CANDIDATE ID: 189

CANDIDATE ID: 189

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9977080e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11028 (trpE) (b1264)
   Products of gene:
     - ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
     - ANTHRANSYN-CPLX (anthranilate synthase)
       Reactions:
        chorismate + L-glutamine  ->  anthranilate + pyruvate + L-glutamate + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         PWY-5958 (PWY-5958)
         TRPSYN-PWY (tryptophan biosynthesis)

- EG11027 (trpD) (b1263)
   Products of gene:
     - ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
       Reactions:
        anthranilate + 5-phospho-alpha-D-ribose 1-diphosphate  ->  N-(5'-phosphoribosyl)-anthranilate + diphosphate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)
     - ANTHRANSYN-CPLX (anthranilate synthase)
       Reactions:
        chorismate + L-glutamine  ->  anthranilate + pyruvate + L-glutamate + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         PWY-5958 (PWY-5958)
         TRPSYN-PWY (tryptophan biosynthesis)

- EG11026 (trpC) (b1262)
   Products of gene:
     - PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
       Reactions:
        1-(o-carboxyphenylamino)-1'-deoxyribulose-5'-phosphate + H+  ->  indole-3-glycerol-phosphate + CO2 + H2O
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)
        N-(5'-phosphoribosyl)-anthranilate  ->  1-(o-carboxyphenylamino)-1'-deoxyribulose-5'-phosphate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)

- EG11025 (trpB) (b1261)
   Products of gene:
     - TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
     - CPLX0-2401 (tryptophan synthase, β subunit dimer)
       Reactions:
        indole + L-serine  ->  L-tryptophan + H2O
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)
     - TRYPSYN (tryptophan synthase)
       Reactions:
        indole-3-glycerol-phosphate + L-serine  ->  L-tryptophan + D-glyceraldehyde-3-phosphate + H2O

- EG11024 (trpA) (b1260)
   Products of gene:
     - TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
       Reactions:
        indole-3-glycerol-phosphate  =  indole + D-glyceraldehyde-3-phosphate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         TRPSYN-PWY (tryptophan biosynthesis)
     - TRYPSYN (tryptophan synthase)
       Reactions:
        indole-3-glycerol-phosphate + L-serine  ->  L-tryptophan + D-glyceraldehyde-3-phosphate + H2O



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 355
Effective number of orgs (counting one per cluster within 468 clusters): 268

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py25
WSUC273121 ncbi Wolinella succinogenes DSM 17404
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
UMET351160 ncbi uncultured methanogenic archaeon RC-I4
TTUR377629 ncbi Teredinibacter turnerae T79015
TTHE300852 ncbi Thermus thermophilus HB85
TTHE262724 ncbi Thermus thermophilus HB274
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.5
