CANDIDATE ID: 165

CANDIDATE ID: 165

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9963247e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11198 (glmU) (b3730)
   Products of gene:
     - NAG1P-URIDYLTRANS-MONOMER (GlmU)
     - NAG1P-URIDYLTRANS-CPLX (fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase)
       Reactions:
        N-acetyl-glucosamine-1-phosphate + UTP + H+  ->  UDP-alpha-N-acetyl-D-glucosamine + diphosphate
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         UDPNACETYLGALSYN-PWY (UDPNACETYLGALSYN-PWY)
         PWY-5514 (PWY-5514)
         UDPNAGSYN-PWY (UDP-N-acetyl-D-glucosamine biosynthesis I)
        D-glucosamine 1-phosphate + acetyl-CoA  ->  N-acetyl-glucosamine-1-phosphate + coenzyme A + H+
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         UDPNAGSYN-PWY (UDP-N-acetyl-D-glucosamine biosynthesis I)

- EG10382 (glmS) (b3729)
   Products of gene:
     - L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
     - L-GLN-FRUCT-6-P-AMINOTRANS-CPLX (L-glutamine:D-fructose-6-phosphate aminotransferase)
       Reactions:
        D-fructose-6-phosphate + L-glutamine  ->  D-glucosamine-6-phosphate + L-glutamate
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         UDPNACETYLGALSYN-PWY (UDPNACETYLGALSYN-PWY)
         UDPNAGSYN-PWY (UDP-N-acetyl-D-glucosamine biosynthesis I)

- EG10104 (atpG) (b3733)
   Products of gene:
     - ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
     - F-1-CPLX (ATP synthase, F1 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10102 (atpE) (b3737)
   Products of gene:
     - ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
     - ATPE-CPLX (c subunit complex)
     - F-O-CPLX (ATP synthase, F0 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10101 (atpD) (b3732)
   Products of gene:
     - ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
     - ATPD-CPLX (β subunit complex)
     - F-1-CPLX (ATP synthase, F1 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10100 (atpC) (b3731)
   Products of gene:
     - ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
     - F-1-CPLX (ATP synthase, F1 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)



Back to top


ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 211
Effective number of orgs (counting one per cluster within 468 clusters): 140

