CANDIDATE ID: 161

CANDIDATE ID: 161

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9985220e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.3333333e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6364 (miaB) (b0661)
   Products of gene:
     - G6364-MONOMER (isopentenyl-adenosine A37 tRNA methylthiolase MiaB)
       Reactions:
        N-6-isopentyl adenosine-37 tRNA + 2 S-adenosyl-L-methionine + a sulfurated sulfur donor  =  S-adenosyl-L-homocysteine + 2-methylthio-N-6-isopentyl adenosine-37 tRNA + L-methionine + 5'-deoxyadenosine + an unsulfurated sulfur acceptor

- G6363 (ybeZ) (b0660)
   Products of gene:
     - G6363-MONOMER (predicted protein with nucleoside triphosphate hydrolase domain)

- G6362 (ybeY) (b0659)
   Products of gene:
     - G6362-MONOMER (conserved protein involved in translation)

- G6361 (ybeX) (b0658)
   Products of gene:
     - G6361-MONOMER (predicted ion transport protein)

- EG11734 (phoH) (b1020)
   Products of gene:
     - EG11734-MONOMER (ATP-binding protein)

- EG10168 (lnt) (b0657)
   Products of gene:
     - EG10168-MONOMER (apolipoprotein N-acyltransferase)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 289
Effective number of orgs (counting one per cluster within 468 clusters): 205

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM46
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TTHE300852 ncbi Thermus thermophilus HB85
TTHE262724 ncbi Thermus thermophilus HB275
TSP28240 Thermotoga sp.5
TPET390874 ncbi Thermotoga petrophila RKU-15
TMAR243274 ncbi Thermotoga maritima MSB85
TFUS269800 ncbi Thermobifida fusca YX5
TELO197221 ncbi Thermosynechococcus elongatus BP-15
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SAVE227882 ncbi Streptomyces avermitilis MA-46806
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SARE391037 ncbi Salinispora arenicola CNS-2055
SALA317655 ncbi Sphingopyxis alaskensis RB22566
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSP101510 ncbi Rhodococcus jostii RHA15
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NSP35761 Nocardioides sp.5
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NHAM323097 ncbi Nitrobacter hamburgensis X146
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NFAR247156 ncbi Nocardia farcinica IFM 101526
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16226
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-16
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra6
MTUB336982 ncbi Mycobacterium tuberculosis F116
MTBRV ncbi Mycobacterium tuberculosis H37Rv6
MTBCDC ncbi Mycobacterium tuberculosis CDC15516
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC15
MSP189918 ncbi Mycobacterium sp. KMS6
MSP164757 ncbi Mycobacterium sp. JLS6
MSP164756 ncbi Mycobacterium sp. MCS6
MSME246196 ncbi Mycobacterium smegmatis MC2 1556
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAR394221 ncbi Maricaulis maris MCS105
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MLEP272631 ncbi Mycobacterium leprae TN5
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK5
MFLA265072 ncbi Methylobacillus flagellatus KT6
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath6
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P26
MBOV233413 ncbi Mycobacterium bovis AF2122/976
MAVI243243 ncbi Mycobacterium avium 1045
MAQU351348 ncbi Marinobacter aquaeolei VT86
MABS561007 ncbi Mycobacterium abscessus ATCC 199775
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LCHO395495 ncbi Leptothrix cholodnii SP-65
KRAD266940 ncbi Kineococcus radiotolerans SRS302166
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HHAL349124 ncbi Halorhodospira halophila SL16
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GBET391165 ncbi Granulibacter bethesdensis CGDNIH16
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-006
FTUL418136 ncbi Francisella tularensis tularensis WY96-34186
FTUL401614 ncbi Francisella novicida U1126
FTUL393115 ncbi Francisella tularensis tularensis FSC1986
FTUL393011 ncbi Francisella tularensis holarctica OSU186
FTUL351581 Francisella tularensis holarctica FSC2006
FRANT ncbi Francisella tularensis tularensis SCHU S46
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPHY357809 ncbi Clostridium phytofermentans ISDg5
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3825
CMIC31964 ncbi Clavibacter michiganensis sepedonicus5
CJEI306537 ncbi Corynebacterium jeikeium K4115
CJAP155077 Cellvibrio japonicus6
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130325
CEFF196164 ncbi Corynebacterium efficiens YS-3145
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131296
CDIF272563 ncbi Clostridium difficile 6305
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTRI382640 ncbi Bartonella tribocorum CIP 1054766
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.5
BQUI283165 ncbi Bartonella quintana Toulouse6
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BHEN283166 ncbi Bartonella henselae Houston-16
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC360095 ncbi Bartonella bacilliformis KC5836
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACEL351607 ncbi Acidothermus cellulolyticus 11B5
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-16
AAEO224324 ncbi Aquifex aeolicus VF55


