CANDIDATE ID: 155

CANDIDATE ID: 155

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9959753e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.6666667e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6780 (ddpB) (b1486)
   Products of gene:
     - YDDR-MONOMER (YddR)
     - ABC-59-CPLX (YddO/YddP/YddQ/YddR/YddS ABC transporter)

- G6432 (gsiD) (b0832)
   Products of gene:
     - YLID-MONOMER (GsiD)
     - ABC-49-CPLX (gsiABCD glutathione ABC transporter)
       Reactions:
        glutathione[periplasmic space] + ATP + H2O  ->  glutathione[cytosol] + ADP + phosphate

- G6431 (gsiC) (b0831)
   Products of gene:
     - YLIC-MONOMER (GsiC)
     - ABC-49-CPLX (gsiABCD glutathione ABC transporter)
       Reactions:
        glutathione[periplasmic space] + ATP + H2O  ->  glutathione[cytosol] + ADP + phosphate

- G6430 (gsiB) (b0830)
   Products of gene:
     - YLIB-MONOMER (GsiB)
     - ABC-49-CPLX (gsiABCD glutathione ABC transporter)
       Reactions:
        glutathione[periplasmic space] + ATP + H2O  ->  glutathione[cytosol] + ADP + phosphate

- EG12625 (dppB) (b3543)
   Products of gene:
     - DPPB-MONOMER (DppB)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG10248 (dppA) (b3544)
   Products of gene:
     - DPPA-MONOMER (DppA)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 170
Effective number of orgs (counting one per cluster within 468 clusters): 113

