyes----10
LJOH257314:0:Tyes-----0
LLAC272622:5:Tyes---7750924
LLAC272623:0:Tyes---7420866
LMES203120:1:Tyes-----0
LMON169963:0:Tno122-0151543717
LMON265669:0:Tyes124-0153521693
LPLA220668:0:Tyes-----0
LPNE272624:0:Tno--0169621
LPNE297245:1:Fno--0159021
LPNE297246:1:Fyes--0169421
LPNE400673:0:Tno--1812018101811
LREU557436:0:Tyes-----0
LSAK314315:0:Tyes---3081900
LSPH444177:1:Tyes2114-1452260-0
LWEL386043:0:Tyes--0149519695
LXYL281090:0:Tyes811-0648--
MABS561007:1:Tyes0-1863384--
MACE188937:0:Tyes-0----
MAEO419665:0:Tyes-0----
MAER449447:0:Tyes----01102
MAQU351348:2:Tyes652043
MAVI243243:0:Tyes0-2421529--
MBAR269797:1:Tyes-0----
MBOV233413:0:Tno0-16891307--
MBOV410289:0:Tno0-16471265--
MBUR259564:0:Tyes-0----
MCAP243233:0:Tyes163502052205020542053
MCAP340047:0:Tyes---392-0
MEXT419610:0:Tyes2187-0448319201919
MFLA265072:0:Tyes222-2401
MFLO265311:0:Tyes---0--
MGIL350054:3:Tyes0-1963595--
MHUN323259:0:Tyes-0----
MJAN243232:2:Tyes-0----
MKAN190192:0:Tyes-0----
MLAB410358:0:Tyes-0----
MLEP272631:0:Tyes827-1350--
MLOT266835:2:Tyes3461-4041187204047
MMAG342108:0:Tyes129-1970200-
MMAR267377:0:Tyes-0----
MMAR368407:0:Tyes-0----
MMAR394221:0:Tyes1602-0245317211
MMAR402880:1:Tyes-0----
MMAR426368:0:Tyes-0----
MMAR444158:0:Tyes-0----
MMAZ192952:0:Tyes-0----
MMOB267748:0:Tyes---0--
MMYC272632:0:Tyes---0--
MPEN272633:0:Tyes0-----
MPET420662:1:Tyes01351333353352
MSED399549:0:Tyes-0----
MSME246196:0:Tyes2545-01903--
MSP164756:1:Tno2026-01426--
MSP164757:0:Tno2265-01447--
MSP189918:2:Tyes2057-01450--
MSP266779:3:Tyes32110570369732691
MSP400668:0:Tyes014623
MSP409:2:Tyes3678-3458701
MSTA339860:0:Tyes-0----
MSUC221988:0:Tyes04583712
MSYN262723:0:Tyes-----0
MTBCDC:0:Tno0-17971394--
MTBRV:0:Tno0-16941311--
MTHE187420:0:Tyes-0----
MTHE264732:0:Tyes462-188-50
MTHE349307:0:Tyes-0----
MTUB336982:0:Tno0-16511292--
MTUB419947:0:Tyes0-17531362--
MVAN350058:0:Tyes2270-01543--
MXAN246197:0:Tyes-33515249-34600
NARO279238:0:Tyes0-2212229122102211
NEUR228410:0:Tyes0-5041716502503
NEUT335283:2:Tyes464-223601
NFAR247156:2:Tyes3431-25140--
NGON242231:0:Tyes4-0130031
NHAM323097:2:Tyes0-4461270448447
NMEN122586:0:Tno1317-1320013181319
NMEN122587:0:Tyes3-0132721
NMEN272831:0:Tno3-0113321
NMEN374833:0:Tno3-0127121
NMUL323848:3:Tyes0-254294225442543
NOCE323261:1:Tyes6370920192311651166
NPHA348780:2:Tyes-0----
NSEN222891:0:Tyes0--344--
NSP103690:6:Tyes----0-
NSP35761:1:Tyes0-2122815--
NSP387092:0:Tyes5871138-0-1209
NWIN323098:0:Tyes0-280882-281
OANT439375:4:Tyes--0--2
OANT439375:5:Tyes602--0162-
OCAR504832:0:Tyes2127-2690026942692
OIHE221109:0:Tyes---49810
OTSU357244:0:Fyes---0--
PABY272844:0:Tyes-0----
PACN267747:0:Tyes0-912328--
PAER208963:0:Tyes014623
PAER208964:0:Tno014623
PARC259536:0:Tyes137201411113056
PAST100379:0:Tyes-----0
PATL342610:0:Tyes014623
PCAR338963:0:Tyes478671746010531054
PCRY335284:1:Tyes15970163712629513