TROS309801 ncbi Thermomicrobium roseum DSM 51595
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TKOD69014 ncbi Thermococcus kodakarensis KOD14
TERY203124 ncbi Trichodesmium erythraeum IMS1015
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP94122 ncbi Shewanella sp. ANA-35
SSP84588 ncbi Synechococcus sp. WH 81025
SSP64471 ncbi Synechococcus sp. CC93115
SSP644076 Silicibacter sp. TrichCH4B5
SSP387093 ncbi Sulfurovum sp. NBC37-14
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)5
SSP321327 ncbi Synechococcus sp. JA-3-3Ab5
SSP292414 ncbi Ruegeria sp. TM10405
SSP1148 ncbi Synechocystis sp. PCC 68035
SSP1131 Synechococcus sp. CC96055
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705854
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-64
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-144
SPNE170187 ncbi Streptococcus pneumoniae G544
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMUT210007 ncbi Streptococcus mutans UA1594
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB5
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSP357808 ncbi Roseiflexus sp. RS-15
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
RCAS383372 ncbi Roseiflexus castenholzii DSM 139415
RALB246199 Ruminococcus albus 85
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PSP117 Pirellula sp.5
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMOB403833 ncbi Petrotoga mobilis SJ954
PMEN399739 ncbi Pseudomonas mendocina ymp5
PMAR93060 ncbi Prochlorococcus marinus MIT 92154
PMAR74547 ncbi Prochlorococcus marinus MIT 93135
PMAR74546 ncbi Prochlorococcus marinus MIT 93124
PMAR59920 ncbi Prochlorococcus marinus NATL2A5
PMAR167555 ncbi Prochlorococcus marinus NATL1A5
PMAR167546 ncbi Prochlorococcus marinus MIT 93014
PMAR167542 ncbi Prochlorococcus marinus MIT 95154
PMAR167540 Prochlorococcus marinus pastoris MED4ax4
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13755
PMAR146891 ncbi Prochlorococcus marinus AS96014
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71205
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16224
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H4
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS105
MMAR368407 ncbi Methanoculleus marisnigri JR14
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MLAB410358 ncbi Methanocorpusculum labreanum Z5
MKAN190192 ncbi Methanopyrus kandleri AV194
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26615
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MBAR269797 ncbi Methanosarcina barkeri Fusaro4
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82934
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LLAC272622 ncbi Lactococcus lactis cremoris SK114
LINN272626 ncbi Listeria innocua Clip112624
LCHO395495 ncbi Leptothrix cholodnii SP-65
LCAS321967 ncbi Lactobacillus casei ATCC 3344
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HPYL85963 ncbi Helicobacter pylori J995
HPYL357544 ncbi Helicobacter pylori HPAG15