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
TTHE300852 ncbi Thermus thermophilus HB85
TTHE262724 ncbi Thermus thermophilus HB276
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP28240 Thermotoga sp.5
TROS309801 ncbi Thermomicrobium roseum DSM 51596
TPET390874 ncbi Thermotoga petrophila RKU-15
TMAR243274 ncbi Thermotoga maritima MSB85
TLET416591 ncbi Thermotoga lettingae TMO6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STRO369723 ncbi Salinispora tropica CNB-4406
STHE292459 ncbi Symbiobacterium thermophilum IAM 148636
SSP644076 Silicibacter sp. TrichCH4B6
SSP292414 ncbi Ruegeria sp. TM10406
SSON300269 ncbi Shigella sonnei Ss0466
SPRO399741 ncbi Serratia proteamaculans 5686
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLAC55218 Ruegeria lacuscaerulensis6
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SBOY300268 ncbi Shigella boydii Sb2276
SARE391037 ncbi Salinispora arenicola CNS-2056
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99416
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170256
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170296
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPOM246200 ncbi Ruegeria pomeroyi DSS-36
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 426
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC16
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MACE188937 ncbi Methanosarcina acetivorans C2A6
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
KRAD266940 ncbi Kineococcus radiotolerans SRS302166
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
HPYL85963 ncbi Helicobacter pylori J995
HPYL357544 ncbi Helicobacter pylori HPAG15
HPY ncbi Helicobacter pylori 266956
HMUK485914 ncbi Halomicrobium mukohataei DSM 122865
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HACI382638 ncbi Helicobacter acinonychis Sheeba6
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-26
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255865
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DRED349161 ncbi Desulfotomaculum reducens MI-16
DRAD243230 ncbi Deinococcus radiodurans R16
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DGEO319795 ncbi Deinococcus geothermalis DSM 113005
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G205
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CSP501479 Citreicella sp. SE456
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF85
CKLU431943 ncbi Clostridium kluyveri DSM 5556
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.6
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23086
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M6
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K166
BCER288681 ncbi Bacillus cereus E33L6
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AORE350688 ncbi Alkaliphilus oremlandii OhILAs6
AMET293826 ncbi Alkaliphilus metalliredigens QYMF6
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABAU360910 ncbi Bordetella avium 197N6
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  G6780   G6432   G6431   G6430   EG12625   EG10248   
YPSE349747 YPSIP31758_4074YPSIP31758_4073YPSIP31758_4075YPSIP31758_4074YPSIP31758_4075
YPSE273123 YPTB3841YPTB3840YPTB3842YPTB3841YPTB3842
YPES377628 YPN_3651YPN_3650YPN_3652YPN_3651YPN_3652
YPES360102 YPA_2952YPA_3828YPA_3830YPA_3829YPA_3830
YPES214092 YPO3450YPO4001YPO4003YPO4002YPO4003
YPES187410 Y0737Y3828Y3825Y3826Y3825
YENT393305 YE0490YE4081YE4083YE4082YE4083
XAUT78245 XAUT_4659XAUT_4658XAUT_4659XAUT_2760XAUT_4659
VEIS391735 VEIS_4120VEIS_4593VEIS_4592VEIS_4591VEIS_4120VEIS_4591
TTHE300852 TTHA1337TTHA1338TTHA1337TTHA1336TTHA1336
TTHE262724 TT_C0972TT_C0973TT_C0972TT_C0971TT_C0972TT_C0971
TTEN273068 TTE1914TTE0613TTE1915TTE1914TTE1915
TSP28240 TRQ2_1667TRQ2_1667TRQ2_1666TRQ2_1667TRQ2_1666
TROS309801 TRD_1861TRD_A0701TRD_1524TRD_A0699TRD_1861TRD_A0699
TPET390874 TPET_1601TPET_1601TPET_1600TPET_1601TPET_1600
TMAR243274 TM_1149TM_1149TM_1150TM_1149TM_1150
TLET416591 TLET_0854TLET_0200TLET_0201TLET_0202TLET_0854TLET_0071
STYP99287 STM3629STM0851STM0850STM0849STM3629STM3630
STRO369723 STROP_0217STROP_1671STROP_1670STROP_1669STROP_0217STROP_0216
STHE292459 STH2314STH2313STH2653STH2315STH2314STH2315
SSP644076 SCH4B_2930SCH4B_3405SCH4B_3732SCH4B_2895SCH4B_3406SCH4B_2895
SSP292414 TM1040_2715TM1040_2716TM1040_2685TM1040_2686TM1040_0037TM1040_2686
SSON300269 SSO_1638SSO_0814SSO_0813SSO_0812SSO_3847SSO_3846
SPRO399741 SPRO_2348SPRO_1553SPRO_1552SPRO_1551SPRO_0139SPRO_3431
SMEL266834 SMC01526SMA0106SMC03127SMB20476SMC00787SMC00786
SMED366394 SMED_0330SMED_5165SMED_2854SMED_3647SMED_0330SMED_0329
SLAC55218 SL1157_0096SL1157_1243SL1157_3372SL1157_1240SL1157_0096SL1157_0098
SHIGELLA DPPBS0825S0824S0823DPPBDPPA
SGLO343509 SG0061SG0061SG0060SG0061SG0060
SFLE373384 SFV_3544SFV_0814SFV_0813SFV_3544SFV_3543
SFLE198214 AAN45029.1AAN42416.1AAN42415.1AAN42414.1AAN45029.1AAN45030.1
SERY405948 SACE_0258SACE_1275SACE_1274SACE_0258SACE_0257
SENT454169 SEHA_C3949SEHA_C0981SEHA_C0980SEHA_C0979SEHA_C3949SEHA_C3950
SENT321314 SCH_3560SCH_0846SCH_0845SCH_0844SCH_3560SCH_3561
SENT295319 SPA3486SPA1904SPA1905SPA1906SPA3486SPA3487
SENT220341 STY4169STY0890STY0889STY0888STY4169STY4168
SENT209261 T3886T2038T2039T2040T3886T3885
SDYS300267 SDY_4566SDY_0755SDY_0756SDY_0757SDY_4566SDY_4567
SBOY300268 SBO_1571SBO_0722SBO_0721SBO_0720SBO_3542SBO_1768
SARE391037 SARE_1662SARE_1663SARE_1662SARE_1661SARE_0256SARE_0255
RXYL266117 RXYL_2423RXYL_2422RXYL_2423RXYL_2424RXYL_2423RXYL_2424
RSPH349102 RSPH17025_3964RSPH17025_0374RSPH17025_3964RSPH17025_3963RSPH17025_3964RSPH17025_3963
RSPH349101 RSPH17029_3970RSPH17029_2463RSPH17029_3970RSPH17029_3969RSPH17029_3970RSPH17029_3969
RSPH272943 RSP_3232RSP_0805RSP_3232RSP_3231RSP_3232RSP_3231
RSOL267608 RSC1381RSC1382RSC1381RSC1380RSC1381RSC1380
RRUB269796 RRU_A2357RRU_A2358RRU_A2357RRU_A2356RRU_A2357RRU_A2356
RPOM246200 SPO_1544SPO_1545SPO_1211SPO_2554SPO_1544SPO_2554
RPAL316058 RPB_4050RPB_0230RPB_1224RPB_0232RPB_1224
RPAL258594 RPA1472RPA1448RPA1216RPA1446RPA1216
RMET266264 RMET_1409RMET_1410RMET_1409RMET_1408RMET_4576RMET_1408
RLEG216596 RL0779RL4577RL0779PRL90185RL0779RL0778
RFER338969 RFER_1953RFER_3105RFER_3104RFER_3103RFER_1953RFER_1949
REUT381666 H16_A2099H16_A2098H16_A2099H16_A2100H16_B0720H16_A2100
REUT264198 REUT_A1925REUT_A1924REUT_A1925REUT_A1926REUT_A1926
RETL347834 RHE_CH03993RHE_PF00241RHE_PE00341RHE_PB00094RHE_CH00737RHE_CH00736
PSYR223283 PSPTO_4562PSPTO_3250PSPTO_2575PSPTO_4561PSPTO_4562PSPTO_4559
PSYR205918 PSYR_4239PSYR_2680PSYR_2679PSYR_4238PSYR_4239PSYR_4236
PSP296591 BPRO_2812BPRO_0137BPRO_0138BPRO_0139BPRO_2812BPRO_2816
PPUT76869 PPUTGB1_0924PPUTGB1_0923PPUTGB1_0924PPUTGB1_0925PPUTGB1_0924PPUTGB1_0928
PPUT351746 PPUT_0920PPUT_1881PPUT_0920PPUT_0924PPUT_0920PPUT_0924
PPUT160488 PP_0881PP_0880PP_4455PP_0885PP_0881PP_0885
PMUL272843 PM0237PM0238PM0237PM0236PM0237PM0236
PMEN399739 PMEN_0840PMEN_0839PMEN_0840PMEN_0841PMEN_0840PMEN_0845
