CANDIDATE ID: 154

CANDIDATE ID: 154

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9979320e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7355 (ypjD) (b2611)
   Products of gene:
     - G7355-MONOMER (predicted inner membrane protein)

- EG11153 (rimM) (b2608)
   Products of gene:
     - EG11153-MONOMER (ribosome maturation protein)

- EG11023 (trmD) (b2607)
   Products of gene:
     - EG11023-MONOMER (TrmD)
     - CPLX0-3950 (tRNA m1G37 methyltransferase)
       Reactions:
        a tRNA + S-adenosyl-L-methionine  =  S-adenosyl-L-homocysteine + tRNA containing N1-methylguanine

- EG10915 (rpsP) (b2609)
   Products of gene:
     - EG10915-MONOMER (30S ribosomal subunit protein S16)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10880 (rplS) (b2606)
   Products of gene:
     - EG10880-MONOMER (50S ribosomal subunit protein L19)
     - CPLX0-3962 (50S ribosomal subunit)
     - CPLX0-3964 (ribosome)

- EG10300 (ffh) (b2610)
   Products of gene:
     - EG10300-MONOMER (protein component of the signal recognition particle (SRP))
     - SRP-CPLX (Signal Recognition Particle Protein Translocation System)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 261
Effective number of orgs (counting one per cluster within 468 clusters): 180

