CANDIDATE ID: 178

CANDIDATE ID: 178

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9950130e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   2.8686800e-22

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6825 (cspI) (b1552)
   Products of gene:
     - G6825-MONOMER (Qin prophage; cold shock protein)

- G6511 (cspG) (b0990)
   Products of gene:
     - G6511-MONOMER (cold shock protein CspG)

- G6510 (cspH) (b0989)
   Products of gene:
     - G6510-MONOMER (stress protein, member of the CspA family)

- EG12205 (cspF) (b1558)
   Products of gene:
     - EG12205-MONOMER (Qin prophage; cold shock protein)

- EG12179 (cspE) (b0623)
   Products of gene:
     - EG12179-MONOMER (transcription antiterminator and regulator of RNA stability)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 111
Effective number of orgs (counting one per cluster within 468 clusters): 71

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1145
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
SSON300269 ncbi Shigella sonnei Ss0465
SPRO399741 ncbi Serratia proteamaculans 5685
SONE211586 ncbi Shewanella oneidensis MR-14
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
RSP101510 ncbi Rhodococcus jostii RHA15
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PPRO298386 ncbi Photobacterium profundum SS95
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 374
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN122587 ncbi Neisseria meningitidis Z24914
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DARO159087 ncbi Dechloromonas aromatica RCB4
CNOV386415 ncbi Clostridium novyi NT5
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBLO203907 ncbi Candidatus Blochmannia floridanus5
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BSP36773 Burkholderia sp.4
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128225
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K165
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBRO257310 ncbi Bordetella bronchiseptica RB505
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)5
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)5
BANT592021 ncbi Bacillus anthracis A02485
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62928 ncbi Azoarcus sp. BH724
ASP1667 Arthrobacter sp.5
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AHYD196024 Aeromonas hydrophila dhakensis5
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N5
AAUR290340 ncbi Arthrobacter aurescens TC14