PLUM243265 PLU0301PLU0302PLU0300PLU0301PLU0300
PFLU220664 PFL_4025PFL_0876PFL_4025PFL_6050PFL_0877PFL_0881
PFLU216595 PFLU0822PFLU2281PFLU0822PFLU1636PFLU0822PFLU0827
PFLU205922 PFL_0812PFL_0811PFL_0812PFL_0815PFL_0812PFL_0816
PENT384676 PSEEN1056PSEEN1055PSEEN1056PSEEN1060PSEEN1056PSEEN1060
PAER208964 PA4503PA4504PA4503PA4496PA4503PA4502
PAER208963 PA14_58440PA14_58450PA14_58350PA14_58440PA14_58420
OIHE221109 OB2450OB3067OB3068OB2451OB2450OB2451
OCAR504832 OCAR_7514OCAR_7525OCAR_7524OCAR_7515OCAR_7524
OANT439375 OANT_1583OANT_0628OANT_0627OANT_0626OANT_1583OANT_4405
MSUC221988 MS1367MS1366MS1367MS2053MS1367MS2053
MSP409 M446_1691M446_2849M446_2209M446_1690M446_1691M446_1690
MSP400668 MMWYL1_0113MMWYL1_0112MMWYL1_0113MMWYL1_0114MMWYL1_0113MMWYL1_0114
MSP266779 MESO_0066MESO_1504MESO_1505MESO_2408MESO_0066MESO_0067
MLOT266835 MLR6671MLR5515MLR5417MLR1186MLR5417MLR5416
MACE188937 MA4250MA0880MA4250MA4247MA4250MA3461
LSPH444177 BSPH_0319BSPH_0320BSPH_0319BSPH_4232BSPH_0319BSPH_0318
KRAD266940 KRAD_2997KRAD_3861KRAD_0146KRAD_0145KRAD_2997KRAD_2998
KPNE272620 GKPORF_B3251GKPORF_B5300GKPORF_B5299GKPORF_B5298GKPORF_B3251GKPORF_B3252
HPYL85963 JHP0284JHP0284JHP0283JHP0284JHP0283
HPYL357544 HPAG1_0301HPAG1_0302HPAG1_0300HPAG1_0301HPAG1_0300
HPY HP0299HP0300HP0299HP0298HP0299HP0298
HMUK485914 HMUK_0216HMUK_0539HMUK_1597HMUK_0216HMUK_0217
HINF71421 HI_1187HI_1186HI_1187HI_0853HI_1187HI_0853
HINF281310 NTHI1357NTHI1355NTHI1357NTHI1021NTHI1357NTHI1021
HDUC233412 HD_0312HD_0313HD_0312HD_0215HD_0312HD_0215
HCHE349521 HCH_00012HCH_00012HCH_00013HCH_00012HCH_00013
HAUR316274 HAUR_1606HAUR_1607HAUR_1605HAUR_1606HAUR_1605
HACI382638 HAC_0560HAC_0561HAC_0560HAC_0559HAC_0560HAC_0559
GTHE420246 GTNG_0479GTNG_0480GTNG_0479GTNG_0478GTNG_0479GTNG_0478
FNUC190304 FN0397FN0398FN0397FN0396FN0396
ESP42895 ENT638_1104ENT638_1326ENT638_1325ENT638_1324ENT638_0185ENT638_2107
EFER585054 EFER_3540EFER_0973EFER_0972EFER_0971EFER_3540EFER_3541
ECOO157 Z2224Z1056Z1055Z1054DPPBDPPA
ECOL83334 ECS2090ECS0911ECS0910ECS0909ECS4423ECS4424
ECOL585397 ECED1_4222ECED1_0796ECED1_0795ECED1_0794ECED1_4222ECED1_4223
ECOL585057 ECIAI39_1750ECIAI39_0809ECIAI39_0808ECIAI39_0807ECIAI39_4052ECIAI39_4053
ECOL585056 ECUMN_1740ECUMN_1020ECUMN_1019ECUMN_1018ECUMN_4053ECUMN_4055
ECOL585055 EC55989_1618EC55989_0877EC55989_0876EC55989_0875EC55989_3994EC55989_3996
ECOL585035 ECS88_3963ECS88_0849ECS88_0848ECS88_0847ECS88_3963ECS88_3964
ECOL585034 ECIAI1_1496ECIAI1_0871ECIAI1_0870ECIAI1_0869ECIAI1_3701ECIAI1_3703
ECOL481805 ECOLC_2171ECOLC_2812ECOLC_2813ECOLC_2814ECOLC_0172ECOLC_0171
ECOL469008 ECBD_2153ECBD_2791ECBD_2792ECBD_2793ECBD_0193ECBD_0192
ECOL439855 ECSMS35_1687ECSMS35_0857ECSMS35_0856ECSMS35_0855ECSMS35_3862ECSMS35_3863
ECOL413997 ECB_01444ECB_00799ECB_00798ECB_00797ECB_03394ECB_03395
ECOL409438 ECSE_1576ECSE_0890ECSE_0889ECSE_0888ECSE_3816ECSE_3817
ECOL405955 APECO1_2905APECO1_1261APECO1_1262APECO1_1263APECO1_2905APECO1_2904
ECOL364106 UTI89_C4081UTI89_C0835UTI89_C0834UTI89_C0833UTI89_C4081UTI89_C4082
ECOL362663 ECP_3644ECP_0846ECP_0845ECP_0844ECP_3644ECP_3646
ECOL331111 ECE24377A_1675ECE24377A_0903ECE24377A_0902ECE24377A_0901ECE24377A_4035ECE24377A_4037
ECOL316407 ECK1480:JW1481:B1486ECK0822:JW0816:B0832ECK0821:JW0815:B0831ECK0820:JW5111:B0830ECK3530:JW3512:B3543ECK3531:JW3513:B3544
ECOL199310 C4358C0917C0916C0915C4358C4361
ECAR218491 ECA4075ECA2832ECA2833ECA2834ECA4393ECA4394
DRED349161 DRED_0390DRED_2452DRED_2453DRED_2454DRED_2453DRED_2454
DRAD243230 DR_0959DR_0958DR_0959DR_1290DR_0959DR_1290
DHAF138119 DSY0503DSY0504DSY0503DSY0502DSY0503DSY0502
DGEO319795 DGEO_1190DGEO_1190DGEO_1189DGEO_1190DGEO_1189
DDES207559 DDE_1184DDE_1183DDE_3174DDE_1184DDE_1185
CVIO243365 CV_1098CV_1099CV_1098CV_3426CV_1098CV_1097
CSP501479 CSE45_2493CSE45_3762CSE45_4965CSE45_3619CSE45_4965CSE45_3619
CKOR374847 KCR_0930KCR_0931KCR_0930KCR_0930KCR_0929
CKLU431943 CKL_1312CKL_1313CKL_1312CKL_1311CKL_1312CKL_1311
CHYD246194 CHY_1129CHY_1130CHY_1128CHY_1129CHY_1128
CDES477974 DAUD_0386DAUD_0387DAUD_0386DAUD_1982DAUD_0386DAUD_1982
BVIE269482 BCEP1808_3129BCEP1808_4722BCEP1808_4721BCEP1808_4720BCEP1808_3129BCEP1808_3130
BTHU281309 BT9727_4233BT9727_4232BT9727_4233BT9727_4231BT9727_4233BT9727_4231
BTHA271848 BTH_I0221BTH_II1115BTH_II1114BTH_II1113BTH_I0221BTH_I0220
BSUI470137 BSUIS_A1640BSUIS_B0794BSUIS_A1640BSUIS_B1007BSUIS_A1640
BSUI204722 BR_1585BR_A0802BR_1585BR_A1012BR_1585
BSP376 BRADO6822BRADO2503BRADO2921BRADO1743BRADO1742BRADO1743
BSP36773 BCEP18194_A6391BCEP18194_B1865BCEP18194_B1866BCEP18194_B1867BCEP18194_A6391BCEP18194_B2067
BPUM315750 BPUM_0822BPUM_0823BPUM_0822BPUM_0821BPUM_0822BPUM_0821
BPSE320373 BURPS668_0244BURPS668_A1850BURPS668_A1851BURPS668_A1853BURPS668_0244BURPS668_0243
BPSE320372 BURPS1710B_A0462BURPS1710B_B0387BURPS1710B_B0388BURPS1710B_B0390BURPS1710B_A0462BURPS1710B_A0461
BPSE272560 BPSL0250BPSS1304BPSS1305BPSS1306BPSL0250BPSL0249
BPET94624 BPET1795BPET1796BPET1795BPET1794BPET2851BPET1794
BPER257313 BP2395BP2394BP2395BP2396BP2395BP2396
BPAR257311 BPP3260BPP3259BPP3260BPP3261BPP3260BPP3261
BOVI236 GBOORFA0827GBOORFA0392GBOORFA1047GBOORFA1046GBOORF1599
BMEL359391 BAB1_1599BAB2_0436BAB1_1599BAB2_0974BAB1_1599BAB1_1600
BMEL224914 BMEI0435BMEI0436BMEI0435BMEII0284BMEI0435BMEI0433
BMAL320389 BMA10247_3377BMA10247_A1356BMA10247_A1357BMA10247_A1359BMA10247_3377BMA10247_3378
BMAL320388 BMASAVP1_A2970BMASAVP1_0399BMASAVP1_0400BMASAVP1_0402BMASAVP1_A2970BMASAVP1_A2969
BMAL243160 BMA_3302BMA_A0977BMA_A0976BMA_A0975BMA_3302BMA_3301
BLIC279010 BL03047BL03048BL03047BL03046BL03047BL03046
BJAP224911 BLR1037BLL0991BLL4895BLL2868BLR3342
BHAL272558 BH3643BH0030BH0029BH3026BH3643BH3644
BCLA66692 ABC1241ABC0032ABC0565ABC0033ABC1241ABC1240
BCER288681 BCE33L4245BCE33L4244BCE33L4245BCE33L4243BCE33L4245BCE33L4243
BCEN331272 BCEN2424_3044BCEN2424_4165BCEN2424_4164BCEN2424_4163BCEN2424_3044BCEN2424_3045
BCEN331271 BCEN_2430BCEN_4201BCEN_4202BCEN_4203BCEN_2430BCEN_2431
BCAN483179 BCAN_A1620BCAN_B0816BCAN_A1620BCAN_B1032BCAN_A1620
BBRO257310 BB3711BB3710BB3711BB3712BB3711BB3712
BANT592021 BAA_4748BAA_4747BAA_4748BAA_4746BAA_4748BAA_4746
BANT568206 BAMEG_4767BAMEG_4766BAMEG_4767BAMEG_4765BAMEG_4767BAMEG_4765
BANT261594 GBAA4732GBAA4731GBAA4732GBAA4729GBAA4732GBAA4729
BANT260799 BAS4392BAS4391BAS4392BAS4390BAS4392BAS4390
BAMB398577 BAMMC406_2955BAMMC406_4054BAMMC406_4053BAMMC406_4052BAMMC406_2955BAMMC406_3923
BAMB339670 BAMB_3089BAMB_3573BAMB_3572BAMB_3571BAMB_3089BAMB_3416
BABO262698 BRUAB1_1572BRUAB2_0430BRUAB1_1572BRUAB2_0952BRUAB1_1572
APLE434271 APJL_0065APJL_0066APJL_0065APJL_0063APJL_0065APJL_0866
APLE416269 APL_0065APL_0066APL_0065APL_0063APL_0065APL_2010
AORE350688 CLOS_1348CLOS_1349CLOS_1348CLOS_1347CLOS_1348CLOS_1347
AMET293826 AMET_2908AMET_2907AMET_2908AMET_2909AMET_2908AMET_2909
ACAU438753 AZC_1512AZC_2993AZC_2994AZC_2995AZC_2994
ABAU360910 BAV1160BAV1161BAV1160BAV1159BAV1645BAV1159
AAVE397945 AAVE_1659AAVE_1660AAVE_1659AAVE_1658AAVE_1659AAVE_1658