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TSP28240 Thermotoga sp.5
TPET390874 ncbi Thermotoga petrophila RKU-15
TMAR243274 ncbi Thermotoga maritima MSB85
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSUI391295 ncbi Streptococcus suis 05ZYH335
SSP94122 ncbi Shewanella sp. ANA-36
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE170187 ncbi Streptococcus pneumoniae G545
SPNE1313 Streptococcus pneumoniae5
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMUT210007 ncbi Streptococcus mutans UA1595
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-46
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGOR29390 Streptococcus gordonii Challis5
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
RSP357808 ncbi Roseiflexus sp. RS-15
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RCAS383372 ncbi Roseiflexus castenholzii DSM 139415
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OCAR504832 ncbi Oligotropha carboxidovorans OM55
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NGON242231 ncbi Neisseria gonorrhoeae FA 10906
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT6
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LSAK314315 ncbi Lactobacillus sakei sakei 23K5
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82935
LJOH257314 ncbi Lactobacillus johnsonii NCC 5335
LINN272626 ncbi Listeria innocua Clip112625
LGAS324831 ncbi Lactobacillus gasseri ATCC 333235
LCHO395495 ncbi Leptothrix cholodnii SP-65
LCAS321967 ncbi Lactobacillus casei ATCC 3345
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HARS204773 ncbi Herminiimonas arsenicoxydans6
GURA351605 ncbi Geobacter uraniireducens Rf45
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B15
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
EFAE226185 ncbi Enterococcus faecalis V5835
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DRED349161 ncbi Desulfotomaculum reducens MI-15
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA6
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)6
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CKLU431943 ncbi Clostridium kluyveri DSM 5555
CJAP155077 Cellvibrio japonicus6
CDIF272563 ncbi Clostridium difficile 6305
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BBRO257310 ncbi Bordetella bronchiseptica RB505
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)5
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  G7355   EG11153   EG11023   EG10915   EG10880   EG10300   
YPSE349747 YPSIP31758_3231YPSIP31758_3227YPSIP31758_3226YPSIP31758_3228YPSIP31758_3225YPSIP31758_3230
YPSE273123 YPTB0832YPTB0835YPTB0836YPTB0834YPTB0837YPTB0833
YPES386656 YPDSF_3063YPDSF_3067YPDSF_3068YPDSF_3066YPDSF_3069YPDSF_3064
YPES377628 YPN_0800YPN_0804YPN_0805YPN_0803YPN_0806YPN_0801
YPES360102 YPA_2847YPA_2850YPA_2851YPA_2849YPA_2852YPA_2848
YPES349746 YPANGOLA_A0885YPANGOLA_A0881YPANGOLA_A0880YPANGOLA_A0882YPANGOLA_A0879YPANGOLA_A0884
YPES214092 YPO3297YPO3294YPO3293YPO3295YPO3292YPO3296
YPES187410 Y0891Y0895Y0896Y0894Y0897Y0892
YENT393305 YE0841YE0844YE0845YE0843YE0846YE0842
XORY360094 XOOORF_4000XOOORF_3991XOOORF_3990XOOORF_3992XOOORF_3989XOOORF_3996
XORY342109 XOO1213XOO1220XOO1221XOO1219XOO1222XOO1215
XORY291331 XOO1319XOO1326XOO1327XOO1325XOO1328XOO1321
XFAS405440 XFASM12_0144XFASM12_0088XFASM12_0089XFASM12_0087XFASM12_0090XFASM12_0057
XFAS183190 PD_0139PD_0082PD_0083PD_0081PD_0084PD_0055
XFAS160492 XF0171XF0108XF0109XF0107XF0110XF0073
XCAM487884 XCC-B100_3146XCC-B100_3139XCC-B100_3138XCC-B100_3140XCC-B100_3137XCC-B100_3145
XCAM316273 XCAORF_1429XCAORF_1436XCAORF_1437XCAORF_1435XCAORF_1438XCAORF_1430
XCAM314565 XC_3049XC_3042XC_3041XC_3043XC_3040XC_3048
XCAM190485 XCC1193XCC1200XCC1201XCC1199XCC1202XCC1194
XAXO190486 XAC1288XAC1293XAC1294XAC1292XAC1295XAC1289
VVUL216895 VV1_1610VV1_1616VV1_1617VV1_1615VV1_1618VV1_1612
VVUL196600 VV2790VV2787VV2786VV2788VV2785VV2789
VPAR223926 VP2535VP2532VP2531VP2533VP2530VP2534
VFIS312309 VF0547VF0550VF0551VF0549VF0552VF0548
VEIS391735 VEIS_1501VEIS_3940VEIS_3941VEIS_3939VEIS_0827VEIS_1502
VCHO345073 VC0395_A0093VC0395_A0096VC0395_A0097VC0395_A0095VC0395_A0098VC0395_A0094
VCHO VC0559VC0562VC0563VC0561VC0564VC0560
TTUR377629 TERTU_1157TERTU_1160TERTU_1161TERTU_1159TERTU_1162TERTU_1158
TSP28240 TRQ2_1231TRQ2_1232TRQ2_1229TRQ2_1234TRQ2_1228
TPET390874 TPET_1224TPET_1223TPET_1226TPET_1221TPET_1227
TMAR243274 TM_1568TM_1569TM_1566TM_1571TM_1565
TCRU317025 TCR_0997TCR_0648TCR_0649TCR_0647TCR_0650TCR_0998
SWOL335541 SWOL_1494SWOL_1493SWOL_1497SWOL_1491SWOL_1498
STYP99287 STM2678STM2675STM2674STM2676STM2673STM2677
SSUI391295 SSU05_0819SSU05_0820SSU05_0796SSU05_0352SSU05_0876
SSP94122 SHEWANA3_3019SHEWANA3_3016SHEWANA3_3015SHEWANA3_3017SHEWANA3_3014SHEWANA3_3018
SSON300269 SSO_2768SSO_2765SSO_2764SSO_2766SSO_2763SSO_2767
SSED425104 SSED_1157SSED_1160SSED_1161SSED_1159SSED_1162SSED_1158
SPRO399741 SPRO_0850SPRO_0853SPRO_0854SPRO_0852SPRO_0855SPRO_0851
SPNE488221 SP70585_0820SP70585_0821SP70585_0817SP70585_1358SP70585_1352
SPNE487214 SPH_0876SPH_0877SPH_0873SPH_1435SPH_1428
SPNE170187 SPN04160SPN04161SPN04157SPN10091SPN10084
SPNE1313 SPJ_0715SPJ_0716SPJ_0712SPJ_1209SPJ_1202
SPEA398579 SPEA_1047SPEA_1050SPEA_1051SPEA_1049SPEA_1052SPEA_1048
SONE211586 SO_1355SO_1358SO_1359SO_1357SO_1360SO_1356
SMUT210007 SMU_867SMU_868SMU_865SMU_1288SMU_1060
SMEL266834 SMC03860SMC03861SMC03859SMC03863SMC03857
SMED366394 SMED_3098SMED_3099SMED_3097SMED_3101SMED_3095
SLOI323850 SHEW_1061SHEW_1064SHEW_1065SHEW_1063SHEW_1066SHEW_1062
SHIGELLA S2848YFJATRMDRPSPRPLSFFH
SHAL458817 SHAL_1095SHAL_1098SHAL_1099SHAL_1097SHAL_1100SHAL_1096
SGOR29390 SGO_1316SGO_1315SGO_1323SGO_1383SGO_1123
SGLO343509 SG0544SG0547SG0548SG0546SG0549SG0545
SFUM335543 SFUM_3041SFUM_3042SFUM_3039SFUM_3044SFUM_3038
SFLE373384 SFV_2859SFV_2862SFV_2863SFV_2861SFV_2864SFV_2860
SFLE198214 AAN44166.1AAN44163.1AAN44162.1AAN44164.1AAN44161.1AAN44165.1
SENT454169 SEHA_C2894SEHA_C2891SEHA_C2890SEHA_C2892SEHA_C2889SEHA_C2893
SENT321314 SCH_2679SCH_2676SCH_2675SCH_2677SCH_2674SCH_2678
SENT295319 SPA2537SPA2534SPA2533SPA2535SPA2532SPA2536
SENT220341 STY2865STY2862STY2861STY2863STY2860STY2864
SENT209261 T2633T2630T2629T2631T2628T2632
SDYS300267 SDY_2785SDY_2782SDY_2781SDY_2783SDY_2780SDY_2784
SDEN318161 SDEN_2756SDEN_2753SDEN_2752SDEN_2754SDEN_2751SDEN_2755
SDEG203122 SDE_1201SDE_1204SDE_1205SDE_1203SDE_1206SDE_1202
SBOY300268 SBO_2747SBO_2744SBO_2743SBO_2745SBO_2742SBO_2746
SBAL402882 SHEW185_1252SHEW185_1255SHEW185_1256SHEW185_1254SHEW185_1257SHEW185_1253
SBAL399599 SBAL195_1285SBAL195_1288SBAL195_1289SBAL195_1287SBAL195_1290SBAL195_1286
RSP357808 ROSERS_1289ROSERS_3686ROSERS_1287ROSERS_2781ROSERS_1286
RSOL267608 RSC2810RSC0934RSC0935RSC0933RSC0936RSC2811
RRUB269796 RRU_A1186RRU_A1187RRU_A1185RRU_A1188RRU_A1184
RPAL316058 RPB_0351RPB_0350RPB_0352RPB_0349RPB_0353
RPAL316057 RPD_0508RPD_0507RPD_0509RPD_0506RPD_0510
RPAL316056 RPC_0223RPC_0224RPC_0222RPC_0225RPC_0221
RPAL258594 RPA0243RPA0242RPA0244RPA0241RPA0245
RMET266264 RMET_3093RMET_0749RMET_0750RMET_0748RMET_0751RMET_3094
RLEG216596 RL4550RL4551RL4549RL4552RL4547
RFER338969 RFER_3343RFER_1403RFER_1404RFER_1402RFER_1405RFER_3342
REUT381666 H16_A3240H16_A0895H16_A0896H16_A0894H16_A0897H16_A3241
REUT264198 REUT_A2946REUT_A2539REUT_A2538REUT_A2540REUT_A2537REUT_A2947
RCAS383372 RCAS_1664RCAS_1332RCAS_1666RCAS_2561RCAS_1667
PTHE370438 PTH_1720PTH_1719PTH_1723PTH_1718PTH_1724
PSYR223283 PSPTO_1471PSPTO_1474PSPTO_1475PSPTO_1473PSPTO_1476PSPTO_1472
PSYR205918 PSYR_1280PSYR_1283PSYR_1284PSYR_1282PSYR_1285PSYR_1281
PSTU379731 PST_1189PST_1192PST_1193PST_1191PST_1194PST_1190
PSP56811 PSYCPRWF_0591PSYCPRWF_0201PSYCPRWF_0202PSYCPRWF_0200PSYCPRWF_0203PSYCPRWF_0592
PSP312153 PNUC_0202PNUC_0518PNUC_0519PNUC_0517PNUC_0520PNUC_0201
PSP296591 BPRO_1691BPRO_1692BPRO_1690BPRO_1693BPRO_1114
PPUT76869 PPUTGB1_1065PPUTGB1_1068PPUTGB1_1069PPUTGB1_1067PPUTGB1_1070PPUTGB1_1066
PPUT351746 PPUT_4261PPUT_4258PPUT_4257PPUT_4259PPUT_4256PPUT_4260
PPUT160488 PP_1460PP_1463PP_1464PP_1462PP_1465PP_1461
PPRO298386 PBPRA3043PBPRA3040PBPRA3039PBPRA3041PBPRA3038PBPRA3042
PNAP365044 PNAP_3380PNAP_1462PNAP_1463PNAP_1461PNAP_1464PNAP_3379
PMUL272843 PM1184PM1296PM1297PM1298PM1183
PMEN399739 PMEN_3403PMEN_3400PMEN_3399PMEN_3401PMEN_3398PMEN_3402
PLUM243265 PLU1255PLU1258PLU1259PLU1257PLU1260PLU1256
PING357804 PING_3369PING_3366PING_3365PING_3367PING_3364PING_3368
PHAL326442 PSHAA0940PSHAA0945PSHAA0946PSHAA0944PSHAA0947PSHAA0942
PFLU220664 PFL_1092PFL_1095PFL_1096PFL_1094PFL_1097PFL_1093
PFLU216595 PFLU5014PFLU5011PFLU5010PFLU5012PFLU5009PFLU5013
PFLU205922 PFL_1017PFL_1020PFL_1021PFL_1019PFL_1022PFL_1018
PENT384676 PSEEN4262PSEEN4259PSEEN4258PSEEN4260PSEEN4257PSEEN4261
PCRY335284 PCRYO_1986PCRYO_2321PCRYO_2320PCRYO_2322PCRYO_2319PCRYO_1985
PCAR338963 PCAR_2222PCAR_2221PCAR_2224PCAR_2219PCAR_2225
PATL342610 PATL_1669PATL_1578PATL_1579PATL_1577PATL_1580PATL_1670
PARC259536 PSYC_1708PSYC_2018PSYC_2017PSYC_2019PSYC_2016PSYC_1707
PAER208964 PA3747PA3744PA3743PA3745PA3742PA3746
PAER208963 PA14_15940PA14_15980PA14_15990PA14_15970PA14_16000PA14_15960
OIHE221109 OB1535OB1536OB1532OB1537OB1531
