Org ID | Org Name | # genes in group found in org |
YPSE349747 ncbi | Yersinia pseudotuberculosis IP 31758 | 6 |
YPSE273123 ncbi | Yersinia pseudotuberculosis IP 32953 | 6 |
YPES386656 ncbi | Yersinia pestis Pestoides F | 6 |
YPES377628 ncbi | Yersinia pestis Nepal516 | 6 |
YPES360102 ncbi | Yersinia pestis Antiqua | 6 |
YPES349746 ncbi | Yersinia pestis Angola | 6 |
YPES214092 ncbi | Yersinia pestis CO92 | 6 |
YPES187410 ncbi | Yersinia pestis KIM 10 | 6 |
YENT393305 ncbi | Yersinia enterocolitica enterocolitica 8081 | 6 |
XORY360094 ncbi | Xanthomonas oryzae pv. oryzae PXO99A | 6 |
XORY342109 ncbi | Xanthomonas oryzae pv. oryzae MAFF 311018 | 6 |
XORY291331 ncbi | Xanthomonas oryzae pv. oryzae KACC10331 | 6 |
XFAS405440 ncbi | Xylella fastidiosa M12 | 6 |
XFAS183190 ncbi | Xylella fastidiosa Temecula1 | 6 |
XFAS160492 ncbi | Xylella fastidiosa 9a5c | 6 |
XCAM487884 | Xanthomonas campestris pv. paulliniae | 6 |
XCAM316273 ncbi | Xanthomonas campestris pv. vesicatoria str. 85-10 | 6 |
XCAM314565 ncbi | Xanthomonas campestris pv. campestris str. 8004 | 6 |
XCAM190485 ncbi | Xanthomonas campestris pv. campestris str. ATCC 33913 | 6 |
XAXO190486 ncbi | Xanthomonas axonopodis pv. citri str. 306 | 6 |
VVUL216895 ncbi | Vibrio vulnificus CMCP6 | 6 |
VVUL196600 ncbi | Vibrio vulnificus YJ016 | 6 |
VPAR223926 ncbi | Vibrio parahaemolyticus RIMD 2210633 | 6 |
VFIS312309 ncbi | Vibrio fischeri ES114 | 6 |
VEIS391735 ncbi | Verminephrobacter eiseniae EF01-2 | 6 |
VCHO345073 ncbi | Vibrio cholerae O395 | 6 |
VCHO ncbi | Vibrio cholerae O1 biovar El Tor str. N16961 | 6 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 6 |
TSP28240 | Thermotoga sp. | 5 |
TPET390874 ncbi | Thermotoga petrophila RKU-1 | 5 |
TMAR243274 ncbi | Thermotoga maritima MSB8 | 5 |
TCRU317025 ncbi | Thiomicrospira crunogena XCL-2 | 6 |
SWOL335541 ncbi | Syntrophomonas wolfei wolfei Goettingen | 5 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 6 |
SSUI391295 ncbi | Streptococcus suis 05ZYH33 | 5 |
SSP94122 ncbi | Shewanella sp. ANA-3 | 6 |
SSON300269 ncbi | Shigella sonnei Ss046 | 6 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 6 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 6 |
SPNE488221 ncbi | Streptococcus pneumoniae 70585 | 5 |
SPNE487214 ncbi | Streptococcus pneumoniae Hungary19A-6 | 5 |
SPNE170187 ncbi | Streptococcus pneumoniae G54 | 5 |
SPNE1313 | Streptococcus pneumoniae | 5 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 6 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 6 |
SMUT210007 ncbi | Streptococcus mutans UA159 | 5 |
SMEL266834 ncbi | Sinorhizobium meliloti 1021 | 5 |
SMED366394 ncbi | Sinorhizobium medicae WSM419 | 5 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 6 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 6 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 6 |
SGOR29390 | Streptococcus gordonii Challis | 5 |
SGLO343509 ncbi | Sodalis glossinidius morsitans | 6 |
SFUM335543 ncbi | Syntrophobacter fumaroxidans MPOB | 5 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 6 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 6 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 6 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 6 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 6 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 6 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 6 |
SDYS300267 ncbi | Shigella dysenteriae Sd197 | 6 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 6 |
