CANDIDATE ID: 152

CANDIDATE ID: 152

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9957660e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11967 (flgK) (b1082)
   Products of gene:
     - EG11967-MONOMER (flagellar biosynthesis, hook-filament junction protein 1)
     - CPLX0-7452 (Flagellum)

- EG11654 (fliG) (b1939)
   Products of gene:
     - FLIG-FLAGELLAR-SWITCH-PROTEIN (flagellar motor switch protein FliG)
     - CPLX0-7450 (Flagellar Motor Switch Complex)
     - FLAGELLAR-MOTOR-COMPLEX (Flagellar Motor Complex)
     - CPLX0-7452 (Flagellum)

- EG11545 (flgL) (b1083)
   Products of gene:
     - EG11545-MONOMER (flagellar biosynthesis; hook-filament junction protein)
     - CPLX0-7452 (Flagellum)

- EG11388 (fliS) (b1925)
   Products of gene:
     - EG11388-MONOMER (flagellar biosynthesis protein FliS)

- EG10841 (fliD) (b1924)
   Products of gene:
     - EG10841-MONOMER (flagellar cap protein FliD; filament capping protein; enables filament assembly)
     - CPLX0-7452 (Flagellum)

- EG10321 (fliC) (b1923)
   Products of gene:
     - EG10321-MONOMER (flagellar biosynthesis; flagellin, filament structural protein)
     - CPLX0-7452 (Flagellum)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 221
Effective number of orgs (counting one per cluster within 468 clusters): 156