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-36
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)5
SSP321327 ncbi Synechococcus sp. JA-3-3Ab5
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SLOI323850 ncbi Shewanella loihica PV-46
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RMET266264 ncbi Ralstonia metallidurans CH345
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251966
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
MXAN246197 ncbi Myxococcus xanthus DK 16225
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP400668 ncbi Marinomonas sp. MWYL16
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAR394221 ncbi Maricaulis maris MCS105
MFLA265072 ncbi Methylobacillus flagellatus KT6
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LCHO395495 ncbi Leptothrix cholodnii SP-66
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL16
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GURA351605 ncbi Geobacter uraniireducens Rf45
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough5
DRED349161 ncbi Desulfotomaculum reducens MI-15
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G205
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA6
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)6
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBLO203907 ncbi Candidatus Blochmannia floridanus5
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHA271848 ncbi Burkholderia thailandensis E2646
BSP36773 Burkholderia sp.6
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BCIC186490 Candidatus Baumannia cicadellinicola6
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1005
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)6
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  EG11198   EG10382   EG10104   EG10102   EG10101   EG10100   
YPSE349747 YPSIP31758_4174YPSIP31758_4173YPSIP31758_4177YPSIP31758_4181YPSIP31758_4176YPSIP31758_4175
YPSE273123 YPTB3965YPTB3964YPTB3968YPTB3972YPTB3967YPTB3966
YPES386656 YPDSF_3916YPDSF_3917YPDSF_3913YPDSF_3909YPDSF_3914YPDSF_3915
YPES377628 YPN_3976YPN_3975YPN_3979YPN_3983YPN_3978YPN_3977
YPES360102 YPA_4164YPA_4163YPA_4167YPA_4171YPA_4166YPA_4165
YPES349746 YPANGOLA_A4200YPANGOLA_A4199YPANGOLA_A4203YPANGOLA_A4207YPANGOLA_A4202YPANGOLA_A4201
YPES214092 YPO4119YPO4118YPO4122YPO4126YPO4121YPO4120
YPES187410 Y4133Y4132Y4136Y4140Y4135Y4134
YENT393305 YE4204YE4203YE4207YE4211YE4206YE4205
XORY360094 XOOORF_4676XOOORF_4666XOOORF_4682XOOORF_4686XOOORF_4681XOOORF_4680
XORY342109 XOO0673XOO0678XOO0667XOO0663XOO0668XOO0669
XORY291331 XOO0736XOO0746XOO0731XOO0727XOO0732XOO0733
XFAS405440 XFASM12_0482XFASM12_0118XFASM12_0486XFASM12_0490XFASM12_0485XFASM12_0484
XFAS183190 PD_0425PD_0110PD_0429PD_0433PD_0428PD_0427
XFAS160492 XF1140XF0141XF1144XF1148XF1143XF1142
XCAM487884 XCC-B100_3790XCC-B100_3781XCC-B100_3795XCC-B100_3799XCC-B100_3794XCC-B100_3793
XCAM316273 XCAORF_0710XCAORF_0719XCAORF_0705XCAORF_0701XCAORF_0706XCAORF_0707
XCAM314565 XC_3674XC_3663XC_3679XC_3683XC_3678XC_3677
XCAM190485 XCC0558XCC0569XCC0553XCC0549XCC0554XCC0555
XAXO190486 XAC3644XAC3637XAC3650XAC3654XAC3649XAC3648
VVUL216895 VV1_1023VV1_0641VV1_1020VV1_1016VV1_1021VV1_1022
VVUL196600 VV3249VV0502VV3252VV3256VV3251VV3250
VPAR223926 VP3067VP0359VP3070VP3074VP3069VP3068
VFIS312309 VF2562VF2372VF2565VF2569VF2564VF2563
VEIS391735 VEIS_1504VEIS_2759VEIS_0479VEIS_0475VEIS_0480VEIS_0481
VCHO345073 VC0395_A2530VC0395_A0039VC0395_A2527VC0395_A2523VC0395_A2528VC0395_A2529
VCHO VC2762VC0487VC2765VC2769VC2764VC2763
TTUR377629 TERTU_4348TERTU_4354TERTU_4717TERTU_4721TERTU_4716TERTU_4715
TDEN292415 TBD_2794TBD_2793TBD_2798TBD_2802TBD_2797TBD_2796
TCRU317025 TCR_2163TCR_1692TCR_2166TCR_2165TCR_2164
STYP99287 STM3862STM3861STM3866STM3870STM3865STM3864
STHE292459 STH3240STH196STH90STH91STH92
SSP94122 SHEWANA3_4128SHEWANA3_4125SHEWANA3_4131SHEWANA3_4135SHEWANA3_4130SHEWANA3_4129
SSP321332 CYB_2635CYB_1089CYB_2672CYB_2502CYB_2222
SSP321327 CYA_1151CYA_1543CYA_2112CYA_0420CYA_1542
SSON300269 SSO_3889SSO_3890SSO_3886SSO_3882SSO_3887SSO_3888
SSED425104 SSED_4484SSED_4481SSED_4487SSED_4491SSED_4486SSED_4485
SPRO399741 SPRO_0010SPRO_0011SPRO_0007SPRO_0003SPRO_0008SPRO_0009
SPEA398579 SPEA_4237SPEA_4234SPEA_4241SPEA_4245SPEA_4240SPEA_4239
SONE211586 SO_4745SO_4741SO_4748SO_4752SO_4747SO_4746
SLOI323850 SHEW_3842SHEW_3839SHEW_3846SHEW_3850SHEW_3845SHEW_3844
SHIGELLA GLMUGLMSATPGATPEATPDATPC
SHAL458817 SHAL_4288SHAL_4285SHAL_4295SHAL_4299SHAL_4294SHAL_4293
SGLO343509 SG2416SG2417SG2413SG2409SG2414SG2415
SFLE373384 SFV_3756SFV_3755SFV_3759SFV_3763SFV_3758SFV_3757
SFLE198214 AAN45250.1AAN45249.1AAN45253.1AAN45257.1AAN45252.1AAN45251.1
SENT454169 SEHA_C4193SEHA_C4192SEHA_C4197SEHA_C4201SEHA_C4196SEHA_C4195
SENT321314 SCH_3775SCH_3774SCH_3778SCH_3782SCH_3777SCH_3776
SENT295319 SPA3701SPA3700SPA3705SPA3709SPA3704SPA3703
SENT220341 STY3916STY3917STY3912STY3908STY3913STY3914
SENT209261 T3657T3658T3653T3649T3654T3655
SDYS300267 SDY_4018SDY_4019SDY_4015SDY_4011SDY_4016SDY_4017
SDEN318161 SDEN_3748SDEN_3743SDEN_3753SDEN_3757SDEN_3752SDEN_3751
SDEG203122 SDE_3959SDE_3948SDE_3967SDE_3971SDE_3966SDE_3965
SBOY300268 SBO_3757SBO_3758SBO_3754SBO_3750SBO_3755SBO_3756
SBAL402882 SHEW185_4363SHEW185_4360SHEW185_4366SHEW185_4370SHEW185_4365SHEW185_4364
SBAL399599 SBAL195_4505SBAL195_4502SBAL195_4508SBAL195_4512SBAL195_4507SBAL195_4506
RSOL267608 RSC0177RSC0178RSC3318RSC3317RSC3316
RMET266264 RMET_0186RMET_0187RMET_3495RMET_3494RMET_3493
RFER338969 RFER_1083RFER_1074RFER_0107RFER_0111RFER_0106RFER_0105
REUT381666 H16_A0262H16_A0263H16_A3638H16_A3637H16_A3636
REUT264198 REUT_A0229REUT_A0230REUT_A3347REUT_A3346REUT_A3345
PTHE370438 PTH_0104PTH_0539PTH_2813PTH_2812PTH_2811
PSYR223283 PSPTO_5597PSPTO_5595PSPTO_5600PSPTO_5604PSPTO_5599PSPTO_5598
PSYR205918 PSYR_5119PSYR_5117PSYR_5122PSYR_5126PSYR_5121PSYR_5120
PSTU379731 PST_4189PST_4186PST_4192PST_4196PST_4191PST_4190
PSP56811 PSYCPRWF_2281PSYCPRWF_2280PSYCPRWF_0192PSYCPRWF_0188PSYCPRWF_0193PSYCPRWF_0194
PSP312153 PNUC_1992PNUC_1991PNUC_0025PNUC_0026PNUC_0027
PSP296591 BPRO_0671BPRO_0675BPRO_0326BPRO_0322BPRO_0327BPRO_0328
PPUT76869 PPUTGB1_5429PPUTGB1_5427PPUTGB1_5432PPUTGB1_5436PPUTGB1_5431PPUTGB1_5430
PPUT351746 PPUT_5293PPUT_5291PPUT_5296PPUT_5300PPUT_5295PPUT_5294
PPUT160488 PP_5411PP_5409PP_5414PP_5418PP_5413PP_5412
PPRO298386 PBPRA3601PBPRA3599PBPRA3605PBPRB0131PBPRB0136PBPRA3603
PNAP365044 PNAP_0533PNAP_0536PNAP_0254PNAP_0250PNAP_0255PNAP_0256
PMUL272843 PM1806PM1731PM1493PM1489PM1494PM1495
PMEN399739 PMEN_4605PMEN_4602PMEN_4608PMEN_4612PMEN_4607PMEN_4606
PLUM243265 PLU0038PLU0037PLU0041PLU0045PLU0040PLU0039
PING357804 PING_3204PING_0085PING_3731PING_3735PING_3730PING_3729
PHAL326442 PSHAA3006PSHAA2994PSHAA3009PSHAA3013PSHAA3008PSHAA3007
PFLU220664 PFL_6214PFL_6212PFL_6217PFL_6221PFL_6216PFL_6215
PFLU216595 PFLU6116PFLU6114PFLU6119PFLU6123PFLU6118PFLU6117
PFLU205922 PFL_5728PFL_5726PFL_5731PFL_5735PFL_5730PFL_5729
PENT384676 PSEEN5540PSEEN5537PSEEN5543PSEEN5547PSEEN5542PSEEN5541
PCRY335284 PCRYO_2396PCRYO_2397PCRYO_2328PCRYO_2332PCRYO_2327PCRYO_2326
PCAR338963 PCAR_2934PCAR_2933PCAR_3132PCAR_3131PCAR_3130
PATL342610 PATL_3879PATL_3881PATL_4296PATL_4300PATL_4295PATL_4294
PARC259536 PSYC_2073PSYC_2074PSYC_2025PSYC_2029PSYC_2024PSYC_2023
PAER208964 PA5552PA5549PA5555PA5559PA5554PA5553
PAER208963 PA14_73220PA14_73170PA14_73250PA14_73300PA14_73240PA14_73230
NOCE323261 NOC_3072NOC_3071NOC_3075NOC_3079NOC_3074NOC_3073
NMUL323848 NMUL_A0312NMUL_A0313NMUL_A0309NMUL_A0305NMUL_A0310NMUL_A0311
NMEN374833 NMCC_0039NMCC_0032NMCC_0283NMCC_0284NMCC_0285