HPY ncbi Helicobacter pylori 266955
HNEP81032 Hyphomonas neptunium5
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HARS204773 ncbi Herminiimonas arsenicoxydans5
HACI382638 ncbi Helicobacter acinonychis Sheeba5
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2004
FSP1855 Frankia sp. EAN1pec4
FSP106370 ncbi Frankia sp. CcI34
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
FALN326424 ncbi Frankia alni ACN14a4
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSP255470 ncbi Dehalococcoides sp. CBDB14
DSP216389 ncbi Dehalococcoides sp. BAV14
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DRED349161 ncbi Desulfotomaculum reducens MI-15
DRAD243230 ncbi Deinococcus radiodurans R14
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DETH243164 ncbi Dehalococcoides ethenogenes 1954
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA5
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)5
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPHY357809 ncbi Clostridium phytofermentans ISDg5
CKLU431943 ncbi Clostridium kluyveri DSM 5555
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130325
CEFF196164 ncbi Corynebacterium efficiens YS-3145
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131295
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBLO203907 ncbi Candidatus Blochmannia floridanus5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB155
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.5
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)4
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294135
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
ANAE240017 Actinomyces oris MG15
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AMAR329726 ncbi Acaryochloris marina MBIC110175
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF55


Names of the homologs of the genes in the group in each of these orgs
  EG11028   EG11027   EG11026   EG11025   EG11024   
ZMOB264203 ZMO0468ZMO0545ZMO0585ZMO0584
YPSE349747 YPSIP31758_1932YPSIP31758_1934YPSIP31758_1935YPSIP31758_1936YPSIP31758_1937
YPSE273123 YPTB2130YPTB2128YPTB2127YPTB2126YPTB2125
YPES386656 YPDSF_0925YPDSF_0927YPDSF_0928YPDSF_0929YPDSF_0930
YPES377628 YPN_1677YPN_1675YPN_1674YPN_1673YPN_1672
YPES360102 YPA_1568YPA_1566YPA_1565YPA_1564YPA_1563
YPES349746 YPANGOLA_A2312YPANGOLA_A2314YPANGOLA_A2315YPANGOLA_A2321YPANGOLA_A2317
YPES214092 YPO2208YPO2206YPO2205YPO2204YPO2203
YPES187410 Y2051Y2049Y2048Y2047
YENT393305 YE2209YE2211YE2212YE2213YE2214
XORY360094 XOOORF_0825XOOORF_0642XOOORF_0643XOOORF_3610XOOORF_3608
XORY342109 XOO3824XOO3936XOO3935XOO3080XOO3079
XORY291331 XOO4049XOO4161XOO4160XOO3252XOO3251
XFAS405440 XFASM12_0179XFASM12_0181XFASM12_0182XFASM12_0729
XFAS183190 PD_0170PD_0172PD_0173PD_0613
XFAS160492 XF0210XF0212XF0213XF1375XF1376
XCAM487884 XCC-B100_0494XCC-B100_0499XCC-B100_0500XCC-B100_1619XCC-B100_1621
XCAM316273 XCAORF_4048XCAORF_4043XCAORF_4042XCAORF_2875XCAORF_2873
XCAM314565 XC_0473XC_0483XC_0484XC_1575XC_1577
