Org ID | Org Name | # genes in group found in org |
ZMOB264203 ncbi | Zymomonas mobilis mobilis ZM4 | 5 |
YPSE349747 ncbi | Yersinia pseudotuberculosis IP 31758 | 6 |
YPSE273123 ncbi | Yersinia pseudotuberculosis IP 32953 | 6 |
YPES386656 ncbi | Yersinia pestis Pestoides F | 6 |
YPES377628 ncbi | Yersinia pestis Nepal516 | 6 |
YPES360102 ncbi | Yersinia pestis Antiqua | 6 |
YPES349746 ncbi | Yersinia pestis Angola | 6 |
YPES214092 ncbi | Yersinia pestis CO92 | 6 |
YPES187410 ncbi | Yersinia pestis KIM 10 | 6 |
YENT393305 ncbi | Yersinia enterocolitica enterocolitica 8081 | 6 |
XORY360094 ncbi | Xanthomonas oryzae pv. oryzae PXO99A | 5 |
XORY342109 ncbi | Xanthomonas oryzae pv. oryzae MAFF 311018 | 5 |
XORY291331 ncbi | Xanthomonas oryzae pv. oryzae KACC10331 | 5 |
XFAS405440 ncbi | Xylella fastidiosa M12 | 5 |
XFAS183190 ncbi | Xylella fastidiosa Temecula1 | 5 |
XFAS160492 ncbi | Xylella fastidiosa 9a5c | 5 |
XCAM487884 | Xanthomonas campestris pv. paulliniae | 5 |
XCAM316273 ncbi | Xanthomonas campestris pv. vesicatoria str. 85-10 | 5 |
XCAM314565 ncbi | Xanthomonas campestris pv. campestris str. 8004 | 5 |
XCAM190485 ncbi | Xanthomonas campestris pv. campestris str. ATCC 33913 | 5 |
XAXO190486 ncbi | Xanthomonas axonopodis pv. citri str. 306 | 5 |
XAUT78245 ncbi | Xanthobacter autotrophicus Py2 | 5 |
VVUL216895 ncbi | Vibrio vulnificus CMCP6 | 6 |
VVUL196600 ncbi | Vibrio vulnificus YJ016 | 6 |
VPAR223926 ncbi | Vibrio parahaemolyticus RIMD 2210633 | 6 |
VFIS312309 ncbi | Vibrio fischeri ES114 | 6 |
VEIS391735 ncbi | Verminephrobacter eiseniae EF01-2 | 5 |
VCHO345073 ncbi | Vibrio cholerae O395 | 6 |
VCHO ncbi | Vibrio cholerae O1 biovar El Tor str. N16961 | 6 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 5 |
TTEN273068 ncbi | Thermoanaerobacter tengcongensis MB4 | 5 |
TSP1755 | Thermoanaerobacter sp. | 5 |
TDEN292415 ncbi | Thiobacillus denitrificans ATCC 25259 | 6 |
TCRU317025 ncbi | Thiomicrospira crunogena XCL-2 | 6 |
SWOL335541 ncbi | Syntrophomonas wolfei wolfei Goettingen | 5 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 6 |
STHE292459 ncbi | Symbiobacterium thermophilum IAM 14863 | 5 |
SSP94122 ncbi | Shewanella sp. ANA-3 | 6 |
SSP292414 ncbi | Ruegeria sp. TM1040 | 5 |
SSON300269 ncbi | Shigella sonnei Ss046 | 6 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 6 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 6 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 6 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 6 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 6 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 6 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 6 |
SGLO343509 ncbi | Sodalis glossinidius morsitans | 6 |
SFUM335543 ncbi | Syntrophobacter fumaroxidans MPOB | 5 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 6 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 6 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 6 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 6 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 6 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 6 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 6 |
SDYS300267 ncbi | Shigella dysenteriae Sd197 | 6 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 6 |
SDEG203122 ncbi | Saccharophagus degradans 2-40 | 5 |
SBOY300268 ncbi | Shigella boydii Sb227 | 6 |
SBAL402882 ncbi | Shewanella baltica OS185 | 6 |
SBAL399599 ncbi | Shewanella baltica OS195 | 6 |
SACI56780 ncbi | Syntrophus aciditrophicus SB | 5 |
RSPH349102 ncbi | Rhodobacter sphaeroides ATCC 17025 | 5 |
RSPH349101 ncbi | Rhodobacter sphaeroides ATCC 17029 | 5 |
RSPH272943 ncbi | Rhodobacter sphaeroides 2.4.1 | 5 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 6 |
RPOM246200 ncbi | Ruegeria pomeroyi DSS-3 | 5 |
RPAL316058 ncbi | Rhodopseudomonas palustris HaA2 | 5 |