Organism features enriched in list (features available for 159 out of the 170 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.004856441112
Disease:Anthrax 0.005381244
Disease:Brucellosis 0.001440655
Disease:Dysentery 0.000383866
Endospores:No 5.575e-1027211
GC_Content_Range4:0-40 3.859e-1421213
GC_Content_Range4:40-60 0.005827473224
GC_Content_Range4:60-100 6.137e-865145
GC_Content_Range7:0-30 2.973e-6147
GC_Content_Range7:30-40 2.884e-820166
GC_Content_Range7:50-60 0.000017747107
GC_Content_Range7:60-70 3.197e-862134
Genome_Size_Range5:0-2 1.054e-1310155
Genome_Size_Range5:2-4 2.181e-631197
Genome_Size_Range5:4-6 1.033e-1388184
Genome_Size_Range5:6-10 3.765e-83047
Genome_Size_Range9:1-2 9.704e-1010128
Genome_Size_Range9:2-3 2.299e-712120
Genome_Size_Range9:4-5 0.00002484396
Genome_Size_Range9:5-6 1.317e-74588
Genome_Size_Range9:6-8 6.099e-92738
Gram_Stain:Gram_Neg 3.792e-8119333
Gram_Stain:Gram_Pos 0.000450626150
Habitat:Aquatic 0.00029381291
Habitat:Multiple 0.002153462178
Motility:No 2.273e-915151
Motility:Yes 2.665e-8102267
Oxygen_Req:Anaerobic 0.000511715102
Oxygen_Req:Facultative 0.000307072201
Pathogenic_in:Animal 0.00199252866
Shape:Coccus 1.243e-6682
Shape:Rod 4.815e-11128347