XCAM190485 XCC0459XCC0469XCC0470XCC2543XCC2541
XAXO190486 XAC0476XAC0480XAC0481XAC2717XAC2716
XAUT78245 XAUT_4378XAUT_4376XAUT_4375XAUT_1693XAUT_1695
WSUC273121 WS0088WS1912WS1351WS1827
VVUL216895 VV1_3064VV1_3066VV1_3067VV1_3068VV1_3069
VVUL196600 VV1221VV1219VV1218VV1217VV1216
VPAR223926 VP1956VP1958VP1959VP1960VP1961
VFIS312309 VF1033VF1032VF1029VF1028VF1027
VEIS391735 VEIS_1212VEIS_1210VEIS_1209VEIS_4868VEIS_4867
VCHO345073 VC0395_A0796VC0395_A0794VC0395_A0793VC0395_A0792VC0395_A0791
VCHO VC1174VC1172VC1171VC1170VC1169
UMET351160 RCIX797RCIX796RCIX794RCIX793
TTUR377629 TERTU_3137TERTU_3128TERTU_3127TERTU_2495TERTU_2494
TTHE300852 TTHA1844TTHA1842TTHA1164TTHA1095TTHA1094
TTHE262724 TT_C1493TT_C1491TT_C0730TT_C0729
TTEN273068 TTE1583TTE1581TTE1580TTE1578TTE1577
TSP1755 TETH514_1869TETH514_1867TETH514_1866TETH514_1864TETH514_1863
TROS309801 TRD_0102TRD_0104TRD_0105TRD_0107TRD_0108
TPSE340099 TETH39_0888TETH39_0890TETH39_0891TETH39_0893TETH39_0894
TKOD69014 TK0254TK0253TK0257TK0258
TERY203124 TERY_3792TERY_2308TERY_3169TERY_0581TERY_4493
TELO197221 TLL1672TLL0698TLL2475TLL0439
TDEN292415 TBD_2228TBD_2223TBD_2222TBD_1914TBD_1913
TCRU317025 TCR_0266TCR_0268TCR_0269TCR_0803TCR_0804
STYP99287 STM1723STM1724STM1725STM1726STM1727
STHE292459 STH1407STH1409STH1412STH1414STH1415
SSP94122 SHEWANA3_1520SHEWANA3_1518SHEWANA3_1517SHEWANA3_1516SHEWANA3_1515
SSP84588 SYNW2045OR2765SYNW1025OR0047SYNW1629OR3078SYNW2280OR2578SYNW1519OR3160
SSP64471 GSYN0484GSYN1754GSYN0794GSYN2779GSYN2036
SSP644076 SCH4B_4617SCH4B_4613SCH4B_4611SCH4B_0904SCH4B_0915
SSP387093 SUN_0471SUN_1695SUN_0653SUN_2098
SSP321332 CYB_0535CYB_0050CYB_2343CYB_1508CYB_0937
SSP321327 CYA_2136CYA_0630CYA_2369CYA_0339CYA_1290
SSP292414 TM1040_1143TM1040_1140TM1040_1138TM1040_0206TM1040_0222
SSP1148 SLR0738SLR1867SLR0546SLR0543SLR0966
SSP1131 SYNCC9605_0398SYNCC9605_1151SYNCC9605_0870SYNCC9605_2418SYNCC9605_0990
SSON300269 SSO_1879SSO_1880SSO_1881SSO_1882SSO_1883
SSED425104 SSED_1686SSED_1684SSED_1683SSED_1682SSED_1681
SPRO399741 SPRO_2667SPRO_2669SPRO_2670SPRO_2671SPRO_2672
SPNE488221 SP70585_1878SP70585_1876SP70585_1875SP70585_1873
SPNE487214 SPH_1939SPH_1937SPH_1936SPH_1934
SPNE487213 SPT_1740SPT_1738SPT_1737SPT_1735
SPNE170187 SPN02126SPN02124SPN02123SPN02120
SPEA398579 SPEA_1590SPEA_1588SPEA_1587SPEA_1586SPEA_1585
SONE211586 SO_3019SO_3021SO_3022SO_3023SO_3024
SMUT210007 SMU_532SMU_534SMU_535SMU_537
SMEL266834 SMC00235SMC00236SMC02766SMC02765
SMED366394 SMED_1408SMED_1409SMED_3237SMED_3238
SLOI323850 SHEW_2251SHEW_2253SHEW_2254SHEW_2255SHEW_2256
SLAC55218 SL1157_2768SL1157_2765SL1157_2764SL1157_0261SL1157_0255
SHIGELLA TRPETRPDTRPCTRPBTRPA
SHAL458817 SHAL_1658SHAL_1656SHAL_1655SHAL_1654SHAL_1653
SGLO343509 SG1402SG1400SG1399SG1398SG1397
SFUM335543 SFUM_1776SFUM_1774SFUM_1771SFUM_1770
SFLE373384 SFV_1278SFV_1277SFV_1276SFV_1275SFV_1274
SFLE198214 AAN42880.1AAN42879.1AAN42878.1AAN42877.1AAN42876.1
SENT454169 SEHA_C1913SEHA_C1914SEHA_C1915SEHA_C1916SEHA_C1917
SENT321314 SCH_1719SCH_1720SCH_1721SCH_1722SCH_1723