Names of the homologs of the genes in the group in each of these orgs
  G6364   G6363   G6362   G6361   EG11734   EG10168   
ZMOB264203 ZMO0077ZMO0075ZMO0074ZMO0073ZMO0075ZMO0271
YPSE349747 YPSIP31758_2915YPSIP31758_2916YPSIP31758_2917YPSIP31758_2918YPSIP31758_2125YPSIP31758_2919
YPSE273123 YPTB1113YPTB1112YPTB1111YPTB1110YPTB1955YPTB1109
YPES386656 YPDSF_2632YPDSF_2633YPDSF_2634YPDSF_2636YPDSF_1165YPDSF_2637
YPES377628 YPN_1106YPN_1105YPN_1104YPN_1102YPN_1101
YPES360102 YPA_2477YPA_2478YPA_2479YPA_2480YPA_1340YPA_2481
YPES349746 YPANGOLA_A1829YPANGOLA_A1830YPANGOLA_A1832YPANGOLA_A1833YPANGOLA_A1834
YPES214092 YPO2620YPO2619YPO2618YPO2617YPO1957YPO2616
YPES187410 Y1195Y1194Y1193Y1191Y2353Y1190
YENT393305 YE2985YE2986YE2987YE2988YE2478YE2989
XORY360094 XOOORF_1940XOOORF_1939XOOORF_1937XOOORF_1935XOOORF_1939
XORY342109 XOO2606XOO2607XOO2609XOO2611XOO2607
XORY291331 XOO2766XOO2767XOO2769XOO2771XOO2767
XFAS405440 XFASM12_1947XFASM12_1948XFASM12_1949XFASM12_1951XFASM12_1948
XFAS183190 PD_1779PD_1780PD_1781PD_1783PD_1780
XFAS160492 XF0906XF0904XF0903XF0901XF0904
XCAM487884 XCC-B100_1844XCC-B100_1843XCC-B100_1841XCC-B100_1839XCC-B100_1843
XCAM316273 XCAORF_2602XCAORF_2603XCAORF_2605XCAORF_2607XCAORF_2603
XCAM314565 XC_1788XC_1787XC_1785XC_1783XC_1787
XCAM190485 XCC2328XCC2329XCC2331XCC2333XCC2329
XAXO190486 XAC2461XAC2462XAC2464XAC2466XAC2462
VVUL216895 VV1_0266VV1_0267VV1_0268VV1_0269VV1_0267VV1_0270
VVUL196600 VV0917VV0916VV0915VV0914VV0916VV0913
VPAR223926 VP0733VP0732VP0731VP0730VP0732VP0729
VFIS312309 VF0759VF0758VF0757VF0756VF0758VF0755
VEIS391735 VEIS_1721VEIS_4067VEIS_4066VEIS_2157VEIS_4067VEIS_2158
VCHO345073 VC0395_A0484VC0395_A0483VC0395_A0482VC0395_A0481VC0395_A0483VC0395_A0480
VCHO VC0962VC0961VC0960VC0959VC0961VC0958
TTUR377629 TERTU_3874TERTU_3875TERTU_3876TERTU_3877TERTU_3875TERTU_3878
TTHE300852 TTHA1308TTHA1046TTHA0734TTHA1046TTHA0484
TTHE262724 TT_C0942TT_C0684TT_C0382TT_C0684TT_C0110
TSP28240 TRQ2_0276TRQ2_1401TRQ2_1403TRQ2_0082TRQ2_0363
TPET390874 TPET_0278TPET_1285TPET_1283TPET_0082TPET_0345
TMAR243274 TM_0653TM_1507TM_1509TM_0845TM_0573
TFUS269800 TFU_0811TFU_0844TFU_0845TFU_0846TFU_1762
TELO197221 TLR1315TLL0037TLR1585TLL0037TLL1667
TDEN292415 TBD_2706TBD_2705TBD_2704TBD_2703TBD_2584
TCRU317025 TCR_0473TCR_0474TCR_0475TCR_0476TCR_0474TCR_0477
STYP99287 STM0670STM0669STM0668STM0667STM1126STM0666
SSP94122 SHEWANA3_1008SHEWANA3_1007SHEWANA3_1006SHEWANA3_1005SHEWANA3_1007SHEWANA3_1004
SSP292414 TM1040_0185TM1040_0188TM1040_0190TM1040_1427TM1040_0192
SSON300269 SSO_0615SSO_0614SSO_0613SSO_0612SSO_1039SSO_0611
SSED425104 SSED_3471SSED_3472SSED_3473SSED_3474SSED_3472SSED_3475
SPRO399741 SPRO_1220SPRO_1218SPRO_1217SPRO_1216SPRO_2925SPRO_1215
SPEA398579 SPEA_3137SPEA_3138SPEA_3139SPEA_3140SPEA_3141
SONE211586 SO_1181SO_1180SO_1179SO_1178SO_1180SO_1177
SMEL266834 SMC01115SMC01114SMC01113SMC01114SMC01111
SMED366394 SMED_0040SMED_0041SMED_0042SMED_0043SMED_0041SMED_0044
SLOI323850 SHEW_2923SHEW_2924SHEW_2925SHEW_2926SHEW_2927
SLAC55218 SL1157_0275SL1157_0273SL1157_0272SL1157_0271SL1157_0270
SHIGELLA YLEAYBEZYBEYYBEXYBEZLNT
SHAL458817 SHAL_3222SHAL_3223SHAL_3224SHAL_3225SHAL_3223SHAL_3226
SGLO343509 SG0811SG0810SG0809SG0808SG0810SG0807
SFUM335543 SFUM_0419SFUM_2163SFUM_2165SFUM_0722SFUM_0723
SFLE373384 SFV_0666SFV_0667SFV_0668SFV_0669SFV_0667SFV_0670
SFLE198214 AAN42258.1AAN42259.1AAN42260.1AAN42261.1AAN42648.1AAN42262.1
SEPI176280 SE_0971SE_1258SE_1257SE_0474SE_1258
SEPI176279 SERP0860SERP1138SERP1137SERP0361SERP1138
SENT454169 SEHA_C0788SEHA_C0787SEHA_C0786SEHA_C0785SEHA_C1236SEHA_C0784
SENT321314 SCH_0698SCH_0697SCH_0696SCH_0695SCH_1077SCH_0694
SENT295319 SPA2070SPA2071SPA2072SPA2073SPA1725SPA2074
SENT220341 STY0716STY0715STY0714STY0712STY1162STY0711
SENT209261 T2203T2204T2205T2206T1795T2207
SDYS300267 SDY_0597SDY_0596SDY_0595SDY_0594SDY_0596SDY_0593
SDEN318161 SDEN_0815SDEN_0814SDEN_0813SDEN_0812SDEN_0811
SDEG203122 SDE_3300SDE_3301SDE_3302SDE_3303SDE_3301SDE_3304
SBOY300268 SBO_0525SBO_0524SBO_0523SBO_0522SBO_2038SBO_0521
SBAL402882 SHEW185_3303SHEW185_3304SHEW185_3305SHEW185_3306SHEW185_3304SHEW185_3307
SBAL399599 SBAL195_3439SBAL195_3440SBAL195_3441SBAL195_3442SBAL195_3440SBAL195_3443
SAVE227882 SAV2479SAV5583SAV5584SAV5585SAV5583SAV7016
SAUR282458 SAR1268SAR1648SAR1647SAR0755SAR1648
SARE391037 SARE_1400SARE_3832SARE_3831SARE_3830SARE_2388
SALA317655 SALA_2064SALA_2063SALA_2159SALA_2158SALA_2063SALA_3138
RSPH349102 RSPH17025_3872RSPH17025_3873RSPH17025_3874RSPH17025_3873RSPH17025_3876
RSPH349101 RSPH17029_3285RSPH17029_3284RSPH17029_3283RSPH17029_3284RSPH17029_3281
RSPH272943 RSP_3600RSP_3599RSP_3598RSP_3599RSP_3596
RSP101510 RHA1_RO06771RHA1_RO01242RHA1_RO01241RHA1_RO01240RHA1_RO00146
RSOL267608 RSC0531RSC0530RSC0529RSC0528RSC0530RSC0527
RRUB269796 RRU_A3770RRU_A3771RRU_A3772RRU_A3773RRU_A3771RRU_A3774
RPAL316058 RPB_0590RPB_0591RPB_0592RPB_0593RPB_0591RPB_0594
RPAL316057 RPD_0242RPD_0241RPD_0240RPD_0292RPD_0241RPD_0238
RPAL316056 RPC_0468RPC_0469RPC_0470RPC_0471RPC_0469RPC_0472
RPAL316055 RPE_0206RPE_0205RPE_0204RPE_0205RPE_0202
RPAL258594 RPA0448RPA0446RPA0445RPA0447RPA0444
RMET266264 RMET_0453RMET_0452RMET_0451RMET_0450RMET_0449
RLEG216596 RL0395RL0394RL0393RL0394RL0391
RFER338969 RFER_3365RFER_0738RFER_0737RFER_3698RFER_3697
REUT381666 H16_A0528H16_A0527H16_A0526H16_A0525H16_A0527H16_A0524
REUT264198 REUT_A0514REUT_A0513REUT_A0512REUT_A0511REUT_A0510
RETL347834 RHE_CH00376RHE_CH00375RHE_CH00374RHE_CH00375RHE_CH00372
RDEN375451 RD1_3921RD1_3920RD1_3919RD1_3918RD1_3917
PSYR223283 PSPTO_4804PSPTO_4805PSPTO_4806PSPTO_4807PSPTO_4805PSPTO_4808
PSYR205918 PSYR_4345PSYR_4346PSYR_4347PSYR_4348PSYR_4346PSYR_4349
PSTU379731 PST_3761PST_3762PST_3763PST_3764PST_3762PST_3765
PSP56811 PSYCPRWF_1875PSYCPRWF_1970PSYCPRWF_1971PSYCPRWF_2247PSYCPRWF_1970PSYCPRWF_2337
PSP296591 BPRO_1120BPRO_4095BPRO_4096BPRO_4209BPRO_4208
PPUT76869 PPUTGB1_4841PPUTGB1_4842PPUTGB1_4843PPUTGB1_4841PPUTGB1_4844