Names of the homologs of the genes in the group in each of these orgs
  G6825   G6511   G6510   EG12205   EG12179   
YPSE349747 YPSIP31758_0375YPSIP31758_0375YPSIP31758_0376YPSIP31758_0374YPSIP31758_2958
YPSE273123 YPTB3587YPTB2950YPTB3586YPTB3587YPTB1088
YPES386656 YPDSF_0250YPDSF_0250YPDSF_0251YPDSF_0251YPDSF_2659
YPES377628 YPN_3527YPN_3527YPN_3526YPN_3526YPN_2376
YPES360102 YPA_3656YPA_3656YPA_3657YPA_3657YPA_2504
YPES349746 YPANGOLA_A1221YPANGOLA_A1221YPANGOLA_A1220YPANGOLA_A1220YPANGOLA_A1858
YPES214092 YPO3643YPO3643YPO3644YPO3644YPO2595
YPES187410 Y0224Y0224Y0223Y0223Y1166
YENT393305 YE3823YE3823YE3823YE3823YE3012
VVUL216895 VV1_2757VV1_2757VV1_2757VV1_2757VV2_0503
VVUL196600 VV1504VV1504VV1504VV1504VVA1052
VPAR223926 VPA1289VPA1289VPA1289VPA1289
VFIS312309 VFA1094VFA1094VFA1094VFA1094VFA1094
VCHO345073 VC0395_0306VC0395_0306VC0395_1111VC0395_0306VC0395_0306
VCHO VCA0933VCA0933VCA0166VCA0933VCA0933
TTUR377629 TERTU_3792TERTU_3792TERTU_3792TERTU_3792TERTU_3792
STYP99287 STM1996STM1996STM1243STM1243STM0629
SSON300269 SSO_0997SSO_0997SSO_0995SSO_0995SSO_0577
SPRO399741 SPRO_3862SPRO_3862SPRO_2061SPRO_2061SPRO_1189
SONE211586 SO_1648SO_1648SO_1648SO_1648
SHIGELLA CSPGCSPGCSPHCSPHCSPE
SGLO343509 SG0145SG0145SG0145SG0145SG1320
SFLE373384 SFV_1000SFV_1000SFV_0997SFV_0997SFV_0702
SFLE198214 AAN42619.1AAN42619.1AAN42618.1AAN42618.1AAN42293.1
SERY405948 SACE_3872SACE_3872SACE_0594SACE_0594
SENT454169 SEHA_C2214SEHA_C2214SEHA_C0744SEHA_C3973SEHA_C0744
SENT321314 SCH_1999SCH_3581SCH_1254SCH_1254SCH_0658
SENT295319 SPA0874SPA0874SPA1603SPA1603SPA2105
SENT220341 STY2204STY2204STY1881STY1881STY0678
SENT209261 T0882T0882T1115T1115T2238
SDYS300267 SDY_4347SDY_4347SDY_0964SDY_0964SDY_0546
SDEN318161 SDEN_0927SDEN_0927SDEN_0927SDEN_0927SDEN_0927
SDEG203122 SDE_3558SDE_3558SDE_3558SDE_3558
SBOY300268 SBO_2241SBO_2241SBO_2242SBO_2242SBO_0488
SBAL402882 SHEW185_1464SHEW185_1464SHEW185_1464SHEW185_1464SHEW185_1464
SBAL399599 SBAL195_1500SBAL195_1500SBAL195_1500SBAL195_1500SBAL195_1500
RSP101510 RHA1_RO04351RHA1_RO08619RHA1_RO08619RHA1_RO08619RHA1_RO04351
PTHE370438 PTH_2755PTH_2755PTH_2755PTH_2755PTH_2755
PPRO298386 PBPRB0036PBPRB0036PBPRA1963PBPRA1963PBPRB1858
PMUL272843 PM0655PM0655PM0655PM0655
PLUM243265 PLU3790PLU3790PLU1842PLU1842PLU1289
PING357804 PING_1953PING_2698PING_2158PING_0279
OIHE221109 OB0579OB0579OB0579OB0579OB0579
NMUL323848 NMUL_A1291NMUL_A2246NMUL_A2246NMUL_A2246
NMEN122587 NMA1047NMA1047NMA1047NMA1047
NEUT335283 NEUT_2046NEUT_0302NEUT_0302NEUT_0302NEUT_2046
NEUR228410 NE1731NE1312NE1312NE1312
MTHE264732 MOTH_0226MOTH_0226MOTH_0226MOTH_0226
MSUC221988 MS1144MS1144MS1144MS1144MS1144
LSPH444177 BSPH_2688BSPH_2688BSPH_2797BSPH_2797
KPNE272620 GKPORF_B3271GKPORF_B3271GKPORF_B5080GKPORF_B3271GKPORF_B5080
JSP375286 MMA_2516MMA_2516MMA_2516MMA_2516
ILOI283942 IL2493IL2493IL2493IL2493IL2493
HDUC233412 HD_1008HD_1008HD_1008HD_1008HD_1008
HCHE349521 HCH_05571HCH_04707HCH_04707HCH_05571
HARS204773 HEAR2448HEAR2448HEAR2448HEAR2448