SDEG203122 ncbi | Saccharophagus degradans 2-40 | 6 |
SBOY300268 ncbi | Shigella boydii Sb227 | 6 |
SBAL402882 ncbi | Shewanella baltica OS185 | 6 |
SBAL399599 ncbi | Shewanella baltica OS195 | 6 |
RSP357808 ncbi | Roseiflexus sp. RS-1 | 5 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 6 |
RRUB269796 ncbi | Rhodospirillum rubrum ATCC 11170 | 5 |
RPAL316058 ncbi | Rhodopseudomonas palustris HaA2 | 5 |
RPAL316057 ncbi | Rhodopseudomonas palustris BisB5 | 5 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 5 |
RPAL258594 ncbi | Rhodopseudomonas palustris CGA009 | 5 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 6 |
RLEG216596 ncbi | Rhizobium leguminosarum bv. viciae 3841 | 5 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 6 |
REUT381666 ncbi | Ralstonia eutropha H16 | 6 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 6 |
RCAS383372 ncbi | Roseiflexus castenholzii DSM 13941 | 5 |
PTHE370438 ncbi | Pelotomaculum thermopropionicum SI | 5 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 6 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 6 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 6 |
PSP56811 | Psychrobacter sp. | 6 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 6 |
PSP296591 ncbi | Polaromonas sp. JS666 | 5 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 6 |
PPUT351746 ncbi | Pseudomonas putida F1 | 6 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 6 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 6 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 6 |
PMUL272843 ncbi | Pasteurella multocida multocida Pm70 | 5 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 6 |
PLUM243265 ncbi | Photorhabdus luminescens laumondii TTO1 | 6 |
PING357804 ncbi | Psychromonas ingrahamii 37 | 6 |
PHAL326442 ncbi | Pseudoalteromonas haloplanktis TAC125 | 6 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 6 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 6 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 6 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 6 |
PCRY335284 ncbi | Psychrobacter cryohalolentis K5 | 6 |
PCAR338963 ncbi | Pelobacter carbinolicus DSM 2380 | 5 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 6 |
PARC259536 ncbi | Psychrobacter arcticus 273-4 | 6 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 6 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 6 |
OIHE221109 ncbi | Oceanobacillus iheyensis HTE831 | 5 |
OCAR504832 ncbi | Oligotropha carboxidovorans OM5 | 5 |
NOCE323261 ncbi | Nitrosococcus oceani ATCC 19707 | 6 |
NMUL323848 ncbi | Nitrosospira multiformis ATCC 25196 | 5 |
NMEN374833 ncbi | Neisseria meningitidis 053442 | 6 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 6 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 6 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 6 |
NGON242231 ncbi | Neisseria gonorrhoeae FA 1090 | 6 |
NEUT335283 ncbi | Nitrosomonas eutropha C91 | 6 |
NEUR228410 ncbi | Nitrosomonas europaea ATCC 19718 | 6 |
MTHE264732 ncbi | Moorella thermoacetica ATCC 39073 | 5 |
MSUC221988 ncbi | Mannheimia succiniciproducens MBEL55E | 6 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 6 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 5 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 5 |
MLOT266835 ncbi | Mesorhizobium loti MAFF303099 | 5 |
MFLA265072 ncbi | Methylobacillus flagellatus KT | 6 |
MEXT419610 ncbi | Methylobacterium extorquens PA1 | 5 |
MCAP243233 ncbi | Methylococcus capsulatus Bath | 6 |