PPUT351746 PPUT_4663PPUT_4664PPUT_4665PPUT_4663PPUT_4666
PPUT160488 PP_4787PP_4788PP_4789PP_4787PP_4790
PPRO298386 PBPRA2878PBPRA2879PBPRA2880PBPRA2881PBPRA2879PBPRA2882
PNAP365044 PNAP_3373PNAP_0509PNAP_0508PNAP_0439PNAP_0440
PMUL272843 PM1001PM1046PM1045PM1033PM1046PM1032
PMEN399739 PMEN_3779PMEN_3780PMEN_3781PMEN_3782PMEN_3780PMEN_3783
PLUM243265 PLU1312PLU1311PLU1310PLU1309PLU2039PLU1308
PING357804 PING_0535PING_0534PING_0533PING_0532PING_0534PING_0531
PHAL326442 PSHAA1046PSHAA1045PSHAA1044PSHAA1043PSHAA1045PSHAA1042
PFLU220664 PFL_5432PFL_5433PFL_5434PFL_5435PFL_5433PFL_5436
PFLU216595 PFLU5404PFLU5405PFLU5406PFLU5407PFLU5405PFLU5408
PFLU205922 PFL_4950PFL_4951PFL_4952PFL_4953PFL_4951PFL_4954
PENT384676 PSEEN4807PSEEN4808PSEEN4809PSEEN4807PSEEN4810
PCRY335284 PCRYO_2047PCRYO_0591PCRYO_0590PCRYO_2277PCRYO_0591PCRYO_2276
PCAR338963 PCAR_1214PCAR_1231PCAR_1233PCAR_2212PCAR_1231PCAR_1236
PATL342610 PATL_2206PATL_2207PATL_2208PATL_2209PATL_2207PATL_2210
PARC259536 PSYC_1766PSYC_0627PSYC_0626PSYC_1977PSYC_0627PSYC_1976
PAER208964 PA3980PA3981PA3982PA3983PA3981PA3984
PAER208963 PA14_12350PA14_12330PA14_12310PA14_12300PA14_12330PA14_12280
OIHE221109 OB1628OB1955OB1953OB2401OB1955
OCAR504832 OCAR_4521OCAR_4520OCAR_4519OCAR_4520OCAR_4517
OANT439375 OANT_0758OANT_0757OANT_0756OANT_0757OANT_0754
NWIN323098 NWI_0014NWI_0015NWI_0016NWI_0017NWI_0015NWI_0018
NSP35761 NOCA_3847NOCA_1912NOCA_1913NOCA_1914NOCA_2666
NOCE323261 NOC_0237NOC_0238NOC_0239NOC_0240NOC_0238NOC_0241
NMUL323848 NMUL_A2692NMUL_A2696NMUL_A2697NMUL_A2698NMUL_A0552
NMEN374833 NMCC_0355NMCC_0804NMCC_0479NMCC_0477NMCC_0804NMCC_0672
NMEN272831 NMC0353NMC0784NMC0477NMC0476NMC0784NMC0664
NMEN122587 NMA0590NMA1056NMA0717NMA0716NMA1056NMA0918
NMEN122586 NMB_1866NMB_0845NMB_0538NMB_0537NMB_0845NMB_0713
NHAM323097 NHAM_0021NHAM_0022NHAM_0023NHAM_0024NHAM_0022NHAM_0025
NGON242231 NGO0037NGO0417NGO0145NGO0144NGO0289
NFAR247156 NFA38350NFA14320NFA14330NFA14340NFA14320NFA31180
NEUT335283 NEUT_1789NEUT_1788NEUT_1787NEUT_1786NEUT_1870
NEUR228410 NE2335NE2334NE2333NE2332NE1188
NARO279238 SARO_0982SARO_0981SARO_0980SARO_0981SARO_0285
MXAN246197 MXAN_3784MXAN_4738MXAN_4736MXAN_1301MXAN_4738MXAN_0136
MVAN350058 MVAN_2429MVAN_3832MVAN_3831MVAN_3830MVAN_3832MVAN_3419
MTUB419947 MRA_2759MRA_2392MRA_2391MRA_2390MRA_2392MRA_2066
MTUB336982 TBFG_12746TBFG_12394TBFG_12393TBFG_12392TBFG_12394TBFG_12088
MTBRV RV2733CRV2368CRV2367CRV2366CRV2368CRV2051C
MTBCDC MT2803MT2437MT2436MT2435MT2437MT2111
MSUC221988 MS1690MS1682MS1680MS0651MS1682MS0652
MSP409 M446_3182M446_3181M446_3180M446_3179M446_3181M446_3178
MSP400668 MMWYL1_2909MMWYL1_2910MMWYL1_2911MMWYL1_2912MMWYL1_2910MMWYL1_2913
MSP266779 MESO_3919MESO_3920MESO_3921MESO_3920MESO_4441
MSP189918 MKMS_2203MKMS_3519MKMS_3518MKMS_3517MKMS_3519MKMS_2547
MSP164757 MJLS_2144MJLS_3467MJLS_3466MJLS_3465MJLS_3467MJLS_2539
MSP164756 MMCS_2157MMCS_3456MMCS_3455MMCS_3454MMCS_3456MMCS_2502
MSME246196 MSMEG_2729MSMEG_4497MSMEG_4496MSMEG_4495MSMEG_4497MSMEG_3860
MPET420662 MPE_A0532MPE_A3239MPE_A3240MPE_A3385MPE_A3239MPE_A3384
MMAR394221 MMAR10_3033MMAR10_3035MMAR10_2275MMAR10_3034MMAR10_3037
MMAG342108 AMB4463AMB4464AMB4465AMB4466AMB4464AMB4467
MLOT266835 MLR5534MLR5535MLR5536MLR5535MLR5543
MLEP272631 ML0989ML0627ML0628ML0627ML1441
MGIL350054 MFLV_3967MFLV_2706MFLV_2707MFLV_2708MFLV_3117
MFLA265072 MFLA_0651MFLA_0650MFLA_0649MFLA_0648MFLA_0650MFLA_0646
MEXT419610 MEXT_3204MEXT_3205MEXT_3206MEXT_3205MEXT_3208
MCAP243233 MCA_1459MCA_1458MCA_1457MCA_1456MCA_1458MCA_1455
MBOV410289 BCG_2746CBCG_2382CBCG_2381CBCG_2380CBCG_2382CBCG_2070C
MBOV233413 MB2752CMB2389CMB2388CMB2387CMB2389CMB2077C
MAVI243243 MAV_3625MAV_2025MAV_2028MAV_2025MAV_2446
MAQU351348 MAQU_2738MAQU_2739MAQU_2740MAQU_2741MAQU_2739MAQU_2742
MABS561007 MAB_3048CMAB_1668MAB_1669MAB_1670MAB_2206
LSPH444177 BSPH_1652BSPH_3716BSPH_3714BSPH_0370BSPH_3716
LPNE400673 LPC_0750LPC_0857LPC_0856LPC_0855LPC_0857LPC_0765
LPNE297246 LPP1288LPP1396LPP1395LPP1394LPP1396LPP1303
LPNE297245 LPL1287LPL1600LPL1601LPL1602LPL1600LPL1302
LPNE272624 LPG1334LPG1441LPG1440LPG1439LPG1441LPG1349
LCHO395495 LCHO_0584LCHO_3950LCHO_3949LCHO_3833LCHO_3832
KRAD266940 KRAD_1499KRAD_3387KRAD_3386KRAD_3385KRAD_3387KRAD_1890
KPNE272620 GKPORF_B5110GKPORF_B5109GKPORF_B5108GKPORF_B5107GKPORF_B5488.3GKPORF_B5106
JSP375286 MMA_0431MMA_0430MMA_0429MMA_0428MMA_0430MMA_0427
JSP290400 JANN_0697JANN_0700JANN_0703JANN_0700JANN_0705
ILOI283942 IL0941IL0942IL0943IL0944IL0942IL0945
HSOM228400 HSM_1572HSM_0614HSM_0615HSM_0111HSM_0614HSM_0112
HSOM205914 HS_1155HS_0345HS_0346HS_0237HS_0345HS_0238
HHAL349124 HHAL_0893HHAL_0892HHAL_0891HHAL_0890HHAL_0892HHAL_0889
HCHE349521 HCH_05348HCH_05349HCH_05350HCH_05351HCH_05349HCH_05352
HARS204773 HEAR0381HEAR0380HEAR0379HEAR0378HEAR0380HEAR0377
GVIO251221 GLR4015GLL3611GLL1243GLL3611GLR1731
GTHE420246 GTNG_1157GTNG_2430GTNG_2428GTNG_0540GTNG_2430
GKAU235909 GK1303GK2493GK2491GK0628GK2493
GBET391165 GBCGDNIH1_0118GBCGDNIH1_0117GBCGDNIH1_0116GBCGDNIH1_0115GBCGDNIH1_0117GBCGDNIH1_0392
FTUL458234 FTA_0937FTA_0936FTA_0935FTA_0934FTA_0936FTA_0933
FTUL418136 FTW_1110FTW_1111FTW_1112FTW_1113FTW_1111FTW_1114
FTUL401614 FTN_1063FTN_1064FTN_1065FTN_1066FTN_1064FTN_1067
FTUL393115 FTF0618CFTF0617CFTF0616CFTF0615CFTF0617CFTF0614C
FTUL393011 FTH_0872FTH_0871FTH_0870FTH_0869FTH_0871FTH_0868
FTUL351581 FTL_0886FTL_0885FTL_0884FTL_0883FTL_0885FTL_0882
FRANT YLEAPHOHFT.0617CFT.0616CPHOHFT.0615C
FPHI484022 FPHI_0023FPHI_0024FPHI_0025FPHI_0026FPHI_0027
ESP42895 ENT638_1187ENT638_1186ENT638_1185ENT638_1184ENT638_1548ENT638_1183
ELIT314225 ELI_08495ELI_08500ELI_08505ELI_08500ELI_14280
EFER585054 EFER_2441EFER_2442EFER_2443EFER_2444EFER_1908EFER_2445
ECOO157 YLEAYBEZYBEYYBEXPHOHLNT
ECOL83334 ECS0699ECS0698ECS0697ECS0696ECS1266ECS0695
ECOL585397 ECED1_0652ECED1_0651ECED1_0650ECED1_0649ECED1_1175ECED1_0648
ECOL585057 ECIAI39_0628ECIAI39_0627ECIAI39_0626ECIAI39_0625ECIAI39_2136ECIAI39_0624
ECOL585056 ECUMN_0754ECUMN_0753ECUMN_0752ECUMN_0751ECUMN_1205ECUMN_0750