ESP42895 ENT638_0201ENT638_2498ENT638_2498ENT638_2498ENT638_1159
EFER585054 EFER_4442EFER_4442EFER_4435EFER_4435EFER_2480
ECOO157 CSPGCSPGCSPHCSPHCSPE
ECOL83334 ECS1145ECS1145ECS1144ECS1144ECS0662
ECOL585397 ECED1_1066ECED1_1066ECED1_1065ECED1_1065ECED1_0620
ECOL585057 ECIAI39_1505ECIAI39_2164ECIAI39_2165ECIAI39_1499ECIAI39_0599
ECOL585056 ECUMN_1839ECUMN_1172ECUMN_1171ECUMN_1845ECUMN_0716
ECOL585055 EC55989_1100EC55989_1100EC55989_1097EC55989_1097EC55989_0616
ECOL585035 ECS88_5022ECS88_1005ECS88_1003ECS88_5016ECS88_0665
ECOL585034 ECIAI1_1595ECIAI1_1031ECIAI1_1029ECIAI1_1601ECIAI1_0607
ECOL481805 ECOLC_2085ECOLC_2607ECOLC_2608ECOLC_2078ECOLC_3021
ECOL469008 ECBD_2605ECBD_2605ECBD_2606ECBD_2606ECBD_3027
ECOL439855 ECSMS35_2135ECSMS35_2135ECSMS35_2137ECSMS35_2137ECSMS35_0644
ECOL413997 ECB_01517ECB_00992ECB_00991ECB_00991ECB_00593
ECOL409438 ECSE_1051ECSE_1051ECSE_1050ECSE_1050ECSE_0691
ECOL364106 UTI89_C1051UTI89_C1051UTI89_C1050UTI89_C1050UTI89_C0627
ECOL362663 ECP_0987ECP_0987ECP_0986ECP_0986ECP_0654
ECOL331111 ECE24377A_1105ECE24377A_1105ECE24377A_1104ECE24377A_1104ECE24377A_0648
ECOL316407 ECK1546:JW1544:B1552ECK0980:JW0974:B0990ECK0979:JW5134:B0989ECK1552:JW1550:B1558ECK0616:JW0618:B0623
ECOL199310 C3177C1123C1122C3185C0714
ECAR218491 ECA2471ECA2471ECA2471ECA2471ECA1294
DARO159087 DARO_3392DARO_3093DARO_3093DARO_3093
CNOV386415 NT01CX_0617NT01CX_0617NT01CX_0617NT01CX_0617NT01CX_0617
CBLO291272 BPEN_462BPEN_462BPEN_462BPEN_462BPEN_462
CBLO203907 BFL448BFL448BFL448BFL448BFL448
BWEI315730 BCERKBAB4_2236BCERKBAB4_4985BCERKBAB4_4985BCERKBAB4_4985
BSP36773 BCEP18194_A5852BCEP18194_A5852BCEP18194_A5852BCEP18194_A5852
BSP107806 BU322BU489BU489BU489BU489
BPET94624 BPET2795BPET2794BPET2794BPET2794BPET2663
BPER257313 BP2757BP2757BP2757BP2757
BPAR257311 BPP2571BPP2003BPP2003BPP2571BPP2571
BHAL272558 BH3610BH3610BH3610BH3610
BCLA66692 ABC3070ABC3070ABC3070ABC3070ABC3070
BCIC186490 BCI_0261BCI_0261BCI_0261BCI_0261BCI_0261
BCER405917 BCE_5298BCE_5298BCE_5298BCE_5298
BCER315749 BCER98_3728BCER98_1777BCER98_3728BCER98_3728
BCEN331272 BCEN2424_2520BCEN2424_2520BCEN2424_2520BCEN2424_2520
BCEN331271 BCEN_1909BCEN_1909BCEN_1909BCEN_1909
BBRO257310 BB2016BB2251BB2251BB2016BB2016
BAPH372461 BCC_308BCC_308BCC_308BCC_308BCC_308
BAPH198804 BUSG473BUSG473BUSG473BUSG473BUSG473
BANT592021 BAA_5453BAA_5453BAA_5453BAA_5453BAA_5453
BANT261594 GBAA5424GBAA5424GBAA5424GBAA5424GBAA5424
BANT260799 BAS5040BAS5040BAS5040BAS5040BAS5040
ASP76114 EBC12EBC12EBC12EBC12
ASP62928 AZO2121AZO1134AZO1134AZO2603
ASP1667 ARTH_1055ARTH_1055ARTH_0472ARTH_0472ARTH_2600
ASAL382245 ASA_4001ASA_4001ASA_4001ASA_4001ASA_4001
APLE434271 APJL_0119APJL_0119APJL_0119APJL_0119APJL_0119
APLE416269 APL_0118APL_0118APL_0118APL_0118APL_0118
AHYD196024 AHA_3962AHA_3962AHA_3962AHA_3962AHA_3962
AEHR187272 MLG_2676MLG_2676MLG_2676MLG_2676
ABOR393595 ABO_2744ABO_2744ABO_2744ABO_2744
ABAU360910 BAV1492BAV3424BAV1494BAV2092BAV2092
AAUR290340 AAUR_1174AAUR_1174AAUR_1174AAUR_2590