MAQU351348 ncbi | Marinobacter aquaeolei VT8 | 6 |
LSPH444177 ncbi | Lysinibacillus sphaericus C3-41 | 5 |
LSAK314315 ncbi | Lactobacillus sakei sakei 23K | 5 |
LPNE400673 ncbi | Legionella pneumophila Corby | 5 |
LPNE297246 ncbi | Legionella pneumophila Paris | 5 |
LPNE297245 ncbi | Legionella pneumophila Lens | 5 |
LPNE272624 ncbi | Legionella pneumophila pneumophila Philadelphia 1 | 5 |
LMES203120 ncbi | Leuconostoc mesenteroides mesenteroides ATCC 8293 | 5 |
LJOH257314 ncbi | Lactobacillus johnsonii NCC 533 | 5 |
LINN272626 ncbi | Listeria innocua Clip11262 | 5 |
LGAS324831 ncbi | Lactobacillus gasseri ATCC 33323 | 5 |
LCHO395495 ncbi | Leptothrix cholodnii SP-6 | 5 |
LCAS321967 ncbi | Lactobacillus casei ATCC 334 | 5 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 6 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 6 |
ILOI283942 ncbi | Idiomarina loihiensis L2TR | 6 |
HSOM228400 ncbi | Haemophilus somnus 2336 | 6 |
HSOM205914 ncbi | Haemophilus somnus 129PT | 6 |
HMOD498761 ncbi | Heliobacterium modesticaldum Ice1 | 5 |
HINF71421 ncbi | Haemophilus influenzae Rd KW20 | 5 |
HINF374930 ncbi | Haemophilus influenzae PittEE | 5 |
HINF281310 ncbi | Haemophilus influenzae 86-028NP | 5 |
HHAL349124 ncbi | Halorhodospira halophila SL1 | 5 |
HDUC233412 ncbi | Haemophilus ducreyi 35000HP | 5 |
HCHE349521 ncbi | Hahella chejuensis KCTC 2396 | 6 |
HAUR316274 ncbi | Herpetosiphon aurantiacus ATCC 23779 | 5 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 6 |
GURA351605 ncbi | Geobacter uraniireducens Rf4 | 5 |
GSUL243231 ncbi | Geobacter sulfurreducens PCA | 5 |
GMET269799 ncbi | Geobacter metallireducens GS-15 | 5 |
FTUL458234 ncbi | Francisella tularensis holarctica FTNF002-00 | 5 |
FTUL418136 ncbi | Francisella tularensis tularensis WY96-3418 | 5 |
FTUL401614 ncbi | Francisella novicida U112 | 5 |
FTUL393115 ncbi | Francisella tularensis tularensis FSC198 | 5 |
FTUL393011 ncbi | Francisella tularensis holarctica OSU18 | 5 |
FTUL351581 | Francisella tularensis holarctica FSC200 | 5 |
FRANT ncbi | Francisella tularensis tularensis SCHU S4 | 5 |
FPHI484022 ncbi | Francisella philomiragia philomiragia ATCC 25017 | 5 |
FNOD381764 ncbi | Fervidobacterium nodosum Rt17-B1 | 5 |
ESP42895 | Enterobacter sp. | 6 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 6 |
EFAE226185 ncbi | Enterococcus faecalis V583 | 5 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 6 |
ECOL83334 | Escherichia coli O157:H7 | 6 |
ECOL585397 ncbi | Escherichia coli ED1a | 6 |
ECOL585057 ncbi | Escherichia coli IAI39 | 6 |
ECOL585056 ncbi | Escherichia coli UMN026 | 6 |
ECOL585055 ncbi | Escherichia coli 55989 | 6 |
ECOL585035 ncbi | Escherichia coli S88 | 6 |
ECOL585034 ncbi | Escherichia coli IAI1 | 6 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 6 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 6 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 6 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 6 |
ECOL409438 ncbi | Escherichia coli SE11 | 6 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 6 |
ECOL364106 ncbi | Escherichia coli UTI89 | 6 |
ECOL362663 ncbi | Escherichia coli 536 | 6 |
ECOL331111 ncbi | Escherichia coli E24377A | 6 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 6 |
ECOL199310 ncbi | Escherichia coli CFT073 | 6 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 6 |
DRED349161 ncbi | Desulfotomaculum reducens MI-1 | 5 |
DNOD246195 ncbi | Dichelobacter nodosus VCS1703A | 5 |
DHAF138119 ncbi | Desulfitobacterium hafniense Y51 | 5 |