ECOL585055 EC55989_0656EC55989_0655EC55989_0654EC55989_0653EC55989_1131EC55989_0652
ECOL585035 ECS88_0696ECS88_0695ECS88_0694ECS88_0693ECS88_1036ECS88_0692
ECOL585034 ECIAI1_0645ECIAI1_0644ECIAI1_0643ECIAI1_0642ECIAI1_1065ECIAI1_0641
ECOL481805 ECOLC_2984ECOLC_2985ECOLC_2986ECOLC_2987ECOLC_2576ECOLC_2988
ECOL469008 ECBD_2990ECBD_2991ECBD_2992ECBD_2993ECBD_2574ECBD_2994
ECOL439855 ECSMS35_0684ECSMS35_0682ECSMS35_0681ECSMS35_0680ECSMS35_2103ECSMS35_0678
ECOL413997 ECB_00629ECB_00628ECB_00627ECB_00626ECB_01022ECB_00625
ECOL409438 ECSE_0732ECSE_0731ECSE_0730ECSE_0729ECSE_1085ECSE_0728
ECOL405955 APECO1_1402APECO1_1403APECO1_1404APECO1_1405APECO1_111APECO1_1406
ECOL364106 UTI89_C0659UTI89_C0658UTI89_C0657UTI89_C0656UTI89_C1083UTI89_C0655
ECOL362663 ECP_0684ECP_0683ECP_0682ECP_0681ECP_1019ECP_0680
ECOL331111 ECE24377A_0690ECE24377A_0689ECE24377A_0688ECE24377A_0687ECE24377A_0689ECE24377A_0686
ECOL316407 ECK0653:JW0658:B0661ECK0652:JW0657:B0660ECK0651:JW0656:B0659ECK0650:JW0655:B0658ECK1010:JW1005:B1020ECK0649:JW0654:B0657
ECOL199310 C0747C0745C0744C0743C1159C0742
ECAR218491 ECA1319ECA1318ECA1317ECA1316ECA1741ECA1315
DSHI398580 DSHI_1019DSHI_1016DSHI_1015DSHI_1613DSHI_3951
DPSY177439 DP1927DP1606DP1811DP1606DP1810
DOLE96561 DOLE_2355DOLE_0779DOLE_0777DOLE_0779DOLE_1768
DNOD246195 DNO_1245DNO_1244DNO_1243DNO_0936DNO_1244DNO_0247
DHAF138119 DSY1595DSY3111DSY3109DSY2107DSY3111
DARO159087 DARO_3527DARO_3528DARO_3529DARO_3530DARO_3528DARO_3531
CVIO243365 CV_4149CV_4151CV_4152CV_4153CV_4154
CSP501479 CSE45_2812CSE45_2809CSE45_2808CSE45_2807CSE45_2806
CSAL290398 CSAL_2334CSAL_2335CSAL_2336CSAL_2337CSAL_2335CSAL_2338
CPSY167879 CPS_3572CPS_3573CPS_3574CPS_3575CPS_3573CPS_3576
CPHY357809 CPHY_2599CPHY_2611CPHY_3015CPHY_2611CPHY_1912
CMIC443906 CMM_2023CMM_1568CMM_1569CMM_1570CMM_1684
CMIC31964 CMS1210CMS1735CMS1734CMS1733CMS1679
CJEI306537 JK1114JK0603JK0605JK0603JK0936
CJAP155077 CJA_1640CJA_1638CJA_1637CJA_1636CJA_1389CJA_1635
CGLU196627 CG2135CG2513CG2512CG2511CG1673
CEFF196164 CE1843CE2187CE2186CE2185CE1607
CDIP257309 DIP1448DIP1718DIP1717DIP1716DIP1718DIP1227
CDIF272563 CD1986CD2441ACD2440CD2858CD2441A
CBUR434922 COXBU7E912_1494COXBU7E912_1495COXBU7E912_1496COXBU7E912_1498COXBU7E912_1495COXBU7E912_1499
CBUR360115 COXBURSA331_A0683COXBURSA331_A0682COXBURSA331_A0681COXBURSA331_A0679COXBURSA331_A0682COXBURSA331_A0678
CBUR227377 CBU_0569CBU_0568CBU_0567CBU_0565CBU_0568CBU_0564
BWEI315730 BCERKBAB4_3543BCERKBAB4_4156BCERKBAB4_4154BCERKBAB4_2107BCERKBAB4_4156
BVIE269482 BCEP1808_2795BCEP1808_2796BCEP1808_2797BCEP1808_2799BCEP1808_2796BCEP1808_2800
BTRI382640 BT_0250BT_0249BT_0248BT_0247BT_0249BT_0246
BTHA271848 BTH_I0591BTH_I0590BTH_I0589BTH_I0587BTH_I0590BTH_I0586
BSUI470137 BSUIS_A1991BSUIS_A1992BSUIS_A1993BSUIS_A1992BSUIS_A1995
BSUI204722 BR_2153BR_2155BR_2156BR_2155BR_2158
BSUB BSU17010BSU25340BSU25320BSU31300BSU25340
BSP376 BRADO0041BRADO0042BRADO0043BRADO0044BRADO0042BRADO0045
BSP36773 BCEP18194_A6021BCEP18194_A6022BCEP18194_A6023BCEP18194_A6025BCEP18194_A6026
BQUI283165 BQ02140BQ02130BQ02120BQ02110BQ02130BQ02100
BPSE320373 BURPS668_0710BURPS668_0709BURPS668_0706BURPS668_0709BURPS668_0703
BPSE320372 BURPS1710B_A0935BURPS1710B_A0934BURPS1710B_A0932BURPS1710B_A0930BURPS1710B_A0934BURPS1710B_A0929
BPSE272560 BPSL0674BPSL0673BPSL0672BPSL0670BPSL0673BPSL0669
BPET94624 BPET3654BPET3655BPET3656BPET3657BPET3655BPET3658
BPER257313 BP1041BP1040BP1039BP1038BP1040
BPAR257311 BPP1141BPP1140BPP1139BPP1138BPP1140BPP1137
BOVI236 GBOORF2144GBOORF2145GBOORF2146GBOORF2145GBOORF2148
BMEL359391 BAB1_2154BAB1_2155BAB1_2156BAB1_2155BAB1_2158
BMEL224914 BMEI1976BMEI1975BMEI1974BMEI1975BMEI1972
BMAL320389 BMA10247_2438BMA10247_2437BMA10247_2435BMA10247_2433BMA10247_2437BMA10247_2432
BMAL320388 BMASAVP1_A2720BMASAVP1_A2721BMASAVP1_A2723BMASAVP1_A2725BMASAVP1_A2721BMASAVP1_A2726
BMAL243160 BMA_0226BMA_0225BMA_0223BMA_0221BMA_0225BMA_0220
BLIC279010 BL03660BL03669BL03671BL02455BL03669
BJAP224911 BLL0795BLL0794BLL0793BLL0792BLL0794BLL0791
BHEN283166 BH02260BH02250BH02240BH02230BH02250BH02220
BCER315749 BCER98_2424BCER98_3031BCER98_3029BCER98_2138BCER98_3031
BCEN331272 BCEN2424_2693BCEN2424_2694BCEN2424_2695BCEN2424_2698BCEN2424_2699
BCEN331271 BCEN_2081BCEN_2082BCEN_2083BCEN_2086BCEN_2087
BCAN483179 BCAN_A2196BCAN_A2197BCAN_A2198BCAN_A2197BCAN_A2200
BBRO257310 BB1357BB1356BB1355BB1354BB1356BB1353
BBAC360095 BARBAKC583_1243BARBAKC583_1244BARBAKC583_1245BARBAKC583_1246BARBAKC583_1244BARBAKC583_1247
BAMY326423 RBAM_016850RBAM_023640RBAM_023620RBAM_023070RBAM_023640
BAMB398577 BAMMC406_2610BAMMC406_2611BAMMC406_2612BAMMC406_2615BAMMC406_2611BAMMC406_2616
BAMB339670 BAMB_2746BAMB_2747BAMB_2748BAMB_2750BAMB_2747BAMB_2751
BABO262698 BRUAB1_2127BRUAB1_2128BRUAB1_2129BRUAB1_2128BRUAB1_2131
ASP76114 EBA1339EBA1337EBA1336EBA1335EBA1337EBA1334
ASP62977 ACIAD3158ACIAD3159ACIAD3160ACIAD0416ACIAD3159ACIAD0415
ASP62928 AZO0778AZO0779AZO0780AZO0781AZO0779AZO0782
ASP232721 AJS_3625AJS_3701AJS_3702AJS_0523AJS_3701AJS_0524
ASAL382245 ASA_1074ASA_1073ASA_1072ASA_1071ASA_1073ASA_1070
APLE434271 APJL_1339APJL_0339APJL_0692APJL_0390APJL_0339APJL_0389
APLE416269 APL_1325APL_0324APL_0694APL_0372APL_0324APL_0371
AORE350688 CLOS_1555CLOS_1246CLOS_1248CLOS_0671CLOS_1246
AMET293826 AMET_2545AMET_3033AMET_3031AMET_1343AMET_3033
AHYD196024 AHA_3241AHA_3242AHA_3243AHA_3244AHA_3242AHA_3245
AFER243159 AFE_2444AFE_2443AFE_2442AFE_2441AFE_2443AFE_2440
AEHR187272 MLG_0394MLG_0395MLG_0396MLG_0397MLG_0395MLG_0398
ADEH290397 ADEH_2355ADEH_2721ADEH_2719ADEH_3839ADEH_2721ADEH_2717
ACRY349163 ACRY_1353ACRY_1354ACRY_1356ACRY_1354ACRY_0020
ACEL351607 ACEL_1488ACEL_0789ACEL_0790ACEL_0791ACEL_1210
ABOR393595 ABO_1934ABO_1935ABO_1936ABO_1937ABO_1935ABO_1940
ABAU360910 BAV0835BAV0836BAV0837BAV0838BAV0836BAV0839
ABAC204669 ACID345_1874ACID345_3538ACID345_3536ACID345_3538ACID345_2341
AAVE397945 AAVE_0875AAVE_4241AAVE_4242AAVE_4185AAVE_4241AAVE_4184
AAEO224324 AQ_284AQ_1351AQ_1354AQ_1351AQ_819