NMEN272831 NMC0015NMC0008NMC1907NMC1906NMC1905
NMEN122587 NMA0284NMA0276NMA0518NMA0519NMA0520
NMEN122586 NMB_0038NMB_0031NMB_1935NMB_1934NMB_1933
NGON242231 NGO2053NGO2045NGO2149NGO2150NGO2151
NEUT335283 NEUT_0279NEUT_0280NEUT_0276NEUT_0272NEUT_0277NEUT_0278
NEUR228410 NE0208NE0209NE0205NE0201NE0206NE0207
MXAN246197 MXAN_1385MXAN_1386MXAN_6925MXAN_6923MXAN_6921
MTHE264732 MOTH_0075MOTH_2245MOTH_2379MOTH_2378MOTH_2377
MSUC221988 MS1949MS0189MS2347MS2351MS2346MS2345
MSP400668 MMWYL1_0771MMWYL1_0772MMWYL1_4463MMWYL1_4467MMWYL1_4462MMWYL1_4461
MPET420662 MPE_A0557MPE_A0560MPE_A0196MPE_A0192MPE_A0197MPE_A0198
MMAR394221 MMAR10_0970MMAR10_2453MMAR10_2803MMAR10_2802MMAR10_2800
MFLA265072 MFLA_2742MFLA_2741MFLA_2745MFLA_2749MFLA_2744MFLA_2743
MCAP243233 MCA_0014MCA_0015MCA_0011MCA_0007MCA_0012MCA_0013
MAQU351348 MAQU_3873MAQU_3872MAQU_3876MAQU_3880MAQU_3875MAQU_3874
LPNE400673 LPC_3161LPC_3120LPC_3298LPC_3302LPC_3297LPC_3296
LPNE297246 LPP2934LPP2893LPP3054LPP3058LPP3053LPP3052
LPNE297245 LPL2788LPL2748LPL2911LPL2915LPL2910LPL2909
LPNE272624 LPG2875LPG2836LPG2983LPG2987LPG2982LPG2981
LCHO395495 LCHO_0098LCHO_0095LCHO_3527LCHO_3531LCHO_3526LCHO_3525
KPNE272620 GKPORF_B3476GKPORF_B3475GKPORF_B3480GKPORF_B3484GKPORF_B3479GKPORF_B3478
JSP375286 MMA_3441MMA_3443MMA_3628MMA_3632MMA_3627MMA_3626
ILOI283942 IL2617IL2616IL2620IL2624IL2619IL2618
HSOM228400 HSM_0204HSM_0568HSM_1851HSM_1855HSM_1850HSM_1849
HSOM205914 HS_0333HS_1536HS_1697HS_1701HS_1696HS_1695
HMOD498761 HM1_0728HM1_1526HM1_1103HM1_1104HM1_1105
HINF71421 HI_0642HI_0429HI_0480HI_0484HI_0479HI_0478
HINF374930 CGSHIEE_09010CGSHIEE_00845CGSHIEE_00585CGSHIEE_00565CGSHIEE_00590CGSHIEE_00595
HINF281310 NTHI0762NTHI0553NTHI0610NTHI0614NTHI0609NTHI0608
HHAL349124 HHAL_2428HHAL_2426HHAL_2431HHAL_2435HHAL_2430HHAL_2429
HDUC233412 HD_1511HD_1894HD_0009HD_0005HD_0010HD_0011
HCHE349521 HCH_07069HCH_07068HCH_07072HCH_07077HCH_07071HCH_07070
HARS204773 HEAR3196HEAR3199HEAR3406HEAR3410HEAR3405HEAR3404
GVIO251221 GLR0443GLL2215GLR4315GLL2570GLL2568
GURA351605 GURA_0122GURA_0121GURA_4262GURA_4263GURA_4264
FTUL458234 FTA_0480FTA_0481FTA_1903FTA_1902FTA_1901
FTUL418136 FTW_1687FTW_1686FTW_0139FTW_0140FTW_0141
FTUL401614 FTN_0484FTN_0485FTN_1647FTN_1646FTN_1645
FTUL393115 FTF0387FTF0388FTF0063FTF0064FTF0065
FTUL393011 FTH_0450FTH_0451FTH_1733FTH_1732FTH_1731
FTUL351581 FTL_0453FTL_0454FTL_1796FTL_1795FTL_1794
FRANT GLMUGLMSATPGATPDATPC
FPHI484022 FPHI_0366FPHI_0365FPHI_0961FPHI_0962FPHI_0963
ESP42895 ENT638_4135ENT638_4136ENT638_4131ENT638_4127ENT638_4132ENT638_4133
EFER585054 EFER_4028EFER_4027EFER_4032EFER_4036EFER_4031EFER_4030
ECOO157 GLMUGLMSATPGATPEATPDATPC
ECOL83334 ECS4672ECS4671ECS4675ECS4679ECS4674ECS4673
ECOL585397 ECED1_4420ECED1_4419ECED1_4423ECED1_4427ECED1_4422ECED1_4421
ECOL585057 ECIAI39_4334ECIAI39_4333ECIAI39_4337ECIAI39_4341ECIAI39_4336ECIAI39_4335
ECOL585056 ECUMN_4260ECUMN_4259ECUMN_4263ECUMN_4267ECUMN_4262ECUMN_4261
ECOL585055 EC55989_4205EC55989_4204EC55989_4208EC55989_4212EC55989_4207EC55989_4206
ECOL585035 ECS88_4152ECS88_4151ECS88_4155ECS88_4159ECS88_4154ECS88_4153
ECOL585034 ECIAI1_3914ECIAI1_3913ECIAI1_3917ECIAI1_3921ECIAI1_3916ECIAI1_3915
ECOL481805 ECOLC_4264ECOLC_4265ECOLC_4261ECOLC_4257ECOLC_4262ECOLC_4263
ECOL469008 ECBD_4302ECBD_4303ECBD_4299ECBD_4295ECBD_4300ECBD_4301
ECOL439855 ECSMS35_4098ECSMS35_4097ECSMS35_4101ECSMS35_4105ECSMS35_4100ECSMS35_4099
ECOL413997 ECB_03614ECB_03613ECB_03617ECB_03621ECB_03616ECB_03615
ECOL409438 ECSE_4020ECSE_4019ECSE_4023ECSE_4027ECSE_4022ECSE_4021
ECOL364106 UTI89_C4282UTI89_C4281UTI89_C4286UTI89_C4292UTI89_C4285UTI89_C4284
ECOL362663 ECP_3929ECP_3928ECP_3932ECP_3936ECP_3931ECP_3930
ECOL331111 ECE24377A_4245ECE24377A_4244ECE24377A_4249ECE24377A_4253ECE24377A_4247ECE24377A_4246
ECOL316407 ECK3723:JW3708:B3730ECK3722:JW3707:B3729ECK3726:JW3711:B3733ECK3730:JW3715:B3737ECK3725:JW3710:B3732ECK3724:JW3709:B3731
ECOL199310 C4655C4654C4659C4665C4658C4657
ECAR218491 ECA4509ECA4508ECA4513ECA4517ECA4512ECA4511
DVUL882 DVU_2668DVU_3156DVU_0776DVU_0775DVU_0774
DRED349161 DRED_0099DRED_0295DRED_3151DRED_3150DRED_3149
DNOD246195 DNO_1140DNO_0528DNO_1143DNO_1147DNO_1142DNO_1141
DHAF138119 DSY0152DSY4485DSY4913DSY4912DSY4911
DDES207559 DDE_0981DDE_0502DDE_0986DDE_0985DDE_0984
DARO159087 DARO_0220DARO_3931DARO_4113DARO_4109DARO_4114DARO_4115
CVIO243365 CV_0674CV_0677CV_0671CV_0667CV_0672CV_0673
CVES412965 COSY_0932COSY_0809COSY_0946COSY_0950COSY_0945COSY_0944
CSAL290398 CSAL_3282CSAL_3280CSAL_3285CSAL_3289CSAL_3284CSAL_3283
CRUT413404 RMAG_1030RMAG_0883RMAG_1046RMAG_1050RMAG_1045RMAG_1044
CPSY167879 CPS_4944CPS_4942CPS_0061CPS_0057CPS_0062CPS_0063
CJAP155077 CJA_3806CJA_3802CJA_3810CJA_3814CJA_3809CJA_3808
CHYD246194 CHY_0192CHY_2010CHY_2546CHY_2545CHY_2544
CDES477974 DAUD_0068DAUD_0360DAUD_2138DAUD_2137DAUD_2136
CBUR434922 COXBU7E912_0173COXBU7E912_0013COXBU7E912_0177COXBU7E912_0181COXBU7E912_0176COXBU7E912_0174
CBUR360115 COXBURSA331_A2151COXBURSA331_A1985COXBURSA331_A2147COXBURSA331_A2143COXBURSA331_A2148COXBURSA331_A2150
CBUR227377 CBU_1947CBU_1787CBU_1944CBU_1940CBU_1945CBU_1946
CBLO291272 BPEN_010BPEN_007BPEN_003BPEN_008BPEN_009
CBLO203907 BFL010BFL007BFL003BFL008BFL009
BVIE269482 BCEP1808_3069BCEP1808_4660BCEP1808_0114BCEP1808_0110BCEP1808_0115BCEP1808_0116
BTHA271848 BTH_I0289BTH_I0288BTH_I3309BTH_I3313BTH_I3308BTH_I3307
BSP36773 BCEP18194_A6330BCEP18194_A4463BCEP18194_A3287BCEP18194_A3283BCEP18194_A3288BCEP18194_A3289
BSP107806 BU027BU026BU007BU003BU008BU009
BPSE320373 BURPS668_0324BURPS668_0323BURPS668_3969BURPS668_3973BURPS668_3968BURPS668_3967
BPSE320372 BURPS1710B_A0543BURPS1710B_A1655BURPS1710B_A0184BURPS1710B_A0188BURPS1710B_A0183BURPS1710B_A0182
BPSE272560 BPSL0313BPSL1312BPSL3397BPSL3401BPSL3396BPSL3395
BPET94624 BPET0181BPET0186BPET0341BPET0337BPET0342BPET0343
BPER257313 BP3730BP0666BP3287BP3283BP3288BP3289
BPAR257311 BPP4229BPP4214BPP4136BPP4140BPP4135BPP4134
BMAL320389 BMA10247_2243BMA10247_2242BMA10247_3014BMA10247_3010BMA10247_3015BMA10247_3016
BMAL320388 BMASAVP1_A3051BMASAVP1_A3050BMASAVP1_A3356BMASAVP1_A3360BMASAVP1_A3355BMASAVP1_A3354
BMAL243160 BMA_3380BMA_3379BMA_2956BMA_2952BMA_2957BMA_2958
BCIC186490 BCI_0139BCI_0138BCI_0142BCI_0146BCI_0141BCI_0140
BCEN331272 BCEN2424_2981BCEN2424_2982BCEN2424_0105BCEN2424_0101BCEN2424_0106BCEN2424_0107
BCEN331271 BCEN_2367BCEN_2368BCEN_2950BCEN_2954BCEN_2949BCEN_2948
BBRO257310 BB4817BB4802BB4606BB4610BB4605BB4604
BBAC264462 BD3425BD3424BD3898BD3897BD3896
BAPH198804 BUSG028BUSG027BUSG007BUSG003BUSG008BUSG009
BAMB398577 BAMMC406_2891BAMMC406_3994BAMMC406_0105BAMMC406_0101BAMMC406_0106BAMMC406_0107
BAMB339670 BAMB_3028BAMB_5481BAMB_0096BAMB_0092BAMB_0097BAMB_0098
ASP76114 EBA2245EBA2244EBA3006EBA3000EBA3007EBA3008
ASP62977 ACIAD3575ACIAD3576ACIAD0186ACIAD0182ACIAD0187ACIAD0188
ASP62928 AZO3637AZO3636AZO0158AZO0154AZO0159AZO0160
ASP232721 AJS_0636AJS_0641AJS_0307AJS_0303AJS_0308AJS_0309
ASAL382245 ASA_4348ASA_4342ASA_4351ASA_4355ASA_4350ASA_4349
APLE434271 APJL_0581APJL_1664APJL_1680APJL_1684APJL_1679APJL_1678
APLE416269 APL_0588APL_1631APL_1647APL_1651APL_1646APL_1645
AORE350688 CLOS_2646CLOS_2836CLOS_2561CLOS_2560CLOS_2559
AHYD196024 AHA_4260AHA_4254AHA_4263AHA_4267AHA_4262AHA_4261
AFER243159 AFE_3131AFE_3132AFE_3128AFE_3129AFE_3130
AEHR187272 MLG_2867MLG_2865MLG_2870MLG_2874MLG_2869MLG_2868
ADEH290397 ADEH_3958ADEH_3959ADEH_4349ADEH_4348ADEH_4347
ABOR393595 ABO_2724ABO_2723ABO_2727ABO_2731ABO_2726ABO_2725
ABAU360910 BAV3275BAV3270BAV3215BAV3219BAV3214BAV3213
AAVE397945 AAVE_4039AAVE_4036AAVE_0371AAVE_0367AAVE_0372AAVE_0373