Organism features enriched in list (features available for 103 out of the 111 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000099334112
Disease:Bubonic_plague 0.000026966
Disease:Dysentery 0.000026966
Disease:Gastroenteritis 3.425e-61013
Endospores:No 0.000072921211
GC_Content_Range4:0-40 5.298e-815213
GC_Content_Range4:40-60 7.533e-1676224
GC_Content_Range4:60-100 0.000166012145
GC_Content_Range7:30-40 8.750e-89166
GC_Content_Range7:40-50 0.002623931117
GC_Content_Range7:50-60 1.469e-1145107
GC_Content_Range7:60-70 0.000292911134
Genome_Size_Range5:0-2 4.786e-96155
Genome_Size_Range5:2-4 0.000011217197
Genome_Size_Range5:4-6 8.980e-2174184
Genome_Size_Range9:1-2 1.618e-111128
Genome_Size_Range9:2-3 0.001932611120
Genome_Size_Range9:3-4 0.0051720677
Genome_Size_Range9:4-5 2.051e-114296
Genome_Size_Range9:5-6 2.447e-63288
Gram_Stain:Gram_Neg 3.372e-781333
Gram_Stain:Gram_Pos 0.000566514150
Motility:No 1.133e-86151
Motility:Yes 2.928e-668267
Oxygen_Req:Aerobic 0.000183718185
Oxygen_Req:Anaerobic 0.00042897102
Oxygen_Req:Facultative 8.839e-1266201
Pathogenic_in:Human 0.001992150213
Pathogenic_in:No 0.002436828226
Shape:Coccus 6.663e-6282
Shape:Rod 1.199e-784347
Temp._range:Mesophilic 0.006319492473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 389
Effective number of orgs (counting one per cluster within 468 clusters): 323