Organism features enriched in list (features available for 273 out of the 289 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.841e-62392
Endospores:No 4.129e-868211
GC_Content_Range4:0-40 9.461e-3630213
GC_Content_Range4:40-60 3.332e-6131224
GC_Content_Range4:60-100 7.211e-18112145
GC_Content_Range7:0-30 1.060e-12147
GC_Content_Range7:30-40 1.938e-2029166
GC_Content_Range7:50-60 4.143e-977107
GC_Content_Range7:60-70 3.396e-18106134
Genome_Size_Range5:0-2 1.769e-3114155
Genome_Size_Range5:2-4 0.004695779197
Genome_Size_Range5:4-6 7.345e-26144184
Genome_Size_Range5:6-10 0.00001153647
Genome_Size_Range9:1-2 2.374e-2214128
Genome_Size_Range9:2-3 0.000069638120
Genome_Size_Range9:4-5 3.722e-147896
Genome_Size_Range9:5-6 4.473e-96688
Genome_Size_Range9:6-8 5.046e-63138
Gram_Stain:Gram_Neg 5.519e-21211333
Gram_Stain:Gram_Pos 8.740e-843150
Habitat:Host-associated 0.009580485206
Habitat:Multiple 0.001364099178
Habitat:Specialized 0.00438861653
Habitat:Terrestrial 0.00851842131
Motility:No 0.000066451151
Motility:Yes 0.0000115150267
Optimal_temp.:25-30 8.981e-61819
Optimal_temp.:30-37 0.0058812318
Oxygen_Req:Aerobic 1.083e-8118185
Oxygen_Req:Anaerobic 6.859e-1415102
Oxygen_Req:Facultative 0.0024047109201
Pathogenic_in:Plant 0.00706611215
Shape:Coccobacillus 0.00021281111
Shape:Coccus 3.891e-71882
Shape:Rod 3.171e-23220347
Shape:Sphere 0.0006981219
Shape:Spiral 8.052e-6434
Temp._range:Hyperthermophilic 0.0004873323
Temp._range:Mesophilic 0.0013574235473
Temp._range:Psychrophilic 0.001008199
Temp._range:Thermophilic 0.0016995835



