CANDIDATE ID: 179

CANDIDATE ID: 179

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9966700e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   3.8001001e-41

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7619 (yhaJ) (b3105)
   Products of gene:
     - G7619-MONOMER (predicted DNA-binding transcriptional regulator LYSR-type)

- G7088 (yeeY) (b2015)
   Products of gene:
     - G7088-MONOMER (predicted DNA-binding transcriptional regulator)

- G6274 (allS) (b0504)
   Products of gene:
     - G6274-MONOMER (AllS transcriptional activator)
     - MONOMER0-2221 (AllS-allantoin DNA-binding transcriptional activator)
       Regulatees:
        TU0-7622 (allDC-ylbA)

- G6181 (yahB) (b0316)
   Products of gene:
     - G6181-MONOMER (predicted DNA-binding transcriptional regulator LYSR-type)

- EG12140 (ydhB) (b1659)
   Products of gene:
     - EG12140-MONOMER (protein with similarity to transcriptional regulators)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 143
Effective number of orgs (counting one per cluster within 468 clusters): 96

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
SSP94122 ncbi Shewanella sp. ANA-35
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-45
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
NHAM323097 ncbi Nitrobacter hamburgensis X144
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16225
MSP400668 ncbi Marinomonas sp. MWYL15
MPET420662 ncbi Methylibium petroleiphilum PM15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans5
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CJAP155077 Cellvibrio japonicus5
BXEN266265 ncbi Burkholderia xenovorans LB4005
BVIE269482 ncbi Burkholderia vietnamiensis G45
BSP36773 Burkholderia sp.5
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BBRO257310 ncbi Bordetella bronchiseptica RB505
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
AHYD196024 Aeromonas hydrophila dhakensis5
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  G7619   G7088   G6274   G6181   EG12140   
YPSE349747 YPSIP31758_0478YPSIP31758_0478YPSIP31758_1754YPSIP31758_1754YPSIP31758_1754
YPSE273123 YPTB3490YPTB3490YPTB2301YPTB2301YPTB2301
YPES386656 YPDSF_0352YPDSF_0352YPDSF_0759YPDSF_0759YPDSF_0759
YPES377628 YPN_3428YPN_3428YPN_1842YPN_1842YPN_1842
YPES360102 YPA_3757YPA_3757YPA_1733YPA_1733YPA_1733
YPES349746 YPANGOLA_A1117YPANGOLA_A1117YPANGOLA_A2573YPANGOLA_A2573YPANGOLA_A2573
YPES214092 YPO3545YPO3545YPO2388YPO2388YPO2388
YPES187410 Y0113Y0113Y1949Y1949Y1949
YENT393305 YE3720YE3720YE2159YE2159YE2159
XORY360094 XOOORF_1742XOOORF_1742XOOORF_1742XOOORF_1742XOOORF_1742
XORY342109 XOO2783XOO2783XOO2783XOO2783XOO2783
XORY291331 XOO2932XOO2932XOO2932XOO2932XOO2932
XCAM487884 XCC-B100_2529XCC-B100_2529XCC-B100_2529XCC-B100_2529XCC-B100_2529
XCAM316273 XCAORF_1970XCAORF_1970XCAORF_1970XCAORF_1970XCAORF_1970
XCAM314565 XC_2502XC_2502XC_2502XC_2502XC_2502
XCAM190485 XCC1730XCC1730XCC1730XCC1730XCC1730
XAXO190486 XAC1748XAC1748XAC1748XAC1748XAC1748
VVUL216895 VV2_0277VV2_0277VV1_1027VV1_1027VV1_1027
VVUL196600 VVA0782VVA0782VV3245VV3245VV3245
VPAR223926 VPA0883VPA0883VP3063VP3063VP3063
VFIS312309 VFA1160VFA1160VFA1160VFA1160VFA1160
VCHO345073 VC0395_0518VC0395_0518VC0395_A2532VC0395_A2532VC0395_A2532
VCHO VCA0575VCA0575VC2760VC2760VC2760
TTUR377629 TERTU_0162TERTU_0162TERTU_0162TERTU_0162TERTU_0162
STYP99287 STM3235STM2069STM0514STM0514STM1429
SSP94122 SHEWANA3_1223SHEWANA3_1223SHEWANA3_2061SHEWANA3_2061SHEWANA3_2061
SSON300269 SSO_2085SSO_2085SSO_1497SSO_1497SSO_1497
SSED425104 SSED_2566SSED_2566SSED_2137SSED_2137SSED_2137
SPRO399741 SPRO_4333SPRO_4333SPRO_2194SPRO_2194SPRO_2194
SPEA398579 SPEA_1175SPEA_1175SPEA_2112SPEA_2112SPEA_2112
SONE211586 SO_3318SO_3318SO_2374SO_2374SO_2374
SMEL266834 SMA1933SMA1933SMA1782SMA0353SMA1782
SMED366394 SMED_5292SMED_5292SMED_4433SMED_5229SMED_4433
SLOI323850 SHEW_2013SHEW_2013SHEW_2013SHEW_2013SHEW_2013
SHIGELLA YHAJYEEYYBBSYBBSYDHB
SHAL458817 SHAL_2084SHAL_2084SHAL_2084SHAL_2084SHAL_2084
SGLO343509 SG0228SG0228SG0228SG0228
SFLE373384 SFV_3148SFV_2074SFV_0471SFV_0471SFV_1681
SFLE198214 AAN44618.1AAN43614.1AAN42097.1AAN42097.1AAN43266.1
SENT454169 SEHA_C3530SEHA_C2294SEHA_C0622SEHA_C0622SEHA_C1562
SENT321314 SCH_3181SCH_2079SCH_0555SCH_0555SCH_1448
SENT295319 SPA3104SPA0802SPA2208SPA2208SPA1424
SENT220341 STY3415STY2278STY0562STY0562STY1693
SENT209261 T3155T0805T2346T2346T1297
SDYS300267 SDY_3297SDY_2224SDY_0398SDY_0398SDY_1885
SDEN318161 SDEN_1810SDEN_1810SDEN_1810SDEN_1810SDEN_1810
SDEG203122 SDE_3745SDE_3745SDE_3745SDE_3745SDE_3745
SBOY300268 SBO_2972SBO_0841SBO_1472SBO_1472SBO_1472
SBAL402882 SHEW185_3011SHEW185_3011SHEW185_2204SHEW185_2204SHEW185_2204
SBAL399599 SBAL195_3154SBAL195_3154SBAL195_2312SBAL195_2312SBAL195_2312
RSOL267608 RSC2209RSC2209RSC2209RSC2209RSC2209
RPAL316056 RPC_2324RPC_2324RPC_2324RPC_2324RPC_2324
RPAL258594 RPA4283RPA4283RPA4283RPA4283RPA4283
RMET266264 RMET_2580RMET_2580RMET_2580RMET_2580RMET_2580
RLEG216596 RL1960RL1960RL1960RL1960RL1960