SENT295319 SPA1154SPA1153SPA1152SPA1151SPA1150
SENT220341 STY1328STY1327STY1325STY1324
SENT209261 T1635T1636T1637T1638T1639
SELO269084 SYC0542_CSYC1969_DSYC0353_DSYC1948_CSYC1106_D
SDYS300267 SDY_1332SDY_1331SDY_1330SDY_1329SDY_1328
SDEN318161 SDEN_2450SDEN_2452SDEN_2453SDEN_2454SDEN_2455
SDEG203122 SDE_0747SDE_0753SDE_0754SDE_2079SDE_2078
SCO SCO2043SCO3212SCO3211SCO2037SCO2036
SBOY300268 SBO_1802SBO_1803SBO_1804SBO_1805SBO_1806
SBAL402882 SHEW185_2722SHEW185_2724SHEW185_2725SHEW185_2726SHEW185_2727
SBAL399599 SBAL195_2801SBAL195_2803SBAL195_2804SBAL195_2805SBAL195_2806
SAVE227882 SAV6171SAV6175SAV6177SAV6178
SALA317655 SALA_1174SALA_0835SALA_1064SALA_1063
SACI56780 SYN_01947SYN_01945SYN_01944SYN_01942SYN_01941
RXYL266117 RXYL_2115RXYL_2095RXYL_2094RXYL_2090RXYL_2089
RSPH349102 RSPH17025_3101RSPH17025_3098RSPH17025_3097RSPH17025_3887RSPH17025_0349
RSPH349101 RSPH17029_0714RSPH17029_0711RSPH17029_0710RSPH17029_3270RSPH17029_2489
RSPH272943 RSP_2004RSP_2001RSP_6214RSP_3585RSP_0831
RSP357808 ROSERS_1455ROSERS_1452ROSERS_1252ROSERS_2521ROSERS_2950
RSOL267608 RSC2881RSP0681RSP0680RSC1983RSC1981
RRUB269796 RRU_A1891RRU_A1896RRU_A1897RRU_A3427RRU_A3428
RPOM246200 SPO_2146SPO_2150SPO_2151SPO_0808SPO_0815
RPAL316058 RPB_2797RPB_2798RPB_0635RPB_0634
RPAL316057 RPD_2828RPD_2829RPD_0197RPD_0198
RPAL316056 RPC_2467RPC_2466RPC_0392RPC_0391
RPAL316055 RPE_2591RPE_2590RPE_0454RPE_0455
RPAL258594 RPA2890RPA2891RPA0069RPA0070
RMET266264 RMET_3178RMET_3180RMET_3181RMET_2467RMET_2465
RLEG216596 RL2493RL2494RL0021RL0022
RFER338969 RFER_3607RFER_3602RFER_3601RFER_1787
REUT381666 H16_A3319H16_A3321H16_A3322H16_A2614H16_A2612
REUT264198 REUT_A3023REUT_A3025REUT_A3026REUT_A2306REUT_A2304
RETL347834 RHE_CH02174RHE_CH02175RHE_CH00021RHE_CH00022
RDEN375451 RD1_3205RD1_3210RD1_3213RD1_3906RD1_3895
RCAS383372 RCAS_2156RCAS_2153RCAS_2858RCAS_2763RCAS_1948
RALB246199 GRAORF_1644GRAORF_1643GRAORF_1642GRAORF_1641GRAORF_1640
PTHE370438 PTH_1628PTH_1626PTH_1625PTH_1624PTH_1623
PSYR223283 PSPTO_0568PSPTO_0594PSPTO_0158PSPTO_0159
PSYR205918 PSYR_4609PSYR_4580PSYR_0756PSYR_0034PSYR_0033
PSTU379731 PST_0744PST_0746PST_0747PST_2895PST_2896
PSP56811 PSYCPRWF_1647PSYCPRWF_1648PSYCPRWF_0755PSYCPRWF_0756
PSP312153 PNUC_0148PNUC_0146PNUC_0145PNUC_0772PNUC_0773
PSP296591 BPRO_4457BPRO_4452BPRO_4451BPRO_3616BPRO_3617
PSP117 RB7967RB410RB10114RB10650RB5560
PPUT76869 PPUTGB1_0448PPUTGB1_0451PPUTGB1_0452PPUTGB1_0098PPUTGB1_0097
PPUT351746 PPUT_0451PPUT_0454PPUT_0455PPUT_0098PPUT_0097
PPUT160488 PP_0417PP_0421PP_0422PP_0083PP_0082
PPRO298386 PBPRA2486PBPRA2488PBPRA2489PBPRA2490PBPRA2491
PNAP365044 PNAP_3654PNAP_3650PNAP_3649PNAP_3046PNAP_3047
PMUL272843 PM0584PM0581PM0580PM0578PM0577
PMOB403833 PMOB_1211PMOB_1210PMOB_1208PMOB_1207
PMEN399739 PMEN_3997PMEN_3945PMEN_3944PMEN_0071PMEN_0070
PMAR93060 P9215_09391P9215_15251P9215_01821P9215_06541
PMAR74547 PMT1711PMT0654PMT0336PMT2027PMT0465
PMAR74546 PMT9312_1669PMT9312_1393PMT9312_0166PMT9312_0572
PMAR59920 PMN2A_1149PMN2A_0258PMN2A_0863PMN2A_1531PMN2A_0008