OCAR504832 OCAR_4269OCAR_4270OCAR_4268OCAR_4271OCAR_4267
NOCE323261 NOC_2262NOC_2259NOC_2258NOC_2260NOC_2257NOC_2261
NMUL323848 NMUL_A0570NMUL_A0571NMUL_A0569NMUL_A0572NMUL_A2134
NMEN374833 NMCC_1849NMCC_0537NMCC_0536NMCC_0538NMCC_0535NMCC_1850
NMEN272831 NMC1882NMC0533NMC0532NMC0534NMC0531NMC1883
NMEN122587 NMA2189NMA0794NMA0793NMA0795NMA0792NMA2190
NMEN122586 NMB_0296NMB_0591NMB_0590NMB_0592NMB_0589NMB_0295
NGON242231 NGO1699NGO0173NGO0172NGO0174NGO0171NGO1700
NEUT335283 NEUT_1709NEUT_0444NEUT_0443NEUT_0445NEUT_0442NEUT_1710
NEUR228410 NE1459NE1672NE1673NE1671NE1674NE1460
MTHE264732 MOTH_0969MOTH_0970MOTH_0967MOTH_0971MOTH_0966
MSUC221988 MS0518MS0441MS0442MS0440MS0443MS0519
MSP400668 MMWYL1_3772MMWYL1_3769MMWYL1_3768MMWYL1_3770MMWYL1_3767MMWYL1_3771
MSP266779 MESO_3443MESO_3444MESO_3339MESO_3445MESO_3341
MPET420662 MPE_A1105MPE_A1106MPE_A1104MPE_A1107MPE_A3220
MLOT266835 MLL4288MLL4287MLR4381MLL4283MLR4379
MFLA265072 MFLA_0521MFLA_2333MFLA_2332MFLA_2334MFLA_2331MFLA_0522
MEXT419610 MEXT_0654MEXT_0658MEXT_0653MEXT_4734MEXT_0651
MCAP243233 MCA_1337MCA_0393MCA_0394MCA_0392MCA_0395MCA_1338
MAQU351348 MAQU_2312MAQU_2279MAQU_2278MAQU_2280MAQU_2277MAQU_2311
LSPH444177 BSPH_1529BSPH_1530BSPH_1527BSPH_1531BSPH_1526
LSAK314315 LSA0717LSA0718LSA0715LSA0719LSA0714
LPNE400673 LPC_2945LPC_2946LPC_2944LPC_2947LPC_2943
LPNE297246 LPP0465LPP0464LPP0466LPP0463LPP0467
LPNE297245 LPL0441LPL0440LPL0442LPL0439LPL0443
LPNE272624 LPG0397LPG0396LPG0399LPG0395LPG0400
LMES203120 LEUM_1479LEUM_1478LEUM_1485LEUM_0607LEUM_1561
LJOH257314 LJ_1514LJ_1513LJ_1515LJ_1512LJ_1516
LINN272626 LIN1907LIN1906LIN1911LIN1901LIN1915
LGAS324831 LGAS_0787LGAS_0788LGAS_0786LGAS_0789LGAS_0785
LCHO395495 LCHO_0682LCHO_0683LCHO_0681LCHO_0684LCHO_0376
LCAS321967 LSEI_1599LSEI_1598LSEI_1601LSEI_1597LSEI_1602
KPNE272620 GKPORF_B2267GKPORF_B2264GKPORF_B2263GKPORF_B2265GKPORF_B2262GKPORF_B2266
JSP375286 MMA_2984MMA_0592MMA_0593MMA_0591MMA_0594MMA_2985
ILOI283942 IL1728IL1725IL1724IL1726IL1723IL1727
HSOM228400 HSM_0219HSM_0166HSM_0167HSM_0165HSM_0168HSM_0220
HSOM205914 HS_1428HS_0294HS_0295HS_0293HS_0296HS_1427
HMOD498761 HM1_2185HM1_2186HM1_2183HM1_2188HM1_2182
HINF71421 HI_0203HI_0202HI_0204HI_0201HI_0106
HINF374930 CGSHIEE_02230CGSHIEE_02235CGSHIEE_02225CGSHIEE_02240CGSHIEE_02745
HINF281310 NTHI0300NTHI0299NTHI0301NTHI0298NTHI0194
HHAL349124 HHAL_0445HHAL_0528HHAL_0530HHAL_0527HHAL_0444
HDUC233412 HD_1948HD_1947HD_1949HD_1946HD_1999
HCHE349521 HCH_01769HCH_01773HCH_01774HCH_01772HCH_01775HCH_01771
HAUR316274 HAUR_4619HAUR_2982HAUR_4621HAUR_0226HAUR_4622
HARS204773 HEAR2775HEAR0624HEAR0625HEAR0623HEAR0626HEAR2777
GURA351605 GURA_3761GURA_3760GURA_3763GURA_3758GURA_3764
GSUL243231 GSU_0645GSU_0646GSU_0643GSU_0648GSU_0642
GMET269799 GMET_2869GMET_2868GMET_2871GMET_2866GMET_2872
FTUL458234 FTA_1840FTA_1839FTA_1841FTA_1838FTA_1311
FTUL418136 FTW_0241FTW_0242FTW_0240FTW_0243FTW_0863
FTUL401614 FTN_1561FTN_1560FTN_1562FTN_1559FTN_0843
FTUL393115 FTF0151FTF0152FTF0150FTF0153FTF0964C
FTUL393011 FTH_1676FTH_1675FTH_1677FTH_1674FTH_1216
FTUL351581 FTL_1737FTL_1736FTL_1738FTL_1735FTL_1239
FRANT RIMMTRMDRPSPRPLSFFH
FPHI484022 FPHI_1053FPHI_1054FPHI_1052FPHI_1055FPHI_1770
FNOD381764 FNOD_0648FNOD_0649FNOD_0646FNOD_0651FNOD_0645
ESP42895 ENT638_3092ENT638_3089ENT638_3088ENT638_3090ENT638_3087ENT638_3091
EFER585054 EFER_0461EFER_0464EFER_0465EFER_0463EFER_0466EFER_0462
EFAE226185 EF_1900EF_1899EF_1694EF_1898EF_1700
ECOO157 Z3905YFJATRMDRPSPRPLSFFH
ECOL83334 ECS3474ECS3471ECS3470ECS3472ECS3469ECS3473
ECOL585397 ECED1_3050ECED1_3047ECED1_3046ECED1_3048ECED1_3045ECED1_3049
ECOL585057 ECIAI39_2815ECIAI39_2812ECIAI39_2811ECIAI39_2813ECIAI39_2810ECIAI39_2814
ECOL585056 ECUMN_2936ECUMN_2933ECUMN_2932ECUMN_2934ECUMN_2931ECUMN_2935
ECOL585055 EC55989_2900EC55989_2897EC55989_2896EC55989_2898EC55989_2895EC55989_2899
ECOL585035 ECS88_2797ECS88_2794ECS88_2793ECS88_2795ECS88_2792ECS88_2796
ECOL585034 ECIAI1_2733ECIAI1_2729ECIAI1_2728ECIAI1_2730ECIAI1_2727ECIAI1_2732
ECOL481805 ECOLC_1072ECOLC_1075ECOLC_1076ECOLC_1074ECOLC_1077ECOLC_1073
ECOL469008 ECBD_1075ECBD_1078ECBD_1079ECBD_1077ECBD_1080ECBD_1076
ECOL439855 ECSMS35_2763ECSMS35_2760ECSMS35_2759ECSMS35_2761ECSMS35_2758ECSMS35_2762
ECOL413997 ECB_02500ECB_02497ECB_02496ECB_02498ECB_02495ECB_02499
ECOL409438 ECSE_2895ECSE_2892ECSE_2891ECSE_2893ECSE_2890ECSE_2894
ECOL405955 APECO1_3922APECO1_3925APECO1_39262APECO1_3924APECO1_3927APECO1_3923
ECOL364106 UTI89_C2944UTI89_C2941UTI89_C2940UTI89_C2942UTI89_C2939UTI89_C2943
ECOL362663 ECP_2612ECP_2609ECP_2608ECP_2610ECP_2607ECP_2611
ECOL331111 ECE24377A_2895ECE24377A_2892ECE24377A_2891ECE24377A_2893ECE24377A_2890ECE24377A_2894
ECOL316407 ECK2608:JW2592:B2611ECK2605:JW5413:B2608ECK2604:JW2588:B2607ECK2606:JW2590:B2609ECK2603:JW2587:B2606ECK2607:JW5414:B2610
ECOL199310 C3132C3129C3128C3130C3127C3131
ECAR218491 ECA3361ECA3358ECA3357ECA3359ECA3356ECA3360
DRED349161 DRED_2052DRED_2051DRED_2055DRED_2050DRED_2056
DNOD246195 DNO_1008DNO_1009DNO_1007DNO_1010DNO_0428
DHAF138119 DSY2595DSY2594DSY2598DSY2592DSY2599
DARO159087 DARO_3065DARO_3064DARO_3066DARO_3063DARO_0642
CVIO243365 CV_3832CV_3674CV_3673CV_3675CV_3672CV_3833
CVES412965 COSY_0558COSY_0884COSY_0261COSY_0885COSY_0797COSY_0557
CSAL290398 CSAL_3018CSAL_3015CSAL_3014CSAL_3016CSAL_3013CSAL_3017
CRUT413404 RMAG_0605RMAG_0989RMAG_0275RMAG_0990RMAG_0872RMAG_0604
CPSY167879 CPS_4075CPS_4068CPS_4067CPS_4069CPS_4066CPS_4073
CPER195103 CPF_1964CPF_1963CPF_1966CPF_1962CPF_1967
CPER195102 CPE1710CPE1709CPE1712CPE1708CPE1713
CKLU431943 CKL_1404CKL_1405CKL_1402CKL_1406CKL_1401
CJAP155077 CJA_1684CJA_1434CJA_1435CJA_1433CJA_1436CJA_1685
CDIF272563 CD1255CD1256CD1253CD1257CD1252
CDES477974 DAUD_0659DAUD_0660DAUD_0656DAUD_0661DAUD_0655
CBUR434922 COXBU7E912_1623COXBU7E912_1630COXBU7E912_1631COXBU7E912_1629COXBU7E912_1632COXBU7E912_1624
CBUR360115 COXBURSA331_A0560COXBURSA331_A0551COXBURSA331_A0550COXBURSA331_A0552COXBURSA331_A0549COXBURSA331_A0559
CBUR227377 CBU_0451CBU_0444CBU_0443CBU_0445CBU_0442CBU_0450
CBLO291272 BPEN_180BPEN_181BPEN_179BPEN_182BPEN_178
BWEI315730 BCERKBAB4_3665BCERKBAB4_3664BCERKBAB4_3667BCERKBAB4_3663BCERKBAB4_3668
BTHU412694 BALH_3473BALH_3472BALH_3475BALH_3471BALH_3476
BTHU281309 BT9727_3583BT9727_3582BT9727_3585BT9727_3581BT9727_3586
BTHA271848 BTH_I1662BTH_I1663BTH_I1661BTH_I1664BTH_I1149
BSUB BSU16020BSU16030BSU15990BSU16040BSU15980
BSP376 BRADO0377BRADO0376BRADO0378BRADO0375BRADO0379
BSP36773 BCEP18194_A4184BCEP18194_A4185BCEP18194_A4183BCEP18194_A4186BCEP18194_A3675
BSP107806 BU395BU396BU394BU397BU393
BPUM315750 BPUM_1500BPUM_1501BPUM_1497BPUM_1502BPUM_1496
BPSE320373 BURPS668_2858BURPS668_2857BURPS668_2859BURPS668_2856BURPS668_3479
BPSE320372 BURPS1710B_A3217BURPS1710B_A3216BURPS1710B_A3218BURPS1710B_A3215BURPS1710B_A3793
BPSE272560 BPSL2491BPSL2490BPSL2492BPSL2489BPSL2995
BPET94624 BPET2005BPET2006BPET2004BPET1914BPET4326
BPER257313 BP1840BP1841BP1839BP0975BP0079
BPAR257311 BPP2866BPP2865BPP2867BPP1665BPP0501
BMAL320389 BMA10247_0229BMA10247_0230BMA10247_0228BMA10247_0231BMA10247_3268
BMAL320388 BMASAVP1_A2544BMASAVP1_A2543BMASAVP1_A2545BMASAVP1_A2542BMASAVP1_A0436
BMAL243160 BMA_0402BMA_0401BMA_0403BMA_0400BMA_2514
BLIC279010 BL05160BL01291BL02323BL01290BL02322
BJAP224911 BLR0483BLR0486BLR0482BLR0487BLR0481
BHAL272558 BH2480BH2479BH2483BH2478BH2484
BCLA66692 ABC2290ABC2289ABC2293ABC2287ABC2294
BCIC186490 BCI_0197BCI_0196BCI_0198BCI_0195BCI_0199
BCER572264 BCA_3942BCA_3941BCA_3944BCA_3939BCA_3945
BCER405917 BCE_3884BCE_3883BCE_3886BCE_3882BCE_3887
BCER315749 BCER98_2494BCER98_2493BCER98_2496BCER98_2492BCER98_2497
BCER288681 BCE33L3601BCE33L3600BCE33L3603BCE33L3599BCE33L3604
BCER226900 BC_3840BC_3839BC_3842BC_3838BC_3843
BCEN331272 BCEN2424_1070BCEN2424_1071BCEN2424_1069BCEN2424_1072BCEN2424_0590
BCEN331271 BCEN_0591BCEN_0592BCEN_0590BCEN_0593BCEN_0108
BBRO257310 BB3187BB3186BB3188BB3443BB0506
BAPH198804 BUSG382BUSG383BUSG381BUSG384BUSG380
BANT592021 BAA_4004BAA_4003BAA_4006BAA_4001BAA_4007
BANT568206 BAMEG_0651BAMEG_0652BAMEG_0649BAMEG_0654BAMEG_0648
BANT261594 GBAA3980GBAA3979GBAA3982GBAA3978GBAA3983
BANT260799 BAS3693BAS3692BAS3695BAS3691BAS3696
BAMY326423 RBAM_015850RBAM_015860RBAM_015820RBAM_015870RBAM_015810
BAMB398577 BAMMC406_0950BAMMC406_0951BAMMC406_0949BAMMC406_0952BAMMC406_0518
BAMB339670 BAMB_0946BAMB_0947BAMB_0945BAMB_0948BAMB_0493
ASP76114 EBA7167EBA7168EBB247EBA7169EBA4351
ASP62977 ACIAD0838ACIAD3312ACIAD3311ACIAD3313ACIAD3310ACIAD0839
ASP62928 AZO3233AZO2899AZO2900AZO2898AZO2901AZO3232
ASP232721 AJS_3627AJS_3354AJS_3353AJS_3355AJS_3352AJS_3626
ASAL382245 ASA_0664ASA_0667ASA_0668ASA_0666ASA_0669ASA_0665
APLE434271 APJL_1406APJL_1823APJL_1824APJL_1822APJL_1825APJL_1778
APLE416269 APL_1388APL_1787APL_1788APL_1786APL_1789APL_1742
AORE350688 CLOS_1466CLOS_1467CLOS_1464CLOS_1468CLOS_1463
AHYD196024 AHA_0664AHA_0667AHA_0668AHA_0666AHA_0669AHA_0665
AFER243159 AFE_0254AFE_0255AFE_0253AFE_0256AFE_0252
AEHR187272 MLG_1939MLG_0885MLG_0886MLG_0884MLG_0887MLG_1938
ABOR393595 ABO_0796ABO_0799ABO_0800ABO_0798ABO_0801ABO_0797
ABAU360910 BAV2350BAV2349BAV2352BAV1373BAV0452
AAVE397945 AAVE_1885AAVE_1886AAVE_1884AAVE_1887AAVE_0870