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
WSUC273121 ncbi Wolinella succinogenes DSM 17406
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB46
TSP28240 Thermotoga sp.6
TSP1755 Thermoanaerobacter sp.6
TROS309801 ncbi Thermomicrobium roseum DSM 51596
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332236
TPET390874 ncbi Thermotoga petrophila RKU-16
TPAL243276 ncbi Treponema pallidum pallidum Nichols6
TMAR243274 ncbi Thermotoga maritima MSB86
TLET416591 ncbi Thermotoga lettingae TMO6
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12515
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TDEN243275 ncbi Treponema denticola ATCC 354055
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-36
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SRUB309807 ncbi Salinibacter ruber DSM 138555
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-15
SLOI323850 ncbi Shewanella loihica PV-46
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SALA317655 ncbi Sphingopyxis alaskensis RB22565
SACI56780 ncbi Syntrophus aciditrophicus SB6
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RMET266264 ncbi Ralstonia metallidurans CH346
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP117 Pirellula sp.5
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PMOB403833 ncbi Petrotoga mobilis SJ956
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
NSP387092 ncbi Nitratiruptor sp. SB155-26
NSP35761 Nocardioides sp.6
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251966
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSP400668 ncbi Marinomonas sp. MWYL16
MPET420662 ncbi Methylibium petroleiphilum PM16
MFLA265072 ncbi Methylobacillus flagellatus KT6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-005
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1305
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566015
LCHO395495 ncbi Leptothrix cholodnii SP-66
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1975
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5505
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)5
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)5
JSP375286 ncbi Janthinobacterium sp. Marseille6
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HPYL85963 ncbi Helicobacter pylori J996
HPYL357544 ncbi Helicobacter pylori HPAG16
HPY ncbi Helicobacter pylori 266956
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HHEP235279 ncbi Helicobacter hepaticus ATCC 514496
HHAL349124 ncbi Halorhodospira halophila SL16
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
HACI382638 ncbi Helicobacter acinonychis Sheeba6
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-26
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B16
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DRED349161 ncbi Desulfotomaculum reducens MI-15
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G206
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CTET212717 ncbi Clostridium tetani E885
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPHY357809 ncbi Clostridium phytofermentans ISDg6
CNOV386415 ncbi Clostridium novyi NT5
CJEJ407148 ncbi Campylobacter jejuni jejuni 811166
CJEJ360109 ncbi Campylobacter jejuni doylei 269.976
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1766
CJEJ195099 ncbi Campylobacter jejuni RM12216
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111686
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
CFET360106 ncbi Campylobacter fetus fetus 82-406
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CCUR360105 ncbi Campylobacter curvus 525.926
CCON360104 ncbi Campylobacter concisus 138266
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT498213 ncbi Clostridium botulinum B1 str. Okra6
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUB ncbi Bacillus subtilis subtilis 1686
BSP36773 Burkholderia sp.6
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K166
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1006
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF6
AHYD196024 Aeromonas hydrophila dhakensis6
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ABUT367737 ncbi Arcobacter butzleri RM40185
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  EG11967   EG11654   EG11545   EG11388   EG10841   EG10321   
YPSE349747 YPSIP31758_2314YPSIP31758_2291YPSIP31758_2313YPSIP31758_2284YPSIP31758_2283YPSIP31758_2281
YPSE273123 YPTB1681YPTB1702YPTB1682YPTB1712YPTB1713YPTB1714
YPES386656 YPDSF_1316YPDSF_1295YPDSF_1315YPDSF_1286YPDSF_1285YPDSF_1284
YPES377628 YPN_2316YPN_2294YPN_2315YPN_2283YPN_2282YPN_2281
YPES360102 YPA_1183YPA_1205YPA_1184YPA_1216YPA_1217YPA_1218
YPES349746 YPANGOLA_A2007YPANGOLA_A2013YPANGOLA_A2009YPANGOLA_A2021YPANGOLA_A2022YPANGOLA_A2023
YPES214092 YPO1808YPO1829YPO1809YPO1840YPO1841YPO1842
YPES187410 Y2501Y2477Y2499Y2467Y2466Y2465
YENT393305 YE2551YE2538YE2550YE2525YE2524YE2522
XORY360094 XOOORF_2811XOOORF_2834XOOORF_2812XOOORF_2815XOOORF_2814XOOORF_2813
XORY342109 XOO2437XOO2461XOO2438XOO2441XOO2440XOO2439
XORY291331 XOO2579XOO2602XOO2580XOO2583XOO2582XOO2581
XCAM487884 XCC-B100_2241XCC-B100_2222XCC-B100_2240XCC-B100_2236XCC-B100_2238XCC-B100_2239
XCAM316273 XCAORF_2222XCAORF_2193XCAORF_2221XCAORF_2217XCAORF_2218XCAORF_2219
XCAM314565 XC_2243XC_2261XC_2244XC_2247XC_2246XC_2245
XCAM190485 XCC1943XCC1925XCC1942XCC1939XCC1940XCC1941
XAXO190486 XAC1977XAC1953XAC1976XAC1973XAC1974XAC1975
WSUC273121 WS0259WS1998WS0498WS0151WS0150WS2198
VVUL216895 VV1_0217VV1_1936VV1_0216VV1_1930VV1_1928VV1_1926
VVUL196600 VV0969VV2480VV0970VV2487VV2489VV2491
VPAR223926 VP0785VP2248VPA0274VP2254VPA1550VP2259
VFIS312309 VF1868VF1851VF1867VF1858VF1860VF1866
VEIS391735 VEIS_0560VEIS_1114VEIS_0559VEIS_1110VEIS_4396VEIS_4397
VCHO345073 VC0395_A1783VC0395_A1716VC0395_A1782VC0395_A1722VC0395_A1724VC0395_A1727
VCHO VC2191VC2132VC2190VC2138VC2140VC2143
TTUR377629 TERTU_1234TERTU_1332TERTU_1235TERTU_1319TERTU_1316TERTU_1237
TTEN273068 TTE0494TTE1441TTE0495TTE0506TTE0505TTE0499
TSP28240 TRQ2_0864TRQ2_0728TRQ2_0865TRQ2_1640TRQ2_1693TRQ2_0168
TSP1755 TETH514_0451TETH514_1692TETH514_0452TETH514_0465TETH514_0464TETH514_0456