RPAL316057 ncbi | Rhodopseudomonas palustris BisB5 | 5 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 5 |
RPAL316055 ncbi | Rhodopseudomonas palustris BisA53 | 5 |
RPAL258594 ncbi | Rhodopseudomonas palustris CGA009 | 5 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 6 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 6 |
REUT381666 ncbi | Ralstonia eutropha H16 | 6 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 6 |
PTHE370438 ncbi | Pelotomaculum thermopropionicum SI | 5 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 5 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 5 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 5 |
PSP56811 | Psychrobacter sp. | 5 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 6 |
PSP296591 ncbi | Polaromonas sp. JS666 | 6 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 5 |
PPUT351746 ncbi | Pseudomonas putida F1 | 5 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 5 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 6 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 6 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 5 |
PLUM243265 ncbi | Photorhabdus luminescens laumondii TTO1 | 6 |
PING357804 ncbi | Psychromonas ingrahamii 37 | 5 |
PHAL326442 ncbi | Pseudoalteromonas haloplanktis TAC125 | 5 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 5 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 5 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 5 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 5 |
PCRY335284 ncbi | Psychrobacter cryohalolentis K5 | 5 |
PCAR338963 ncbi | Pelobacter carbinolicus DSM 2380 | 6 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 6 |
PARC259536 ncbi | Psychrobacter arcticus 273-4 | 5 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 5 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 5 |
OCAR504832 ncbi | Oligotropha carboxidovorans OM5 | 5 |
NWIN323098 ncbi | Nitrobacter winogradskyi Nb-255 | 5 |
NOCE323261 ncbi | Nitrosococcus oceani ATCC 19707 | 6 |
NMUL323848 ncbi | Nitrosospira multiformis ATCC 25196 | 6 |
NMEN374833 ncbi | Neisseria meningitidis 053442 | 6 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 6 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 6 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 6 |
NHAM323097 ncbi | Nitrobacter hamburgensis X14 | 5 |
NGON242231 ncbi | Neisseria gonorrhoeae FA 1090 | 6 |
NEUT335283 ncbi | Nitrosomonas eutropha C91 | 5 |
NEUR228410 ncbi | Nitrosomonas europaea ATCC 19718 | 5 |
MSP409 | Methylobacterium sp. | 5 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 6 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 6 |
MMAG342108 ncbi | Magnetospirillum magneticum AMB-1 | 5 |
MFLA265072 ncbi | Methylobacillus flagellatus KT | 6 |
MEXT419610 ncbi | Methylobacterium extorquens PA1 | 6 |
MCAP243233 ncbi | Methylococcus capsulatus Bath | 5 |
MAQU351348 ncbi | Marinobacter aquaeolei VT8 | 5 |
LSPH444177 ncbi | Lysinibacillus sphaericus C3-41 | 5 |
LPNE400673 ncbi | Legionella pneumophila Corby | 5 |
LPNE297246 ncbi | Legionella pneumophila Paris | 5 |
LPNE297245 ncbi | Legionella pneumophila Lens | 5 |
LPNE272624 ncbi | Legionella pneumophila pneumophila Philadelphia 1 | 5 |
LCHO395495 ncbi | Leptothrix cholodnii SP-6 | 6 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 6 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 6 |
JSP290400 ncbi | Jannaschia sp. CCS1 | 5 |
ILOI283942 ncbi | Idiomarina loihiensis L2TR | 6 |
HMOD498761 ncbi | Heliobacterium modesticaldum Ice1 | 5 |
HHAL349124 ncbi | Halorhodospira halophila SL1 | 6 |
HCHE349521 ncbi | Hahella chejuensis KCTC 2396 | 5 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 6 |
GURA351605 ncbi | Geobacter uraniireducens Rf4 | 5 |
GSUL243231 ncbi | Geobacter sulfurreducens PCA | 6 |
GMET269799 ncbi | Geobacter metallireducens GS-15 | 6 |