DARO159087 ncbi | Dechloromonas aromatica RCB | 5 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 6 |
CVES412965 ncbi | Candidatus Vesicomyosocius okutanii HA | 6 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 6 |
CRUT413404 ncbi | Candidatus Ruthia magnifica Cm (Calyptogena magnifica) | 6 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 6 |
CPER195103 ncbi | Clostridium perfringens ATCC 13124 | 5 |
CPER195102 ncbi | Clostridium perfringens 13 | 5 |
CKLU431943 ncbi | Clostridium kluyveri DSM 555 | 5 |
CJAP155077 | Cellvibrio japonicus | 6 |
CDIF272563 ncbi | Clostridium difficile 630 | 5 |
CDES477974 ncbi | Candidatus Desulforudis audaxviator MP104C | 5 |
CBUR434922 ncbi | Coxiella burnetii Dugway 5J108-111 | 6 |
CBUR360115 ncbi | Coxiella burnetii RSA 331 | 6 |
CBUR227377 ncbi | Coxiella burnetii RSA 493 | 6 |
CBLO291272 ncbi | Candidatus Blochmannia pennsylvanicus BPEN | 5 |
BWEI315730 ncbi | Bacillus weihenstephanensis KBAB4 | 5 |
BTHU412694 ncbi | Bacillus thuringiensis Al Hakam | 5 |
BTHU281309 ncbi | Bacillus thuringiensis serovar konkukian str. 97-27 | 5 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 5 |
BSUB ncbi | Bacillus subtilis subtilis 168 | 5 |
BSP376 | Bradyrhizobium sp. | 5 |
BSP36773 | Burkholderia sp. | 5 |
BSP107806 ncbi | Buchnera aphidicola APS (Acyrthosiphon pisum) | 5 |
BPUM315750 ncbi | Bacillus pumilus SAFR-032 | 5 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 5 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 5 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 5 |
BPET94624 | Bordetella petrii | 5 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 5 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 5 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 5 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 5 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 5 |
BLIC279010 ncbi | Bacillus licheniformis ATCC 14580 | 5 |
BJAP224911 ncbi | Bradyrhizobium japonicum USDA 110 | 5 |
BHAL272558 ncbi | Bacillus halodurans C-125 | 5 |
BCLA66692 ncbi | Bacillus clausii KSM-K16 | 5 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 5 |
BCER572264 ncbi | Bacillus cereus 03BB102 | 5 |
BCER405917 | Bacillus cereus W | 5 |
BCER315749 ncbi | Bacillus cytotoxicus NVH 391-98 | 5 |
BCER288681 ncbi | Bacillus cereus E33L | 5 |
BCER226900 ncbi | Bacillus cereus ATCC 14579 | 5 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 5 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 5 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 5 |
BAPH198804 ncbi | Buchnera aphidicola Sg (Schizaphis graminum) | 5 |
BANT592021 ncbi | Bacillus anthracis A0248 | 5 |
BANT568206 ncbi | Bacillus anthracis CDC 684 | 5 |
BANT261594 ncbi | Bacillus anthracis Ames Ancestor | 5 |
BANT260799 ncbi | Bacillus anthracis Sterne | 5 |
BAMY326423 ncbi | Bacillus amyloliquefaciens FZB42 | 5 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 5 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 5 |
ASP76114 ncbi | Aromatoleum aromaticum EbN1 | 5 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 6 |
ASP62928 ncbi | Azoarcus sp. BH72 | 6 |
ASP232721 ncbi | Acidovorax sp. JS42 | 6 |
ASAL382245 ncbi | Aeromonas salmonicida salmonicida A449 | 6 |
APLE434271 ncbi | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 6 |
APLE416269 ncbi | Actinobacillus pleuropneumoniae L20 | 6 |
AORE350688 ncbi | Alkaliphilus oremlandii OhILAs | 5 |
AHYD196024 | Aeromonas hydrophila dhakensis | 6 |