Organism features enriched in list (features available for 246 out of the 261 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.006354258112
Disease:Bubonic_plague 0.005446666
Disease:Dysentery 0.005446666
Disease:Gastroenteritis 0.00931271013
Endospores:No 6.639e-1644211
GC_Content_Range4:0-40 1.253e-1152213
GC_Content_Range4:40-60 2.885e-8126224
GC_Content_Range7:0-30 5.272e-6647
GC_Content_Range7:30-40 2.702e-646166
GC_Content_Range7:50-60 1.366e-667107
GC_Content_Range7:60-70 0.005966168134
Genome_Size_Range5:0-2 2.133e-1624155
Genome_Size_Range5:2-4 0.000214364197
Genome_Size_Range5:4-6 2.211e-21130184
Genome_Size_Range5:6-10 0.00546432847
Genome_Size_Range9:0-1 0.0015552427
Genome_Size_Range9:1-2 4.867e-1320128
Genome_Size_Range9:2-3 0.000769136120
Genome_Size_Range9:4-5 2.278e-66196
Genome_Size_Range9:5-6 5.773e-146988
Genome_Size_Range9:6-8 0.00014612738
Gram_Stain:Gram_Neg 5.025e-17189333
Gram_Stain:Gram_Pos 3.981e-738150
Habitat:Host-associated 0.003522673206
Habitat:Multiple 0.000055596178
Habitat:Specialized 0.00565911453
Motility:No 7.846e-1131151
Motility:Yes 5.447e-11151267
Optimal_temp.:- 0.0021528124257
Optimal_temp.:25-30 0.00015311619
Optimal_temp.:30-37 0.0005900118
Optimal_temp.:35-37 0.00001111313
Optimal_temp.:37 0.003254533106
Oxygen_Req:Anaerobic 8.855e-624102
Oxygen_Req:Facultative 1.327e-7114201
Pathogenic_in:Animal 0.00145203966
Pathogenic_in:No 0.007142683226
Shape:Coccus 2.151e-61682
Shape:Rod 4.224e-18196347
Shape:Sphere 0.0024303219
Shape:Spiral 0.0000731434
Temp._range:Hyperthermophilic 0.0003696223
Temp._range:Mesophilic 0.0006628214473
Temp._range:Psychrophilic 0.004958489
Temp._range:Thermophilic 0.0028401735