ESP42895 | Enterobacter sp. | 6 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 6 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 6 |
ECOL83334 | Escherichia coli O157:H7 | 6 |
ECOL585397 ncbi | Escherichia coli ED1a | 6 |
ECOL585057 ncbi | Escherichia coli IAI39 | 6 |
ECOL585056 ncbi | Escherichia coli UMN026 | 6 |
ECOL585055 ncbi | Escherichia coli 55989 | 6 |
ECOL585035 ncbi | Escherichia coli S88 | 6 |
ECOL585034 ncbi | Escherichia coli IAI1 | 6 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 6 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 6 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 6 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 6 |
ECOL409438 ncbi | Escherichia coli SE11 | 6 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 6 |
ECOL364106 ncbi | Escherichia coli UTI89 | 6 |
ECOL362663 ncbi | Escherichia coli 536 | 6 |
ECOL331111 ncbi | Escherichia coli E24377A | 6 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 6 |
ECOL199310 ncbi | Escherichia coli CFT073 | 6 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 6 |
DVUL882 ncbi | Desulfovibrio vulgaris Hildenborough | 5 |
DSHI398580 ncbi | Dinoroseobacter shibae DFL 12 | 5 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 5 |
DARO159087 ncbi | Dechloromonas aromatica RCB | 6 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 6 |
CVES412965 ncbi | Candidatus Vesicomyosocius okutanii HA | 5 |
CSP501479 | Citreicella sp. SE45 | 5 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 5 |
CRUT413404 ncbi | Candidatus Ruthia magnifica Cm (Calyptogena magnifica) | 5 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 5 |
CNOV386415 ncbi | Clostridium novyi NT | 5 |
CJAP155077 | Cellvibrio japonicus | 5 |
CBUR434922 ncbi | Coxiella burnetii Dugway 5J108-111 | 5 |
CBUR360115 ncbi | Coxiella burnetii RSA 331 | 5 |
CBUR227377 ncbi | Coxiella burnetii RSA 493 | 5 |
CBOT36826 | Clostridium botulinum A | 5 |
CAULO ncbi | Caulobacter crescentus CB15 | 5 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 6 |
BTRI382640 ncbi | Bartonella tribocorum CIP 105476 | 6 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 6 |
BSP376 | Bradyrhizobium sp. | 6 |
BSP36773 | Burkholderia sp. | 6 |
BQUI283165 ncbi | Bartonella quintana Toulouse | 5 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 5 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 6 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 6 |
BPET94624 | Bordetella petrii | 6 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 6 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 6 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 6 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 6 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 6 |
BJAP224911 ncbi | Bradyrhizobium japonicum USDA 110 | 5 |
BHEN283166 ncbi | Bartonella henselae Houston-1 | 5 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 5 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 6 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 6 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 6 |
BBAC360095 ncbi | Bartonella bacilliformis KC583 | 5 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 6 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 6 |
ASP76114 ncbi | Aromatoleum aromaticum EbN1 | 6 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 5 |
ASP62928 ncbi | Azoarcus sp. BH72 | 6 |
ASP232721 ncbi | Acidovorax sp. JS42 | 6 |
ASAL382245 ncbi | Aeromonas salmonicida salmonicida A449 | 5 |
AHYD196024 | Aeromonas hydrophila dhakensis | 5 |
AFER243159 ncbi | Acidithiobacillus ferrooxidans ATCC 23270 | 6 |
AEHR187272 ncbi | Alkalilimnicola ehrlichii MLHE-1 | 6 |
ADEH290397 ncbi | Anaeromyxobacter dehalogenans 2CP-C | 5 |
ACRY349163 ncbi | Acidiphilium cryptum JF-5 | 5 |