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 100
Effective number of orgs (counting one per cluster within 468 clusters): 88

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL357544 ncbi Helicobacter pylori HPAG10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCUR360105 ncbi Campylobacter curvus 525.921
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  G6364   G6363   G6362   G6361   EG11734   EG10168   
UURE95667
UURE95664 UUR10_0561
UPAR505682
UMET351160
TVOL273116
TPEN368408
TKOD69014
TACI273075
STOK273063
SSP387093 SUN_1265
SSOL273057
SPYO370553
SMAR399550
SACI330779
RALB246199 GRAORF_0928
PTOR263820
PMAR59920 PMN2A_0851
PMAR167555 NATL1_17041
PMAR167540 PMM1284
PMAR167539 PRO_1358
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NPHA348780 NP1414A
MTHE349307
MTHE187420
MSYN262723 MS53_0389
MSTA339860
MSED399549
MPUL272635
MPNE272634
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407 MEMAR_1977
MMAR267377
MLAB410358 MLAB_1278
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_3011
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
IHOS453591
HWAL362976 HQ3705A
HSP64091 VNG6302C
HSAL478009 OE5193F
HPYL357544
HMUK485914 HMUK_0760
HMAR272569 RRNAC2600
HHEP235279 HH_1628
HBUT415426
HAUR316274 HAUR_4588
HACI382638 HAC_1750
FJOH376686 FJOH_1539
DSP255470 CBDBA1389
DSP216389 DEHABAV1_1233
DETH243164
CTRA471473 CTLON_0791
CTRA471472 CTL0796
CTET212717 CTC_01303
CSUL444179
CPNE182082 CPB0679
CPNE138677 CPJ0653
CPNE115713 CPN0653
CPNE115711 CP_0094
CMUR243161 TC_0821
CMET456442 MBOO_1891
CMAQ397948
CKOR374847
CHOM360107
CFEL264202 CF0919
CCUR360105 CCV52592_0644
CCAV227941 CCA_00087
CBOT515621 CLJ_B1979
CBOT441771 CLC_1743
CBOT441770 CLB_1736
CBOT36826 CBO1801
CABO218497
BXEN266265
AYEL322098
AURANTIMONAS
APER272557
AFUL224325
ABUT367737 ABU_0881