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M121
XFAS183190 ncbi Xylella fastidiosa Temecula11
XFAS160492 ncbi Xylella fastidiosa 9a5c1
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SLAC55218 Ruegeria lacuscaerulensis0
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)1
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30001
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a1
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.1
PSP296591 ncbi Polaromonas sp. JS6660
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ951
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1251
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER208964 ncbi Pseudomonas aeruginosa PAO11
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA141
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NHAM323097 ncbi Nitrobacter hamburgensis X141
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP266779 ncbi Chelativorans sp. BNC11
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCHO395495 ncbi Leptothrix cholodnii SP-60
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf41
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5831
ECOL405955 ncbi Escherichia coli APEC O10
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6825   G6511   G6510   EG12205   EG12179   
ZMOB264203
XFAS405440 XFASM12_1522
XFAS183190 PD_1380
XFAS160492 XF2352
XAUT78245
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN243275
TACI273075
SWOL335541
STOK273063
STHE322159 STER_0880
STHE299768 STR0838
STHE292459
STHE264199 STU0838
SSUI391296
SSUI391295
SSP94122 SHEWANA3_2569
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSAP342451
SRUB309807
SPYO286636 M6_SPY1764
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMEL266834
SMED366394
SMAR399550
SLOI323850 SHEW_1614
SLAC55218
SHAE279808
SGOR29390
SFUM335543
SEPI176280
SEPI176279
SELO269084
SCO SCO6439
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RMET266264 RMET_2894
RMAS416276
RLEG216596
RFER338969
RFEL315456
RETL347834 RHE_CH01169
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PSYR223283 PSPTO_2376
PSYR205918 PSYR_2160
PSTU379731
PSP56811 PSYCPRWF_2170
PSP296591
PSP117
PRUM264731
PPUT351746
PPUT160488
PPEN278197 PEPE_1445
PNAP365044
PMOB403833 PMOB_0010
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PHAL326442 PSHAB0387
PGIN242619
PFUR186497
PFLU205922 PFL_1929
PENT384676
PDIS435591
PCRY335284 PCRYO_2133
PCAR338963 PCAR_0201
PAST100379
PARS340102
PARC259536 PSYC_1846
PAER208964 PA0456
PAER208963 PA14_05960
PAER178306
PACN267747
PABY272844
OTSU357244
OANT439375
NWIN323098
NSP387092
NSP103690
NSEN222891
NPHA348780
NOCE323261
NHAM323097 NHAM_3148
NARO279238
MXAN246197
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSP409
MSP266779 MESO_2134
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLOT266835 MLR2648
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610 MEXT_3947
MCAP340047
MCAP243233
MBUR259564
MBAR269797
MART243272
MAER449447
MAEO419665
MACE188937
LXYL281090 LXX24460
LWEL386043
LSAK314315
LREU557436
LPNE400673 LPC_2917
LPNE297246 LPP0493
LPNE297245 LPL0469
LPNE272624 LPG0426
LPLA220668 LP_0031
LMON265669
LMON169963
LMES203120
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566 LHV_0577
LGAS324831
LDEL390333 LDB2117
LDEL321956 LBUL_1957
LCHO395495
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HBUT415426
HAUR316274
HACI382638
GVIO251221
GURA351605 GURA_3670
GTHE420246
GSUL243231 GSU_0207
GOXY290633
GMET269799
GKAU235909
GFOR411154
GBET391165
FSUC59374
FSP1855
FSP106370
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185 EF_1367
ECOL405955
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRAD243230
DPSY177439
DOLE96561 DOLE_3065
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78
CSP501479
CSAL290398
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1818
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHUT269798
CHOM360107
CGLU196627 CG0371
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT508765
CBEI290402
CAULO
CACE272562 CAC0807
CABO218497
BTUR314724
BTRI382640
BTHE226186
BSUI470137
BSUI204722
BSUB
BQUI283165
BPUM315750
BOVI236
BMEL359391
BMEL224914
BLON206672
BLIC279010
BJAP224911 BSR3154
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCAN483179
BBUR224326
BBAC360095
BBAC264462
BAMY326423
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP232721
APHA212042
APER272557
ANAE240017
AMET293826 AMET_1296
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159 AFE_2450
ACRY349163
ACAU438753
ABUT367737
ABAC204669
AAEO224324