ACAU438753 ncbi | Azorhizobium caulinodans ORS 571 | 5 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 5 |
ABAU360910 ncbi | Bordetella avium 197N | 6 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 6 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 0.0000126 | 15 | 92 |
Disease:Bubonic_plague | 0.0016974 | 6 | 6 |
Disease:Dysentery | 0.0016974 | 6 | 6 |
Disease:Gastroenteritis | 0.0018805 | 10 | 13 |
Endospores:No | 3.333e-10 | 40 | 211 |
Endospores:Yes | 8.614e-6 | 5 | 53 |
GC_Content_Range4:0-40 | 2.412e-30 | 15 | 213 |
GC_Content_Range4:40-60 | 1.827e-8 | 109 | 224 |
GC_Content_Range4:60-100 | 1.011e-8 | 79 | 145 |
GC_Content_Range7:0-30 | 1.810e-8 | 1 | 47 |
GC_Content_Range7:30-40 | 1.099e-19 | 14 | 166 |
GC_Content_Range7:50-60 | 5.171e-11 | 67 | 107 |
GC_Content_Range7:60-70 | 1.444e-10 | 78 | 134 |
Genome_Size_Range5:0-2 | 3.690e-27 | 5 | 155 |
Genome_Size_Range5:2-4 | 0.0011510 | 53 | 197 |
Genome_Size_Range5:4-6 | 4.683e-26 | 121 | 184 |
Genome_Size_Range5:6-10 | 0.0071424 | 24 | 47 |
Genome_Size_Range9:0-1 | 0.0001061 | 1 | 27 |
Genome_Size_Range9:1-2 | 6.808e-22 | 4 | 128 |
Genome_Size_Range9:2-3 | 0.0004607 | 27 | 120 |
Genome_Size_Range9:4-5 | 5.125e-11 | 62 | 96 |
Genome_Size_Range9:5-6 | 1.634e-11 | 59 | 88 |
Genome_Size_Range9:6-8 | 0.0015024 | 22 | 38 |
Gram_Stain:Gram_Neg | 1.670e-35 | 183 | 333 |
Gram_Stain:Gram_Pos | 8.714e-29 | 3 | 150 |
Habitat:Host-associated | 0.0074198 | 60 | 206 |
Habitat:Multiple | 0.0002544 | 80 | 178 |
Habitat:Specialized | 0.0040125 | 10 | 53 |
Motility:No | 2.927e-13 | 18 | 151 |
Motility:Yes | 2.468e-17 | 141 | 267 |
Optimal_temp.:25-30 | 0.0000731 | 15 | 19 |
Optimal_temp.:37 | 0.0011399 | 24 | 106 |
Oxygen_Req:Anaerobic | 1.769e-6 | 16 | 102 |
Oxygen_Req:Facultative | 0.0000249 | 92 | 201 |
Pathogenic_in:Plant | 0.0020135 | 11 | 15 |
Shape:Coccus | 1.198e-7 | 9 | 82 |
Shape:Rod | 5.167e-18 | 168 | 347 |
Shape:Spiral | 0.0014446 | 4 | 34 |
Temp._range:Hyperthermophilic | 0.0005444 | 1 | 23 |
Temp._range:Mesophilic | 0.0062406 | 175 | 473 |
Temp._range:Psychrophilic | 0.0011729 | 8 | 9 |
Temp._range:Thermophilic | 0.0010398 | 4 | 35 |
Org ID | Org Name | # genes in group found in org |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
UMET351160 ncbi | uncultured methanogenic archaeon RC-I | 0 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 0 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 0 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 0 |
TTHE300852 ncbi | Thermus thermophilus HB8 | 1 |
TTHE262724 ncbi | Thermus thermophilus HB27 | 1 |
TPEN368408 ncbi | Thermofilum pendens Hrk 5 | 0 |
TLET416591 ncbi | Thermotoga lettingae TMO | 1 |
TKOD69014 ncbi | Thermococcus kodakarensis KOD1 | 0 |
TFUS269800 ncbi | Thermobifida fusca YX | 1 |
TDEN243275 ncbi | Treponema denticola ATCC 35405 | 1 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
SSP64471 ncbi | Synechococcus sp. CC9311 | 1 |
SSOL273057 ncbi | Sulfolobus solfataricus P2 | 0 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 0 |
SHAE279808 ncbi | Staphylococcus haemolyticus JCSC1435 | 1 |
SERY405948 ncbi | Saccharopolyspora erythraea NRRL 2338 | 1 |
SAUR93061 ncbi | Staphylococcus aureus aureus NCTC 8325 | 1 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RSP101510 ncbi | Rhodococcus jostii RHA1 | 1 |
RSAL288705 ncbi | Renibacterium salmoninarum ATCC 33209 | 0 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 0 |
PSP117 | Pirellula sp. | 1 |
PMAR74547 ncbi | Prochlorococcus marinus MIT 9313 | 1 |
PMAR59920 ncbi | Prochlorococcus marinus NATL2A | 1 |
PMAR167555 ncbi | Prochlorococcus marinus NATL1A | 1 |
PMAR167546 ncbi | Prochlorococcus marinus MIT 9301 | 1 |
PMAR167542 ncbi | Prochlorococcus marinus MIT 9515 | 1 |
PMAR167540 | Prochlorococcus marinus pastoris MED4ax | 1 |
PMAR167539 ncbi | Prochlorococcus marinus marinus CCMP1375 | 1 |
PMAR146891 ncbi | Prochlorococcus marinus AS9601 | 1 |