RFER338969 RFER_1907RFER_1907RFER_1907RFER_1907RFER_1907
REUT381666 H16_A2715H16_A2715H16_A2715H16_A2715H16_A2715
REUT264198 REUT_A0901REUT_A0901REUT_A0901REUT_A0901REUT_A0901
RETL347834 RHE_CH01765RHE_CH01765RHE_CH01765RHE_CH01765RHE_CH01765
RDEN375451 RD1_3759RD1_3759RD1_3759RD1_3759RD1_3759
PSYR205918 PSYR_3825PSYR_3825PSYR_1558PSYR_3825PSYR_3825
PSTU379731 PST_2684PST_2684PST_1800PST_2684PST_2684
PSP296591 BPRO_2902BPRO_2902BPRO_2902BPRO_2902BPRO_2902
PPUT76869 PPUTGB1_4046PPUTGB1_4046PPUTGB1_1515PPUTGB1_4046PPUTGB1_4046
PPUT351746 PPUT_1351PPUT_1351PPUT_3742PPUT_3742PPUT_1351
PPUT160488 PP_4539PP_4539PP_1984PP_4539PP_4539
PPRO298386 PBPRB0921PBPRB0921PBPRA2120PBPRA2120PBPRA2120
PNAP365044 PNAP_2932PNAP_2932PNAP_2932PNAP_2932PNAP_2932
PMEN399739 PMEN_1296PMEN_1296PMEN_1296PMEN_1296
PLUM243265 PLU3998PLU3998PLU2606PLU2606PLU2606
PING357804 PING_3247PING_3247PING_3247PING_3247PING_3247
PHAL326442 PSHAB0105PSHAB0105PSHAB0105PSHAB0105PSHAB0105
PFLU220664 PFL_1544PFL_1544PFL_2371PFL_2371PFL_1544
PFLU216595 PFLU1625PFLU1625PFLU1625PFLU1625PFLU1625
PFLU205922 PFL_1430PFL_1430PFL_1050PFL_1430PFL_1430
PENT384676 PSEEN3961PSEEN3961PSEEN1649PSEEN3961PSEEN3961
PATL342610 PATL_1675PATL_1675PATL_1675PATL_1675PATL_1675
PAER208964 PA3225PA3225PA3225PA0479PA3225
PAER208963 PA14_22470PA14_22470PA14_22470PA14_06260PA14_22470
NHAM323097 NHAM_1043NHAM_1043NHAM_1043NHAM_1043
NARO279238 SARO_1639SARO_2465SARO_1639SARO_1639SARO_1639
MXAN246197 MXAN_4110MXAN_5492MXAN_4110MXAN_4110MXAN_5492
MSP400668 MMWYL1_3537MMWYL1_3537MMWYL1_3537MMWYL1_3537MMWYL1_3537
MPET420662 MPE_A2890MPE_A2890MPE_A2890MPE_A2890MPE_A2890
MLOT266835 MLR2482MLL2420MLL2420MLL2420MLL2420
MFLA265072 MFLA_1835MFLA_1835MFLA_1835MFLA_1835MFLA_1835
MEXT419610 MEXT_1726MEXT_1726MEXT_1726MEXT_1726MEXT_1726
MCAP243233 MCA_2269MCA_2269MCA_2269MCA_2269MCA_2269
MAQU351348 MAQU_0852MAQU_0852MAQU_0852MAQU_0852MAQU_0852
LCHO395495 LCHO_0689LCHO_0689LCHO_0689LCHO_0689LCHO_0689
KPNE272620 GKPORF_B2877GKPORF_B1758GKPORF_B1096GKPORF_B1096GKPORF_B1096
JSP375286 MMA_0530MMA_0530MMA_1120MMA_1120MMA_1120
ILOI283942 IL1093IL1093IL0465IL1093
HCHE349521 HCH_00217HCH_00217HCH_00217HCH_00217
HARS204773 HEAR0452HEAR0452HEAR0452HEAR0452HEAR0452
ESP42895 ENT638_3558ENT638_2629ENT638_3146ENT638_3146ENT638_1788
ELIT314225 ELI_08385ELI_08385ELI_08385ELI_08385
EFER585054 EFER_4370EFER_2098EFER_0415EFER_0415EFER_1385
ECOO157 YHAJYEEYYBBSZ0405YDHB
ECOL83334 ECS3987ECS2817ECS0565ECS0365ECS2368
ECOL585397 ECED1_3772ECED1_2366ECED1_0525ECED1_0525ECED1_1858
ECOL585057 ECIAI39_3606ECIAI39_1001ECIAI39_0370ECIAI39_0370ECIAI39_1397
ECOL585056 ECUMN_3591ECUMN_2359ECUMN_0545ECUMN_0355ECUMN_1949
ECOL585055 EC55989_3523EC55989_2274EC55989_0519EC55989_0319EC55989_1827
ECOL585035 ECS88_3500ECS88_2114ECS88_0503ECS88_0325ECS88_1708
ECOL585034 ECIAI1_3255ECIAI1_2085ECIAI1_0507ECIAI1_0314ECIAI1_1711
ECOL481805 ECOLC_0591ECOLC_1625ECOLC_3118ECOLC_3307ECOLC_1970
ECOL469008 ECBD_0633ECBD_1642ECBD_3153ECBD_3341ECBD_1984
ECOL439855 ECSMS35_3403ECSMS35_1044ECSMS35_0547ECSMS35_0347ECSMS35_1539
ECOL413997 ECB_02974ECB_01918ECB_00454ECB_00272ECB_01630
ECOL409438 ECSE_3391ECSE_2288ECSE_0530ECSE_0337ECSE_1783
ECOL405955 APECO1_3316APECO1_1112APECO1_1510APECO1_1674APECO1_739
ECOL364106 UTI89_C3542UTI89_C2288UTI89_C0533UTI89_C0345UTI89_C1850
ECOL362663 ECP_3200ECP_2058ECP_0565ECP_0392ECP_1606
ECOL331111 ECE24377A_3580ECE24377A_2306ECE24377A_0541ECE24377A_0334ECE24377A_1872
ECOL316407 ECK3096:JW3076:B3105ECK2009:JW5834:B2015ECK0497:JW0492:B0504ECK0314:JW0308:B0316ECK1655:JW1651:B1659
ECOL199310 C3863C2542C0619C0436C2053
ECAR218491 ECA0634ECA0634ECA0634ECA0634ECA0634
DDES207559 DDE_0349DDE_0349DDE_0349DDE_0349
DARO159087 DARO_0552DARO_0552DARO_0552DARO_0552DARO_0552
CVIO243365 CV_3626CV_3626CV_3626CV_3626CV_3626
CSAL290398 CSAL_1136CSAL_1136CSAL_1136CSAL_1136CSAL_1136
CPSY167879 CPS_1769CPS_1769CPS_1769CPS_1769CPS_1769
CJAP155077 CJA_3609CJA_3609CJA_3609CJA_3609CJA_3609
BXEN266265 BXE_B2375BXE_B2375BXE_B2375BXE_B2375BXE_B2375
BVIE269482 BCEP1808_6369BCEP1808_5673BCEP1808_6369BCEP1808_6369BCEP1808_5673
BSP36773 BCEP18194_A4973BCEP18194_A4973BCEP18194_B3032BCEP18194_B3032BCEP18194_B3032
BPET94624 BPET2277BPET2277BPET2277BPET2277BPET2277
BPER257313 BP1599BP1599BP1599BP1599BP1599
BPAR257311 BPP2985BPP2985BPP2985BPP2985BPP2985
BCEN331272 BCEN2424_5934BCEN2424_6369BCEN2424_5934BCEN2424_5934BCEN2424_5934
BCEN331271 BCEN_5569BCEN_1459BCEN_5569BCEN_5569BCEN_5569
BBRO257310 BB2951BB2951BB2951BB2951BB2951
BAMB398577 BAMMC406_5596BAMMC406_4888BAMMC406_5596BAMMC406_4888BAMMC406_4888
BAMB339670 BAMB_5812BAMB_4371BAMB_5812BAMB_5812BAMB_4371
ASP62928 AZO2967AZO2967AZO2967AZO2967AZO2967
ASP232721 AJS_1984AJS_1984AJS_1984AJS_1984AJS_1984
ASAL382245 ASA_3497ASA_3497ASA_2727ASA_3497ASA_2339
AHYD196024 AHA_3980AHA_3980AHA_3980AHA_3980AHA_3980
ACAU438753 AZC_4123AZC_4123AZC_4123AZC_4123
ABOR393595 ABO_0028ABO_0028ABO_0028ABO_0028
ABAU360910 BAV1928BAV1928BAV1928BAV1928BAV1928
AAVE397945 AAVE_3030AAVE_3030AAVE_0757AAVE_3030AAVE_0757