PDIS435591:0:Tyes-01018---
PENT384676:0:Tyes014623
PFLU205922:0:Tyes014623
PFLU216595:1:Tyes652043
PFLU220664:0:Tyes014623
PFUR186497:0:Tyes-0----
PGIN242619:0:Tyes-3040---
PHAL326442:1:Tyes652043
PHOR70601:0:Tyes-0----
PING357804:0:Tyes014623
PINT246198:1:Tyes--0---
PISL384616:0:Tyes-0----
PLUM243265:0:Fyes541032
PLUT319225:0:Tyes-014491432--
PMAR146891:0:Tyes----0-
PMAR167555:0:Tyes---0--
PMAR59920:0:Tno---0--
PMAR74546:0:Tyes----0-
PMAR74547:0:Tyes--0---
PMAR93060:0:Tyes----0-
PMEN399739:0:Tyes652043
PMOB403833:0:Tyes1171---01178
PMUL272843:1:Tyes97094929695
PNAP365044:8:Tyes3283292190221220
PPEN278197:0:Tyes-----0
PPRO298386:2:Tyes763054
PPUT160488:0:Tno652043
PPUT351746:0:Tyes652043
PPUT76869:0:Tno652043
PRUM264731:0:Tyes-02021---
PSP117:0:Tyes1227--0--
PSP296591:2:Tyes10287726082879-
PSP312153:0:Tyes0182510-
PSP56811:2:Tyes013015037313301329
PSTU379731:0:Tyes652043
PSYR205918:0:Tyes652043
PSYR223283:2:Tyes763054
PTHE370438:0:Tyes773-4210973974
RAKA293614:0:Fyes----0-
RALB246199:0:Tyes--0---
RBEL336407:0:Tyes----0-
RBEL391896:0:Fno----0-
RCAN293613:0:Fyes----0-
RCAS383372:0:Tyes-22840---
RCON272944:0:Tno----0-
RDEN375451:4:Tyes1071348631050-1756
RETL347834:5:Tyes600-470035471
REUT264198:3:Tyes0114351615
REUT381666:2:Tyes0114341615
RFER338969:1:Tyes18171818269101
RLEG216596:6:Tyes666-523036526
RMAS416276:1:Tyes----0-
RMET266264:2:Tyes0116361817
RPAL258594:0:Tyes0-6471118644645
RPAL316055:0:Tyes402-0347754
RPAL316056:0:Tyes331-43558-0
RPAL316057:0:Tyes0-469854466467
RPAL316058:0:Tyes0-2471299524662467
RPOM246200:0:Tyes-0----
RPOM246200:1:Tyes2992-2939031512921
RRIC392021:0:Fno----0-
RRIC452659:0:Tyes----0-
RRUB269796:1:Tyes0-2896373228982897
RSAL288705:0:Tyes485-01262--
RSOL267608:1:Tyes011511417-
RSP101510:3:Fyes4572-53550--
RSP357808:0:Tyes-021321448--
RSPH272943:4:Tyes0-6542746-1956
RSPH349101:2:Tno295-9790-2229
RSPH349102:5:Tyes2555-21730-492
RXYL266117:0:Tyes--01031387-
SACI330779:0:Tyes-0----
SACI56780:0:Tyes1649-631013491348
SAGA205921:0:Tno--4944477890
SAGA208435:0:Tno--4954498580
SAGA211110:0:Tyes--4863928830
SALA317655:1:Tyes0-1244207712421243
SARE391037:0:Tyes0-5052923--
SAUR158878:1:Tno----30
SAUR158879:1:Tno----30
SAUR196620:0:Tno----30
SAUR273036:0:Tno----20
SAUR282458:0:Tno----30
SAUR282459:0:Tno----20
SAUR359786:1:Tno----20
SAUR359787:1:Tno----20
SAUR367830:3:Tno----20
SAUR418127:0:Tyes----30
SAUR426430:0:Tno----40
SAUR93061:0:Fno----30
SAUR93062:1:Tno----20
SAVE227882:1:Fyes672-03074--
SBAL399599:3:Tyes763054
SBAL402882:1:Tno652043
SBOY300268:1:Tyes652043
SCO:2:Fyes--31870--
SDEG203122:0:Tyes157615771580015781579
SDEN318161:0:Tyes014623
SDYS300267:1:Tyes652043
SELO269084:0:Tyes--0-1368661
SENT209261:0:Tno652043
SENT220341:0:Tno652043
SENT295319:0:Tno652043
SENT321314:2:Tno652043
SENT454169:2:Tno651032
SEPI176279:1:Tyes--80-40
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