PISL384616 ncbi | Pyrobaculum islandicum DSM 4184 | 0 |
PINT246198 | Prevotella intermedia 17 | 1 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PFUR186497 ncbi | Pyrococcus furiosus DSM 3638 | 0 |
PAST100379 | Onion yellows phytoplasma | 1 |
PARS340102 ncbi | Pyrobaculum arsenaticum DSM 13514 | 0 |
PAER178306 ncbi | Pyrobaculum aerophilum IM2 | 0 |
PACN267747 ncbi | Propionibacterium acnes KPA171202 | 1 |
PABY272844 ncbi | Pyrococcus abyssi GE5 | 0 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
NFAR247156 ncbi | Nocardia farcinica IFM 10152 | 1 |
MVAN350058 ncbi | Mycobacterium vanbaalenii PYR-1 | 1 |
MTUB419947 ncbi | Mycobacterium tuberculosis H37Ra | 1 |
MTUB336982 ncbi | Mycobacterium tuberculosis F11 | 1 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 0 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 0 |
MTBRV ncbi | Mycobacterium tuberculosis H37Rv | 1 |
MTBCDC ncbi | Mycobacterium tuberculosis CDC1551 | 1 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 0 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 0 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 0 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 0 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 0 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 1 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 0 |
MMAZ192952 ncbi | Methanosarcina mazei Go1 | 0 |
MMAR444158 ncbi | Methanococcus maripaludis C6 | 0 |
MMAR426368 ncbi | Methanococcus maripaludis C7 | 0 |
MMAR402880 ncbi | Methanococcus maripaludis C5 | 0 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 0 |
MMAR267377 ncbi | Methanococcus maripaludis S2 | 0 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 0 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 0 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 0 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 0 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 0 |
MHUN323259 ncbi | Methanospirillum hungatei JF-1 | 0 |
MGIL350054 ncbi | Mycobacterium gilvum PYR-GCK | 1 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MFLO265311 ncbi | Mesoplasma florum L1 | 1 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 1 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 0 |
MBOV410289 ncbi | Mycobacterium bovis BCG str. Pasteur 1173P2 | 1 |
MBOV233413 ncbi | Mycobacterium bovis AF2122/97 | 1 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 0 |
MAVI243243 ncbi | Mycobacterium avium 104 | 1 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 1 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 0 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 0 |
LREU557436 ncbi | Lactobacillus reuteri DSM 20016 | 1 |
LMES203120 ncbi | Leuconostoc mesenteroides mesenteroides ATCC 8293 | 1 |
LBRE387344 ncbi | Lactobacillus brevis ATCC 367 | 1 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 0 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 0 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 0 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 0 |
HMAR272569 ncbi | Haloarcula marismortui ATCC 43049 | 0 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
FSP1855 | Frankia sp. EAN1pec | 1 |
DRAD243230 ncbi | Deinococcus radiodurans R1 | 1 |
DGEO319795 ncbi | Deinococcus geothermalis DSM 11300 | 0 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 1 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 1 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 1 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 1 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 1 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 1 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 1 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 0 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 0 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 1 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 1 |