Organism features enriched in list (features available for 136 out of the 143 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0000640892
Disease:Bubonic_plague 0.000147966
Disease:Dysentery 0.000147966
Disease:Gastroenteritis 0.00004981013
Endospores:No 0.000027530211
Endospores:Yes 6.476e-6153
GC_Content_Range4:0-40 1.138e-282213
GC_Content_Range4:40-60 5.687e-879224
GC_Content_Range4:60-100 1.858e-655145
GC_Content_Range7:30-40 2.185e-202166
GC_Content_Range7:50-60 2.278e-848107
GC_Content_Range7:60-70 7.004e-855134
Genome_Size_Range5:2-4 4.739e-1610197
Genome_Size_Range5:4-6 1.006e-32101184
Genome_Size_Range5:6-10 2.560e-62547
Genome_Size_Range9:2-3 2.051e-132120
Genome_Size_Range9:3-4 0.0012338877
Genome_Size_Range9:4-5 8.307e-125096
Genome_Size_Range9:5-6 1.190e-145188
Genome_Size_Range9:6-8 1.706e-62238
Gram_Stain:Gram_Neg 6.136e-25126333
Habitat:Multiple 0.000050360178
Motility:No 2.636e-136151
Motility:Yes 1.576e-17105267
Optimal_temp.:20-30 0.008190157
Optimal_temp.:25-30 0.00015871219
Oxygen_Req:Anaerobic 7.694e-103102
Oxygen_Req:Facultative 2.513e-976201
Pathogenic_in:Plant 0.0081518815
Shape:Coccus 2.187e-7382
Shape:Rod 2.701e-20124347
Temp._range:Mesophilic 0.0023735121473
Temp._range:Psychrophilic 0.005766269
Temp._range:Thermophilic 0.0007633135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 468
Effective number of orgs (counting one per cluster within 468 clusters): 365