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 139
Effective number of orgs (counting one per cluster within 468 clusters): 122

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SARE391037 ncbi Salinispora arenicola CNS-2051
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GFOR411154 ncbi Gramella forsetii KT08031
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH1
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B311
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  G7355   EG11153   EG11023   EG10915   EG10880   EG10300   
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TKOD69014
TDEN326298 TMDEN_0451
TACI273075
STOK273063
SSP387093 SUN_0368
SSOL273057
SMAR399550
SARE391037 SARE_1190
SACI330779
RSAL288705
PTOR263820
PRUM264731 GFRORF1153
PLUT319225 PLUT_0966
PISL384616
PINT246198 PIN_A1462
PHOR70601
PGIN242619 PG_1115
PFUR186497
PDIS435591 BDI_0218
PAST100379 PAM471
PARS340102
PAER178306
PABY272844
NSEN222891 NSE_0123
NPHA348780
MVAN350058 MVAN_2189
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0425
MMOB267748 MMOB4280
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML1616
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047 MCAP_0547
MBUR259564
MBAR269797
MAVI243243 MAV_3762
MART243272 MART0211
MAEO419665
MACE188937
LXYL281090 LXX14820
LINT363253 LI0575
LINT267671
LINT189518
LBOR355277
LBOR355276
LBIF456481 LEPBI_I1662
LBIF355278 LBF_1612
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP1078
HPYL357544 HPAG1_1090
HPY HP1151
HMUK485914
HMAR272569
HHEP235279 HH_0939
HBUT415426
HACI382638 HAC_1318
GFOR411154 GFO_2797
FJOH376686 FJOH_0244
ERUM302409 ERGA_CDS_01240
ERUM254945 ERWE_CDS_01280
ECHA205920 ECH_0192
ECAN269484 ECAJ_0129
CTRA471473 CTLON_0277
CTRA471472 CTL0282
CSUL444179
CPNE182082 CPB0118
CPNE138677 CPJ0117
CPNE115713 CPN0117
CPNE115711 CP_0656
CMUR243161 TC_0296
CMIC443906 CMM_1370
CMIC31964 CMS0758
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0677
CJEJ354242 CJJ81176_0733
CJEI306537 JK1184
CHUT269798 CHU_2754
CHOM360107 CHAB381_0557
CGLU196627 CG2235
CFET360106 CFF8240_1038
CFEL264202 CF0355
CEFF196164 CE1932
CDIP257309 DIP1527
CCUR360105 CCV52592_0676
CCON360104 CCC13826_1433
CCHL340177
CCAV227941 CCA_00656
CABO218497 CAB627
BXEN266265
BTUR314724 BT0695
BTHE226186 BT_1601
BLON206672
BHER314723 BH0695
BFRA295405 BF3217
BFRA272559 BF3056
BBUR224326 BB_0695
AYEL322098 AYWB_307
AURANTIMONAS
ASP1667 ARTH_2483
APER272557
AMAR234826 AM059
ALAI441768 ACL_1188
AFUL224325
ABUT367737 ABU_1973
AAUR290340 AAUR_2449
AAEO224324 AQ_1057