TROS309801 TRD_A0048TRD_A0650TRD_A0049TRD_A0221TRD_A0220TRD_A0208
TPSE340099 TETH39_1784TETH39_1256TETH39_1783TETH39_1770TETH39_1771TETH39_1779
TPET390874 TPET_0841TPET_0704TPET_0842TPET_1574TPET_1623TPET_0170
TPAL243276 TP_0660TP_0400TP_0659TP_0943TP_0872TP_0792
TMAR243274 TM_0083TM_0220TM_0082TM_1179TM_1123TM_0758
TLET416591 TLET_0672TLET_1899TLET_0671TLET_1994TLET_0171TLET_0257
TDEN326298 TMDEN_0566TMDEN_0473TMDEN_1037TMDEN_0203TMDEN_0202
TDEN292415 TBD_1628TBD_1601TBD_1627TBD_1593TBD_1592TBD_1590
TDEN243275 TDE_2352TDE_1216TDE_2353TDE_0119TDE_1004
TCRU317025 TCR_1465TCR_1441TCR_1464TCR_1448TCR_1449TCR_1453
STYP99287 STM1183STM1970STM1184STM1961STM1960STM2771
STHE292459 STH2980STH3002STH2979STH2976STH2977
SSP94122 SHEWANA3_1330SHEWANA3_1343SHEWANA3_1331SHEWANA3_1337SHEWANA3_1335SHEWANA3_1333
SSON300269 SSO_1102SSO_1997SSO_1103SSO_1981SSO_1980SSO_1193
SSED425104 SSED_3078SSED_3065SSED_3077SSED_3071SSED_3073SSED_3076
SRUB309807 SRU_2637SRU_2616SRU_2636SRU_2626SRU_2630
SPRO399741 SPRO_2961SPRO_2948SPRO_2960SPRO_2942SPRO_2941SPRO_2940
SPEA398579 SPEA_0066SPEA_1362SPEA_1350SPEA_1356SPEA_1354SPEA_1352
SONE211586 SO_3227SO_3239SO_3233SO_3235SO_3237
SLOI323850 SHEW_1354SHEW_1367SHEW_1355SHEW_1361SHEW_1359SHEW_1356
SHAL458817 SHAL_4256SHAL_1449SHAL_1437SHAL_1443SHAL_1441SHAL_1439
SGLO343509 SG0039SG0052SG0040SG0056SG0057SG0058
SFLE373384 SFV_1982SFV_1105SFV_1969SFV_1968SFV_1967
SENT454169 SEHA_C1295SEHA_C2186SEHA_C1296SEHA_C2176SEHA_C2175SEHA_C2947
SENT321314 SCH_1130SCH_1975SCH_1131SCH_1965SCH_1964SCH_1962
SENT295319 SPA1668SPA0900SPA1667SPA0909SPA0910SPA0911
SENT220341 STY1222STY2178STY1223STY2169STY2168STY2165
SENT209261 T1737T0907T1736T0916T0917T0918
SDEN318161 SDEN_1312SDEN_1325SDEN_1313SDEN_1319SDEN_1317SDEN_1315
SDEG203122 SDE_2204SDE_2187SDE_2203SDE_2197SDE_2198SDE_2200
SBOY300268 SBO_1982SBO_1981SBO_1081SBO_1082SBO_1083
SBAL402882 SHEW185_2953SHEW185_2935SHEW185_2952SHEW185_2941SHEW185_2943SHEW185_2948
SBAL399599 SBAL195_3091SBAL195_3067SBAL195_3090SBAL195_3073SBAL195_3075SBAL195_3084
SALA317655 SALA_2916SALA_2935SALA_2917SALA_2922SALA_2938
SACI56780 SYN_02812SYN_01471SYN_02811SYN_02806SYN_02805SYN_02804
RSPH349102 RSPH17025_1663RSPH17025_1642RSPH17025_1662RSPH17025_1659RSPH17025_1658
RSOL267608 RSP0351RSP0391RSP0352RSP0384RSP0383
RMET266264 RMET_3743RMET_5262RMET_3744RMET_5255RMET_2267RMET_5252
RFER338969 RFER_3723RFER_0551RFER_3724RFER_0633RFER_0632RFER_0631
REUT381666 H16_B0270H16_B2369H16_B0271H16_B2363H16_B2362H16_B2360
REUT264198 REUT_B5634REUT_B5098REUT_B5635REUT_B5092REUT_B5091REUT_B5089
PTHE370438 PTH_2112PTH_2088PTH_2111PTH_2095PTH_2096PTH_2102
PSYR223283 PSPTO_1944PSPTO_1959PSPTO_1945PSPTO_1952PSPTO_1951PSPTO_1949
PSYR205918 PSYR_3471PSYR_3456PSYR_3470PSYR_3463PSYR_3464PSYR_3466
PSTU379731 PST_1397PST_2589PST_1398PST_1866PST_1406PST_1404
PSP117 RB10644RB5642RB5711RB3453RB6996
PPUT76869 PPUTGB1_3942PPUTGB1_3929PPUTGB1_3941PPUTGB1_3936PPUTGB1_3937PPUTGB1_3939
PPUT351746 PPUT_1474PPUT_1499PPUT_1475PPUT_1492PPUT_1491PPUT_1489
PPUT160488 PP_4381PP_4368PP_4380PP_4375PP_4376PP_4378
PPRO298386 PBPRA0910PBPRA0924PBPRA0039PBPRA0043PBPRA0915PBPRA0913
PMOB403833 PMOB_0393PMOB_1374PMOB_0392PMOB_1487PMOB_0353PMOB_1811
PMEN399739 PMEN_2841PMEN_2824PMEN_2840PMEN_2831PMEN_0186PMEN_2835
PLUM243265 PLU1924PLU1947PLU1925PLU1952PLU1953PLU1954
PHAL326442 PSHAA0778PSHAA0793PSHAA0779PSHAA0786PSHAA0784PSHAA0781
PFLU220664 PFL_1618PFL_1639PFL_1619PFL_1632PFL_1631PFL_1629
PFLU216595 PFLU4451PFLU4438PFLU4450PFLU4445PFLU4446PFLU4448
PFLU205922 PFL_1506PFL_1537PFL_1507PFL_1530PFL_1529PFL_1527
PENT384676 PSEEN3832PSEEN3815PSEEN3831PSEEN3823PSEEN3824PSEEN3826
PCAR338963 PCAR_1149PCAR_1191PCAR_1148PCAR_1111PCAR_1112PCAR_1115
PATL342610 PATL_3091PATL_3046PATL_3090PATL_3082PATL_3083PATL_3085
PAER208964 PA1086PA1102PA1087PA1095PA1094PA1092
PAER208963 PA14_50360PA14_50130PA14_50340PA14_50250PA14_50270PA14_50290
OIHE221109 OB2507OB1556OB2506OB2500OB2501OB2727
NSP387092 NIS_0645NIS_0606NIS_0644NIS_0643NIS_0642NIS_0640
NSP35761 NOCA_0769NOCA_0758NOCA_0770NOCA_0764NOCA_0765NOCA_0766
NOCE323261 NOC_2369NOC_2358NOC_2368NOC_2364NOC_2365NOC_2367
NMUL323848 NMUL_A1330NMUL_A1346NMUL_A1331NMUL_A1340NMUL_A1339NMUL_A1337
NEUT335283 NEUT_0344NEUT_0744NEUT_0345NEUT_0949NEUT_0950NEUT_1824
NEUR228410 NE0311NE2084NE0312NE1596NE1595NE1593
MTHE264732 MOTH_0746MOTH_0772MOTH_0747MOTH_0766MOTH_0765MOTH_0760
MSP400668 MMWYL1_3574MMWYL1_3447MMWYL1_3573MMWYL1_3567MMWYL1_3568MMWYL1_3570
MPET420662 MPE_A3064MPE_A0566MPE_A3063MPE_A2864MPE_A2865MPE_A2866
MFLA265072 MFLA_1963MFLA_1977MFLA_1964MFLA_1983MFLA_1984MFLA_1986
MAQU351348 MAQU_1111MAQU_1996MAQU_1112MAQU_2589MAQU_2590MAQU_2592
LSPH444177 BSPH_1151BSPH_1551BSPH_1152BSPH_1174BSPH_1035
LPNE400673 LPC_0694LPC_1200LPC_0695LPC_0753LPC_0754LPC_0756
LPNE297246 LPP1233LPP1723LPP1234LPP1291LPP1292LPP1294
LPNE297245 LPL1233LPL1723LPL1234LPL1290LPL1291LPL1293
LPNE272624 LPG1225LPG1759LPG1226LPG1337LPG1338LPG1340
LINT363253 LI0747LI0856LI0748LI0210LI0710
LINT267671 LIC_13451LIC_10023LIC_13450LIC_11657LIC_11890
LINT189518 LA4308LA0026LA4307LA2280LA2017
LCHO395495 LCHO_2725LCHO_1017LCHO_2724LCHO_1012LCHO_1011LCHO_1010
LBOR355277 LBJ_2967LBJ_0019LBJ_2966LBJ_1331LBJ_1961
LBOR355276 LBL_0097LBL_0019LBL_0098LBL_1556LBL_1323
LBIF456481 LEPBI_I3213LEPBI_I3423LEPBI_I1471LEPBI_I0580LEPBI_I2133
LBIF355278 LBF_3101LBF_3306LBF_1418LBF_0561LBF_1538
JSP375286 MMA_1427MMA_1440MMA_1428MMA_1447MMA_1448MMA_1450
ILOI283942 IL1138IL1199IL1137IL1133IL1134IL1136
HPYL85963 JHP1047JHP0326JHP0280JHP0690JHP0689JHP0107
HPYL357544 HPAG1_1057HPAG1_0347HPAG1_0297HPAG1_0738HPAG1_0737HPAG1_0115
HPY HP1119HP0352HP0295HP0753HP0752HP0115
HMOD498761 HM1_1205HM1_2222HM1_1206HM1_1251HM1_1627HM1_1250
HHEP235279 HH_0876HH_0610HH_1695HH_0791HH_0790HH_1653
HHAL349124 HHAL_0511HHAL_0497HHAL_0510HHAL_0503HHAL_0504HHAL_0506
HCHE349521 HCH_04473HCH_05192HCH_04472HCH_04817HCH_04818HCH_04822
HARS204773 HEAR1891HEAR1877HEAR1890HEAR1869HEAR1868HEAR1866
HACI382638 HAC_0597HAC_0970HAC_0555HAC_0665HAC_0666HAC_1474
GURA351605 GURA_4099GURA_4212GURA_4098GURA_4093GURA_4094GURA_4095