AFER243159 ncbi | Acidithiobacillus ferrooxidans ATCC 23270 | 5 |
AEHR187272 ncbi | Alkalilimnicola ehrlichii MLHE-1 | 6 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 6 |
ABAU360910 ncbi | Bordetella avium 197N | 5 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 5 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Pairs | 0.0063542 | 58 | 112 |
Disease:Bubonic_plague | 0.0054466 | 6 | 6 |
Disease:Dysentery | 0.0054466 | 6 | 6 |
Disease:Gastroenteritis | 0.0093127 | 10 | 13 |
Endospores:No | 6.639e-16 | 44 | 211 |
GC_Content_Range4:0-40 | 1.253e-11 | 52 | 213 |
GC_Content_Range4:40-60 | 2.885e-8 | 126 | 224 |
GC_Content_Range7:0-30 | 5.272e-6 | 6 | 47 |
GC_Content_Range7:30-40 | 2.702e-6 | 46 | 166 |
GC_Content_Range7:50-60 | 1.366e-6 | 67 | 107 |
GC_Content_Range7:60-70 | 0.0059661 | 68 | 134 |
Genome_Size_Range5:0-2 | 2.133e-16 | 24 | 155 |
Genome_Size_Range5:2-4 | 0.0002143 | 64 | 197 |
Genome_Size_Range5:4-6 | 2.211e-21 | 130 | 184 |
Genome_Size_Range5:6-10 | 0.0054643 | 28 | 47 |
Genome_Size_Range9:0-1 | 0.0015552 | 4 | 27 |
Genome_Size_Range9:1-2 | 4.867e-13 | 20 | 128 |
Genome_Size_Range9:2-3 | 0.0007691 | 36 | 120 |
Genome_Size_Range9:4-5 | 2.278e-6 | 61 | 96 |
Genome_Size_Range9:5-6 | 5.773e-14 | 69 | 88 |
Genome_Size_Range9:6-8 | 0.0001461 | 27 | 38 |
Gram_Stain:Gram_Neg | 5.025e-17 | 189 | 333 |
Gram_Stain:Gram_Pos | 3.981e-7 | 38 | 150 |
Habitat:Host-associated | 0.0035226 | 73 | 206 |
Habitat:Multiple | 0.0000555 | 96 | 178 |
Habitat:Specialized | 0.0056591 | 14 | 53 |
Motility:No | 7.846e-11 | 31 | 151 |
Motility:Yes | 5.447e-11 | 151 | 267 |
Optimal_temp.:- | 0.0021528 | 124 | 257 |
Optimal_temp.:25-30 | 0.0001531 | 16 | 19 |
Optimal_temp.:30-37 | 0.0005900 | 1 | 18 |
Optimal_temp.:35-37 | 0.0000111 | 13 | 13 |
Optimal_temp.:37 | 0.0032545 | 33 | 106 |
Oxygen_Req:Anaerobic | 8.855e-6 | 24 | 102 |
Oxygen_Req:Facultative | 1.327e-7 | 114 | 201 |
Pathogenic_in:Animal | 0.0014520 | 39 | 66 |
Pathogenic_in:No | 0.0071426 | 83 | 226 |
Shape:Coccus | 2.151e-6 | 16 | 82 |
Shape:Rod | 4.224e-18 | 196 | 347 |
Shape:Sphere | 0.0024303 | 2 | 19 |
Shape:Spiral | 0.0000731 | 4 | 34 |
Temp._range:Hyperthermophilic | 0.0003696 | 2 | 23 |
Temp._range:Mesophilic | 0.0006628 | 214 | 473 |
Temp._range:Psychrophilic | 0.0049584 | 8 | 9 |
Temp._range:Thermophilic | 0.0028401 | 7 | 35 |
Org ID | Org Name | # genes in group found in org |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
UMET351160 ncbi | uncultured methanogenic archaeon RC-I | 0 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 0 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 0 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 0 |
TPEN368408 ncbi | Thermofilum pendens Hrk 5 | 0 |
TKOD69014 ncbi | Thermococcus kodakarensis KOD1 | 0 |
TDEN326298 ncbi | Sulfurimonas denitrificans DSM 1251 | 1 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
SSP387093 ncbi | Sulfurovum sp. NBC37-1 | 1 |
SSOL273057 ncbi | Sulfolobus solfataricus P2 | 0 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 0 |
SARE391037 ncbi | Salinispora arenicola CNS-205 | 1 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RSAL288705 ncbi | Renibacterium salmoninarum ATCC 33209 | 0 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 0 |
PRUM264731 ncbi | Prevotella ruminicola 23 | 1 |
PLUT319225 ncbi | Chlorobium luteolum DSM 273 | 1 |
PISL384616 ncbi | Pyrobaculum islandicum DSM 4184 | 0 |
PINT246198 | Prevotella intermedia 17 | 1 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PGIN242619 ncbi | Porphyromonas gingivalis W83 | 1 |