Organism features enriched in list (features available for 133 out of the 139 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.005133269
Arrangment:Chains 0.0000991892
Arrangment:Pairs 0.000181612112
Arrangment:Singles 7.368e-687286
Disease:Leptospirosis 0.002614844
Disease:Pharyngitis 6.212e-688
Disease:bronchitis_and_pneumonitis 6.212e-688
Endospores:No 3.380e-1587211
Endospores:Yes 9.162e-6153
GC_Content_Range4:0-40 0.003369361213
GC_Content_Range4:60-100 0.000161418145
GC_Content_Range7:0-30 0.00009422247
GC_Content_Range7:40-50 0.001224939117
GC_Content_Range7:50-60 0.005138415107
GC_Content_Range7:60-70 0.000174416134
Genome_Size_Range5:0-2 1.342e-1674155
Genome_Size_Range5:4-6 3.160e-1113184
Genome_Size_Range5:6-10 0.0057010447
Genome_Size_Range9:0-1 8.258e-92027
Genome_Size_Range9:1-2 1.113e-854128
Genome_Size_Range9:4-5 0.0000112796
Genome_Size_Range9:5-6 0.0000158688
Gram_Stain:Gram_Neg 0.001699262333
Gram_Stain:Gram_Pos 8.517e-616150
Habitat:Host-associated 0.001362261206
Habitat:Multiple 2.258e-620178
Habitat:Specialized 0.00072442253
Motility:No 0.003328846151
Optimal_temp.:- 0.000312442257
Optimal_temp.:37 0.000292238106
Optimal_temp.:85 0.002614844
Oxygen_Req:Anaerobic 2.206e-642102
Oxygen_Req:Facultative 0.000010626201
Salinity:Extreme_halophilic 0.007411957
Shape:Irregular_coccus 1.063e-81517
Shape:Pleomorphic 0.002196168
Shape:Rod 3.637e-950347
Shape:Sphere 1.252e-81619
Shape:Spiral 4.505e-72134
Temp._range:Hyperthermophilic 1.175e-81823
Temp._range:Mesophilic 0.001378296473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 2
Effective number of orgs (counting one per cluster within 468 clusters): 2

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00575657326
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00693507556


Names of the homologs of the genes in the group in each of these orgs
  G7355   EG11153   EG11023   EG10915   EG10880   EG10300   
CVES412965 COSY_0558COSY_0884COSY_0261COSY_0885COSY_0797COSY_0557
CRUT413404 RMAG_0605RMAG_0989RMAG_0275RMAG_0990RMAG_0872RMAG_0604


Organism features enriched in list (features available for 2 out of the 2 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181770.5844
GLYCOCAT-PWY (glycogen degradation I)2461830.5320
PWY-5386 (methylglyoxal degradation I)3052030.4896
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002000.4839
PWY-5918 (heme biosynthesis I)2721860.4726
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951490.4722
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861890.4517
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911900.4440
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761350.4427
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901890.4403
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251590.4385
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392090.4375
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911420.4373
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961910.4364
AST-PWY (arginine degradation II (AST pathway))1201030.4350
PWY-1269 (CMP-KDO biosynthesis I)3252020.4288
PWY-4041 (γ-glutamyl cycle)2791820.4260
PWY-6196 (serine racemization)102910.4244
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831350.4167
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491160.4086
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81760.4069
TYRFUMCAT-PWY (tyrosine degradation I)1841340.4059



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11153   EG11023   EG10915   EG10880   EG10300   
G73550.9994450.9994070.9994980.9993790.99981
EG111530.9999940.9999920.9999680.999904
EG110230.9999720.9999810.999854
EG109150.9999390.999945
EG108800.99981
EG10300



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PAIRWISE BLAST SCORES:

  G7355   EG11153   EG11023   EG10915   EG10880   EG10300   
G73550.0f0-----
EG11153-0.0f0----
EG11023--0.0f0---
EG10915---0.0f0--
EG10880----0.0f0-
EG10300-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-3964 (ribosome) (degree of match pw to cand: 0.034, degree of match cand to pw: 0.333, average score: 0.685)
  Genes in pathway or complex:
                NIL    NIL EG30077 (rrlA) RRLA-RRNA (23S ribosomal RNA (rrlA))
                NIL    NIL EG30070 (rrfA) RRFA-RRNA (5S ribosomal RNA (rrfA))
             0.2724 0.0578 EG10864 (rplA) EG10864-MONOMER (50S ribosomal subunit protein L1)
             0.1953 0.0038 EG10865 (rplB) EG10865-MONOMER (50S ribosomal subunit protein L2)
             0.2653 0.0439 EG10866 (rplC) EG10866-MONOMER (50S ribosomal subunit protein L3)
             0.2263 0.0705 EG10867 (rplD) EG10867-MONOMER (50S ribosomal subunit protein L4)
             0.2003 0.0027 EG10868 (rplE) EG10868-MONOMER (50S ribosomal subunit protein L5)
             0.2043 0.0026 EG10869 (rplF) EG10869-MONOMER (50S ribosomal subunit protein L6)
             0.2344 0.0038 EG10873 (rplL) MONOMER0-2811 (50S ribosomal subunit protein L7)
             0.2357 0.0501 EG10871 (rplJ) EG10871-MONOMER (50S ribosomal subunit protein L10)
             0.2945 0.1197 EG10870 (rplI) EG10870-MONOMER (50S ribosomal subunit protein L9)
             0.2037 0.0035 EG10872 (rplK) EG10872-MONOMER (50S ribosomal subunit protein L11)
             0.1113 0.0033 EG10874 (rplM) EG10874-MONOMER (50S ribosomal subunit protein L13)
             0.2316 0.0784 EG10875 (rplN) EG10875-MONOMER (50S ribosomal subunit protein L14)
             0.3094 0.1047 EG10876 (rplO) EG10876-MONOMER (50S ribosomal subunit protein L15)
             0.2870 0.0916 EG10877 (rplP) EG10877-MONOMER (50S ribosomal subunit protein L16)
             0.3655 0.1810 EG10878 (rplQ) EG10878-MONOMER (50S ribosomal subunit protein L17)
             0.2149 0.0515 EG10879 (rplR) EG10879-MONOMER (50S ribosomal subunit protein L18)
   *in cand* 0.9998 0.9994 EG10880 (rplS) EG10880-MONOMER (50S ribosomal subunit protein L19)
             0.7621 0.0907 EG10881 (rplT) EG10881-MONOMER (50S ribosomal subunit protein L20)
             0.9860 0.9772 EG50001 (rplU) EG50001-MONOMER (50S ribosomal subunit protein L21)
             0.2580 0.0037 EG10882 (rplV) EG10882-MONOMER (50S ribosomal subunit protein L22)
             0.3951 0.0985 EG10883 (rplW) EG10883-MONOMER (50S ribosomal subunit protein L23)
             0.2202 0.0399 EG10884 (rplX) EG10884-MONOMER (50S ribosomal subunit protein L24)
             0.2186 0.0937 EG10885 (rplY) EG10885-MONOMER (50S ribosomal subunit protein L25)
             0.9866 0.9823 EG50002 (rpmA) EG50002-MONOMER (50S ribosomal subunit protein L27)
             0.9611 0.9296 EG10886 (rpmB) EG10886-MONOMER (50S ribosomal subunit protein L28)
             0.2533 0.0024 EG10887 (rpmC) EG10887-MONOMER (50S ribosomal subunit protein L29)
             0.1983 0.0026 EG10888 (rpmD) EG10888-MONOMER (50S ribosomal subunit protein L30)
             0.7008 0.2154 EG10889 (rpmE) EG10889-MONOMER (50S ribosomal subunit protein L31)
             0.8951 0.6637 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
             0.3996 0.0519 EG10891 (rpmG) EG10891-MONOMER (50S ribosomal subunit protein L33)
             0.2702 0.1023 EG10892 (rpmH) EG10892-MONOMER (50S ribosomal subunit protein L34)
             0.1326 0.0684 EG11231 (rpmI) EG11231-MONOMER (50S ribosomal subunit protein L35)
             0.3522 0.1453 EG11232 (rpmJ) EG11232-MONOMER (50S ribosomal subunit protein L36)
                NIL    NIL EG30084 (rrsA) RRSA-RRNA (16S ribosomal RNA (rrsA))
             0.8215 0.2944 EG10900 (rpsA) EG10900-MONOMER (30S ribosomal subunit protein S1)
             0.9472 0.7325 EG10901 (rpsB) EG10901-MONOMER (30S ribosomal subunit protein S2)
             0.1763 0.0021 EG10902 (rpsC) EG10902-MONOMER (30S ribosomal subunit protein S3)
             0.3891 0.2231 EG10903 (rpsD) EG10903-MONOMER (30S ribosomal subunit protein S4)
             0.2506 0.0695 EG10904 (rpsE) EG10904-MONOMER (30S ribosomal subunit protein S5)
             0.3244 0.1020 EG10905 (rpsF) EG10905-MONOMER (30S ribosomal subunit protein S6)
             0.2175 0.0020 EG10906 (rpsG) EG10906-MONOMER (30S ribosomal subunit protein S7)
             0.2529 0.0475 EG10907 (rpsH) EG10907-MONOMER (30S ribosomal subunit protein S8)
             0.0726 0.0022 EG10908 (rpsI) EG10908-MONOMER (30S ribosomal subunit protein S9)
             0.1840 0.0020 EG10909 (rpsJ) EG10909-MONOMER (30S ribosomal subunit protein S10)
             0.1879 0.0029 EG10910 (rpsK) EG10910-MONOMER (30S ribosomal subunit protein S11)
             0.4223 0.0875 EG10911 (rpsL) EG10911-MONOMER (30S ribosomal subunit protein S12)
             0.2553 0.0581 EG10912 (rpsM) EG10912-MONOMER (30S ribosomal subunit protein S13)
             0.5609 0.2735 EG10913 (rpsN) EG10913-MONOMER (30S ribosomal subunit protein S14)
             0.9596 0.7752 EG10914 (rpsO) EG10914-MONOMER (30S ribosomal subunit protein S15)
   *in cand* 0.9999 0.9995 EG10915 (rpsP) EG10915-MONOMER (30S ribosomal subunit protein S16)
             0.2377 0.0033 EG10916 (rpsQ) EG10916-MONOMER (30S ribosomal subunit protein S17)
             0.3195 0.1244 EG10917 (rpsR) EG10917-MONOMER (30S ribosomal subunit protein S18)
             0.2869 0.0602 EG10918 (rpsS) EG10918-MONOMER (30S ribosomal subunit protein S19)
             0.9736 0.9688 EG10919 (rpsT) EG10919-MONOMER (30S ribosomal subunit protein S20)
             0.9535 0.8541 EG10920 (rpsU) EG10920-MONOMER (30S ribosomal subunit protein S21)
             0.3558 0.3542 EG11508 (sra) EG11508-MONOMER (30S ribosomal subunit protein S22)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9998 EG10300 (ffh) EG10300-MONOMER (protein component of the signal recognition particle (SRP))
   *in cand* 0.9999 0.9994 EG11023 (trmD) EG11023-MONOMER (TrmD)
   *in cand* 0.9999 0.9994 EG11153 (rimM) EG11153-MONOMER (ribosome maturation protein)
   *in cand* 0.9996 0.9994 G7355 (ypjD) G7355-MONOMER (predicted inner membrane protein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10300 EG10880 EG10915 EG11023 EG11153 G7355 (centered at EG10915)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7355   EG11153   EG11023   EG10915   EG10880   EG10300   
144/623420/623410/623419/623415/623418/623
AAEO224324:0:Tyes-0----
AAUR290340:2:Tyes--0---
AAVE397945:0:Tyes-10011002100010030
ABAC204669:0:Tyes-01-2162
ABAU360910:0:Tyes-1906190519089240
ABOR393595:0:Tyes034251
ABUT367737:0:Tyes---0--
ACAU438753:0:Tyes-2-140
ACEL351607:0:Tyes-10---
ACRY349163:8:Tyes---304
ADEH290397:0:Tyes-103--
AEHR187272:0:Tyes104312031042
AFER243159:0:Tyes-23140
AHYD196024:0:Tyes034251
ALAI441768:0:Tyes--0---
AMAR234826:0:Tyes---0--
AMAR329726:9:Tyes-0---2094
AMET293826:0:Tyes-103-4
ANAE240017:0:Tyes---50-
AORE350688:0:Tyes-34150
APHA212042:0:Tyes-1141-0--
APLE416269:0:Tyes0423424422425378
APLE434271:0:Tno0436437435438391
ASAL382245:5:Tyes034251
ASP1667:3:Tyes---0--
ASP232721:2:Tyes2682130267
ASP62928:0:Tyes3411203340
ASP62977:0:Tyes022972296229822951
ASP76114:2:Tyes-16251626162416270
AVAR240292:3:Tyes-0724-14613273
AYEL322098:4:Tyes--0---
BABO262698:1:Tno-86-0802
BAFZ390236:2:Fyes---04-
BAMB339670:3:Tno-4624634614640
BAMB398577:3:Tno-4344354334360
BAMY326423:0:Tyes-45160
BANT260799:0:Tno-21405
BANT261594:2:Tno-21405
BANT568206:2:Tyes-34150
BANT592021:2:Tno-21405
BAPH198804:0:Tyes-23140
BAPH372461:0:Tyes-1203-
BBAC264462:0:Tyes--0--4
BBAC360095:0:Tyes--181-0
BBRO257310:0:Tyes-26962695269729590
BBUR224326:21:Fno---0--
BCAN483179:1:Tno-97-0892
BCEN331271:2:Tno-4914924904930
BCEN331272:3:Tyes-4794804784810
BCER226900:1:Tyes-21405
BCER288681:0:Tno-21405
BCER315749:1:Tyes-21405
BCER405917:1:Tyes-21405
BCER572264:1:Tno-21405
BCIC186490:0:Tyes-21304
BCLA66692:0:Tyes-32607
BFRA272559:1:Tyes-----0
BFRA295405:0:Tno-----0
BGAR290434:2:Fyes---04-
BHAL272558:0:Tyes-21506
BHEN283166:0:Tyes--118020
BHER314723:0:Fyes---0--
BJAP224911:0:Fyes-25160
BLIC279010:0:Tyes-45160
BMAL243160:1:Tno-21301872
BMAL320388:1:Tno-20602059206120580
BMAL320389:1:Tyes-12032975
BMEL224914:1:Tno-0-87885
BMEL359391:1:Tno-79-0722
BOVI236:1:Tyes-76-0682
BPAR257311:0:Tno-22492248225010990
BPER257313:0:Tyes-1573157415727960
BPET94624:0:Tyes-91929002443
BPSE272560:1:Tyes-2130513
BPSE320372:1:Tno-2130569
BPSE320373:1:Tno-2130606
BPUM315750:0:Tyes-45160
BQUI283165:0:Tyes--116018
BSP107806:2:Tyes-23140
BSP36773:2:Tyes-5175185165190
BSP376:0:Tyes-21304
BSUB:0:Tyes-45170
BSUI204722:1:Tyes-85-0782
BSUI470137:0:Tno---0-2
BSUI470137:1:Tno-8--0-
BTHA271848:1:Tno-5045055035060
BTHE226186:0:Tyes-----0
BTHU281309:1:Tno-21405
BTHU412694:1:Tno-21405
BTRI382640:1:Tyes--119021
BTUR314724:0:Fyes---0--
BVIE269482:7:Tyes-423424-4250
BWEI315730:4:Tyes-21405
CABO218497:0:Tyes--0---
CACE272562:1:Tyes-2304-
CAULO:0:Tyes-3507-350803509
CBEI290402:0:Tyes--304-
CBLO203907:0:Tyes-1203-
CBLO291272:0:Tno-23140
CBOT36826:1:Tno-103-4
CBOT441770:0:Tyes-103-4
CBOT441771:0:Tno-103-4
CBOT441772:1:Tno-103-4
CBOT498213:1:Tno-103-4
CBOT508765:1:Tyes-2304-
CBOT515621:2:Tyes-103-4
CBOT536232:0:Tno-103-4
CBUR227377:1:Tyes821307
CBUR360115:1:Tno11213010
CBUR434922:2:Tno078691
CCAV227941:1:Tyes--0---
CCON360104:2:Tyes---0--
CCUR360105:0:Tyes---0--
CDES477974:0:Tyes-45160
CDIF272563:1:Tyes-34150
CDIP257309:0:Tyes----0-
CEFF196164:0:Fyes----0-
CFEL264202:1:Tyes--0---
CFET360106:0:Tyes---0--
CGLU196627:0:Tyes----0-
CHOM360107:1:Tyes---0--
CHUT269798:0:Tyes-----0
CHYD246194:0:Tyes-32-06
CJAP155077:0:Tyes2421203243
CJEI306537:0:Tyes----0-
CJEJ192222:0:Tyes-2-0--
CJEJ195099:0:Tno-2-0--
CJEJ354242:2:Tyes---0--
CJEJ360109:0:Tyes-0-2--
CJEJ407148:0:Tno---0--
CKLU431943:1:Tyes-34150
CMIC31964:2:Tyes--0---
CMIC443906:2:Tyes--0---
CMUR243161:1:Tyes--0---