GTHE420246 GTNG_3062GTNG_1073GTNG_3061GTNG_3068GTNG_3054GTNG_3067
GSUL243231 GSU_3043GSU_0411GSU_3042GSU_3036GSU_3037GSU_3038
GMET269799 GMET_0438GMET_3111GMET_0439GMET_0445GMET_0444GMET_0442
GKAU235909 GK3137GK1220GK3136GK3113GK3114GK3131
FNOD381764 FNOD_1651FNOD_0833FNOD_1650FNOD_0821FNOD_0400FNOD_1476
ESP42895 ENT638_1596ENT638_2530ENT638_1597ENT638_2524ENT638_2523ENT638_2522
EFER585054 EFER_1846EFER_1924EFER_1845EFER_1168EFER_1169EFER_1170
ECOO157 FLGKFLIGFLGLFLISFLIDFLIC
ECOL83334 ECS1460ECS2678ECS1461ECS2664ECS2663ECS2662
ECOL585397 ECED1_1226ECED1_2206ECED1_1227ECED1_2190ECED1_2189ECED1_2188
ECOL585057 ECIAI39_2080ECIAI39_2079ECIAI39_1130ECIAI39_1131ECIAI39_1132
ECOL585056 ECUMN_1256ECUMN_2231ECUMN_1257ECUMN_2217ECUMN_2216ECUMN_2215
ECOL585055 EC55989_1195EC55989_2159EC55989_1196EC55989_2146EC55989_2145EC55989_2144
ECOL585035 ECS88_1096ECS88_1992ECS88_1097ECS88_1979ECS88_1978ECS88_1977
ECOL585034 ECIAI1_1118ECIAI1_2020ECIAI1_1119ECIAI1_2011ECIAI1_2010ECIAI1_2009
ECOL481805 ECOLC_2518ECOLC_1703ECOLC_2517ECOLC_1714ECOLC_1715ECOLC_1716
ECOL469008 ECBD_2518ECBD_1706ECBD_2517ECBD_1717ECBD_1718ECBD_1719
ECOL439855 ECSMS35_2046ECSMS35_1245ECSMS35_2045ECSMS35_1256ECSMS35_1257ECSMS35_1258
ECOL409438 ECSE_1145ECSE_2170ECSE_1146ECSE_2156ECSE_2155ECSE_2154
ECOL405955 APECO1_164APECO1_978APECO1_165APECO1_966APECO1_965APECO1_964
ECOL364106 UTI89_C1207UTI89_C2139UTI89_C1208UTI89_C2126UTI89_C2125UTI89_C2124
ECOL362663 ECP_1074ECP_1873ECP_1075ECP_1859ECP_1858ECP_1857
ECOL331111 ECE24377A_1205ECE24377A_2172ECE24377A_1206ECE24377A_2160ECE24377A_2159ECE24377A_2158
ECOL316407 ECK1067:JW1069:B1082ECK1937:JW1923:B1939ECK1068:JW1070:B1083ECK1924:JW1910:B1925ECK1923:JW1909:B1924ECK1922:JW1908:B1923
ECOL199310 C1351C2355C1352C2340C2339C2338
ECAR218491 ECA1711ECA1725ECA1712ECA1729ECA1730ECA1731
DRED349161 DRED_2436DRED_2407DRED_2435DRED_2415DRED_2433
DPSY177439 DP2689DP2657DP1661DP1658DP1659DP2693
DHAF138119 DSY3028DSY2988DSY3027DSY3000DSY3001DSY3022
DDES207559 DDE_3152DDE_0352DDE_3151DDE_1119DDE_1120DDE_1501
DARO159087 DARO_0758DARO_0772DARO_0759DARO_0781DARO_0782DARO_0784
CVIO243365 CV_2879CV_3135CV_2878CV_2993CV_2305CV_3879
CTET212717 CTC_01724CTC_01675CTC_01722CTC_01719CTC_01715
CSAL290398 CSAL_1969CSAL_1956CSAL_1968CSAL_2032CSAL_2033CSAL_1985
CPSY167879 CPS_1486CPS_1503CPS_1487CPS_1496CPS_1492CPS_1488
CPHY357809 CPHY_0305CPHY_2716CPHY_0307CPHY_0313CPHY_0312CPHY_3850
CNOV386415 NT01CX_1872NT01CX_1903NT01CX_1873NT01CX_1878NT01CX_1881
CJEJ407148 C8J_1372C8J_0296C8J_0824C8J_0510C8J_0509C8J_1256
CJEJ360109 JJD26997_1814JJD26997_1644JJD26997_1031JJD26997_1381JJD26997_1382JJD26997_0372
CJEJ354242 CJJ81176_1459CJJ81176_0341CJJ81176_0894CJJ81176_0574CJJ81176_0573CJJ81176_1339
CJEJ195099 CJE_1640CJE_0364CJE_0966CJE_0653CJE_0652CJE_1528
CJEJ192222 CJ1466CJ0319CJ0887CCJ0549CJ0548CJ1339C
CJAP155077 CJA_1922CJA_1714CJA_1921CJA_1701CJA_1916CJA_1917
CHYD246194 CHY_0971CHY_0994CHY_0972CHY_0986CHY_0985CHY_0981
CFET360106 CFF8240_0100CFF8240_0266CFF8240_0683CFF8240_0091CFF8240_0092CFF8240_1635
CDIF272563 CD0231CD0249CD0232CD0235CD0239
CDES477974 DAUD_1788DAUD_1764DAUD_1787DAUD_1784DAUD_1783DAUD_1781
CCUR360105 CCV52592_0786CCV52592_1669CCV52592_1295CCV52592_0777CCV52592_0778CCV52592_0568
CCON360104 CCC13826_0708CCC13826_1592CCC13826_1300CCC13826_1036CCC13826_1035CCC13826_2297
CBOT536232 CLM_3106CLM_3027CLM_3105CLM_3100CLM_3060
CBOT515621 CLJ_B2967CLJ_B2893CLJ_B2966CLJ_B2961CLJ_B2958
CBOT498213 CLD_1834CLD_1902CLD_1835CLD_1840CLD_1841CLD_0531
CBOT441772 CLI_2790CLI_2728CLI_2789CLI_2784CLI_2760
CBOT441771 CLC_2614CLC_2536CLC_2613CLC_2608CLC_0300
CBOT441770 CLB_2681CLB_2604CLB_2680CLB_2675CLB_0285
CBOT36826 CBO2740CBO2661CBO2739CBO2734CBO0242
CACE272562 CAC2212CAC2161CAC2211CAC2206CAC2203
BVIE269482 BCEP1808_3100BCEP1808_3150BCEP1808_3099BCEP1808_3147BCEP1808_0198BCEP1808_0199
BTHA271848 BTH_I0250BTH_I0199BTH_I0251BTH_I0202BTH_I3197BTH_I3196
BSUB BSU35410BSU16220BSU35400BSU35330BSU35340BSU35360
BSP36773 BCEP18194_A6361BCEP18194_A6414BCEP18194_A6360BCEP18194_A6411BCEP18194_C7620BCEP18194_A3343
BPUM315750 BPUM_3190BPUM_1520BPUM_3189BPUM_3183BPUM_3184BPUM_0150
BPSE320373 BURPS668_0276BURPS668_0221BURPS668_0277BURPS668_0224BURPS668_3871BURPS668_3870
BPSE320372 BURPS1710B_A0492BURPS1710B_A0439BURPS1710B_A0493BURPS1710B_A0442BURPS1710B_A0098BURPS1710B_A0097
BPSE272560 BPSL0280BPSL0229BPSL0281BPSL0232BPSL3320BPSL3319
BPET94624 BPET2130BPET2146BPET2131BPET2153BPET2154BPET2095
BPER257313 BP1382BP1402BP1383BP1409BP1410BP0996
BPAR257311 BPP1494BPP1509BPP1495BPP1516BPP1517BPP1465
BMAL320389 BMA10247_3344BMA10247_3401BMA10247_3343BMA10247_3398BMA10247_3101BMA10247_3102
BMAL320388 BMASAVP1_A3004BMASAVP1_A2945BMASAVP1_A3005BMASAVP1_A2948BMASAVP1_A3449BMASAVP1_A3448
BMAL243160 BMA_3335BMA_3280BMA_3336BMA_3283BMA_2874BMA_2873
BLIC279010 BL03369BL01271BL03370BL03377BL03376BL03374
BHAL272558 BH3621BH2457BH3620BH3613BH3616
BCLA66692 ABC3079ABC2268ABC3078ABC3073ABC3074ABC3699
BCEN331272 BCEN2424_3015BCEN2424_3065BCEN2424_3014BCEN2424_3062BCEN2424_0240BCEN2424_0241
BCEN331271 BCEN_2401BCEN_2451BCEN_2400BCEN_2448BCEN_2867BCEN_2866
BBRO257310 BB2568BB2587BB2569BB2594BB2595BB2539
BBAC264462 BD0540BD3403BD0542BD0611BD0610BD0408
BAMY326423 RBAM_032560RBAM_016050RBAM_032550RBAM_032490RBAM_032500RBAM_032510
BAMB398577 BAMMC406_2925BAMMC406_2976BAMMC406_2924BAMMC406_2973BAMMC406_0168BAMMC406_0169
BAMB339670 BAMB_3060BAMB_3110BAMB_3059BAMB_3107BAMB_0155BAMB_0156
ASP62928 AZO2731AZO2717AZO2730AZO2707AZO2706AZO2704
ASP232721 AJS_3837AJS_3806AJS_3810AJS_3811AJS_3812
ASAL382245 ASA_0372ASA_1338ASA_0373ASA_0380ASA_2659ASA_2662
AORE350688 CLOS_2521CLOS_1480CLOS_2520CLOS_2489CLOS_2518
AMET293826 AMET_0727AMET_0609AMET_0728AMET_0786AMET_0785AMET_0732
AHYD196024 AHA_2833AHA_1366AHA_2832AHA_1702AHA_1701AHA_1699
AEHR187272 MLG_0902MLG_0710MLG_0903MLG_0704MLG_0703MLG_0698
ADEH290397 ADEH_1344ADEH_1393ADEH_1343ADEH_1341ADEH_1339
ABUT367737 ABU_0209ABU_1962ABU_0211ABU_0210ABU_2255
ABAU360910 BAV1697BAV1715BAV1698BAV1722BAV1723BAV1668
ABAC204669 ACID345_2930ACID345_1651ACID345_2931ACID345_2936ACID345_2935
AAVE397945 AAVE_4430AAVE_4394AAVE_4431AAVE_4398AAVE_4399AAVE_4400