Organism features enriched in list (features available for 201 out of the 211 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.529e-61392
Arrangment:Singles 0.0097067110286
Disease:Bubonic_plague 0.001598366
Disease:Dysentery 0.001598366
Disease:Gastroenteritis 0.00172641013
Disease:Tularemia 0.004713455
Endospores:No 4.600e-1236211
Endospores:Yes 0.0006473853
GC_Content_Range4:0-40 2.349e-1926213
GC_Content_Range4:40-60 3.432e-11114224
GC_Content_Range4:60-100 0.007034061145
GC_Content_Range7:0-30 0.0000179447
GC_Content_Range7:30-40 6.776e-1322166
GC_Content_Range7:50-60 1.196e-1066107
GC_Content_Range7:60-70 0.001505460134
Genome_Size_Range5:0-2 1.030e-1318155
Genome_Size_Range5:2-4 0.009692157197
Genome_Size_Range5:4-6 6.332e-13102184
Genome_Size_Range5:6-10 0.00628472447
Genome_Size_Range9:1-2 1.758e-1213128
Genome_Size_Range9:4-5 0.00004795096
Genome_Size_Range9:5-6 1.788e-75288
Genome_Size_Range9:6-8 0.00130052238
Gram_Stain:Gram_Neg 1.675e-30177333
Gram_Stain:Gram_Pos 3.334e-246150
Motility:No 1.046e-923151
Motility:Yes 4.570e-7120267
Optimal_temp.:- 0.0018476104257
Optimal_temp.:35-37 7.486e-71313
Optimal_temp.:37 0.005032626106
Oxygen_Req:Anaerobic 2.501e-616102
Oxygen_Req:Facultative 0.000030191201
Pathogenic_in:Animal 0.00473523266
Pathogenic_in:No 0.000704561226
Pathogenic_in:Plant 0.00183901115
Shape:Coccobacillus 0.0087786811
Shape:Coccus 1.673e-7982
Shape:Rod 1.445e-13160347
Shape:Spiral 0.0000620234
Temp._range:Hyperthermophilic 0.0006070123
Temp._range:Psychrophilic 0.001087889