Organism features enriched in list (features available for 363 out of the 389 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.003559058112
Disease:Gastroenteritis 0.0037274313
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00514511111
Disease:Wide_range_of_infections 0.0003583111
Endospores:No 0.0023754146211
Endospores:Yes 0.00008982053
GC_Content_Range4:0-40 1.584e-7161213
GC_Content_Range4:40-60 0.0064250127224
GC_Content_Range4:60-100 0.000483274145
GC_Content_Range7:30-40 9.325e-7128166
GC_Content_Range7:50-60 0.000539852107
GC_Content_Range7:60-70 0.002067070134
Genome_Size_Range5:0-2 2.464e-12131155
Genome_Size_Range5:2-4 3.503e-8152197
Genome_Size_Range5:4-6 4.849e-2657184
Genome_Size_Range9:1-2 1.600e-10109128
Genome_Size_Range9:2-3 0.000035193120
Genome_Size_Range9:3-4 0.00181875977
Genome_Size_Range9:4-5 3.615e-93496
Genome_Size_Range9:5-6 6.513e-142388
Gram_Stain:Gram_Neg 0.0032020193333
Gram_Stain:Gram_Pos 0.004266581150
Habitat:Multiple 0.002834997178
Habitat:Specialized 0.00038974453
Motility:Yes 0.0001674146267
Optimal_temp.:30-37 0.00016801818
Oxygen_Req:Anaerobic 0.000025781102
Oxygen_Req:Facultative 5.599e-798201
Pathogenic_in:Human 0.0003157114213
Pathogenic_in:No 0.0000149164226
Shape:Coccus 0.00854006082
Shape:Irregular_coccus 0.00027481717
Shape:Rod 2.090e-13175347
Shape:Sphere 0.00124301819
Shape:Spiral 1.238e-63334
Temp._range:Hyperthermophilic 0.00147392123
Temp._range:Mesophilic 1.998e-6274473
Temp._range:Thermophilic 0.00032743135



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri) 0.00088673515


Names of the homologs of the genes in the group in each of these orgs
  G6825   G6511   G6510   EG12205   EG12179   
BAPH372461 BCC_308BCC_308BCC_308BCC_308BCC_308


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50410.4955
GALACTITOLCAT-PWY (galactitol degradation)73490.4694
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)218890.4411
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45350.4372
GLUTDEG-PWY (glutamate degradation II)194820.4297
PWY-6374 (vibriobactin biosynthesis)77470.4242
ECASYN-PWY (enterobacterial common antigen biosynthesis)191790.4091
RHAMCAT-PWY (rhamnose degradation)91500.4013



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6511   G6510   EG12205   EG12179   
G68250.9997250.9994060.9994160.999489
G65110.9994540.9995010.999446
G65100.9997010.999398
EG122050.999477
EG12179