Organism features enriched in list (features available for 209 out of the 221 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Singles 0.0046156116286
Disease:Botulism 0.005740255
Disease:Bubonic_plague 0.002026066
Disease:Gastroenteritis 0.00003121213
Endospores:No 0.000065755211
Endospores:Yes 0.00348152853
GC_Content_Range4:0-40 4.327e-847213
GC_Content_Range4:40-60 5.206e-6105224
GC_Content_Range7:30-40 5.014e-637166
GC_Content_Range7:50-60 0.000049256107
Genome_Size_Range5:0-2 5.892e-1518155
Genome_Size_Range5:2-4 0.003240357197
Genome_Size_Range5:4-6 9.116e-17111184
Genome_Size_Range9:1-2 6.522e-1018128
Genome_Size_Range9:2-3 5.220e-623120
Genome_Size_Range9:4-5 3.888e-96096
Genome_Size_Range9:5-6 2.494e-65188
Genome_Size_Range9:6-8 0.00227772238
Gram_Stain:Gram_Neg 1.280e-15164333
Gram_Stain:Gram_Pos 2.603e-827150
Habitat:Host-associated 0.000666157206
Habitat:Multiple 0.005605876178
Motility:No 2.670e-2011151
Motility:Yes 1.808e-34165267
Optimal_temp.:- 0.0024795107257
Optimal_temp.:28-30 0.000712877
Oxygen_Req:Microaerophilic 0.00003461518
Pathogenic_in:No 0.002007666226
Shape:Coccus 2.421e-16182
Shape:Rod 3.451e-10159347
Shape:Spiral 6.635e-72634