PFUR186497 ncbi | Pyrococcus furiosus DSM 3638 | 0 |
PDIS435591 ncbi | Parabacteroides distasonis ATCC 8503 | 1 |
PAST100379 | Onion yellows phytoplasma | 1 |
PARS340102 ncbi | Pyrobaculum arsenaticum DSM 13514 | 0 |
PAER178306 ncbi | Pyrobaculum aerophilum IM2 | 0 |
PABY272844 ncbi | Pyrococcus abyssi GE5 | 0 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 1 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
MVAN350058 ncbi | Mycobacterium vanbaalenii PYR-1 | 1 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 0 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 0 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 0 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 0 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 0 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 0 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 0 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 1 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 1 |
MMAZ192952 ncbi | Methanosarcina mazei Go1 | 0 |
MMAR444158 ncbi | Methanococcus maripaludis C6 | 0 |
MMAR426368 ncbi | Methanococcus maripaludis C7 | 0 |
MMAR402880 ncbi | Methanococcus maripaludis C5 | 0 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 0 |
MMAR267377 ncbi | Methanococcus maripaludis S2 | 0 |
MLEP272631 ncbi | Mycobacterium leprae TN | 1 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 0 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 0 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 0 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 0 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 0 |
MHUN323259 ncbi | Methanospirillum hungatei JF-1 | 0 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MFLO265311 ncbi | Mesoplasma florum L1 | 0 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 1 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 0 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 0 |
MAVI243243 ncbi | Mycobacterium avium 104 | 1 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 1 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 0 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 0 |
LXYL281090 ncbi | Leifsonia xyli xyli CTCB07 | 1 |
LINT363253 ncbi | Lawsonia intracellularis PHE/MN1-00 | 1 |
LINT267671 ncbi | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 0 |
LINT189518 ncbi | Leptospira interrogans serovar Lai str. 56601 | 0 |
LBOR355277 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 0 |
LBOR355276 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 0 |
LBIF456481 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) | 1 |
LBIF355278 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) | 1 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 0 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 0 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 0 |
HPYL85963 ncbi | Helicobacter pylori J99 | 1 |
HPYL357544 ncbi | Helicobacter pylori HPAG1 | 1 |
HPY ncbi | Helicobacter pylori 26695 | 1 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 0 |
HMAR272569 ncbi | Haloarcula marismortui ATCC 43049 | 0 |
HHEP235279 ncbi | Helicobacter hepaticus ATCC 51449 | 1 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
HACI382638 ncbi | Helicobacter acinonychis Sheeba | 1 |
GFOR411154 ncbi | Gramella forsetii KT0803 | 1 |
FJOH376686 ncbi | Flavobacterium johnsoniae UW101 | 1 |
ERUM302409 ncbi | Ehrlichia ruminantium Gardel | 1 |
ERUM254945 ncbi | Ehrlichia ruminantium Welgevonden | 1 |