Back to top


ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 126
Effective number of orgs (counting one per cluster within 468 clusters): 110

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SRUB309807 ncbi Salinibacter ruber DSM 138551
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT31
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1291
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G371
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
GFOR411154 ncbi Gramella forsetii KT08031
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  EG11198   EG10382   EG10104   EG10102   EG10101   EG10100   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX1436
TVOL273116
TPEN368408
TPAL243276 TP_0861
TKOD69014 TK0809
TDEN243275
TACI273075
STOK273063
SSOL273057
SRUB309807 SRU_1363
SMAR399550
SACI330779
RTYP257363 RT0788
RRIC452659 RRIOWA_1445
RRIC392021 A1G_06760
RPRO272947 RP801
RMAS416276 RMA_1252
RFEL315456 RF_1266
RCON272944 RC1235
RCAN293613 A1E_05105
RAKA293614 A1C_06190
PTOR263820
PRUM264731 GFRORF0891
PISL384616
PINT246198 PIN_A1423
PHOR70601 PH0243
PGIN242619
PFUR186497 PF0157
PDIS435591
PAST100379
PARS340102
PAER178306
PABY272844 PAB2201
OTSU357244
NSEN222891
NPHA348780
MTHE349307 MTHE_1680
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635 MYPU_2660
MPNE272634 MPN598
MPEN272633
MMYC272632 MSC_0885
MMOB267748
MMAZ192952 MM0300
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML0249
MLAB410358
MKAN190192 MK0127
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273 MG_399
MFLO265311
MCAP340047 MCAP_0084
MBUR259564 MBUR_2343
MBAR269797 MBAR_A2022
MART243272
MAEO419665
MACE188937 MA3023
MABS561007 MAB_1148C
LDEL390333 LDB0348
LDEL321956 LBUL_0303
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
GFOR411154 GFO_3547
FSUC59374 FSU1319
ERUM302409
ERUM254945
ECHA205920
ECAN269484
CTRA471473
CTRA471472
CSUL444179
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0100
CJEJ354242 CJJ81176_0142
CJEJ195099 CJE_0102
CJEJ192222 CJ0107
CFEL264202
CCAV227941
CABO218497
BXEN266265
BTUR314724
BLON206672 BL0964
BHER314723
BGAR290434
BFRA295405 BF2172
BFRA272559 BF2228
BBUR224326
BAPH372461
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557
ANAE240017
AMAR234826
ALAI441768 ACL_1036
AFUL224325
ABUT367737 ABU_1595


Organism features enriched in list (features available for 118 out of the 126 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00002218112
Disease:Pharyngitis 2.319e-688
Disease:Rocky_Mountain_Spotted_Fever 0.008123833
Disease:bronchitis_and_pneumonitis 2.319e-688
Endospores:No 5.710e-970211
GC_Content_Range4:0-40 0.000068061213
GC_Content_Range4:60-100 1.817e-611145
GC_Content_Range7:0-30 3.463e-92747
GC_Content_Range7:40-50 0.006356133117
GC_Content_Range7:50-60 0.003234912107
GC_Content_Range7:60-70 0.000015311134
Genome_Size_Range5:0-2 6.627e-2780155
Genome_Size_Range5:2-4 0.005029829197
Genome_Size_Range5:4-6 9.563e-138184
Genome_Size_Range5:6-10 0.0001942147
Genome_Size_Range9:0-1 7.756e-102027
Genome_Size_Range9:1-2 1.843e-1560128
Genome_Size_Range9:4-5 1.238e-6496
Genome_Size_Range9:5-6 7.175e-6488
Gram_Stain:Gram_Neg 0.005067956333
Gram_Stain:Gram_Pos 1.393e-106150
Habitat:Host-associated 0.000210558206
Habitat:Multiple 1.103e-714178
Habitat:Specialized 0.00035702153
Habitat:Terrestrial 0.0061454131
Motility:Yes 0.009540744267
Optimal_temp.:100 0.008123833
Optimal_temp.:35-40 0.008123833
Optimal_temp.:37 0.004711731106
Optimal_temp.:42 0.008123833
Optimal_temp.:85 0.001610844
Oxygen_Req:Aerobic 0.009726628185
Oxygen_Req:Anaerobic 5.080e-740102
Oxygen_Req:Facultative 0.000014222201
Pathogenic_in:Ruminant 0.008123833
Salinity:Extreme_halophilic 0.000349867
Shape:Irregular_coccus 1.692e-91517
Shape:Pleomorphic 0.001127068
Shape:Rod 2.646e-942347
Shape:Sphere 1.797e-91619
Temp._range:Hyperthermophilic 1.869e-81723
Temp._range:Mesophilic 0.000100481473



Back to top


ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 5
Effective number of orgs (counting one per cluster within 468 clusters): 5

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00213826216
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00253986396
BCIC186490 Candidatus Baumannia cicadellinicola 0.00353316756
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00575657326
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00693507556


Names of the homologs of the genes in the group in each of these orgs
  EG11198   EG10382   EG10104   EG10102   EG10101   EG10100   
BAPH198804 BUSG028BUSG027BUSG007BUSG003BUSG008BUSG009
BSP107806 BU027BU026BU007BU003BU008BU009
BCIC186490 BCI_0139BCI_0138BCI_0142BCI_0146BCI_0141BCI_0140
CVES412965 COSY_0932COSY_0809COSY_0946COSY_0950COSY_0945COSY_0944
CRUT413404 RMAG_1030RMAG_0883RMAG_1046RMAG_1050RMAG_1045RMAG_1044


Organism features enriched in list (features available for 4 out of the 5 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Genome_Size_Range5:0-2 0.00485504155
Genome_Size_Range9:0-1 0.0003414327



Back to top


ORGANISMS DEPLETED FOR GROUP:




Back to top


PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181710.6910
GLYCOCAT-PWY (glycogen degradation I)2461740.6292
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001910.6068
AST-PWY (arginine degradation II (AST pathway))1201080.5793
PWY-1269 (CMP-KDO biosynthesis I)3251930.5631
PWY-5918 (heme biosynthesis I)2721740.5599
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911790.5469
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901780.5425
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961800.5416
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861760.5386
PWY-5913 (TCA cycle variation IV)3011810.5366
PWY-4041 (γ-glutamyl cycle)2791730.5355
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481960.5337
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911370.5319
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391920.5256
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251500.5211
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761280.5152
PWY-5386 (methylglyoxal degradation I)3051780.5068
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951350.5044
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81760.4898
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831270.4842
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551540.4665
TYRFUMCAT-PWY (tyrosine degradation I)1841250.4660
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982000.4604
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291790.4591
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911270.4584
KDOSYN-PWY (KDO transfer to lipid IVA I)1801190.4343
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491050.4336
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791180.4300
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222020.4286
LIPASYN-PWY (phospholipases)2121310.4238
GLUCONSUPER-PWY (D-gluconate degradation)2291370.4181
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161980.4112
PWY-5340 (sulfate activation for sulfonation)3851890.4091
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491430.4062
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491430.4062
PWY0-1182 (trehalose degradation II (trehalase))70610.4005