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 324
Effective number of orgs (counting one per cluster within 468 clusters): 249

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785780
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R10
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BQUI283165 ncbi Bartonella quintana Toulouse0
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHEN283166 ncbi Bartonella henselae Houston-10
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233651
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP62977 ncbi Acinetobacter sp. ADP10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  EG11967   EG11654   EG11545   EG11388   EG10841   EG10321   
XFAS405440
XFAS183190
XFAS160492
XAUT78245
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TPEN368408
TKOD69014
TFUS269800
TERY203124
TELO197221
TACI273075
STRO369723
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSAP342451
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SHAE279808
SGOR29390
SFUM335543
SERY405948
SEPI176280
SEPI176279
SELO269084
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435 SAG_1462
SAGA205921
SACI330779
RXYL266117
RTYP257363
RSP357808
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PSP56811
PSP312153
PSP296591
PRUM264731
PPEN278197 PEPE_0059
PNAP365044
PMUL272843
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PAST100379
PARS340102
PARC259536
PAER178306
PACN267747
PABY272844
OTSU357244
NSP103690
NSEN222891
NPHA348780
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NFAR247156
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLOT266835 MLL2901
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LSAK314315
LREU557436
LPLA220668
LMES203120
LLAC272623
LLAC272622
LJOH257314
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967 LSEI_0060
LBRE387344
LACI272621
KPNE272620
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HMUK485914
HMAR272569
HINF71421
HINF374930
HINF281310
HDUC233412
HBUT415426
HAUR316274
GVIO251221
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DSP255470
DSP216389
DRAD243230
DOLE96561
DNOD246195
DGEO319795
DETH243164
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEI306537
CHUT269798
CHOM360107
CGLU196627
CFEL264202
CEFF196164
CDIP257309
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CABO218497
BXEN266265
BTRI382640
BTHE226186
BSUI470137 BSUIS_B1365
BSUI204722 BR_A1138
BQUI283165
BOVI236 GBOORFA1129
BMEL359391 BAB2_1097
BMEL224914 BMEII0160
BLON206672
BHEN283166
BFRA295405
BFRA272559
BCIC186490
BCAN483179 BCAN_B1167
BAPH372461 BCC_044
BABO262698 BRUAB2_1075
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114 EBA4527
ASP62977
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
ANAE240017
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
ABOR393595
AAUR290340


Organism features enriched in list (features available for 304 out of the 324 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.002690899
Arrangment:Clusters 0.00020581617
Arrangment:Filaments 0.00138291010
Disease:Pharyngitis 0.005227088
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00070951111
Disease:Wide_range_of_infections 0.00070951111
Disease:bronchitis_and_pneumonitis 0.005227088
Disease:gastroenteritis 0.0008805113
Endospores:No 9.397e-8140211
Endospores:Yes 7.867e-71153
GC_Content_Range4:0-40 2.519e-7140213
GC_Content_Range4:60-100 0.000030855145
GC_Content_Range7:30-40 1.157e-6112166
GC_Content_Range7:50-60 0.003552244107
GC_Content_Range7:60-70 1.168e-646134
Genome_Size_Range5:0-2 5.726e-20128155
Genome_Size_Range5:2-4 0.0000648124197
Genome_Size_Range5:4-6 1.117e-3033184
Genome_Size_Range9:0-1 0.00099322227
Genome_Size_Range9:1-2 3.700e-16106128
Genome_Size_Range9:2-3 2.195e-889120
Genome_Size_Range9:4-5 7.574e-171496
Genome_Size_Range9:5-6 1.799e-101988
Genome_Size_Range9:6-8 0.00431601238
Gram_Stain:Gram_Neg 1.266e-16125333
Gram_Stain:Gram_Pos 1.023e-6103150
Habitat:Host-associated 7.388e-6132206
Habitat:Multiple 7.256e-669178
Habitat:Terrestrial 0.0015156831
Motility:No 3.637e-29135151
Motility:Yes 4.203e-5350267
Optimal_temp.:- 0.0007270116257
Optimal_temp.:30-37 0.00465131518
Optimal_temp.:37 0.000267471106
Oxygen_Req:Microaerophilic 0.0000269118
Shape:Coccobacillus 0.00740681011
Shape:Coccus 6.074e-207882
Shape:Irregular_coccus 0.00001251717
Shape:Rod 1.818e-16133347
Shape:Sphere 0.00051841719



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 17
Effective number of orgs (counting one per cluster within 468 clusters): 13

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TPAL243276 ncbi Treponema pallidum pallidum Nichols 8.567e-62496
HACI382638 ncbi Helicobacter acinonychis Sheeba 0.00062975076
HPYL357544 ncbi Helicobacter pylori HPAG1 0.00074215216
HPY ncbi Helicobacter pylori 26695 0.00074215216
HPYL85963 ncbi Helicobacter pylori J99 0.00078615266
HHEP235279 ncbi Helicobacter hepaticus ATCC 51449 0.00281486506
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B1 0.00292076546
CJEJ195099 ncbi Campylobacter jejuni RM1221 0.00347056736
CJEJ360109 ncbi Campylobacter jejuni doylei 269.97 0.00353316756
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 11168 0.00396326886
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-176 0.00428596976
CJEJ407148 ncbi Campylobacter jejuni jejuni 81116 0.00487217126
CFET360106 ncbi Campylobacter fetus fetus 82-40 0.00525497216
CCON360104 ncbi Campylobacter concisus 13826 0.00650427476
CCUR360105 ncbi Campylobacter curvus 525.92 0.00721617606
TLET416591 ncbi Thermotoga lettingae TMO 0.00975267996
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00990058016