CNOV386415:0:Tyes-2140-
CPEL335992:0:Tyes--01--
CPER195102:1:Tyes-21405
CPER195103:0:Tno-21405
CPER289380:3:Tyes-103-4
CPHY357809:0:Tyes-10--4
CPNE115711:1:Tyes--0---
CPNE115713:0:Tno--0---
CPNE138677:0:Tno--0---
CPNE182082:0:Tno--0---
CPRO264201:0:Fyes--10--
CPSY167879:0:Tyes921307
CRUT413404:0:Tyes3106620663554309
CSAL290398:0:Tyes521304
CSP501479:7:Fyes-9127-0
CSP78:2:Tyes-4708-470704706
CTEP194439:0:Tyes---30-
CTET212717:0:Tyes-12-30
CTRA471472:0:Tyes--0---
CTRA471473:0:Tno--0---
CVES412965:0:Tyes2855990600513284
CVIO243365:0:Tyes1612130162
DARO159087:0:Tyes-24432442244424410
DDES207559:0:Tyes-21-05
DETH243164:0:Tyes-2230---
DGEO319795:1:Tyes-0--253-
DHAF138119:0:Tyes-32607
DNOD246195:0:Tyes-5595605585610
DOLE96561:0:Tyes-103-4
DPSY177439:2:Tyes--4-60
DRAD243230:3:Tyes-12301231-0-
DRED349161:0:Tyes-21506
DSHI398580:5:Tyes-3-7012
DSP216389:0:Tyes-2240---
DSP255470:0:Tno-2190---
DVUL882:1:Tyes--0--4
ECAN269484:0:Tyes---0--
ECAR218491:0:Tyes521304
ECHA205920:0:Tyes---0--
ECOL199310:0:Tno521304
ECOL316407:0:Tno521304
ECOL331111:6:Tno521304
ECOL362663:0:Tno521304
ECOL364106:1:Tno521304
ECOL405955:2:Tyes631405
ECOL409438:6:Tyes521304
ECOL413997:0:Tno521304
ECOL439855:4:Tno521304
ECOL469008:0:Tno034251
ECOL481805:0:Tno034251
ECOL585034:0:Tno621305
ECOL585035:0:Tno521304
ECOL585055:0:Tno521304
ECOL585056:2:Tno521304
ECOL585057:0:Tno521304
ECOL585397:0:Tno521304
ECOL83334:0:Tno521304
ECOLI:0:Tno521304
ECOO157:0:Tno521304
EFAE226185:3:Tyes-18318201814
EFER585054:1:Tyes034251
ELIT314225:0:Tyes-5-607
ERUM254945:0:Tyes---0--
ERUM302409:0:Tno---0--
ESP42895:1:Tyes521304
FALN326424:0:Tyes-10---
FJOH376686:0:Tyes-----0
FMAG334413:1:Tyes--41-0
FNOD381764:0:Tyes-34160
FNUC190304:0:Tyes--0--1110
FPHI484022:1:Tyes-1203742
FRANT:0:Tno-1203760
FSP106370:0:Tyes-10---
FSP1855:0:Tyes-01---
FSUC59374:0:Tyes-102-6
FTUL351581:0:Tno-4424414434400
FTUL393011:0:Tno-3773763783750
FTUL393115:0:Tyes-1203750
FTUL401614:0:Tyes-7137127147110
FTUL418136:0:Tno-1203545
FTUL458234:0:Tno-3993984003970
GBET391165:0:Tyes--7375720
GFOR411154:0:Tyes-----0
GKAU235909:1:Tyes-451-0
GMET269799:1:Tyes-32506
GOXY290633:5:Tyes--1203
GSUL243231:0:Tyes-34160
GTHE420246:1:Tyes-451-0
GURA351605:0:Tyes-32506
GVIO251221:0:Tyes-6260--1772
HACI382638:1:Tyes---0--
HARS204773:0:Tyes203712032038
HAUR316274:2:Tyes-44312776443304434
HCHE349521:0:Tyes034251
HDUC233412:0:Tyes-213048
HHAL349124:0:Tyes1-8384820
HHEP235279:0:Tyes---0--
HINF281310:0:Tyes-989799960
HINF374930:0:Tyes-120384
HINF71421:0:Tno-908991880
HMOD498761:0:Tyes-34160
HNEP81032:0:Tyes---2-0
HPY:0:Tno---0--
HPYL357544:1:Tyes---0--
HPYL85963:0:Tno---0--
HSOM205914:1:Tyes113912031138
HSOM228400:0:Tno53120354
ILOI283942:0:Tyes521304
JSP290400:1:Tyes---7015
JSP375286:0:Tyes242112032422
KPNE272620:2:Tyes521304
KRAD266940:2:Fyes-2-406
LACI272621:0:Tyes---30-
LBIF355278:2:Tyes-0----
LBIF456481:2:Tno-0----
LBRE387344:2:Tyes-2140-
LCAS321967:1:Tyes-21405
LCHO395495:0:Tyes-3083093073100
LDEL321956:0:Tyes-6570-
LDEL390333:0:Tyes-4350-
LGAS324831:0:Tyes-23140
LHEL405566:0:Tyes-2130-
LINN272626:1:Tno-6510014
LINT363253:3:Tyes-----0
LJOH257314:0:Tyes-21304
LLAC272622:5:Tyes--6636680-
LLAC272623:0:Tyes--6906950-
LMES203120:1:Tyes-8508498560932
LMON169963:0:Tno-65-014
LMON265669:0:Tyes-65-013
LPLA220668:0:Tyes--4150
LPNE272624:0:Tno-21405
LPNE297245:1:Fno-21304
LPNE297246:1:Fyes-21304
LPNE400673:0:Tno-23140
LREU557436:0:Tyes-3250-
LSAK314315:0:Tyes-34150
LSPH444177:1:Tyes-34150
LWEL386043:0:Tyes-32-011
LXYL281090:0:Tyes----0-
MABS561007:1:Tyes-3--0-
MAER449447:0:Tyes--0-919-
MAQU351348:2:Tyes33213032
MART243272:0:Tyes--0---
MAVI243243:0:Tyes-0----
MBOV233413:0:Tno-0---9
MBOV410289:0:Tno-0---9
MCAP243233:0:Tyes8781203879
MCAP340047:0:Tyes---0--
MEXT419610:0:Tyes-37240950
MFLA265072:0:Tyes018091808181018071
MGIL350054:3:Tyes-3--0-
MLEP272631:0:Tyes-0----
MLOT266835:2:Tyes-4374072
MMAG342108:0:Tyes-2-140
MMAR394221:0:Tyes---250
MMOB267748:0:Tyes----0-
MMYC272632:0:Tyes---0--
MPET420662:1:Tyes-12032110
MSME246196:0:Tyes-0--3-
MSP164756:1:Tno-0--3-
MSP164757:0:Tno-0--3-
MSP189918:2:Tyes-0--3-
MSP266779:3:Tyes-10510601072
MSP400668:0:Tyes521304
MSP409:2:Tyes--11002850286
MSUC221988:0:Tyes84120385
MTBCDC:0:Tno-0---9
MTBRV:0:Tno-0---9
MTHE264732:0:Tyes-34150
MTUB336982:0:Tno-0---9
MTUB419947:0:Tyes-0---9
MVAN350058:0:Tyes-0----
MXAN246197:0:Tyes-230--
NARO279238:0:Tyes-2-140
NEUR228410:0:Tyes02142152132161
NEUT335283:2:Tyes125321301254
NFAR247156:2:Tyes-8--013
NGON242231:0:Tyes139321301394
NHAM323097:2:Tyes-2-140
NMEN122586:0:Tno12862852872840
NMEN122587:0:Tyes133721301338
NMEN272831:0:Tno117121301172
NMEN374833:0:Tno129721301298
NMUL323848:3:Tyes-12031550
NOCE323261:1:Tyes521304
NSEN222891:0:Tyes---0--
NSP103690:6:Tyes-8751953-33870
NSP35761:1:Tyes--1-011
NSP387092:0:Tyes-0-2--
NWIN323098:0:Tyes-2-140
OANT439375:5:Tyes-0-1473145
OCAR504832:0:Tyes-23140
OIHE221109:0:Tyes-45160
OTSU357244:0:Fyes-796-1050-
PACN267747:0:Tyes-5--0-
PAER208963:0:Tyes034251
PAER208964:0:Tno521304
PARC259536:0:Tyes13143133153120
PAST100379:0:Tyes--0---
PATL342610:0:Tyes92120393
PCAR338963:0:Tyes-32506
PCRY335284:1:Tyes13363353373340
PDIS435591:0:Tyes-----0
PENT384676:0:Tyes521304
PFLU205922:0:Tyes034251
PFLU216595:1:Tyes521304
PFLU220664:0:Tyes034251
PGIN242619:0:Tyes-----0
PHAL326442:1:Tyes045362
PING357804:0:Tyes521304
PINT246198:1:Tyes-----0
PLUM243265:0:Fyes034251
PLUT319225:0:Tyes---0--
PMAR146891:0:Tyes-1282--0952
PMAR167539:0:Tyes-1315892-0-
PMAR167540:0:Tyes----0823
PMAR167542:0:Tyes-1282--0929
PMAR167546:0:Tyes-1305--0974
PMAR167555:0:Tyes--1176-01182
PMAR59920:0:Tno--0-986-
PMAR74546:0:Tyes-1249--0920
PMAR74547:0:Tyes-1631--9620
PMAR93060:0:Tyes-1344--0967
PMEN399739:0:Tyes521304
PMOB403833:0:Tyes-34--0
PMUL272843:1:Tyes1113114-1150
PNAP365044:8:Tyes193112031930
PPEN278197:0:Tyes--3140
PPRO298386:2:Tyes521304
PPUT160488:0:Tno034251
PPUT351746:0:Tyes521304
PPUT76869:0:Tno034251
PRUM264731:0:Tyes-----0
PSP117:0:Tyes--01--
PSP296591:2:Tyes-5725735715740
PSP312153:0:Tyes13183193173200
PSP56811:2:Tyes3941203395
PSTU379731:0:Tyes034251
PSYR205918:0:Tyes034251
PSYR223283:2:Tyes034251
PTHE370438:0:Tyes-21506
RAKA293614:0:Fyes---1040-0
RALB246199:0:Tyes---0-3
RBEL336407:0:Tyes---237740
RBEL391896:0:Fno---1234076
RCAN293613:0:Fyes---921-0
RCAS383372:0:Tyes-33103331220334
RCON272944:0:Tno---1176-0
RDEN375451:4:Tyes-0-2-6
RETL347834:5:Tyes-3-250
REUT264198:3:Tyes4112130412
REUT381666:2:Tyes227512032276
RFEL315456:2:Tyes---131601029
RFER338969:1:Tyes194112031940
RLEG216596:6:Tyes-34250
RMAS416276:1:Tyes---797-0
RMET266264:2:Tyes233112032332
RPAL258594:0:Tyes-21304
RPAL316055:0:Tyes-231-0
RPAL316056:0:Tyes-23140
RPAL316057:0:Tyes-21304
RPAL316058:0:Tyes-21304
RPOM246200:1:Tyes-9-7-0
RPRO272947:0:Tyes---690-0
RRIC392021:0:Fno---1204069
RRIC452659:0:Tyes---1233071
RRUB269796:1:Tyes-23140
RSOL267608:1:Tyes191712031918
RSP101510:3:Fyes-0--5-
RSP357808:0:Tyes-32378114790
RSPH272943:4:Tyes-0-1-6
RSPH349101:2:Tno-0-1-6
RSPH349102:5:Tyes-6-5-0
RTYP257363:0:Tno---702-0
RXYL266117:0:Tyes-2-0--
SACI56780:0:Tyes-32-06
SAGA205921:0:Tno-6746736770-
SAGA208435:0:Tno-7887877910-
SAGA211110:0:Tyes-8158148200-
SALA317655:1:Tyes-7-809
SARE391037:0:Tyes-----0
SAUR158878:1:Tno-23-40
SAUR158879:1:Tno-23-40
SAUR196620:0:Tno-23-40
SAUR273036:0:Tno-23-40
SAUR282458:0:Tno-23-40
SAUR282459:0:Tno-23-40
SAUR359786:1:Tno-23-40
SAUR359787:1:Tno-23-40
SAUR367830:3:Tno-23-40
SAUR418127:0:Tyes-23-40
SAUR426430:0:Tno-23-40
SAUR93061:0:Fno-23-40
SAUR93062:1:Tno-23-40
SAVE227882:1:Fyes-2--08
SBAL399599:3:Tyes034251
SBAL402882:1:Tno034251
SBOY300268:1:Tyes521304
SCO:2:Fyes-7--90
SDEG203122:0:Tyes034251
SDEN318161:0:Tyes521304
SDYS300267:1:Tyes521304
SELO269084:0:Tyes-278304-0-
SENT209261:0:Tno521304
SENT220341:0:Tno521304
SENT295319:0:Tno521304
SENT321314:2:Tno521304
SENT454169:2:Tno521304
SEPI176279:1:Tyes-23-40
SEPI176280:0:Tno-23-40
SERY405948:0:Tyes--1-0-
SFLE198214:0:Tyes521304
SFLE373384:0:Tno034251
SFUM335543:0:Tyes-34160
SGLO343509:3:Tyes034251
SGOR29390:0:Tyes-1851841922510
SHAE279808:0:Tyes-21-04
SHAL458817:0:Tyes034251
SHIGELLA:0:Tno521304
SLAC55218:1:Fyes-0-3-7
SLOI323850:0:Tyes034251
SMED366394:3:Tyes-34260
SMEL266834:2:Tyes-34260
SMUT210007:0:Tyes-230389178
SONE211586:1:Tyes034251
SPEA398579:0:Tno034251
SPNE1313:0:Tyes-340476470
SPNE170187:0:Tyes-340318313
SPNE171101:0:Tno--50495489
SPNE487213:0:Tno--5880131137
SPNE487214:0:Tno-340541535
SPNE488221:0:Tno-340508503
SPRO399741:1:Tyes034251
SPYO160490:0:Tno--103960-
SPYO186103:0:Tno--102950-
SPYO193567:0:Tno--07--
SPYO198466:0:Tno--100930-
SPYO286636:0:Tno--105970-
SPYO293653:0:Tno--106980-
SPYO319701:0:Tyes--1091010-
SPYO370551:0:Tno--1081010-
SPYO370552:0:Tno--1081000-
SPYO370553:0:Tno---1050-
SPYO370554:0:Tyes--1141050-
SRUB309807:1:Tyes---0-1
SSAP342451:2:Tyes-21-06
SSED425104:0:Tyes034251
SSON300269:1:Tyes521304
SSP1131:0:Tyes-0778-532770
SSP1148:0:Tyes-12800-585-
SSP292414:2:Tyes-6-4-0
SSP321327:0:Tyes-425668-5160
SSP321332:0:Tyes--938-25670
SSP387093:0:Tyes---0--
SSP644076:6:Fyes-7-4-0
SSP64471:0:Tyes-0--1934549
SSP84588:0:Tyes-01480-16991488
SSP94122:1:Tyes521304
SSUI391295:0:Tyes-4824834590539
SSUI391296:0:Tyes--4934700552
STHE264199:0:Tyes-2172163360-
STHE292459:0:Tyes-45-60
STHE299768:0:Tno-2322313540-
STHE322159:2:Tyes-2162153230-
STRO369723:0:Tyes--7--0
STYP99287:1:Tyes521304
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TFUS269800:0:Tyes-34-50
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TMAR243274:0:Tyes-34160
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TPSE340099:0:Tyes-103-4
TROS309801:1:Tyes-0113-8911651
TSP1755:0:Tyes-103-4
TSP28240:0:Tyes-34160
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TTHE262724:1:Tyes-0-2--
TTHE300852:2:Tyes-0-2--
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ZMOB264203:0:Tyes--3140



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