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA21
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP266779 ncbi Chelativorans sp. BNC11
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2641
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1681
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102471
BMAL320388 ncbi Burkholderia mallei SAVP11
BMAL243160 ncbi Burkholderia mallei ATCC 233441
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7619   G7088   G6274   G6181   EG12140   
ZMOB264203
XFAS405440
XFAS183190
XFAS160492
XAUT78245
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221 TLL1359
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332 CYB_2296
SSP321327 CYA_2417
SSP1148
SSP1131
SSOL273057
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SLAC55218
SHAE279808
SGOR29390
SFUM335543
SERY405948
SEPI176280
SEPI176279
SELO269084
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH272943 RSP_2027
RSP357808
RSP101510 RHA1_RO05127
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058 RPB_1500
RPAL316057
RPAL316055
RMAS416276
RFEL315456
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSP56811
PSP312153
PSP117
PRUM264731
PPEN278197
PMUL272843
PMOB403833
PMAR93060
PMAR74547 PMT2007
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PCAR338963
PAST100379
PARS340102
PARC259536
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
OCAR504832
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NFAR247156
NEUT335283
NEUR228410
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732 MOTH_1825
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988 MS2143
MSTA339860
MSP409
MSP266779 MESO_2973
MSP189918
MSP164757
MSP164756
MSME246196 MSMEG_1909
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_1356
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967 LSEI_0126
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
IHOS453591
HWAL362976
HSP64091
HSOM228400 HSM_1538
HSOM205914 HS_1054
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930 CGSHIEE_08960
HINF281310
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HAUR316274
HACI382638
GVIO251221
GURA351605
GTHE420246
GSUL243231 GSU_2523
GOXY290633
GMET269799
GKAU235909
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119 DSY5013
DGEO319795 DGEO_2840
DETH243164
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78
CSP501479
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_1757
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974 DAUD_1988
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922 COXBU7E912_0808
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402
CACE272562 CAC3409
CABO218497
BWEI315730 BCERKBAB4_2536
BTUR314724
BTRI382640
BTHU412694
BTHU281309
BTHE226186
BTHA271848 BTH_I0943
BSUI470137
BSUI204722
BSUB BSU38310
BSP376
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPSE272560
BOVI236
BMEL359391
BMEL224914
BMAL320389 BMA10247_2083
BMAL320388 BMASAVP1_A0697
BMAL243160 BMA_2212
BLON206672
BLIC279010
BJAP224911
BHER314723
BHEN283166
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BCAN483179
BBUR224326
BBAC360095
BBAC264462 BD3229
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62977
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABAC204669
AAUR290340
AAEO224324