ECHA205920 ncbi | Ehrlichia chaffeensis Arkansas | 1 |
ECAN269484 ncbi | Ehrlichia canis Jake | 1 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 1 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 1 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 1 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 1 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 1 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 1 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 1 |
CMIC443906 ncbi | Clavibacter michiganensis michiganensis NCPPB 382 | 1 |
CMIC31964 ncbi | Clavibacter michiganensis sepedonicus | 1 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 0 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 0 |
CJEJ407148 ncbi | Campylobacter jejuni jejuni 81116 | 1 |
CJEJ354242 ncbi | Campylobacter jejuni jejuni 81-176 | 1 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 1 |
CHUT269798 ncbi | Cytophaga hutchinsonii ATCC 33406 | 1 |
CHOM360107 ncbi | Campylobacter hominis ATCC BAA-381 | 1 |
CGLU196627 ncbi | Corynebacterium glutamicum ATCC 13032 | 1 |
CFET360106 ncbi | Campylobacter fetus fetus 82-40 | 1 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 1 |
CEFF196164 ncbi | Corynebacterium efficiens YS-314 | 1 |
CDIP257309 ncbi | Corynebacterium diphtheriae NCTC 13129 | 1 |
CCUR360105 ncbi | Campylobacter curvus 525.92 | 1 |
CCON360104 ncbi | Campylobacter concisus 13826 | 1 |
CCHL340177 ncbi | Chlorobium chlorochromatii CaD3 | 0 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 1 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 1 |
BXEN266265 ncbi | Burkholderia xenovorans LB400 | 0 |
BTUR314724 ncbi | Borrelia turicatae 91E135 | 1 |
BTHE226186 ncbi | Bacteroides thetaiotaomicron VPI-5482 | 1 |
BLON206672 ncbi | Bifidobacterium longum NCC2705 | 0 |
BHER314723 ncbi | Borrelia hermsii DAH | 1 |
BFRA295405 ncbi | Bacteroides fragilis YCH46 | 1 |
BFRA272559 ncbi | Bacteroides fragilis NCTC 9343 | 1 |
BBUR224326 ncbi | Borrelia burgdorferi B31 | 1 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 1 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
ASP1667 | Arthrobacter sp. | 1 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
AMAR234826 ncbi | Anaplasma marginale St. Maries | 1 |
ALAI441768 ncbi | Acholeplasma laidlawii PG-8A | 1 |
AFUL224325 ncbi | Archaeoglobus fulgidus DSM 4304 | 0 |
ABUT367737 ncbi | Arcobacter butzleri RM4018 | 1 |
AAUR290340 ncbi | Arthrobacter aurescens TC1 | 1 |
AAEO224324 ncbi | Aquifex aeolicus VF5 | 1 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Aggregates | 0.0051332 | 6 | 9 |
Arrangment:Chains | 0.0000991 | 8 | 92 |
Arrangment:Pairs | 0.0001816 | 12 | 112 |
Arrangment:Singles | 7.368e-6 | 87 | 286 |
Disease:Leptospirosis | 0.0026148 | 4 | 4 |
Disease:Pharyngitis | 6.212e-6 | 8 | 8 |
Disease:bronchitis_and_pneumonitis | 6.212e-6 | 8 | 8 |
Endospores:No | 3.380e-15 | 87 | 211 |
Endospores:Yes | 9.162e-6 | 1 | 53 |
GC_Content_Range4:0-40 | 0.0033693 | 61 | 213 |
GC_Content_Range4:60-100 | 0.0001614 | 18 | 145 |
GC_Content_Range7:0-30 | 0.0000942 | 22 | 47 |
GC_Content_Range7:40-50 | 0.0012249 | 39 | 117 |
GC_Content_Range7:50-60 | 0.0051384 | 15 | 107 |
GC_Content_Range7:60-70 | 0.0001744 | 16 | 134 |
Genome_Size_Range5:0-2 | 1.342e-16 | 74 | 155 |
Genome_Size_Range5:4-6 | 3.160e-11 | 13 | 184 |
Genome_Size_Range5:6-10 | 0.0057010 | 4 | 47 |
Genome_Size_Range9:0-1 | 8.258e-9 | 20 | 27 |
Genome_Size_Range9:1-2 | 1.113e-8 | 54 | 128 |