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PAIRWISE BLAST SCORES:

  G6825   G6511   G6510   EG12205   EG12179   
G68250.0f01.7e-25--1.4e-21
G65111.7e-250.0f0--9.7e-21
G65103.8e-103.8e-100.0f01.7e-231.7e-9
EG122058.0e-101.3e-91.7e-230.0f09.1e-9
EG121791.4e-219.7e-21--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6510 G6511 (centered at G6511)
EG12179 (centered at EG12179)
EG12205 (centered at EG12205)
G6825 (centered at G6825)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6825   G6511   G6510   EG12205   EG12179   
171/623177/623168/623176/623180/623
AAUR290340:2:Tyes00-01376
AAVE397945:0:Tyes00--0
ABAU360910:0:Tyes019352593593
ABOR393595:0:Tyes000-0
ACEL351607:0:Tyes-00--
ADEH290397:0:Tyes--00741
AEHR187272:0:Tyes0-000
AFER243159:0:Tyes----0
AHYD196024:0:Tyes00000
AMET293826:0:Tyes--0--
AORE350688:0:Tyes--00-
APLE416269:0:Tyes00000
APLE434271:0:Tno00000
ASAL382245:5:Tyes00000
ASP1667:3:Tyes590590002152
ASP62928:0:Tyes10090-01493
ASP62977:0:Tyes150-0--
ASP76114:2:Tyes00-00
BAMB339670:3:Tno--00-
BAMB398577:3:Tno--00-
BANT260799:0:Tno00000
BANT261594:2:Tno00000
BANT568206:2:Tyes--000
BANT592021:2:Tno00000
BAPH198804:0:Tyes00000
BAPH372461:0:Tyes00000
BBRO257310:0:Tyes023823800
BCEN331271:2:Tno0-000
BCEN331272:3:Tyes0-000
BCER226900:1:Tyes--000
BCER288681:0:Tno--000
BCER315749:1:Tyes184601846-1846
BCER405917:1:Tyes-0000
BCER572264:1:Tno--000
BCIC186490:0:Tyes00000
BCLA66692:0:Tyes00000
BHAL272558:0:Tyes-0000
BJAP224911:0:Fyes---0-
BMAL243160:1:Tno473-00-
BMAL320388:1:Tno--00-
BMAL320389:1:Tyes1010-00-
BPAR257311:0:Tno55100551551
BPER257313:0:Tyes00-00
BPET94624:0:Tyes1361351351350
BPSE272560:1:Tyes2197-00-
BPSE320372:1:Tno2595-00-
BPSE320373:1:Tno2540-00-
BSP107806:2:Tyes0166166166166
BSP36773:2:Tyes0-000
BSP376:0:Tyes--00-
BTHA271848:1:Tno2128-00-
BTHU281309:1:Tno--000
BTHU412694:1:Tno--000
BVIE269482:7:Tyes--00-
BWEI315730:4:Tyes0-270427042704
BXEN266265:1:Tyes00---
CACE272562:1:Tyes---0-
CBLO203907:0:Tyes00000
CBLO291272:0:Tno00000
CBOT36826:1:Tno-1081-0-
CBOT441770:0:Tyes-1062-0-
CBOT441771:0:Tno-1063-0-
CBOT441772:1:Tno-1101-0-
CBOT498213:1:Tno-1105-0-
CBOT515621:2:Tyes-1137-0-
CBOT536232:0:Tno-1173-0-
CDIF272563:1:Tyes--0-0
CDIP257309:0:Tyes00--0
CEFF196164:0:Fyes00--0
CGLU196627:0:Tyes0----
CHYD246194:0:Tyes--000
CJAP155077:0:Tyes--0-0
CJEI306537:0:Tyes00--0
CKLU431943:1:Tyes---0-
CMIC31964:2:Tyes00---
CMIC443906:2:Tyes00---
CNOV386415:0:Tyes00000
CPSY167879:0:Tyes-0--3710
CVIO243365:0:Tyes---00
DARO159087:0:Tyes3000-00
DOLE96561:0:Tyes---0-
DRED349161:0:Tyes--16500
ECAR218491:0:Tyes11811181118111810
ECOL199310:0:Tno241540440324230
ECOL316407:0:Tno9393663659450
ECOL331111:6:Tno4344344334330
ECOL362663:0:Tno3323323313310
ECOL364106:1:Tno4244244234230
ECOL409438:6:Tyes3763763753750
ECOL413997:0:Tno9254124114110
ECOL439855:4:Tno14501450145114510
ECOL469008:0:Tno0011425
ECOL481805:0:Tno75285290951
ECOL585034:0:Tno9834324309890
ECOL585035:0:Tno419133933741850
ECOL585055:0:Tno4874874844840
ECOL585056:2:Tno113146946811370
ECOL585057:0:Tno930156815699240
ECOL585397:0:Tno4564564554550
ECOL83334:0:Tno5025025015010
ECOLI:0:Tno9533683679590
ECOO157:0:Tno5955955945940
EFAE226185:3:Tyes-0---
EFER585054:1:Tyes19261926192019200
ESP42895:1:Tyes0231223122312965
FNOD381764:0:Tyes--001724
FNUC190304:0:Tyes0-0-0
FPHI484022:1:Tyes--00-
FRANT:0:Tno--00-
FTUL351581:0:Tno--00-
FTUL393011:0:Tno--00-
FTUL393115:0:Tyes--00-
FTUL401614:0:Tyes--00-
FTUL418136:0:Tno--00-
FTUL458234:0:Tno--00-
GSUL243231:0:Tyes----0
GURA351605:0:Tyes----0
HARS204773:0:Tyes00-00
HCHE349521:0:Tyes84400-844
HDUC233412:0:Tyes00000
ILOI283942:0:Tyes00000
JSP375286:0:Tyes00-00
KPNE272620:2:Tyes00175901759
KRAD266940:2:Fyes-0--0
LCAS321967:1:Tyes--00-
LDEL321956:0:Tyes-0---
LDEL390333:0:Tyes-0---
LHEL405566:0:Tyes-0---
LLAC272622:4:Tyes00---
LLAC272623:0:Tyes0361---