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 374
Effective number of orgs (counting one per cluster within 468 clusters): 297

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VFIS312309 ncbi Vibrio fischeri ES1141
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79011
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)1
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.1
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf41
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER226900 ncbi Bacillus cereus ATCC 145790
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS421
ASP1667 Arthrobacter sp.0
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4491
APHA212042 ncbi Anaplasma phagocytophilum HZ0
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis1
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6780   G6432   G6431   G6430   EG12625   EG10248   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121
WPIP955
WPIP80849
VFIS312309 VFA0309
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TTUR377629 TERTU_2103
TSP1755 TETH514_0621
TPSE340099 TETH39_1687
TPEN368408
TPAL243276
TKOD69014
TFUS269800 TFU_1822
TELO197221 TLR1197
TDEN326298
TDEN292415
TDEN243275
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP94122 SHEWANA3_2650
SSP84588
SSP64471
SSP387093 SUN_0891
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSAP342451 SSP1794
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SONE211586 SO_1805
SMUT210007
SMAR399550
SHAL458817 SHAL_2758
SHAE279808 SH1970
SGOR29390
SFUM335543
SEPI176280 SE_0680
SEPI176279 SERP0570
SELO269084
SDEN318161 SDEN_2482
SDEG203122
SCO SCO7564
SBAL402882 SHEW185_1604
SBAL399599 SBAL195_1638
SAVE227882
SAUR93062
SAUR93061 SAOUHSC_00923
SAUR426430 NWMN_0856
SAUR367830 SAUSA300_0887
SAUR282459 SAS0856
SAUR282458 SAR0949
SAUR273036 SAB0852
SAUR196620 MW0868
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780 SYN_01342
SACI330779
RTYP257363
RSP357808 ROSERS_1094
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPAL316055
RMAS416276
RFEL315456
RDEN375451
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PSTU379731
PSP312153
PSP117
PRUM264731
PPEN278197
PMAR93060
PMAR74547
PMAR74546
PMAR59920 PMN2A_0705
PMAR167555 NATL1_15391
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225 PLUT_1343
PISL384616
PINT246198
PGIN242619
PFUR186497 PF1409
PDIS435591
PCAR338963
PAST100379
PARS340102 PARS_1494
PARC259536
PAER178306
PACN267747 PPA2064
OTSU357244
NWIN323098
NSP387092
NSP35761 NOCA_4093
NSP103690 ALR0141
NSEN222891
NPHA348780
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MABS561007 MAB_0427
LXYL281090
LWEL386043 LWE0118
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669 LMOF2365_0154
LMON169963 LMO0136
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253 LI0250
LINT267671
LINT189518
LINN272626 LIN0183
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344 LVIS_1768
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
IHOS453591
HSOM228400 HSM_0943
HSOM205914 HS_0594
HNEP81032
HMOD498761
HHEP235279
HHAL349124
HBUT415426
HARS204773
GVIO251221
GURA351605 GURA_2052
GSUL243231 GSU_1435
GOXY290633
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_2510
FSP106370
FRANT
FPHI484022
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882 DVU_2462
DSHI398580 DSHI_3794
DPSY177439
DOLE96561
DNOD246195
DETH243164
DARO159087
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439 CT_1364
CSUL444179
CSP78
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415 NT01CX_1742
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHUT269798
CHOM360107
CGLU196627 CG2549
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CCUR360105
CCON360104
CCHL340177 CAG_1157
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CACE272562 CAC3644
CABO218497
BTUR314724
BTHU412694 BALH_0816
BTHE226186
BSP107806
BLON206672
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BCER572264 BCA_0955
BCER405917 BCE_1000
BCER315749
BCER226900
BBUR224326
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AVAR240292 AVA_1510
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721 AJS_0890
ASP1667
ASAL382245 ASA_2427
APHA212042
ANAE240017
AMAR329726 AM1_4650
AMAR234826
ALAI441768
AHYD196024 AHA_1876
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABOR393595
AAUR290340
AAEO224324


Organism features enriched in list (features available for 347 out of the 374 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000337351112
Disease:Gastroenteritis 0.0066619313
Disease:Wide_range_of_infections 0.00311131111
Endospores:No 6.222e-6150211
Endospores:Yes 0.00108742153
GC_Content_Range4:0-40 2.645e-14169213
GC_Content_Range4:40-60 0.0001435113224
GC_Content_Range4:60-100 6.885e-664145
GC_Content_Range7:0-30 0.00076533847
GC_Content_Range7:30-40 4.039e-10131166
GC_Content_Range7:50-60 0.000562549107
GC_Content_Range7:60-70 1.140e-656134
Genome_Size_Range5:0-2 7.462e-18135155
Genome_Size_Range5:2-4 0.0000344139197
Genome_Size_Range5:4-6 5.765e-1862184
Genome_Size_Range5:6-10 1.441e-71147
Genome_Size_Range9:0-1 5.376e-72727
Genome_Size_Range9:1-2 9.060e-12108128
Genome_Size_Range9:2-3 2.050e-693120
Genome_Size_Range9:4-5 3.639e-73596
Genome_Size_Range9:5-6 2.185e-92788
Genome_Size_Range9:6-8 1.205e-8638
Gram_Stain:Gram_Neg 0.0003138179333
Gram_Stain:Gram_Pos 0.0058977101150
Habitat:Host-associated 0.0001903142206
Habitat:Multiple 0.004467993178
Motility:No 1.607e-8118151
Motility:Yes 6.807e-11121267
Oxygen_Req:Facultative 0.0024729105201
Salinity:Mesophilic 0.0066619313
Shape:Coccus 2.799e-66782
Shape:Rod 3.644e-11169347
Shape:Sphere 0.00372091719
Shape:Spiral 0.00237072834



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 5
Effective number of orgs (counting one per cluster within 468 clusters): 5

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
HACI382638 ncbi Helicobacter acinonychis Sheeba 0.00062975076
HPY ncbi Helicobacter pylori 26695 0.00074215216
MACE188937 ncbi Methanosarcina acetivorans C2A 0.00289396536
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF8 0.00526483545
TLET416591 ncbi Thermotoga lettingae TMO 0.00975267996


Names of the homologs of the genes in the group in each of these orgs
  G6780   G6432   G6431   G6430   EG12625   EG10248   
HACI382638 HAC_0560HAC_0561HAC_0560HAC_0559HAC_0560HAC_0559
HPY HP0299HP0300HP0299HP0298HP0299HP0298
MACE188937 MA4250MA0880MA4250MA4247MA4250MA3461
CKOR374847 KCR_0930KCR_0931KCR_0930KCR_0930KCR_0929
TLET416591 TLET_0854TLET_0200TLET_0201TLET_0202TLET_0854TLET_0071