Organism features enriched in list (features available for 93 out of the 100 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.006119359
Arrangment:Singles 0.003301357286
Disease:Pharyngitis 3.229e-788
Disease:bronchitis_and_pneumonitis 3.229e-788
Endospores:No 1.378e-858211
GC_Content_Range4:0-40 0.001902446213
GC_Content_Range4:60-100 0.00001298145
GC_Content_Range7:0-30 0.00001631947
GC_Content_Range7:40-50 0.004142428117
GC_Content_Range7:60-70 0.00006978134
Genome_Size_Range5:0-2 2.720e-1861155
Genome_Size_Range5:4-6 3.588e-115184
Genome_Size_Range9:0-1 1.162e-61527
Genome_Size_Range9:1-2 6.915e-1146128
Genome_Size_Range9:4-5 0.0000988496
Genome_Size_Range9:5-6 1.141e-6188
Gram_Stain:Gram_Neg 0.000250938333
Gram_Stain:Gram_Pos 2.521e-76150
Habitat:Aquatic 0.00219072491
Habitat:Multiple 0.000039713178
Habitat:Specialized 0.00003132053
Optimal_temp.:- 0.000098925257
Optimal_temp.:100 0.003949533
Optimal_temp.:35-40 0.003949533
Optimal_temp.:37 0.000376729106
Optimal_temp.:85 0.000612944
Oxygen_Req:Aerobic 0.000122415185
Oxygen_Req:Anaerobic 5.396e-1039102
Oxygen_Req:Facultative 0.001326720201
Pathogenic_in:Human 0.001594922213
Salinity:Extreme_halophilic 0.001421357
Shape:Irregular_coccus 7.477e-151717
Shape:Rod 2.982e-1028347
Shape:Sphere 8.593e-101519
Temp._range:Hyperthermophilic 3.165e-101723
Temp._range:Mesophilic 0.000122262473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 5
Effective number of orgs (counting one per cluster within 468 clusters): 5