Back to top


PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10382   EG10104   EG10102   EG10101   EG10100   
EG111980.9997460.999530.9994430.9995780.999591
EG103820.9993560.9993370.9993210.999387
EG101040.9997620.9999870.999983
EG101020.9997450.999723
EG101010.999998
EG10100



Back to top


PAIRWISE BLAST SCORES:

  EG11198   EG10382   EG10104   EG10102   EG10101   EG10100   
EG111980.0f0-----
EG10382-0.0f0----
EG10104--0.0f0---
EG10102---0.0f0--
EG10101----0.0f0-
EG10100-----0.0f0



Back to top


PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ATPSYN-CPLX (ATP synthase) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.667, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9994 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
             0.9997 0.9992 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
             0.9997 0.9992 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9998 0.9994 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
   *in cand* 0.9998 0.9993 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9997 0.9993 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
             0.9997 0.9993 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
             0.9997 0.9992 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
   *in cand* 0.9996 0.9994 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)

- DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I) (degree of match pw to cand: 0.118, degree of match cand to pw: 0.667, average score: 0.570)
  Genes in pathway or complex:
             0.2255 0.0665 EG11809 (purT) GARTRANSFORMYL2-MONOMER (phosphoribosylglycinamide formyltransferase 2)
             0.0440 0.0019 EG10798 (purM) AIRS-MONOMER (PurM)
             0.0821 0.0677 EG10797 (purL) FGAMSYN-MONOMER (phosphoribosylformylglycinamide synthetase)
             0.8067 0.7107 EG10792 (purD) GLYCRIBONUCSYN-MONOMER (phosphoribosylamine-glycine ligase)
             0.0017 0.0007 EG10794 (purF) PRPPAMIDOTRANS-MONOMER (PurF)
             0.9327 0.8558 EG10796 (purK) PURK-MONOMER (N5-carboxyaminoimidazole ribonucleotide synthetase monomer)
             0.9461 0.9080 EG10793 (purE) PURE-MONOMER (PurE)
             0.9618 0.8982 EG10795 (purH) AICARTRANSIMPCYCLO-CPLX (AICAR transformylase / IMP cyclohydrolase)
             0.2704 0.0007 EG10791 (purC) SAICARSYN-MONOMER (PurC)
             0.9527 0.8998 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
             0.1683 0.0037 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
             0.1421 0.0018 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
   *in cand* 0.9998 0.9994 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
             0.9997 0.9992 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
             0.9997 0.9992 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9998 0.9994 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
   *in cand* 0.9998 0.9993 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9997 0.9993 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
             0.9997 0.9993 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
             0.9997 0.9992 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.0394 0.0016 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.2616 0.1020 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.5124 0.3554 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.5826 0.3126 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.1587 0.0454 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.1595 0.0654 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.2941 0.0347 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.0215 0.0011 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.7641 0.4605 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.5026 0.2257 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.0402 0.0042 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.1147 0.0741 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.9830 0.9505 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7492 0.5178 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
   *in cand* 0.9996 0.9994 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)

- UDPNAGSYN-PWY (UDP-N-acetyl-D-glucosamine biosynthesis I) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.333, average score: 0.901)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9994 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)
   *in cand* 0.9995 0.9993 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
             0.6093 0.1402 EG11553 (glmM) PHOSGLUCOSAMINEMUT-MONOMER (phosphoglucosamine mutase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
   *in cand* 0.9998 0.9993 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9997 0.9993 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9998 0.9994 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)

- PWY-6126 (adenosine nucleotides de novo biosynthesis) (degree of match pw to cand: 0.182, degree of match cand to pw: 0.667, average score: 0.534)
  Genes in pathway or complex:
             0.7641 0.4605 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.0215 0.0011 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.2941 0.0347 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.1587 0.0454 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.1595 0.0654 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.5826 0.3126 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.2616 0.1020 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.5124 0.3554 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.0394 0.0016 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
   *in cand* 0.9998 0.9994 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
             0.9997 0.9992 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
             0.9997 0.9992 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9998 0.9994 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
   *in cand* 0.9998 0.9993 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9997 0.9993 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
             0.9997 0.9993 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
             0.9997 0.9992 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.5026 0.2257 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.0402 0.0042 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.1147 0.0741 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.9830 0.9505 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7492 0.5178 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
   *in cand* 0.9996 0.9994 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)

- OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli)) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.333, average score: 0.863)
  Genes in pathway or complex:
             0.4417 0.1276 EG11981 (glf) GALPMUT-MONOMER (UDP-galactopyranose mutase)
             0.8951 0.7937 EG11978 (rfbA) DTDPGLUCOSEPP-MONOMER (dTDP-glucose pyrophosphorylase)
             0.9262 0.8994 EG12412 (rfbB) DTDPGLUCDEHYDRAT-MONOMER (RmlB)
             0.7802 0.5976 EG12411 (rfbD) DTDPDEHYRHAMREDUCT-MONOMER (dTDP-4-dehydrorhamnose reductase)
             0.9062 0.8287 EG11979 (rfbC) DTDPDEHYDRHAMEPIM-MONOMER (dTDP-4-dehydrorhamnose 3,5-epimerase)
             0.6093 0.1402 EG11553 (glmM) PHOSGLUCOSAMINEMUT-MONOMER (phosphoglucosamine mutase)
   *in cand* 0.9995 0.9993 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
   *in cand* 0.9996 0.9994 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
   *in cand* 0.9998 0.9993 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9997 0.9993 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9998 0.9994 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)

- PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis) (degree of match pw to cand: 0.073, degree of match cand to pw: 0.667, average score: 0.550)
  Genes in pathway or complex:
             0.3278 0.1909 EG10449 (hisG) ATPPHOSRIBOSTRANS-MONOMER (HisG)
             0.5188 0.2683 EG10451 (hisI) HISTCYCLOPRATPPHOS (phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase)
             0.6440 0.1660 EG10444 (hisA) PRIBFAICARPISOM-MONOMER (N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase)
             0.8569 0.8251 EG10448 (hisF) CYCLASE-MONOMER (imidazole glycerol phosphate synthase, HisF subunit)
             0.7820 0.6438 EG10450 (hisH) GLUTAMIDOTRANS-MONOMER (imidazole glycerol phosphate synthase, HisH subunit)
             0.8563 0.5762 EG10445 (hisB) IMIDPHOSPHADEHYDHISTIDPHOSPHA-MONOMER (HisB)
             0.3103 0.1414 EG10446 (hisC) HISTPHOSTRANS-MONOMER (HisC)
             0.4392 0.1092 EG10447 (hisD) HISTDEHYD-MONOMER (HisD)
             0.7641 0.4605 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.0215 0.0011 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.2941 0.0347 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.1587 0.0454 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.1595 0.0654 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.5826 0.3126 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.2616 0.1020 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.5124 0.3554 EG20257 (nrdE) NRDE-MONOMER (NrdE)
   *in cand* 0.9998 0.9994 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
             0.9997 0.9992 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
             0.9997 0.9992 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9998 0.9994 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
   *in cand* 0.9998 0.9993 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9997 0.9993 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
             0.9997 0.9993 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
             0.9997 0.9992 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.1421 0.0018 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
             0.1683 0.0037 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
             0.9527 0.8998 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
             0.2704 0.0007 EG10791 (purC) SAICARSYN-MONOMER (PurC)
             0.9618 0.8982 EG10795 (purH) AICARTRANSIMPCYCLO-CPLX (AICAR transformylase / IMP cyclohydrolase)
             0.9461 0.9080 EG10793 (purE) PURE-MONOMER (PurE)
             0.9327 0.8558 EG10796 (purK) PURK-MONOMER (N5-carboxyaminoimidazole ribonucleotide synthetase monomer)
             0.0017 0.0007 EG10794 (purF) PRPPAMIDOTRANS-MONOMER (PurF)
             0.8067 0.7107 EG10792 (purD) GLYCRIBONUCSYN-MONOMER (phosphoribosylamine-glycine ligase)
             0.0821 0.0677 EG10797 (purL) FGAMSYN-MONOMER (phosphoribosylformylglycinamide synthetase)
             0.0440 0.0019 EG10798 (purM) AIRS-MONOMER (PurM)
             0.2255 0.0665 EG11809 (purT) GARTRANSFORMYL2-MONOMER (phosphoribosylglycinamide formyltransferase 2)
             0.0447 0.0017 EG11539 (pyrH) UMPKI-MONOMER (PyrH)
             0.6788 0.0364 EG10810 (pyrG) CTPSYN-MONOMER (PyrG)
             0.0394 0.0016 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.3489 0.1894 EG10134 (carA) CARBPSYN-SMALL (CarA)
             0.2464 0.1698 EG10135 (carB) CARBPSYN-LARGE (CarB)
             0.9231 0.8800 EG10811 (pyrI) ASPCARBREG-MONOMER (aspartate carbamoyltransferase, PyrI subunit)
             0.8353 0.7095 EG10805 (pyrB) ASPCARBCAT-MONOMER (aspartate carbamoyltransferase, PyrB subunit)
             0.3642 0.1167 EG10806 (pyrC) DIHYDROOROT-MONOMER (PyrC)
             0.9958 0.9945 EG10808 (pyrE) OROPRIBTRANS-MONOMER (PyrE)
             0.0578 0.0004 EG10809 (pyrF) OROTPDECARB-MONOMER (PyrF)
             0.0013 0.0000 EG10807 (pyrD) DIHYDROOROTOX-MONOMER (dihydroorotate dehydrogenase)
             0.5815 0.1279 EG10774 (prs) PRPPSYN-MONOMER (ribose-phosphate diphosphokinase)
             0.9222 0.8850 EG10723 (phnN) EG10723-MONOMER (ribose 1,5-bisphosphokinase)
             0.4548 0.0911 EG10220 (deoB) PPENTOMUT-MONOMER (phosphopentomutase)
             0.5026 0.2257 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.0402 0.0042 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.1147 0.0741 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.9830 0.9505 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7492 0.5178 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
   *in cand* 0.9996 0.9994 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)
   This pathway has holes