Genome_Size_Range9:4-5 | 0.0000112 | 7 | 96 |
Genome_Size_Range9:5-6 | 0.0000158 | 6 | 88 |
Gram_Stain:Gram_Neg | 0.0016992 | 62 | 333 |
Gram_Stain:Gram_Pos | 8.517e-6 | 16 | 150 |
Habitat:Host-associated | 0.0013622 | 61 | 206 |
Habitat:Multiple | 2.258e-6 | 20 | 178 |
Habitat:Specialized | 0.0007244 | 22 | 53 |
Motility:No | 0.0033288 | 46 | 151 |
Optimal_temp.:- | 0.0003124 | 42 | 257 |
Optimal_temp.:37 | 0.0002922 | 38 | 106 |
Optimal_temp.:85 | 0.0026148 | 4 | 4 |
Oxygen_Req:Anaerobic | 2.206e-6 | 42 | 102 |
Oxygen_Req:Facultative | 0.0000106 | 26 | 201 |
Salinity:Extreme_halophilic | 0.0074119 | 5 | 7 |
Shape:Irregular_coccus | 1.063e-8 | 15 | 17 |
Shape:Pleomorphic | 0.0021961 | 6 | 8 |
Shape:Rod | 3.637e-9 | 50 | 347 |
Shape:Sphere | 1.252e-8 | 16 | 19 |
Shape:Spiral | 4.505e-7 | 21 | 34 |
Temp._range:Hyperthermophilic | 1.175e-8 | 18 | 23 |
Temp._range:Mesophilic | 0.0013782 | 96 | 473 |
Org ID | Org Name | Pvalue | # genes in tgt genome found in org | # genes in group found in org |
CVES412965 ncbi | Candidatus Vesicomyosocius okutanii HA | 0.0057565 | 732 | 6 |
CRUT413404 ncbi | Candidatus Ruthia magnifica Cm (Calyptogena magnifica) | 0.0069350 | 755 | 6 |
G7355 | EG11153 | EG11023 | EG10915 | EG10880 | EG10300 | |
CVES412965 | COSY_0558 | COSY_0884 | COSY_0261 | COSY_0885 | COSY_0797 | COSY_0557 |
CRUT413404 | RMAG_0605 | RMAG_0989 | RMAG_0275 | RMAG_0990 | RMAG_0872 | RMAG_0604 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis) | 218 | 177 | 0.5844 |
GLYCOCAT-PWY (glycogen degradation I) | 246 | 183 | 0.5320 |
PWY-5386 (methylglyoxal degradation I) | 305 | 203 | 0.4896 |
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate)) | 300 | 200 | 0.4839 |
PWY-5918 (heme biosynthesis I) | 272 | 186 | 0.4726 |
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) | 195 | 149 | 0.4722 |
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I) | 286 | 189 | 0.4517 |
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic)) | 291 | 190 | 0.4440 |
LIPA-CORESYN-PWY (Lipid A-core biosynthesis) | 176 | 135 | 0.4427 |
PHOSLIPSYN-PWY (phospholipid biosynthesis I) | 290 | 189 | 0.4403 |
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I) | 225 | 159 | 0.4385 |
GLUTATHIONESYN-PWY (glutathione biosynthesis) | 339 | 209 | 0.4375 |
ECASYN-PWY (enterobacterial common antigen biosynthesis) | 191 | 142 | 0.4373 |
PWY0-1319 (CDP-diacylglycerol biosynthesis II) | 296 | 191 | 0.4364 |
AST-PWY (arginine degradation II (AST pathway)) | 120 | 103 | 0.4350 |
PWY-1269 (CMP-KDO biosynthesis I) | 325 | 202 | 0.4288 |
PWY-4041 (γ-glutamyl cycle) | 279 | 182 | 0.4260 |
PWY-6196 (serine racemization) | 102 | 91 | 0.4244 |
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic)) | 183 | 135 | 0.4167 |
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation) | 149 | 116 | 0.4086 |
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi)) | 81 | 76 | 0.4069 |
TYRFUMCAT-PWY (tyrosine degradation I) | 184 | 134 | 0.4059 |
EG11153 | EG11023 | EG10915 | EG10880 | EG10300 | |
G7355 | 0.999445 | 0.999407 | 0.999498 | 0.999379 | 0.99981 |
EG11153 | 0.999994 | 0.999992 | 0.999968 | 0.999904 | |
EG11023 | 0.999972 | 0.999981 | 0.999854 | ||
EG10915 | 0.999939 | 0.999945 | |||
EG10880 | 0.99981 | ||||
EG10300 |
G7355 | EG11153 | EG11023 | EG10915 | EG10880 | EG10300 | |
G7355 | 0.0f0 | - | - | - | - | - |
EG11153 | - | 0.0f0 | - | - | - | - |
EG11023 | - | - | 0.0f0 | - | - | - |
EG10915 | - | - | - | 0.0f0 | - | - |
EG10880 | - | - | - | - | 0.0f0 | - |
EG10300 | - | - | - | - | - | 0.0f0 |