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BQUI283165 ncbi Bartonella quintana Toulouse 0.00508187176
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00512467186
BHEN283166 ncbi Bartonella henselae Houston-1 0.00870127846
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.00924957926
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 13129 0.00960667976


Names of the homologs of the genes in the group in each of these orgs
  G6364   G6363   G6362   G6361   EG11734   EG10168   
BQUI283165 BQ02140BQ02130BQ02120BQ02110BQ02130BQ02100
BBAC360095 BARBAKC583_1243BARBAKC583_1244BARBAKC583_1245BARBAKC583_1246BARBAKC583_1244BARBAKC583_1247
BHEN283166 BH02260BH02250BH02240BH02230BH02250BH02220
BTRI382640 BT_0250BT_0249BT_0248BT_0247BT_0249BT_0246
CDIP257309 DIP1448DIP1718DIP1717DIP1716DIP1718DIP1227


Organism features enriched in list (features available for 5 out of the 5 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Bacillary_angiomatosis 0.000058922
Disease:Bartinellosis 0.008576311
Disease:Carrion's_disease 0.008576311
Disease:Cat_scratch_fever 0.008576311
Disease:Diphtheria 0.008576311
Disease:Oroya_fever 0.008576311
Disease:Trench_fever 0.008576311
Endospores:No 0.00602295211
Oxygen_Req:Aerobic 0.00309975185
Pathogenic_in:Rat 0.008576311



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462130.6511
PWY-4041 (γ-glutamyl cycle)2792300.6510
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392530.6187
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912240.5742
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962260.5716
P344-PWY (acrylonitrile degradation)2101810.5691
PWY-5148 (acyl-CoA hydrolysis)2271900.5665
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951720.5660
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002260.5594
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902210.5580
PWY-5918 (heme biosynthesis I)2722110.5505
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292370.5441
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862160.5382
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491390.5273
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831590.5237
TYRFUMCAT-PWY (tyrosine degradation I)1841590.5196
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222710.5180
PWY-5340 (sulfate activation for sulfonation)3852560.5128
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181770.5120
PWY-1269 (CMP-KDO biosynthesis I)3252290.5041
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652460.5011
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251790.5001
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911600.4984
PWY-5028 (histidine degradation II)1301220.4887
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982570.4850
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112190.4811
VALDEG-PWY (valine degradation I)2902090.4806
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002130.4756
PWY-5913 (TCA cycle variation IV)3012130.4726
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491870.4698
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491870.4698
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262240.4690
GLUCONSUPER-PWY (D-gluconate degradation)2291760.4658
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892060.4643
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482330.4639
AST-PWY (arginine degradation II (AST pathway))1201120.4598
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162600.4580
PROSYN-PWY (proline biosynthesis I)4752800.4512
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742420.4502
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551870.4498
PWY-5938 ((R)-acetoin biosynthesis I)3762420.4447
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911520.4426
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381210.4417
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351190.4404
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582720.4343
PWY0-501 (lipoate biosynthesis and incorporation I)3852440.4333
GLYOXYLATE-BYPASS (glyoxylate cycle)1691380.4315
FAO-PWY (fatty acid β-oxidation I)4572710.4296
PWY-6389 ((S)-acetoin biosynthesis)3682360.4274
PWY-6087 (4-chlorocatechol degradation)2231670.4267
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96920.4232
DAPLYSINESYN-PWY (lysine biosynthesis I)3422240.4227
PANTO-PWY (pantothenate biosynthesis I)4722750.4210
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832410.4189
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121600.4188
PWY-46 (putrescine biosynthesis III)1381180.4184
PWY-561 (superpathway of glyoxylate cycle)1621320.4172
PWY-5386 (methylglyoxal degradation I)3052060.4154
PWY0-1337 (oleate β-oxidation)1991520.4120
P601-PWY (D-camphor degradation)95900.4112
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121010.4111
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761390.4100
CATECHOL-ORTHO-CLEAVAGE-PWY (catechol degradation to β-ketoadipate)103950.4091
PWY-5041 (S-adenosyl-L-methionine cycle II)1571280.4090
PWY-3162 (tryptophan degradation V (side chain pathway))94890.4082



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6363   G6362   G6361   EG11734   EG10168   
G63640.9998860.9998630.9997360.9998140.999745
G63630.9999930.99990.999990.999792
G63620.9999310.9999640.999836
G63610.9997390.999895
EG117340.999699
EG10168



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PAIRWISE BLAST SCORES:

  G6364   G6363   G6362   G6361   EG11734   EG10168   
G63640.0f0-----
G6363-0.0f0----
G6362--0.0f0---
G6361---0.0f0--
EG11734-6.2e-42--0.0f0-
EG10168-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10168 G6361 G6362 G6363 G6364 (centered at G6362)
EG11734 (centered at EG11734)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6364   G6363   G6362   G6361   EG11734   EG10168   
418/623411/623417/623371/623366/623367/623
AAEO224324:0:Tyes0750751-750372
AAUR290340:2:Tyes-210--
AAVE397945:0:Tyes033083309325333083252
ABAC204669:0:Tyes01680-16771680475
ABAU360910:0:Tyes012314
ABOR393595:0:Tyes012316
ABUT367737:0:Tyes--0---
ACAU438753:0:Tyes0-2-14
ACEL351607:0:Tyes698012-420
ACRY349163:8:Tyes13351336-133813360
ADEH290397:0:Tyes03733711502373369
AEHR187272:0:Tyes012314
AFER243159:0:Tyes432130
AHYD196024:0:Tyes012314
ALAI441768:0:Tyes--400--
AMAR234826:0:Tyes0-626---
AMAR329726:9:Tyes3202-0-2644353
AMET293826:0:Tyes11761654165201654-
ANAE240017:0:Tyes0128-130-322
AORE350688:0:Tyes8725655670565-
APHA212042:0:Tyes0-375---
APLE416269:0:Tyes1003036848047
APLE434271:0:Tno986033351050
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