- F-1-CPLX (ATP synthase, F1 complex) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9993 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9998 0.9994 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.9997 0.9992 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
             0.9997 0.9992 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
   *in cand* 0.9998 0.9994 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9995 0.9993 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
   *in cand* 0.9996 0.9994 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)



Back to top


GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10100 EG10101 EG10104 EG10382 EG11198 (centered at EG10100)
EG10102 (centered at EG10102)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11198   EG10382   EG10104   EG10102   EG10101   EG10100   
402/623372/623400/623174/623419/623409/623
AAEO224324:0:Tyes0-1007---
AAUR290340:2:Tyes01513----
AAVE397945:0:Tyes360636034056
ABAC204669:0:Tyes71903365--3363
ABAU360910:0:Tyes62572610
ABOR393595:0:Tyes104832
ABUT367737:0:Tyes----0-
ACAU438753:0:Tyes-02434-24332432
ACEL351607:0:Tyes1294-0--2
ACRY349163:8:Tyes-6000-12
ADEH290397:0:Tyes01390-389388
AEHR187272:0:Tyes205943
AFER243159:0:Tyes340-12
AHYD196024:0:Tyes6091387
ALAI441768:0:Tyes0-----
AMAR329726:9:Tyes3939-0-43914390
AMET293826:0:Tyes04017189-190-
AORE350688:0:Tyes872752-10
APLE416269:0:Tyes010751096110010951094
APLE434271:0:Tno011151136114011351134
ASAL382245:5:Tyes6091387
ASP1667:3:Tyes017111401--1399
ASP232721:2:Tyes3273324056
ASP62928:0:Tyes354435434056
ASP62977:0:Tyes315231534056
ASP76114:2:Tyes10462458463464
AVAR240292:3:Tyes0-837-522521
BABO262698:0:Tno-0----
BABO262698:1:Tno----10
BAMB339670:2:Tno-0----
BAMB339670:3:Tno3013-4056
BAMB398577:2:Tno-0----
BAMB398577:3:Tno2831-4056
BAMY326423:0:Tyes0-3333--3331
BANT260799:0:Tno0-5172-51715170
BANT261594:2:Tno0-5082-50815080
BANT568206:2:Tyes0-5346-53455344
BANT592021:2:Tno0-5336-53355334
BAPH198804:0:Tyes25244056
BBAC264462:0:Tyes10438-437436
BBAC360095:0:Tyes-601--0-
BBRO257310:0:Tyes2141992610
BCAN483179:0:Tno-0----
BCAN483179:1:Tno--2-10
BCEN331271:2:Tno01595599594593
BCEN331272:3:Tyes287428754056
BCER226900:1:Tyes0-5145-51445143
BCER288681:0:Tno0-5034-50335032
BCER315749:1:Tyes0-3596-35953594
BCER405917:1:Tyes0-5111-51105109
BCER572264:1:Tno0-5181-51805179
BCIC186490:0:Tyes104832
BCLA66692:0:Tyes0-3835-38343833
BFRA272559:1:Tyes-----0
BFRA295405:0:Tno-----0
BHAL272558:0:Tyes0-3780-37793778
BHEN283166:0:Tyes-0--478-
BJAP224911:0:Fyes-1209--10
BLIC279010:0:Tyes0-3741-37403739
BLON206672:0:Tyes0-----
BMAL243160:1:Tno3903894056
BMAL320388:1:Tno20293297292291
BMAL320389:1:Tyes10759755760761
BMEL224914:0:Tno-0----
BMEL224914:1:Tno----01
BMEL359391:0:Tno-0----
BMEL359391:1:Tno----10
BOVI236:0:Tyes-0----
BOVI236:1:Tyes--2-10
BPAR257311:0:Tno90772610
BPER257313:0:Tyes278102369236523702371
BPET94624:0:Tyes05160156161162
BPSE272560:1:Tyes010063099310330983097
BPSE320372:1:Tno36014592610
BPSE320373:1:Tno203514351835133512
BPUM315750:0:Tyes0-3332-33313330
BQUI283165:0:Tyes-0--385-
BSP107806:2:Tyes24234056
BSP36773:2:Tyes310312074056
BSP376:0:Tyes-3171--01
BSUB:0:Tyes0-3857--3855
BSUI204722:0:Tyes-0----
BSUI204722:1:Tyes--2-10
BSUI470137:0:Tno-0660-659658
BTHA271848:1:Tno102957296129562955
BTHE226186:0:Tyes-0---164
BTHU281309:1:Tno0-4895-48944893
BTHU412694:1:Tno0-4620-46194618
BTRI382640:1:Tyes-0--714-
BVIE269482:6:Tyes-0----
BVIE269482:7:Tyes2927-4056
BWEI315730:4:Tyes0-5072-50715070
CACE272562:1:Tyes30890--27272726
CAULO:0:Tyes22160--33743372
CBEI290402:0:Tyes0165--335-
CBLO203907:0:Tyes7-4056
CBLO291272:0:Tno7-4056
CBOT36826:1:Tno33513216--01
CBOT441770:0:Tyes33103177--01
CBOT441771:0:Tno31733039--01
CBOT441772:1:Tno33883254--01
CBOT498213:1:Tno34043268--01
CBOT508765:1:Tyes0171--308-
CBOT515621:2:Tyes35503415--01
CBOT536232:0:Tno36593520--01
CBUR227377:1:Tyes1550152148153154
CBUR360115:1:Tno1630159155160162
CBUR434922:2:Tno1510155159154152
CCHL340177:0:Tyes-0140-2023-
CCON360104:2:Tyes--0-12
CCUR360105:0:Tyes--2-10
CDES477974:0:Tyes02912035-20342033
CDIF272563:1:Tyes345003403-3402-
CDIP257309:0:Tyes0794148--150
CEFF196164:0:Fyes01181301--303
CFET360106:0:Tyes--2-10
CGLU196627:0:Tyes01302268---
CHOM360107:1:Tyes--0-12
CHUT269798:0:Tyes-35970---
CHYD246194:0:Tyes017692279-22782277
CJAP155077:0:Tyes4081276
CJEI306537:0:Tyes1604080---
CJEJ192222:0:Tyes----0-
CJEJ195099:0:Tno----0-
CJEJ354242:2:Tyes----0-
CJEJ360109:0:Tyes----01
CJEJ407148:0:Tno----0-
CKLU431943:1:Tyes0155--34803479
CMIC31964:2:Tyes18610---1352
CMIC443906:2:Tyes11331440---0
CNOV386415:0:Tyes0139--18861885
CPEL335992:0:Tyes-9322-10
CPER195102:1:Tyes359179--10
CPER195103:0:Tno312152--10
CPER289380:3:Tyes290128--10
CPHY357809:0:Tyes----10
CPRO264201:0:Fyes-0369--367
CPSY167879:0:Tyes476047584056
CRUT413404:0:Tyes1440159163158157
CSAL290398:0:Tyes205943
CSP501479:7:Fyes--0-12
CSP501479:8:Fyes-0----
CSP78:2:Tyes-0--139137
CTEP194439:0:Tyes-01874-2075-
CTET212717:0:Tyes02166----
CVES412965:0:Tyes1160130134129128
CVIO243365:0:Tyes7104056
DARO159087:0:Tyes037403921391739223923
DDES207559:0:Tyes4860491-490489
DETH243164:0:Tyes--0-12
DGEO319795:1:Tyes19470----
DHAF138119:0:Tyes043854813-48124811
DNOD246195:0:Tyes5880591595590589
DOLE96561:0:Tyes--0-12
DPSY177439:2:Tyes-21320-12
DRAD243230:3:Tyes5030----
DRED349161:0:Tyes02083085-30843083
DSHI398580:5:Tyes-0--16601659
DSP216389:0:Tyes--0-12
DSP255470:0:Tno--0-12
DVUL882:1:Tyes188423702-10
ECAR218491:0:Tyes105943
ECOL199310:0:Tno1051143
ECOL316407:0:Tno784056
ECOL331111:6:Tno105943
ECOL362663:0:Tno104832
ECOL364106:1:Tno1051143
ECOL405955:2:Tyes104-3-
ECOL409438:6:Tyes104832
ECOL413997:0:Tno104832
ECOL439855:4:Tno104832
ECOL469008:0:Tno784056
ECOL481805:0:Tno784056
ECOL585034:0:Tno104832
ECOL585035:0:Tno104832
ECOL585055:0:Tno104832
ECOL585056:2:Tno104832
ECOL585057:0:Tno104832
ECOL585397:0:Tno104832
ECOL83334:0:Tno104832
ECOLI:0:Tno104832
ECOO157:0:Tno104832
EFAE226185:3:Tyes0-2390-2389-
EFER585054:1:Tyes105943
ELIT314225:0:Tyes-01290-12921293
ESP42895:1:Tyes894056
FALN326424:0:Tyes50430----
FJOH376686:0:Tyes-0238---
FMAG334413:1:Tyes0774----
FNOD381764:0:Tyes276520--0-
FNUC190304:0:Tyes0-497-496-
FPHI484022:1:Tyes10621-622623
FRANT:0:Tno3093100-12
FSP106370:0:Tyes333703082--3080
FSP1855:0:Tyes05165255---
FSUC59374:0:Tyes-0----
FTUL351581:0:Tno011188-11871186
FTUL393011:0:Tno011063-10621061
FTUL393115:0:Tyes3023030-12
FTUL401614:0:Tyes011154-11531152
FTUL418136:0:Tno129412930-12
FTUL458234:0:Tno011099-10981097
GBET391165:0:Tyes-0--818817
GFOR411154:0:Tyes-0----
GKAU235909:1:Tyes0-3420-34193418
GMET269799:1:Tyes-01921-19201919
GOXY290633:5:Tyes-0--1298-
GSUL243231:0:Tyes-1570-12
GTHE420246:1:Tyes0-3214-32133212
GURA351605:0:Tyes104120-41214122
GVIO251221:0:Tyes017953918-21542152
HACI382638:1:Tyes--0-1-
HARS204773:0:Tyes03200204199198
HAUR316274:2:Tyes427-0-12
HCHE349521:0:Tyes104832
HDUC233412:0:Tyes131816514056
HHAL349124:0:Tyes205943
HHEP235279:0:Tyes----01
HINF281310:0:Tyes198054585352
HINF374930:0:Tyes1484544056
HINF71421:0:Tno211052565150
HMOD498761:0:Tyes3776532-10
HNEP81032:0:Tyes-01094-10931092
HPY:0:Tno--1-0-
HPYL357544:1:Tyes--1-0-
HPYL85963:0:Tno--1-0-
HSOM205914:1:Tyes012001361136513601359
HSOM228400:0:Tno03731664166816631662
ILOI283942:0:Tyes104832
JSP290400:1:Tyes-21650-12
JSP375286:0:Tyes02190194189188
KPNE272620:2:Tyes105943
KRAD266940:2:Fyes2225510---
LACI272621:0:Tyes0-575---
LBIF355278:2:Tyes-0275-276-
LBIF456481:2:Tno-0281-282-
LBOR355276:1:Tyes-6642-10
LBOR355277:1:Tno-01227-12261225
LBRE387344:2:Tyes0--757-751
LCAS321967:1:Tyes--0--2
LCHO395495:0:Tyes303461346534603459
LDEL321956:0:Tyes0-----
LDEL390333:0:Tyes0-----
LGAS324831:0:Tyes0---987-
LHEL405566:0:Tyes0---508-
LINN272626:1:Tno0-2496--2494
LINT189518:1:Tyes-1034--10
LINT267671:1:Tno-0791-792793
LINT363253:3:Tyes396---01
LJOH257314:0:Tyes0---588-
LLAC272622:5:Tyes138-0---
LLAC272623:0:Tyes120-2--0
LMES203120:1:Tyes0-245-244-
LMON169963:0:Tno0-2400--2398
LMON265669:0:Tyes0-2273--2271
LPLA220668:0:Tyes0---16421641
LPNE272624:0:Tno380145149144143
LPNE297245:1:Fno400162166161160