CEFF196164 ncbi | Corynebacterium efficiens YS-314 | 1 |
CDIP257309 ncbi | Corynebacterium diphtheriae NCTC 13129 | 1 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 1 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 1 |
BXEN266265 ncbi | Burkholderia xenovorans LB400 | 0 |
BTUR314724 ncbi | Borrelia turicatae 91E135 | 1 |
BLON206672 ncbi | Bifidobacterium longum NCC2705 | 0 |
BLIC279010 ncbi | Bacillus licheniformis ATCC 14580 | 1 |
BHER314723 ncbi | Borrelia hermsii DAH | 0 |
BGAR290434 ncbi | Borrelia garinii PBi | 1 |
BBUR224326 ncbi | Borrelia burgdorferi B31 | 1 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 1 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
ASP1667 | Arthrobacter sp. | 0 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
ANAE240017 | Actinomyces oris MG1 | 1 |
AFUL224325 ncbi | Archaeoglobus fulgidus DSM 4304 | 0 |
ACEL351607 ncbi | Acidothermus cellulolyticus 11B | 1 |
AAUR290340 ncbi | Arthrobacter aurescens TC1 | 1 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 0.0001631 | 7 | 92 |
Arrangment:Pairs | 0.0052182 | 14 | 112 |
Arrangment:Singles | 0.0048488 | 71 | 286 |
Disease:Pharyngitis | 2.853e-6 | 8 | 8 |
Disease:Tuberculosis | 0.0087649 | 3 | 3 |
Disease:bronchitis_and_pneumonitis | 2.853e-6 | 8 | 8 |
Endospores:No | 1.608e-13 | 79 | 211 |
GC_Content_Range7:0-30 | 0.0007198 | 19 | 47 |
Genome_Size_Range5:0-2 | 7.414e-12 | 63 | 155 |
Genome_Size_Range5:4-6 | 1.096e-8 | 14 | 184 |
Genome_Size_Range9:0-1 | 1.281e-9 | 20 | 27 |
Genome_Size_Range9:1-2 | 0.0000466 | 43 | 128 |
Genome_Size_Range9:4-5 | 0.0019890 | 10 | 96 |
Genome_Size_Range9:5-6 | 4.363e-6 | 4 | 88 |
Genome_Size_Range9:6-8 | 0.0058603 | 2 | 38 |
Gram_Stain:Gram_Neg | 1.344e-14 | 32 | 333 |
Habitat:Aquatic | 0.0005203 | 31 | 91 |
Habitat:Multiple | 2.161e-9 | 12 | 178 |
Habitat:Specialized | 0.0001732 | 22 | 53 |
Motility:No | 0.0000316 | 49 | 151 |
Motility:Yes | 0.0005284 | 40 | 267 |
Optimal_temp.:- | 0.0000102 | 33 | 257 |
Optimal_temp.:100 | 0.0087649 | 3 | 3 |
Optimal_temp.:35-40 | 0.0087649 | 3 | 3 |
Optimal_temp.:37 | 0.0018982 | 33 | 106 |
Optimal_temp.:85 | 0.0017832 | 4 | 4 |
Oxygen_Req:Anaerobic | 0.0001815 | 35 | 102 |
Oxygen_Req:Facultative | 0.0009826 | 28 | 201 |
Salinity:Extreme_halophilic | 0.0048324 | 5 | 7 |
Shape:Irregular_coccus | 2.493e-9 | 15 | 17 |
Shape:Rod | 4.660e-9 | 44 | 347 |
Shape:Sphere | 2.708e-9 | 16 | 19 |
Temp._range:Hyperthermophilic | 2.156e-9 | 18 | 23 |
Temp._range:Mesophilic | 0.0001817 | 84 | 473 |
Temp._range:Thermophilic | 0.0039438 | 14 | 35 |
Org ID | Org Name | Pvalue | # genes in tgt genome found in org | # genes in group found in org |
BTRI382640 ncbi | Bartonella tribocorum CIP 105476 | 0.0092495 | 792 | 6 |
EG10857 | EG10832 | EG10693 | EG10530 | EG10270 | EG10247 | |
BTRI382640 | BT_0786 | BT_0788 | BT_1551 | BT_0785 | BT_0787 | BT_0784 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Disease:Bartinellosis | 0.0017153 | 1 | 1 |
Pathogenic_in:Rat | 0.0017153 | 1 | 1 |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
GLYCOCAT-PWY (glycogen degradation I) | 246 | 187 | 0.6983 |
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) | 195 | 163 | 0.6908 |
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate)) | 300 | 203 | 0.6642 |
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis) | 218 | 168 | 0.6503 |
PWY-5918 (heme biosynthesis I) | 272 | 187 | 0.6267 |
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I) | 225 | 167 | 0.6216 |
PWY-1269 (CMP-KDO biosynthesis I) | 325 | 205 | 0.6191 |
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation) | 149 | 130 | 0.6168 |
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I) | 286 | 189 | 0.6043 |
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic)) | 291 | 190 | 0.5986 |