Organism features enriched in list (features available for 5 out of the 5 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Gastric_lesions 0.008576311



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTCAT-PWY (D-galactonate degradation)104800.4988
PWY-6196 (serine racemization)102760.4691
GALACTITOLCAT-PWY (galactitol degradation)73610.4603
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149940.4506
GLUCARDEG-PWY (D-glucarate degradation I)152950.4491
GALACTARDEG-PWY (D-galactarate degradation I)151940.4440
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951080.4258
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135840.4125
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112740.4076
PWY0-823 (arginine degradation III (arginine decarboxylase/agmatinase pathway))2451220.4068
XYLCAT-PWY (xylose degradation I)2171130.4068
PWY-1501 (mandelate degradation I)73560.4042
4-HYDROXYMANDELATE-DEGRADATION-PWY (4-hydroxymandelate degradation)102690.4009



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6432   G6431   G6430   EG12625   EG10248   
G67800.9995520.9995690.9994870.9998240.999723
G64320.9997340.9996070.9995150.999324
G64310.9996780.9996070.999413
G64300.9994550.99968
EG126250.999795
EG10248



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PAIRWISE BLAST SCORES:

  G6780   G6432   G6431   G6430   EG12625   EG10248   
G67800.0f0-7.4e-48-3.8e-51-
G6432-0.0f0----
G64311.4e-54-0.0f0-2.2e-58-
G6430---0.0f0-3.6e-52
EG126251.5e-70-9.3e-70-0.0f0-
EG10248---8.4e-51-0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-8-CPLX (dipeptide ABC transporter) (degree of match pw to cand: 0.400, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9993 EG10248 (dppA) DPPA-MONOMER (DppA)
             0.9996 0.9992 EG12626 (dppC) DPPC-MONOMER (DppC)
   *in cand* 0.9997 0.9995 EG12625 (dppB) DPPB-MONOMER (DppB)
             0.9990 0.9984 EG12628 (dppF) DPPF-MONOMER (DppF)
             0.9991 0.9986 EG12627 (dppD) DPPD-MONOMER (DppD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9995 G6430 (gsiB) YLIB-MONOMER (GsiB)
   *in cand* 0.9997 0.9994 G6431 (gsiC) YLIC-MONOMER (GsiC)
   *in cand* 0.9996 0.9993 G6432 (gsiD) YLID-MONOMER (GsiD)
   *in cand* 0.9997 0.9995 G6780 (ddpB) YDDR-MONOMER (YddR)