Organism features enriched in list (features available for 435 out of the 468 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00012348292
Arrangment:Clusters 0.00634901717
Disease:Gastroenteritis 0.0001100313
Endospores:No 2.257e-6180211
Endospores:Yes 1.566e-65253
GC_Content_Range4:0-40 4.897e-26207213
GC_Content_Range4:40-60 2.157e-7141224
GC_Content_Range4:60-100 1.138e-686145
GC_Content_Range7:0-30 5.373e-74747
GC_Content_Range7:30-40 1.484e-17160166
GC_Content_Range7:50-60 4.359e-955107
GC_Content_Range7:60-70 3.223e-875134
Genome_Size_Range5:0-2 2.756e-24155155
Genome_Size_Range5:2-4 2.553e-13181197
Genome_Size_Range5:4-6 2.158e-3278184
Genome_Size_Range5:6-10 3.533e-62147
Genome_Size_Range9:0-1 0.00029782727
Genome_Size_Range9:1-2 1.673e-19128128
Genome_Size_Range9:2-3 1.051e-13117120
Genome_Size_Range9:4-5 7.584e-134296
Genome_Size_Range9:5-6 1.474e-133688
Genome_Size_Range9:6-8 1.712e-61538
Gram_Stain:Gram_Neg 1.842e-27196333
Gram_Stain:Gram_Pos 2.258e-23150150
Habitat:Multiple 0.0000555114178
Habitat:Specialized 0.00507434753
Motility:No 3.757e-14144151
Motility:Yes 3.339e-19153267
Optimal_temp.:25-30 0.0003767719
Optimal_temp.:30-37 0.00468881818
Oxygen_Req:Anaerobic 4.718e-1199102
Oxygen_Req:Facultative 5.973e-8123201
Pathogenic_in:Plant 0.0034181615
Shape:Coccus 2.650e-87982
Shape:Irregular_coccus 0.00634901717
Shape:Rod 1.752e-22212347
Shape:Spiral 0.00003373434
Temp._range:Hyperthermophilic 0.00102042323
Temp._range:Mesophilic 0.0011410341473
Temp._range:Psychrophilic 0.008905939
Temp._range:Thermophilic 0.00031753435