Names of the homologs of the genes in the group in each of these orgs
  EG11967   EG11654   EG11545   EG11388   EG10841   EG10321   
TPAL243276 TP_0660TP_0400TP_0659TP_0943TP_0872TP_0792
HACI382638 HAC_0597HAC_0970HAC_0555HAC_0665HAC_0666HAC_1474
HPYL357544 HPAG1_1057HPAG1_0347HPAG1_0297HPAG1_0738HPAG1_0737HPAG1_0115
HPY HP1119HP0352HP0295HP0753HP0752HP0115
HPYL85963 JHP1047JHP0326JHP0280JHP0690JHP0689JHP0107
HHEP235279 HH_0876HH_0610HH_1695HH_0791HH_0790HH_1653
FNOD381764 FNOD_1651FNOD_0833FNOD_1650FNOD_0821FNOD_0400FNOD_1476
CJEJ195099 CJE_1640CJE_0364CJE_0966CJE_0653CJE_0652CJE_1528
CJEJ360109 JJD26997_1814JJD26997_1644JJD26997_1031JJD26997_1381JJD26997_1382JJD26997_0372
CJEJ192222 CJ1466CJ0319CJ0887CCJ0549CJ0548CJ1339C
CJEJ354242 CJJ81176_1459CJJ81176_0341CJJ81176_0894CJJ81176_0574CJJ81176_0573CJJ81176_1339
CJEJ407148 C8J_1372C8J_0296C8J_0824C8J_0510C8J_0509C8J_1256
CFET360106 CFF8240_0100CFF8240_0266CFF8240_0683CFF8240_0091CFF8240_0092CFF8240_1635
CCON360104 CCC13826_0708CCC13826_1592CCC13826_1300CCC13826_1036CCC13826_1035CCC13826_2297
CCUR360105 CCV52592_0786CCV52592_1669CCV52592_1295CCV52592_0777CCV52592_0778CCV52592_0568
TLET416591 TLET_0672TLET_1899TLET_0671TLET_1994TLET_0171TLET_0257
PMOB403833 PMOB_0393PMOB_1374PMOB_0392PMOB_1487PMOB_0353PMOB_1811


Organism features enriched in list (features available for 17 out of the 17 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0077715792
Arrangment:Singles 0.000080416286
Disease:Food_poisoning 0.000056249
Disease:Gastric_inflammation_and_peptic_ulcer_disease 0.000801622
GC_Content_Range4:0-40 0.000011515213
GC_Content_Range7:30-40 3.001e-715166
Genome_Size_Range5:0-2 1.628e-614155
Genome_Size_Range9:1-2 1.176e-714128
Gram_Stain:Gram_Neg 0.000821116333
Motility:Yes 1.290e-617267
Oxygen_Req:Microaerophilic 5.165e-11918
Pathogenic_in:Human 0.003237312213
Shape:Rod 0.00038523347
Shape:Spiral 1.655e-161434



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))1201050.5311
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181480.4971
PWY0-901 (selenocysteine biosynthesis I (bacteria))2301480.4617
GLYCOCAT-PWY (glycogen degradation I)2461490.4237
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761190.4215
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951270.4184
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911240.4093



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11654   EG11545   EG11388   EG10841   EG10321   
EG119670.9993120.9999420.9995450.999530.999574
EG116540.9993020.9995250.9994080.999408
EG115450.9995640.9995510.999622
EG113880.9998770.999716
EG108410.999773
EG10321



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PAIRWISE BLAST SCORES:

  EG11967   EG11654   EG11545   EG11388   EG10841   EG10321   
EG119670.0f0-----
EG11654-0.0f0----
EG11545--0.0f0---
EG11388---0.0f0--
EG10841----0.0f0-
EG10321-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-7452 (Flagellum) (degree of match pw to cand: 0.185, degree of match cand to pw: 0.833, average score: 0.998)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9994 EG10841 (fliD) EG10841-MONOMER (flagellar cap protein FliD; filament capping protein; enables filament assembly)
   *in cand* 0.9997 0.9994 EG10321 (fliC) EG10321-MONOMER (flagellar biosynthesis; flagellin, filament structural protein)
   *in cand* 0.9997 0.9993 EG11545 (flgL) EG11545-MONOMER (flagellar biosynthesis; hook-filament junction protein)
   *in cand* 0.9997 0.9993 EG11967 (flgK) EG11967-MONOMER (flagellar biosynthesis, hook-filament junction protein 1)
             0.9992 0.9989 G361 (flgE) G361-MONOMER (flagellar hook protein FlgE)
             0.9992 0.9990 G370 (flhA) G370-MONOMER (flagellar biosynthesis protein FlhA)
             0.9992 0.9990 G7028 (flhB) G7028-MONOMER (flagellar biosynthesis protein FlhB)
             0.9884 0.9745 EG11224 (fliO) EG11224-MONOMER (flagellar biosynthesis protein FliO)
             0.9993 0.9992 EG11975 (fliP) EG11975-MONOMER (flagellar biosynthesis protein FliP)
             0.9990 0.9989 EG11976 (fliQ) EG11976-MONOMER (flagellar biosynthesis protein FliQ)
             0.9993 0.9992 EG11977 (fliR) EG11977-MONOMER (flagellar biosynthesis protein FliR)
             0.9993 0.9990 EG11656 (fliH) EG11656-MONOMER (flagellar biosynthesis protein FliH)
             0.9994 0.9991 G377 (fliI) G377-MONOMER (flagellum-specific ATP synthase FliI)
             0.9992 0.9989 G378 (fliJ) G378-MONOMER (flagellar biosynthesis protein FliJ)
             0.9994 0.9992 EG10324 (fliN) FLIN-FLAGELLAR-C-RING-SWITCH (flagellar motor switch protein FliN)
             0.9994 0.9992 EG10323 (fliM) FLIM-FLAGELLAR-C-RING-SWITCH (flagellar motor switch protein FliM)
   *in cand* 0.9995 0.9993 EG11654 (fliG) FLIG-FLAGELLAR-SWITCH-PROTEIN (flagellar motor switch protein FliG)
             0.9994 0.9991 G364 (flgH) FLGH-FLAGELLAR-L-RING (flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein)
             0.9984 0.9979 EG10601 (motA) MOTA-FLAGELLAR-MOTOR-STATOR-PROTEIN (MotA protein, proton conductor component of motor; no effect on switching)
             0.9978 0.9972 EG10602 (motB) MOTB-FLAGELLAR-MOTOR-STATOR-PROTEIN (MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall)
             0.9993 0.9990 G358 (flgB) FLGB-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgB)
             0.9994 0.9991 G359 (flgC) FLGC-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgC)
             0.9994 0.9991 G362 (flgF) FLGF-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgF)
             0.9994 0.9992 G363 (flgG) FLGG-FLAGELLAR-MOTOR-ROD-PROTEIN (flagellar basal-body rod protein FlgG)
             0.9994 0.9991 G365 (flgI) FLGI-FLAGELLAR-P-RING (flagellar P-ring protein FlgI)
             0.9995 0.9993 EG11347 (fliF) FLIF-FLAGELLAR-MS-RING (flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein)
             0.9994 0.9991 EG11346 (fliE) EG11346-MONOMER (flagellar basal-body protein FliE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9995 EG11388 (fliS) EG11388-MONOMER (flagellar biosynthesis protein FliS)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10321 EG10841 EG11388 (centered at EG10841)
EG11545 EG11967 (centered at EG11545)
EG11654 (centered at EG11654)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11967   EG11654   EG11545   EG11388   EG10841   EG10321   
299/623295/623251/623227/623221/623248/623
AAEO224324:0:Tyes7090710--952
AAVE397945:0:Tyes36037456
ABAC204669:0:Tyes129001291-12961295
ABAU360910:0:Tyes29473054550
ABUT367737:0:Tyes01747-212039
ACAU438753:0:Tyes80----
ACEL351607:0:Tyes1110-4-
ACRY349163:8:Tyes01362----
ADEH290397:0:Tyes5544-20
AEHR187272:0:Tyes20412205650
AHYD196024:0:Tyes143301432333332330
AMET293826:0:Tyes1160117175174121
AORE350688:0:Tyes1111011101080-1108
ASAL382245:5:Tyes09341722022205
ASP232721:2:Tyes310-456
ASP62928:0:Tyes271326320
ASP76114:2:Tyes-----0
BABO262698:0:Tno0-----
BAFZ390236:2:Fyes331500--0
BAMB339670:3:Tno298030302979302701
BAMB398577:3:Tno279828492797284601
BAMY326423:0:Tyes165001649164316441645
BANT260799:0:Tno0101--31
BANT261594:2:Tno0728--28
BANT568206:2:Tyes382636--0
BANT592021:2:Tno0111--38
BAPH198804:0:Tyes2600----
BAPH372461:0:Tyes-0----
BBAC264462:0:Tyes11927681201821810
BBAC360095:0:Tyes030----
BBRO257310:0:Tyes29463053540
BBUR224326:21:Fno341440--0
BCAN483179:0:Tno0-----
BCEN331271:2:Tno151048477476
BCEN331272:3:Tyes276928192768281601
BCER226900:1:Tyes0919--19
BCER288681:0:Tno091--20
BCER315749:1:Tyes091--24
BCER405917:1:Tyes091--20
BCER572264:1:Tno091--21
BCLA66692:0:Tyes82308228178181442
BGAR290434:2:Fyes331460--0
BHAL272558:0:Tyes1179011781171-1174
BHER314723:0:Fyes30143---0
BJAP224911:0:Fyes217833298-0-
BLIC279010:0:Tyes187501874186718681870
BMAL243160:1:Tno42537142637410
BMAL320388:1:Tno590603489488
BMAL320389:1:Tyes24129824029501
BMEL224914:0:Tno0-----
BMEL359391:0:Tno0-----
BOVI236:0:Tyes0-----
BPAR257311:0:Tno25372643440
BPER257313:0:Tyes3453613463673680
BPET94624:0:Tyes33493456570
BPSE272560:1:Tyes51052331093108
BPSE320372:1:Tno39133839234110
BPSE320373:1:Tno55056335203519
BPUM315750:0:Tyes307214013071306530660
BSP107806:2:Tyes2650----
BSP36773:0:Tyes----0-
BSP36773:2:Tyes3073312630723123-0
BSP376:0:Tyes0806----
BSUB:0:Tyes200902008200120022004
BSUI204722:0:Tyes0-----
BSUI470137:0:Tno0-----
BTHA271848:1:Tno51052329362935
BTHU281309:1:Tno0920--20
BTHU412694:1:Tno091--20
BTUR314724:0:Fyes30144---0
BVIE269482:7:Tyes287629262875292301
BWEI315730:4:Tyes091--25
CACE272562:1:Tyes5004944-41
CAULO:0:Tyes07----
CBEI290402:0:Tyes310-25-22
CBOT36826:1:Tno2473239424722467-0
CBOT441770:0:Tyes2347227023462341-0
CBOT441771:0:Tno2267218822662261-0
CBOT441772:1:Tno5705651-31
CBOT498213:1:Tno247224042471246624650
CBOT508765:1:Tyes-3205-11
CBOT515621:2:Tyes7407368-65
CBOT536232:0:Tno7807772-33
CCON360104:2:Tyes28203622732741257
CCUR360105:0:Tyes2157460224223851
CDES477974:0:Tyes24023201917
CDIF272563:1:Tyes01814-8
CFET360106:0:Tyes9169567011504
CHYD246194:0:Tyes0231151410
CJAP155077:0:Tyes216132150210211
CJEJ192222:0:Tyes113005492342331007
CJEJ195099:0:Tno123805812852841130
CJEJ354242:2:Tyes10750528219218959
CJEJ360109:0:Tyes135311906249509510
CJEJ407148:0:Tno11090547225224993
CKLU431943:1:Tyes9655-958-0
CNOV386415:0:Tyes03116-9
CPHY357809:0:Tyes023902873514
CPSY167879:0:Tyes01711062
CSAL290398:0:Tyes13012757629
CSP501479:7:Fyes0-----
CSP501479:8:Fyes-0----
CSP78:2:Tyes06----
CTET212717:0:Tyes4604542-39
CVIO243365:0:Tyes57884457769701615
DARO159087:0:Tyes0141232426
DDES207559:0:Tyes2848028477787791165
DHAF138119:0:Tyes40039121334
DPSY177439:2:Tyes105610243011060
DRED349161:0:Tyes290288-26
DSHI398580:5:Tyes15430----
DVUL882:1:Tyes2060207547--
ECAR218491:0:Tyes0131171819
ECOL199310:0:Tno09851970969968
ECOL316407:0:Tno08731861860859
ECOL331111:6:Tno09341923922921
ECOL362663:0:Tno07941780779778
ECOL364106:1:Tno09311918917916
ECOL405955:2:Tyes08221810809808
ECOL409438:6:Tyes010331101910181017
ECOL413997:0:Tno0-1---
ECOL439855:4:Tno7920791111213
ECOL469008:0:Tno7890788101112
ECOL481805:0:Tno807080691011
ECOL585034:0:Tno08841875874873
ECOL585035:0:Tno08601847846845
ECOL585055:0:Tno09601948947946
ECOL585056:2:Tno09671955954953
ECOL585057:0:Tno935-934012
ECOL585397:0:Tno09261910909908
ECOL83334:0:Tno012381122412231222
ECOLI:0:Tno08941883882881
ECOO157:0:Tno012081119411931192
EFER585054:1:Tyes669744668012
ESP42895:1:Tyes09311925924923
FNOD381764:0:Tyes1270436126942301099
GKAU235909:1:Tyes195501954193119321949
GMET269799:1:Tyes026791764
GOXY290633:5:Tyes6010----
GSUL243231:0:Tyes262102620261426152616
GTHE420246:1:Tyes195801957196419501963
GURA351605:0:Tyes61195012
HACI382638:1:Tyes3636809495835
HARS204773:0:Tyes231022320
HCHE349521:0:Tyes17100344345349
HHAL349124:0:Tyes14013679
HHEP235279:0:Tyes268011031831821061
HMOD498761:0:Tyes4414914308961
HNEP81032:0:Tyes01130----
HPY:0:Tno10122381806406390
HPYL357544:1:Tyes9622351846296280
HPYL85963:0:Tno9302151715745730
ILOI283942:0:Tyes5724013
JSP290400:1:Tyes15320----
JSP375286:0:Tyes0131202123
KRAD266940:2:Fyes2903023--
LBIF355278:2:Tyes25032708-8480967
LBIF456481:2:Tno25932801-87301541
LBOR355276:1:Tyes690701391-1182
LBOR355277:1:Tno2625026241156-1726
LCAS321967:1:Tyes0-----
LCHO395495:0:Tyes174271741210
LINN272626:1:Tno091-2-
LINT189518:1:Tyes4321043202274-2009
LINT267671:1:Tno3371033701612-1840
LINT363253:3:Tyes5356445360-498
LMON169963:0:Tno091-2-
LMON265669:0:Tyes091-2-
LPNE272624:0:Tno05331112113115
LPNE297245:1:Fno04821585961
LPNE297246:1:Fyes04891606163
LPNE400673:0:Tno04951596062
LSPH444177:1:Tyes114502115135-0
LWEL386043:0:Tyes091-2-
LXYL281090:0:Tyes-1004-3
MAQU351348:2:Tyes08741146114621464
MEXT419610:0:Tyes03148----
MFLA265072:0:Tyes0141202123
MLOT266835:2:Tyes-0----
MMAG342108:0:Tyes33250----
MMAR394221:0:Tyes60----
MPET420662:1:Tyes249102490229222932294
MSP266779:3:Tyes028----
MSP400668:0:Tyes1260125119120122
MSP409:2:Tyes0931----
MTHE264732:0:Tyes0261201914
NARO279238:0:Tyes--0--0
NEUR228410:0:Tyes018031130613051303
NEUT335283:2:Tyes039715955961463
NHAM323097:2:Tyes5830----
NMUL323848:3:Tyes01611097
NOCE323261:1:Tyes11010679
NSP35761:1:Tyes11012678
NSP387092:0:Tyes39038373634
NWIN323098:0:Tyes5020----
OANT439375:4:Tyes029----
OCAR504832:0:Tyes1570----
OIHE221109:0:Tyes96309629569571183
PAER208963:0:Tyes160157810
PAER208964:0:Tno0161986
PATL342610:0:Tyes45044363739
PCAR338963:0:Tyes387937014
PENT384676:0:Tyes160157810
PFLU205922:0:Tyes0311242321
PFLU216595:1:Tyes130127810
PFLU220664:0:Tyes0211141311
PHAL326442:1:Tyes0141752
PING357804:0:Tyes50421--
PLUM243265:0:Fyes0231282930
PMEN399739:0:Tyes268826712687267802682
PMOB403833:0:Tyes42101041112501442
PPEN278197:0:Tyes----0-
PPRO298386:2:Tyes87188504876874
PPUT160488:0:Tno130127810
PPUT351746:0:Tyes0251181715
PPUT76869:0:Tno130127810
PSP117:0:Tyes403912991336-02065
PSTU379731:0:Tyes01178146397
PSYR205918:0:Tyes150147810
PSYR223283:2:Tyes0151875
PTHE370438:0:Tyes240237814
RDEN375451:4:Tyes01854----
RETL347834:5:Tyes290----
REUT264198:2:Tyes5449545320
REUT381666:1:Tyes020801207420732071
RFER338969:1:Tyes317203173828180
RLEG216596:5:Tyes0-----
RLEG216596:6:Tyes-0----
RMET266264:1:Tyes0150611499-1496
RMET266264:2:Tyes----0-
RPAL258594:0:Tyes3307626--0-
RPAL316055:0:Tyes717185--0-
RPAL316056:0:Tyes1142758-0-
RPAL316057:0:Tyes02198----
RPAL316058:0:Tyes30705168-0-
RPOM246200:1:Tyes02069----
RRUB269796:1:Tyes19810--1987-
RSOL267608:0:Tyes04013332-
RSPH272943:4:Tyes210--1716
RSPH349101:2:Tno210--1716
RSPH349102:5:Tyes21020-1716
SACI56780:0:Tyes3900391396397398
SAGA208435:0:Tno----0-
SALA317655:1:Tyes0191-622
SBAL399599:3:Tyes210206816
SBAL402882:1:Tno150146811
SBOY300268:1:Tyes859-858012
SDEG203122:0:Tyes17016101113
SDEN318161:0:Tyes0131753
SDYS300267:1:Tyes--92301-
SENT209261:0:Tno783078291011
SENT220341:0:Tno08581849848847
SENT295319:0:Tno732073191011
SENT321314:2:Tno08541844843841
SENT454169:2:Tno086018508491590
SFLE198214:0:Tyes-15-210
SFLE373384:0:Tno-8260815814813
SGLO343509:3:Tyes0131171819
SHAL458817:0:Tyes2911120642
SHIGELLA:0:Tno-14-210
SLAC55218:1:Fyes01564----
SLOI323850:0:Tyes0131752
SMED366394:3:Tyes300----
SMEL266834:2:Tyes290----
SONE211586:1:Tyes-0126810
SPEA398579:0:Tno013461334134013381336
SPRO399741:1:Tyes21820210
SRUB309807:1:Tyes21020-1014
SSED425104:0:Tyes130126811
SSON300269:1:Tyes0850183483387
SSP292414:2:Tyes19630----
SSP644076:5:Fyes-0----
SSP644076:6:Fyes0-----
SSP94122:1:Tyes0131753
STHE292459:0:Tyes426301-
STYP99287:1:Tyes077917707691576
SWOL335541:0:Tyes0-140--
TCRU317025:0:Tyes240237812
TDEN243275:0:Tyes2216108722170-877
TDEN292415:0:Tyes381137320
TDEN326298:0:Tyes37528486010-
TLET416591:0:Tyes50617555051855086
TMAR243274:0:Tyes1136010751020661
TPAL243276:0:Tyes2550254536465387
TPET390874:0:Tno688539689142814770
TPSE340099:0:Tyes5110510497498506
TROS309801:0:Tyes06021173172160
TSP1755:0:Tyes01217114135
TSP28240:0:Tyes713565714149215440
TTEN273068:0:Tyes0906111105
TTUR377629:0:Tyes081171692
VCHO:0:Tyes750746811
VCHO345073:1:Tno530526811
VEIS391735:1:Tyes1555055138093810
VFIS312309:2:Tyes170167915
VPAR223926:0:Tyes--0-1284-
VPAR223926:1:Tyes01479-1485-1490
VVUL196600:2:Tyes015241153115331535
VVUL216895:1:Tno116670166116591657
WSUC273121:0:Tyes1011686323101874
XAXO190486:0:Tyes24023202122
XCAM190485:0:Tyes18017141516
XCAM314565:0:Tno0181432
XCAM316273:0:Tno29028242526
XCAM487884:0:Tno19018141617
XORY291331:0:Tno0231432
XORY342109:0:Tyes0241432
XORY360094:0:Tno0462864
YENT393305:1:Tyes261325320
YPES187410:5:Tno361234210
YPES214092:3:Tno0221313233
YPES349746:2:Tno061141516
YPES360102:3:Tyes0221333435
YPES377628:2:Tno351334210
YPES386656:2:Tno321131210
YPSE273123:2:Tno0211303132
YPSE349747:2:Tno331032320
ZMOB264203:0:Tyes030--4624



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