- ABC-49-CPLX (gsiABCD glutathione ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9994 G6431 (gsiC) YLIC-MONOMER (GsiC)
   *in cand* 0.9996 0.9993 G6432 (gsiD) YLID-MONOMER (GsiD)
   *in cand* 0.9997 0.9995 G6430 (gsiB) YLIB-MONOMER (GsiB)
             0.9944 0.9867 G6429 (gsiA) YLIA-MONOMER (GsiA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10248 (dppA) DPPA-MONOMER (DppA)
   *in cand* 0.9997 0.9995 EG12625 (dppB) DPPB-MONOMER (DppB)
   *in cand* 0.9997 0.9995 G6780 (ddpB) YDDR-MONOMER (YddR)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6430 G6431 G6432 (centered at G6431)
G6780 (centered at G6780)
EG10248 EG12625 (centered at EG10248)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6780   G6432   G6431   G6430   EG12625   EG10248   
219/623219/623214/623197/623206/623204/623
AAVE397945:0:Tyes121010
ABAC204669:0:Tyes215302153-2153-
ABAU360910:0:Tyes12104860
ACAU438753:0:Tyes01500150115021501-
AFUL224325:0:Tyes0---0-
AHYD196024:0:Tyes-----0
AMAR329726:9:Tyes0-----
AMET293826:0:Tyes101212
AORE350688:0:Tyes121010
APER272557:0:Tyes0-2056-20562055
APLE416269:0:Tyes232021988
APLE434271:0:Tno23202770
ASAL382245:5:Tyes-----0
ASP232721:2:Tyes-0----
AVAR240292:3:Tyes0-----
BABO262698:0:Tno-0-484--
BABO262698:1:Tno0-0-0-
BAMB339670:2:Tno-157156155-0
BAMB339670:3:Tno0---0-
BAMB398577:2:Tno-130129128-0
BAMB398577:3:Tno0---0-
BAMY326423:0:Tyes--0-0-
BANT260799:0:Tno212020
BANT261594:2:Tno212020
BANT568206:2:Tyes212020
BANT592021:2:Tno212020
BBAC360095:0:Tyes10----
BBRO257310:0:Tyes101212
BCAN483179:0:Tno-0-201--
BCAN483179:1:Tno0-0-0-
BCEN331271:1:Tno-012--
BCEN331271:2:Tno0---01
BCEN331272:2:Tyes-210--
BCEN331272:3:Tyes0---01
BCER288681:0:Tno212020
BCER405917:1:Tyes---0--
BCER572264:1:Tno---0--
BCLA66692:0:Tyes12470558112471246
BHAL272558:0:Tyes370810308837083709
BHEN283166:0:Tyes10----
BJAP224911:0:Fyes460392618922366-
BLIC279010:0:Tyes121010
BMAL243160:0:Tno-210--
BMAL243160:1:Tno1---10
BMAL320388:0:Tno-013--
BMAL320388:1:Tno1---10
BMAL320389:0:Tyes-013--
BMAL320389:1:Tyes0---01
BMEL224914:0:Tno---0--
BMEL224914:1:Tno232-20
BMEL359391:0:Tno-0-486--
BMEL359391:1:Tno0-0-01
BOVI236:0:Tyes-3420517516-
BOVI236:1:Tyes-----0
BPAR257311:0:Tno101212
BPER257313:0:Tyes101212
BPET94624:0:Tyes121010630
BPSE272560:0:Tyes-012--
BPSE272560:1:Tyes1---10
BPSE320372:0:Tno-013--
BPSE320372:1:Tno1---10
BPSE320373:0:Tno-013--
BPSE320373:1:Tno1---10
BPUM315750:0:Tyes121010
BQUI283165:0:Tyes10--1-
BSP36773:1:Tyes-012-202
BSP36773:2:Tyes0---0-
BSP376:0:Tyes48267081112101
BSUB:0:Tyes--0-0-
BSUI204722:0:Tyes-0-200--
BSUI204722:1:Tyes0-0-0-
BSUI470137:0:Tno-0-201--
BSUI470137:1:Tno0-0-0-
BTHA271848:0:Tno-210--
BTHA271848:1:Tno1---10
BTHU281309:1:Tno212020
BTHU412694:1:Tno---0--
BTRI382640:1:Tyes10----
BVIE269482:6:Tyes-210--
BVIE269482:7:Tyes0---01
BWEI315730:4:Tyes1--0--
BXEN266265:0:Tyes10--1-
BXEN266265:1:Tyes---0--
CACE272562:1:Tyes--0---
CBEI290402:0:Tyes--948-01
CBOT36826:1:Tno01903----
CBOT441770:0:Tyes01888----
CBOT441771:0:Tno01747----
CBOT441772:1:Tno01853----
CBOT498213:1:Tno01932----
CBOT508765:1:Tyes-01---
CBOT515621:2:Tyes02109----
CBOT536232:0:Tno02108----
CCHL340177:0:Tyes-0----
CDES477974:0:Tyes010156901569
CGLU196627:0:Tyes---0--
CHYD246194:0:Tyes12-010
CKLU431943:1:Tyes121010
CKOR374847:0:Tyes121-10
CNOV386415:0:Tyes-0----
CPSY167879:0:Tyes--1010
CSAL290398:0:Tyes--01-1
CSP501479:4:Fyes--0-0-
CSP501479:7:Fyes-142-0-0
CSP501479:8:Fyes0-----
CTEP194439:0:Tyes-0----
CVIO243365:0:Tyes121238810
DDES207559:0:Tyes10-202812
DGEO319795:1:Tyes1-1010
DHAF138119:0:Tyes121010
DRAD243230:3:Tyes1013271327
DRED349161:0:Tyes020652066206720662067
DSHI398580:3:Tyes-0----
DSP216389:0:Tyes-01---
DSP255470:0:Tno-01---
DVUL882:1:Tyes-0----
ECAR218491:0:Tyes128201216091610
ECOL199310:0:Tno337521033753378
ECOL316407:0:Tno67021029062905
ECOL331111:6:Tno74521030173019
ECOL362663:0:Tno279821027982800
ECOL364106:1:Tno323721032373238
ECOL405955:2:Tyes286921028692870
ECOL409438:6:Tyes69321029752976
ECOL413997:0:Tno64221026072608
ECOL439855:4:Tno81021029202922
ECOL469008:0:Tno196325902591259210
ECOL481805:0:Tno200526452646264710
ECOL585034:0:Tno62021027902792
ECOL585035:0:Tno300021030003001
ECOL585055:0:Tno74521030783080
ECOL585056:2:Tno72321030313033
ECOL585057:0:Tno95421032463247
ECOL585397:0:Tno332821033283329
ECOL83334:0:Tno119821035913592
ECOLI:0:Tno68021027722773
ECOO157:0:Tno109221036163617
EFER585054:1:Tyes255721025572558
ESP42895:1:Tyes93011641163116201945
FNUC190304:0:Tyes1210-0
FSP1855:0:Tyes---0--
GBET391165:0:Tyes--01--
GKAU235909:1:Tyes-0367---
GMET269799:1:Tyes-2---0
GSUL243231:0:Tyes-0----
GTHE420246:1:Tyes121010
GURA351605:0:Tyes-0----
HACI382638:1:Tyes121010
HAUR316274:2:Tyes12-010
HCHE349521:0:Tyes0-0101
HDUC233412:0:Tyes9192910910
HINF281310:0:Tyes28728628702870
HINF374930:0:Tyes-0-297-297
HINF71421:0:Tno32432332403240
HMAR272569:8:Tyes1650--165164
HMUK485914:1:Tyes03241382-01
HPY:0:Tno121010
HPYL357544:1:Tyes12-010
HPYL85963:0:Tno1-1010
HSAL478009:4:Tyes1---10
HSOM205914:1:Tyes-----0
HSOM228400:0:Tno-----0