LPLA220668:0:Tyes-0---
LPNE272624:0:Tno--0--
LPNE297245:1:Fno--0--
LPNE297246:1:Fyes--0--
LPNE400673:0:Tno--0--
LSPH444177:1:Tyes00103-103
LXYL281090:0:Tyes-0---
MABS561007:1:Tyes00---
MAQU351348:2:Tyes0-0-1214
MAVI243243:0:Tyes00---
MBOV233413:0:Tno00---
MBOV410289:0:Tno00---
MEXT419610:0:Tyes--0--
MGIL350054:3:Tyes00---
MLEP272631:0:Tyes00---
MLOT266835:2:Tyes---0-
MPET420662:1:Tyes-0--0
MSME246196:0:Tyes00---
MSP164756:1:Tno25282528--0
MSP164757:0:Tno28602860--0
MSP189918:2:Tyes25662566--0
MSP266779:3:Tyes--0--
MSP400668:0:Tyes--000
MSUC221988:0:Tyes00000
MTBCDC:0:Tno00---
MTBRV:0:Tno00---
MTHE264732:0:Tyes0-000
MTUB336982:0:Tno00---
MTUB419947:0:Tyes00---
MVAN350058:0:Tyes00---
NEUR228410:0:Tyes4250-00
NEUT335283:2:Tyes17140001714
NFAR247156:2:Tyes00--0
NGON242231:0:Tyes--000
NHAM323097:2:Tyes---0-
NMEN122586:0:Tno--000
NMEN122587:0:Tyes0-000
NMEN272831:0:Tno--000
NMEN374833:0:Tno--000
NMUL323848:3:Tyes0944-944944
NSP35761:1:Tyes00--0
OCAR504832:0:Tyes--00-
OIHE221109:0:Tyes00000
PAER208963:0:Tyes----0
PAER208964:0:Tno----0
PARC259536:0:Tyes----0
PATL342610:0:Tyes-00-0
PCAR338963:0:Tyes----0
PCRY335284:1:Tyes----0
PFLU205922:0:Tyes0----
PFLU216595:1:Tyes00---
PFLU220664:0:Tyes00---
PHAL326442:0:Tyes----0
PING357804:0:Tyes158122671759-0
PLUM243265:0:Fyes253525355805800
PMOB403833:0:Tyes---0-
PMUL272843:1:Tyes0000-
PPEN278197:0:Tyes-0---
PPRO298386:1:Tyes00--1821
PPRO298386:2:Tyes--00-
PPUT76869:0:Tno00---
PSP312153:0:Tyes--1185-0
PSP56811:2:Tyes----0
PSYR205918:0:Tyes0----
PSYR223283:2:Tyes0----
PTHE370438:0:Tyes00000
RETL347834:5:Tyes---0-
REUT264198:2:Tyes--00-
REUT381666:1:Tyes-000-
RMET266264:2:Tyes--0--
RPAL258594:0:Tyes--22370-
RPAL316055:0:Tyes--00-
RPAL316056:0:Tyes--00-
RPAL316057:0:Tyes--19930-
RPAL316058:0:Tyes--10000-
RSAL288705:0:Tyes00--0
RSOL267608:0:Tyes---00
RSP101510:2:Fyes-000-
RSP101510:3:Fyes0---0
SACI56780:0:Tyes--291029100
SARE391037:0:Tyes-0--800
SAVE227882:1:Fyes941-0--
SBAL399599:3:Tyes00000
SBAL402882:1:Tno00000
SBOY300268:1:Tyes16491649165016500
SCO:2:Fyes---0-
SDEG203122:0:Tyes000-0
SDEN318161:0:Tyes00000
SDYS300267:1:Tyes355735574024020
SENT209261:0:Tno002202201288
SENT220341:0:Tno13641364107810780
SENT295319:0:Tno006936931178
SENT321314:2:Tno136529746116110
SENT454169:2:Tno14191419031100
SERY405948:0:Tyes3233323300-
SFLE198214:0:Tyes3363363353350
SFLE373384:0:Tno2842842812810
SGLO343509:3:Tyes00001206
SHAL458817:0:Tyes00--0
SHIGELLA:0:Tno3523523493490
SLOI323850:0:Tyes-0---
SONE211586:1:Tyes000-0
SPEA398579:0:Tno00--0
SPRO399741:1:Tyes271127118898890
SPYO160490:0:Tno00---
SPYO186103:0:Tno00---
SPYO193567:0:Tno00--0
SPYO198466:0:Tno00---
SPYO286636:0:Tno-0---
SPYO293653:0:Tno00--0
SPYO319701:0:Tyes00--0
SPYO370551:0:Tno00--0
SPYO370552:0:Tno00--0
SPYO370553:0:Tno00--0
SPYO370554:0:Tyes00--0
SSED425104:0:Tyes00--0
SSON300269:1:Tyes4024024004000
SSP94122:1:Tyes-0---
STHE264199:0:Tyes-0---
STHE299768:0:Tno-0---
STHE322159:2:Tyes-0---
STRO369723:0:Tyes00--1148
STYP99287:1:Tyes135313536076070
TCRU317025:0:Tyes0---0
TDEN292415:0:Tyes00--0
TLET416591:0:Tyes0--0351
TTUR377629:0:Tyes00000
VCHO:1:Fyes7557550755755
VCHO345073:0:Tno0080000
VFIS312309:1:Tyes00000
VPAR223926:0:Tyes000-0
VVUL196600:1:Tyes----0
VVUL196600:2:Tyes0000-
VVUL216895:0:Tno----0
VVUL216895:1:Tno0000-
XAXO190486:0:Tyes---00
XCAM190485:0:Tyes---00
XCAM314565:0:Tno---00
XCAM316273:0:Tno---00
XCAM487884:0:Tno---00
XFAS160492:2:Tno--0--
XFAS183190:1:Tyes--0--
XFAS405440:0:Tno--0--
XORY291331:0:Tno---00
XORY342109:0:Tyes---00
XORY360094:0:Tno---00
YENT393305:1:Tyes7987987987980
YPES187410:5:Tno1100966
YPES214092:3:Tno10031003100410040
YPES349746:2:Tno1100622
YPES360102:3:Tyes11691169117011700
YPES377628:2:Tno11771177117611760
YPES386656:2:Tno00112407
YPSE273123:2:Tno25021874250125020
YPSE349747:2:Tno11202557



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