PWY0-1319 (CDP-diacylglycerol biosynthesis II) | 296 | 191 | 0.5930 |
PWY-4041 (γ-glutamyl cycle) | 279 | 184 | 0.5882 |
PHOSLIPSYN-PWY (phospholipid biosynthesis I) | 290 | 187 | 0.5808 |
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic)) | 183 | 142 | 0.5789 |
LIPA-CORESYN-PWY (Lipid A-core biosynthesis) | 176 | 138 | 0.5739 |
NAGLIPASYN-PWY (lipid IVA biosynthesis) | 348 | 205 | 0.5685 |
PWY-5913 (TCA cycle variation IV) | 301 | 189 | 0.5674 |
AST-PWY (arginine degradation II (AST pathway)) | 120 | 108 | 0.5656 |
GLUTATHIONESYN-PWY (glutathione biosynthesis) | 339 | 201 | 0.5609 |
TYRFUMCAT-PWY (tyrosine degradation I) | 184 | 140 | 0.5606 |
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic)) | 191 | 142 | 0.5515 |
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic)) | 255 | 164 | 0.5151 |
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic)) | 398 | 212 | 0.5146 |
ECASYN-PWY (enterobacterial common antigen biosynthesis) | 191 | 136 | 0.5076 |
REDCITCYC (TCA cycle variation II) | 174 | 128 | 0.5061 |
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage) | 329 | 189 | 0.5021 |
PWY-5028 (histidine degradation II) | 130 | 105 | 0.4951 |
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis) | 156 | 117 | 0.4873 |
GLUCONSUPER-PWY (D-gluconate degradation) | 229 | 148 | 0.4768 |
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I) | 422 | 213 | 0.4757 |
PWY-5669 (phosphatidylethanolamine biosynthesis I) | 416 | 211 | 0.4728 |
PWY-5148 (acyl-CoA hydrolysis) | 227 | 146 | 0.4686 |
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I) | 249 | 154 | 0.4627 |
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff) | 249 | 154 | 0.4627 |
P344-PWY (acrylonitrile degradation) | 210 | 138 | 0.4622 |
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis) | 300 | 173 | 0.4619 |
DAPLYSINESYN-PWY (lysine biosynthesis I) | 342 | 186 | 0.4528 |
PWY-5386 (methylglyoxal degradation I) | 305 | 173 | 0.4500 |
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi)) | 81 | 73 | 0.4486 |
PWY-46 (putrescine biosynthesis III) | 138 | 103 | 0.4457 |
P601-PWY (D-camphor degradation) | 95 | 80 | 0.4396 |
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis) | 365 | 191 | 0.4368 |
PWY-5340 (sulfate activation for sulfonation) | 385 | 197 | 0.4361 |
PWY-3162 (tryptophan degradation V (side chain pathway)) | 94 | 79 | 0.4354 |
LIPASYN-PWY (phospholipases) | 212 | 135 | 0.4349 |
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer) | 96 | 80 | 0.4345 |
GLUCARDEG-PWY (D-glucarate degradation I) | 152 | 107 | 0.4240 |
PWY0-501 (lipoate biosynthesis and incorporation I) | 385 | 195 | 0.4223 |
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer) | 112 | 87 | 0.4210 |
CHOLINE-BETAINE-ANA-PWY (choline degradation I) | 135 | 98 | 0.4169 |
P184-PWY (protocatechuate degradation I (meta-cleavage pathway)) | 94 | 77 | 0.4166 |
SO4ASSIM-PWY (sulfate reduction I (assimilatory)) | 311 | 170 | 0.4156 |
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria)) | 138 | 99 | 0.4132 |
PWY0-981 (taurine degradation IV) | 106 | 82 | 0.4042 |
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway) | 374 | 189 | 0.4039 |
PWY-6087 (4-chlorocatechol degradation) | 223 | 135 | 0.4029 |
PWY-5084 (2-ketoglutarate dehydrogenase complex) | 326 | 173 | 0.4010 |
EG10832 | EG10693 | EG10530 | EG10270 | EG10247 | |
EG10857 | 0.999788 | 0.999764 | 0.999927 | 0.999929 | 0.999616 |
EG10832 | 0.999787 | 0.999737 | 0.999885 | 0.999592 | |
EG10693 | 0.999715 | 0.999785 | 0.999859 | ||
EG10530 | 0.999887 | 0.999708 | |||
EG10270 | 0.999643 | ||||
EG10247 |
EG10857 | EG10832 | EG10693 | EG10530 | EG10270 | EG10247 | |
EG10857 | 0.0f0 | - | - | - | - | - |
EG10832 | - | 0.0f0 | - | - | - | - |
EG10693 | - | - | 0.0f0 | - | - | - |
EG10530 | - | - | - | 0.0f0 | - | - |
EG10270 | - | - | - | - | 0.0f0 | - |
EG10247 | - | - | - | - | - | 0.0f0 |