HSP64091:2:Tno1---10
HWAL362976:1:Tyes952-0-952953
ILOI283942:0:Tyes---0-0
JSP290400:1:Tyes102119-2119-
KPNE272620:2:Tyes019841983198201
KRAD266940:2:Fyes16958070116951694
LBRE387344:2:Tyes--0---
LINN272626:1:Tno--0---
LINT363253:3:Tyes-0----
LMON169963:0:Tno--0---
LMON265669:0:Tyes--0---
LSPH444177:1:Tyes121379510
LWEL386043:0:Tyes--0---
MABS561007:1:Tyes--0---
MACE188937:0:Tyes327403274327132742509
MBAR269797:1:Tyes02328734682--
MFLA265072:0:Tyes0-0-0-
MGIL350054:3:Tyes-01-1-
MHUN323259:0:Tyes-5-0-0
MLAB410358:0:Tyes-01-15
MLOT266835:2:Tyes433133623281032813280
MMAZ192952:0:Tyes-7580-759-
MSME246196:0:Tyes-3248324701-
MSP164756:1:Tno010-0-
MSP164757:0:Tno010-0-
MSP189918:2:Tyes010-0-
MSP266779:3:Tyes014521453235901
MSP400668:0:Tyes101212
MSP409:2:Tyes11102488010
MSUC221988:0:Tyes1017071707
MVAN350058:0:Tyes010-0-
NOCE323261:1:Tyes0-0-0-
NSP103690:6:Tyes0-----
NSP35761:1:Tyes--0---
OANT439375:4:Tyes-----0
OANT439375:5:Tyes977210977-
OCAR504832:0:Tyes01110110-
OIHE221109:0:Tyes0618619101
PABY272844:0:Tyes010---
PACN267747:0:Tyes0-----
PAER208963:0:Tyes78-076
PAER208964:0:Tno787076
PARS340102:0:Tyes-----0
PATL342610:0:Tyes---0-0
PCRY335284:1:Tyes0---01
PENT384676:0:Tyes101515
PFLU205922:0:Tyes101415
PFLU216595:1:Tyes01403079105
PFLU220664:0:Tyes310903109508815
PFUR186497:0:Tyes0-----
PHAL326442:1:Tyes----10
PHOR70601:0:Tyes629----0
PING357804:0:Tyes218----0
PLUM243265:0:Fyes12-010
PLUT319225:0:Tyes-0----
PMAR167555:0:Tyes0-----
PMAR59920:0:Tno0-----
PMEN399739:0:Tyes101216
PMOB403833:0:Tyes0---0-
PMUL272843:1:Tyes121010
PNAP365044:8:Tyes2990--299-
PPRO298386:2:Tyes---0-0
PPUT160488:0:Tno103565515
PPUT351746:0:Tyes09670404
PPUT76869:0:Tno101215
PSP296591:2:Tyes266101226612665
PSP56811:2:Tyes1--010
PSYR205918:0:Tyes157110157015711568
PSYR223283:2:Tyes19566570195519561953
PTHE370438:0:Tyes---0-0
RCAS383372:0:Tyes-06-1-
RETL347834:0:Tyes---0--
RETL347834:3:Tyes--0---
RETL347834:4:Tyes-0----
RETL347834:5:Tyes3224---10
REUT264198:3:Tyes1012-2
REUT381666:1:Tyes----0-
REUT381666:2:Tyes1012-2
RFER338969:1:Tyes411561155115440
RLEG216596:2:Tyes---0--
RLEG216596:6:Tyes137951-10
RMET266264:1:Tyes----0-
RMET266264:2:Tyes1210-0
RPAL258594:0:Tyes25523202300-
RPAL316056:0:Tyes--0-0-
RPAL316057:0:Tyes0-0-0-
RPAL316058:0:Tyes38490100921009-
RPOM246200:1:Tyes327328013123271312
RRUB269796:1:Tyes121010
RSOL267608:1:Tyes121010
RSP357808:0:Tyes--0---
RSPH272943:3:Tyes1-1010
RSPH272943:4:Tyes-0----
RSPH349101:1:Tno1-1010
RSPH349101:2:Tno-0----
RSPH349102:4:Tyes1-1010
RSPH349102:5:Tyes-0----
RXYL266117:0:Tyes101212
SACI56780:0:Tyes-0----
SARE391037:0:Tyes138213831382138110
SAUR158878:1:Tno-0797---
SAUR158879:1:Tno-0685---
SAUR196620:0:Tno--0---
SAUR273036:0:Tno--0---
SAUR282458:0:Tno--0---
SAUR282459:0:Tno--0---
SAUR359786:1:Tno-0808---
SAUR359787:1:Tno-0800---
SAUR367830:3:Tno--0---
SAUR418127:0:Tyes-0794---
SAUR426430:0:Tno--0---
SAUR93061:0:Fno--0---
SBAL399599:3:Tyes-----0
SBAL402882:1:Tno-----0
SBOY300268:1:Tyes7992102675986
SCO:2:Fyes--0---
SDEN318161:0:Tyes-----0
SDYS300267:1:Tyes355501235553556
SENT209261:0:Tno176801217681767
SENT220341:0:Tno297921029792978
SENT295319:0:Tno153001215301531
SENT321314:2:Tno275421027542755
SENT454169:2:Tno286621028662867
SEPI176279:1:Tyes--0---
SEPI176280:0:Tno--0---
SERY405948:0:Tyes1-1003100210
SFLE198214:0:Tyes267521026752676
SFLE373384:0:Tno2589-1025892588
SGLO343509:3:Tyes1-1010
SHAE279808:0:Tyes--0---
SHAL458817:0:Tyes-----0
SHIGELLA:0:Tno296021029602959
SLAC55218:1:Fyes011213213111802
SLOI323850:0:Tyes----10
SMED366394:1:Tyes-0----
SMED366394:2:Tyes---0--
SMED366394:3:Tyes1-2497-10
SMEL266834:0:Tyes-0----
SMEL266834:1:Tyes---0--
SMEL266834:2:Tyes1709-2272-10
SONE211586:1:Tyes-----0
SPEA398579:0:Tno----10
SPRO399741:1:Tyes226114591458145703358
SSAP342451:2:Tyes--0---
SSED425104:0:Tyes----01
SSON300269:1:Tyes78421028832882
SSP292414:2:Tyes272027212690269102691
SSP387093:0:Tyes---0--
SSP644076:3:Fyes--0---
SSP644076:6:Fyes34502-05030
SSP94122:1:Tyes-----0
STHE292459:0:Tyes10350212
STRO369723:0:Tyes114541453145210
STYP99287:1:Tyes276021027602761
TCRU317025:0:Tyes0-0-0-
TELO197221:0:Tyes0-----
TERY203124:0:Tyes0--486--
TFUS269800:0:Tyes-0----
TLET416591:0:Tyes7971291301317970
TMAR243274:0:Tyes0-0101
TPET390874:0:Tno1-1010
TPSE340099:0:Tyes-0----
TROS309801:0:Tyes-2-0-0
TROS309801:1:Tyes333-0-333-
TSP1755:0:Tyes-0----
TSP28240:0:Tyes1-1010
TTEN273068:0:Tyes12420-124312421243
TTHE262724:1:Tyes121010
TTHE300852:2:Tyes1210-0
TTUR377629:0:Tyes--0---
UMET351160:0:Tyes10--1-
VCHO:0:Tyes-0-584-584
VCHO345073:1:Tno-0-668-668
VEIS391735:1:Tyes04714704690469
VFIS312309:1:Tyes-----0
VPAR223926:1:Tyes---0-0
VVUL196600:2:Tyes---0-0
VVUL216895:1:Tno---0-0
XAUT78245:1:Tyes19101909191001910-
YENT393305:1:Tyes03489-349134903491
YPES187410:5:Tno03112-310931103109
YPES214092:3:Tno0559-561560561
YPES349746:2:Tno017-16-16
YPES360102:3:Tyes0891-893892893
YPES377628:2:Tno10-212
YPES386656:2:Tno0--101
YPSE273123:2:Tno10-212
YPSE349747:2:Tno10-212



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