LPNE297246:1:Fyes410162166161160
LPNE400673:0:Tno410178182177176
LREU557436:0:Tyes0---257-
LSAK314315:0:Tyes538---0-
LSPH444177:1:Tyes0-979--981
LWEL386043:0:Tyes0-2311--2309
LXYL281090:0:Tyes0216----
MABS561007:1:Tyes0-----
MACE188937:0:Tyes-0----
MAER449447:0:Tyes5921-4961-01
MAQU351348:2:Tyes104832
MAVI243243:0:Tyes03180366---
MBAR269797:1:Tyes-0----
MBOV233413:0:Tno02447299---
MBOV410289:0:Tno02439294---
MBUR259564:0:Tyes-0----
MCAP243233:0:Tyes784056
MCAP340047:0:Tyes----0-
MEXT419610:0:Tyes-2681--10
MFLA265072:0:Tyes104832
MGEN243273:0:Tyes----0-
MGIL350054:3:Tyes03012374---
MKAN190192:0:Tyes-0----
MLEP272631:0:Tyes0-----
MLOT266835:2:Tyes-0--25002499
MMAG342108:0:Tyes-0--28602859
MMAR394221:0:Tyes014821821-18201818
MMAZ192952:0:Tyes-0----
MMYC272632:0:Tyes----0-
MPET420662:1:Tyes3653684056
MPNE272634:0:Tyes----0-
MPUL272635:0:Tyes----0-
MSME246196:0:Tyes382403338---
MSP164756:1:Tno31300----
MSP164757:0:Tno34560----
MSP189918:2:Tyes31880----
MSP266779:3:Tyes-0--15131514
MSP400668:0:Tyes013761376537603759
MSP409:2:Tyes-0--10821081
MSUC221988:0:Tyes182002228223222272226
MTBCDC:0:Tno02611317---
MTBRV:0:Tno02440294---
MTHE264732:0:Tyes021182247-22462245
MTHE349307:0:Tyes-0----
MTUB336982:0:Tno02419300---
MTUB419947:0:Tyes02529300---
MVAN350058:0:Tyes327602824---
MXAN246197:0:Tyes015356-53545352
NARO279238:0:Tyes-01217-12181219
NEUR228410:0:Tyes784056
NEUT335283:2:Tyes784056
NFAR247156:2:Tyes3857-0--2
NGON242231:0:Tyes7093-9495
NHAM323097:2:Tyes-1455--10
NMEN122586:0:Tno701829-18281827
NMEN122587:0:Tyes70231-232233
NMEN272831:0:Tno701667-16661665
NMEN374833:0:Tno70244-245246
NMUL323848:3:Tyes784056
NOCE323261:1:Tyes104832
NSP103690:6:Tyes3952-0-50875086
NSP35761:1:Tyes130---868
NSP387092:0:Tyes--2-10
NWIN323098:0:Tyes-1094--01
OANT439375:4:Tyes-0----
OANT439375:5:Tyes--0-12
OCAR504832:0:Tyes-1622--01
OIHE221109:0:Tyes0-3005-30043003
PABY272844:0:Tyes-0----
PACN267747:0:Tyes01272----
PAER208963:0:Tyes3061054
PAER208964:0:Tno3061054
PARC259536:0:Tyes53542610
PATL342610:0:Tyes02423427422421
PCAR338963:0:Tyes10201-200199
PCRY335284:1:Tyes70712610
PENT384676:0:Tyes205943
PFLU205922:0:Tyes205943
PFLU216595:1:Tyes205943
PFLU220664:0:Tyes205943
PFUR186497:0:Tyes-0----
PHAL326442:1:Tyes70101498
PHOR70601:0:Tyes-0----
PING357804:0:Tyes293603450345434493448
PINT246198:1:Tyes-0----
PLUM243265:0:Fyes104832
PLUT319225:0:Tyes-571913-0-
PMAR146891:0:Tyes0-983--972
PMAR167539:0:Tyes0-562--551
PMAR167540:0:Tyes0-855--844
PMAR167542:0:Tyes0-977--966
PMAR167546:0:Tyes0-1008--997
PMAR167555:0:Tyes--9--0
PMAR59920:0:Tno0-948--939
PMAR74546:0:Tyes0-949--938
PMAR74547:0:Tyes0-1075--1061
PMAR93060:0:Tyes0-1038--1027
PMEN399739:0:Tyes3061054
PMOB403833:0:Tyes699---0-
PMUL272843:1:Tyes3172424056
PNAP365044:8:Tyes2862884056
PPEN278197:0:Tyes0--973968967
PPRO298386:1:Tyes---05-
PPRO298386:2:Tyes206--4
PPUT160488:0:Tno205943
PPUT351746:0:Tyes205943
PPUT76869:0:Tno205943
PRUM264731:0:Tyes-0----
PSP117:0:Tyes-1349--0-
PSP296591:2:Tyes3443484056
PSP312153:0:Tyes199819970-12
PSP56811:2:Tyes214221414056
PSTU379731:0:Tyes3061054
PSYR205918:0:Tyes205943
PSYR223283:2:Tyes205943
PTHE370438:0:Tyes04462757-27562755
RAKA293614:0:Fyes----0-
RALB246199:0:Tyes0151160-59-
RBEL336407:0:Tyes----01
RBEL391896:0:Fno----10
RCAN293613:0:Fyes----0-
RCAS383372:0:Tyes-067--65
RCON272944:0:Tno----0-
RDEN375451:4:Tyes-0212-211210
RETL347834:5:Tyes-0--17561755
REUT264198:3:Tyes013149-31483147
REUT381666:2:Tyes013281-32803279
RFEL315456:2:Tyes----0-
RFER338969:1:Tyes9789692610
RLEG216596:6:Tyes-02025-20242023
RMAS416276:1:Tyes----0-
RMET266264:2:Tyes013295-32943293
RPAL258594:0:Tyes-2499--10
RPAL316055:0:Tyes-2485--10
RPAL316056:0:Tyes-2434--10
RPAL316057:0:Tyes-2079--01
RPAL316058:0:Tyes-2613--10
RPOM246200:1:Tyes--2-10
RPRO272947:0:Tyes----0-
RRIC392021:0:Fno----0-
RRIC452659:0:Tyes----0-
RRUB269796:1:Tyes-17980-12
RSAL288705:0:Tyes1539282---0
RSOL267608:1:Tyes013205-32043203
RSP101510:3:Fyes424346962--0
RSP357808:0:Tyes-35202--0
RSPH272943:4:Tyes-2120-12
RSPH349101:2:Tno-1910-12
RSPH349102:5:Tyes-0184-183182
RTYP257363:0:Tno----0-
RXYL266117:0:Tyes960----
SACI56780:0:Tyes--0-12
SAGA205921:0:Tno562-0-1-
SAGA208435:0:Tno658-0-1-
SAGA211110:0:Tyes705-0-1-
SALA317655:1:Tyes-0--938-
SARE391037:0:Tyes0-3186--3183
SAUR158878:1:Tno0-1665-16641663
SAUR158879:1:Tno0-1564-15631562
SAUR196620:0:Tno0-1639-16381637
SAUR273036:0:Tno0-1550-15491548
SAUR282458:0:Tno0-1680-16791678
SAUR282459:0:Tno0-1612-16111610
SAUR359786:1:Tno0-1661-16601659
SAUR359787:1:Tno0-1615-16141613
SAUR367830:3:Tno0-1518-15171516
SAUR418127:0:Tyes0-1655-16541653
SAUR426430:0:Tno0-1605-16041603
SAUR93061:0:Fno0-1822-18211820
SAUR93062:1:Tno0-1515-15141513
SAVE227882:1:Fyes68721232--0
SBAL399599:3:Tyes3061054
SBAL402882:1:Tno3061054
SBOY300268:1:Tyes784056
SCO:2:Fyes-0632---
SDEG203122:0:Tyes11019231817
SDEN318161:0:Tyes50101498
SDYS300267:1:Tyes784056
SELO269084:0:Tyes49-0-632631
SENT209261:0:Tno894056
SENT220341:0:Tno894056
SENT295319:0:Tno105943
SENT321314:2:Tno104832
SENT454169:2:Tno105943
SEPI176279:1:Tyes0-1544-15431542
SEPI176280:0:Tno607-2-10
SERY405948:0:Tyes0-5332---
SFLE198214:0:Tyes104832
SFLE373384:0:Tno104832
SFUM335543:0:Tyes-03-21
SGLO343509:3:Tyes784056
SGOR29390:0:Tyes0-74-73-
SHAE279808:0:Tyes1632-0--2
SHAL458817:0:Tyes30101498
SHIGELLA:0:Tno784056
SLAC55218:1:Fyes-1360--01
SLOI323850:0:Tyes3071165
SMED366394:3:Tyes-0--15011500
SMEL266834:0:Tyes-0----
SMEL266834:2:Tyes----10
SMUT210007:0:Tyes97-1-0-
SONE211586:1:Tyes4071165
SPEA398579:0:Tno3071165
SPNE1313:0:Tyes0-462-461-
SPNE170187:0:Tyes861---0-
SPNE171101:0:Tno0-472-471-
SPNE487213:0:Tno0-219-218-
SPNE487214:0:Tno0-511-510-
SPNE488221:0:Tno0-486-485-
SPRO399741:1:Tyes784056
SPYO160490:0:Tno0-241--243
SPYO186103:0:Tno0-272--274
SPYO193567:0:Tno192-2--0
SPYO198466:0:Tno0-186--188
SPYO286636:0:Tno0-212--214
SPYO293653:0:Tno0-219--221
SPYO319701:0:Tyes0-208--210
SPYO370551:0:Tno0-270--272
SPYO370552:0:Tno--0-12
SPYO370553:0:Tno0-262--264
SPYO370554:0:Tyes0-301--303
SRUB309807:1:Tyes-0----
SSAP342451:2:Tyes1529-0---
SSED425104:0:Tyes3061054
SSON300269:1:Tyes784056
SSP1131:0:Tyes0-1053--1038
SSP1148:0:Tyes2771-0-1369-
SSP292414:2:Tyes-01385-13841383
SSP321327:0:Tyes69510641613-01062
SSP321332:0:Tyes150601542-13761103
SSP387093:0:Tyes--2-10
SSP644076:5:Fyes-0----
SSP644076:7:Fyes--0-12
SSP64471:0:Tyes0-771--744
SSP84588:0:Tyes514-0--16
SSP94122:1:Tyes3061054
SSUI391295:0:Tyes416-2--0
SSUI391296:0:Tyes410-2--0
STHE264199:0:Tyes76-0-12
STHE292459:0:Tyes32571060-12
STHE299768:0:Tno77-0-12
STHE322159:2:Tyes73-0-12
STRO369723:0:Tyes0-2828--2825
STYP99287:1:Tyes105943
SWOL335541:0:Tyes0-2247--2245
TCRU317025:0:Tyes4770480-479478
TDEN292415:0:Tyes105943
TDEN326298:0:Tyes--1-0-
TELO197221:0:Tyes8-0-141142
TERY203124:0:Tyes0-1419-24782479
TFUS269800:0:Tyes02222----
TKOD69014:0:Tyes-0----
TLET416591:0:Tyes2851754--0-
TMAR243274:0:Tyes14470--1428-
TPAL243276:0:Tyes-0----
TPET390874:0:Tno3860--405-
TPSE340099:0:Tyes0304----
TROS309801:1:Tyes0-1151-11501149
TSP1755:0:Tyes0357----
TSP28240:0:Tyes4970--477-
TTEN273068:0:Tyes18321465--01
TTHE262724:1:Tyes01537----
TTHE300852:2:Tyes01538----
TTUR377629:0:Tyes06331335330329
TWHI203267:0:Tyes0444----
TWHI218496:0:Tno4100----
UMET351160:0:Tyes-0----
VCHO:0:Tyes231002313231723122311
VCHO345073:1:Tno241102408240424092410
VEIS391735:1:Tyes101622714056
VFIS312309:2:Tyes2140217221216215
VPAR223926:1:Tyes284002843284728422841
VVUL196600:2:Tyes285602859286328582857
VVUL216895:1:Tno3670364360365366
WSUC273121:0:Tyes--0-12
XAUT78245:1:Tyes-2350--02
XAXO190486:0:Tyes7013171211
XCAM190485:0:Tyes9204056
XCAM314565:0:Tno11016201514
XCAM316273:0:Tno9184056
XCAM487884:0:Tno9014181312
XFAS160492:2:Tno101901023102710221021
XFAS183190:1:Tyes3100314318313312
XFAS405440:0:Tno3480352356351350
XORY291331:0:Tno9194056
XORY342109:0:Tyes10154056
XORY360094:0:Tno19031392927
YENT393305:1:Tyes104832
YPES187410:5:Tno104832
YPES214092:3:Tno104832
YPES349746:2:Tno104832
YPES360102:3:Tyes104832
YPES377628:2:Tno104832
YPES386656:2:Tno784056
YPSE273123:2:Tno104832
YPSE349747:2:Tno104832
ZMOB264203:0:Tyes-0--188189



Back to top