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951280.6852
GLYCOCAT-PWY (glycogen degradation I)2461370.6288
AST-PWY (arginine degradation II (AST pathway))120900.6045
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181230.5839
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149980.5709
PWY-5148 (acyl-CoA hydrolysis)2271240.5702
TYRFUMCAT-PWY (tyrosine degradation I)1841080.5502
PWY-5918 (heme biosynthesis I)2721330.5431
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001390.5358
PWY-4041 (γ-glutamyl cycle)2791330.5293
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251180.5273
GLUCONSUPER-PWY (D-gluconate degradation)2291190.5259
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861340.5236
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491240.5209
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491240.5209
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961360.5202
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901340.5160
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911060.5146
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911340.5141
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761000.5053
PWY-1269 (CMP-KDO biosynthesis I)3251400.4997
PWY0-981 (taurine degradation IV)106730.4944
GALACTITOLCAT-PWY (galactitol degradation)73580.4895
LIPASYN-PWY (phospholipases)2121090.4861
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94670.4844
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391410.4843
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001320.4823
PWY-5386 (methylglyoxal degradation I)3051330.4810
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121080.4780
GLUCARDEG-PWY (D-glucarate degradation I)152880.4720
PWY0-1182 (trehalose degradation II (trehalase))70550.4705
PWY-5913 (TCA cycle variation IV)3011300.4652
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96660.4648
PWY-46 (putrescine biosynthesis III)138820.4626
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481400.4621
PWY-6087 (4-chlorocatechol degradation)2231080.4523
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135790.4448
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138800.4442
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))183950.4441
P344-PWY (acrylonitrile degradation)2101030.4425
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291330.4395
PWY-6196 (serine racemization)102660.4393
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81570.4359
LACTOSEUTIL-PWY (lactose degradation II)53440.4355
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112690.4303
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135770.4263
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))191950.4235
GALACTARDEG-PWY (D-galactarate degradation I)151820.4217
PWY-3162 (tryptophan degradation V (side chain pathway))94610.4204
P601-PWY (D-camphor degradation)95610.4161
PWY-561 (superpathway of glyoxylate cycle)162850.4161
GLYOXYLATE-BYPASS (glyoxylate cycle)169870.4139
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651370.4124
PWY-6193 (3-chlorocatechol degradation II (ortho))194940.4078
GLUTAMINDEG-PWY (glutamine degradation I)191930.4070
PWY-5028 (histidine degradation II)130730.4054
PWY0-1337 (oleate β-oxidation)199950.4038
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2901190.4012
THREONINE-DEG2-PWY (threonine degradation II)214990.4009



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7088   G6274   G6181   EG12140   
G76190.9997780.9995840.9996470.999656
G70880.9995230.9995890.999657
G62740.9997670.999731
G61810.999738
EG12140



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PAIRWISE BLAST SCORES:

  G7619   G7088   G6274   G6181   EG12140   
G76190.0f02.5e-454.8e-199.1e-256.0e-28
G70882.5e-450.0f04.4e-256.7e-291.7e-32
G62744.8e-194.4e-250.0f06.1e-511.1e-35
G61815.2e-224.4e-253.5e-480.0f09.7e-37
EG121406.0e-281.7e-321.1e-351.9e-400.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7619 (centered at G7619)
G7088 (centered at G7088)
G6274 (centered at G6274)
G6181 (centered at G6181)
EG12140 (centered at EG12140)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7619   G7088   G6274   G6181   EG12140   
154/623154/623148/623160/623153/623
AAVE397945:0:Tyes22422242022420
ABAU360910:0:Tyes00000
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