PMAR167555 NATL1_20231NATL1_09271NATL1_17161NATL1_02381NATL1_06271
PMAR167546 P9301ORF_0924P9301ORF_1506P9301ORF_0186P9301ORF_0613
PMAR167542 P9515ORF_1082P9515ORF_1522P9515ORF_0200P9515ORF_0673
PMAR167540 PMM0952PMM1297PMM0164PMM0572
PMAR167539 PRO_1732PRO_0744PRO_1371PRO_0188PRO_0574
PMAR146891 A9601_09081A9601_14961A9601_01821A9601_06281
PLUM243265 PLU2462PLU2464PLU2465PLU2466PLU2467
PING357804 PING_1060PING_1058PING_1057PING_1056PING_1055
PHAL326442 PSHAA1293PSHAA1291PSHAA1290PSHAA1289PSHAA1288
PFLU220664 PFL_5629PFL_5621PFL_0037PFL_0036
PFLU216595 PFLU5561PFLU5558PFLU0036PFLU0035
PFLU205922 PFL_5118PFL_5113PFL_0103PFL_0104
PENT384676 PSEEN0444PSEEN0448PSEEN0449PSEEN0038PSEEN0037
PCRY335284 PCRYO_1442PCRYO_1443PCRYO_0467PCRYO_0468
PCAR338963 PCAR_0730PCAR_0732PCAR_0733PCAR_2241
PATL342610 PATL_2829PATL_2831PATL_2832PATL_2833PATL_2834
PARC259536 PSYC_0973PSYC_0972PSYC_0432PSYC_0433
PAER208964 PA1001PA0650PA0651PA0036PA0035
PAER208963 PA14_51360PA14_08350PA14_08360PA14_00450PA14_00440
OIHE221109 OB0527OB0525OB0524OB0522OB0521
OCAR504832 OCAR_6304OCAR_6305OCAR_4477OCAR_4478
OANT439375 OANT_2049OANT_2048OANT_0810OANT_0812
NWIN323098 NWI_1837NWI_1838NWI_0055NWI_0054
NSP103690 ALL0328ALR1153ALR4746ALL3794ALR4811
NOCE323261 NOC_2494NOC_2496NOC_2497NOC_1020NOC_1021
NMUL323848 NMUL_A2369NMUL_A2563NMUL_A2562NMUL_A1912NMUL_A1911
NMEN374833 NMCC_0965NMCC_0910NMCC_1870NMCC_0658NMCC_0634
NMEN272831 NMC1013NMC0948NMC0270NMC0650NMC0628
NMEN122587 NMA1247NMA1164NMA2212NMA0904NMA0879
NMEN122586 NMB_1021NMB_0967NMB_0275NMB_0699NMB_0678
NHAM323097 NHAM_1734NHAM_1733NHAM_0063NHAM_0062
NGON242231 NGO0872NGO1203NGO1721NGO0274NGO0248
NEUT335283 NEUT_2098NEUT_0134NEUT_1152NEUT_1153
NEUR228410 NE2150NE0013NE0012NE0693NE0694
NARO279238 SARO_2021SARO_2023SARO_2024SARO_1302SARO_1301
MXAN246197 MXAN_6072MXAN_6062MXAN_6065MXAN_6066
MTHE264732 MOTH_1342MOTH_1340MOTH_1339MOTH_1337MOTH_1336
MTHE187420 MTH1655MTH1661MTH1659MTH1660
MSUC221988 MS1149MS1151MS1152MS1153MS1154
MSP409 M446_5398M446_5395M446_5394M446_2507M446_0477
MSP400668 MMWYL1_1062MMWYL1_1063MMWYL1_2042MMWYL1_2043
MSP266779 MESO_1638MESO_1639MESO_0666MESO_0664
MPET420662 MPE_A3463MPE_A3461MPE_A3460MPE_A2157MPE_A2156
MMAR394221 MMAR10_1403MMAR10_1400MMAR10_1399MMAR10_0093MMAR10_0090
MMAR368407 MEMAR_0071MEMAR_0073MEMAR_0076MEMAR_0077
MMAG342108 AMB1813AMB2862AMB2863AMB4010AMB4011
MLOT266835 MLR0614MLR0615MLR5071MLR5073
MLAB410358 MLAB_1399MLAB_1397MLAB_1396MLAB_1394MLAB_1393
MKAN190192 MK0437MK1391MK0784MK0403
MJAN243232 MJ_1075MJ_0234MJ_0918MJ_1037MJ_1038
MFLA265072 MFLA_2471MFLA_2467MFLA_2465MFLA_1698MFLA_1697
MEXT419610 MEXT_4668MEXT_4671MEXT_4672MEXT_0176MEXT_4446
MCAP243233 MCA_2584MCA_2586MCA_2587MCA_2495MCA_2494
MBAR269797 MBAR_A3626MBAR_A3624MBAR_A3622MBAR_A3623
MAQU351348 MAQU_3517MAQU_3519MAQU_3520MAQU_1558MAQU_1557
MAER449447 MAE_23290MAE_45030MAE_17780MAE_20980
LWEL386043 LWE1649LWE1647LWE1646LWE1644LWE1643
LPNE400673 LPC_2461LPC_2462LPC_0729LPC_0730
LPNE297246 LPP0896LPP0895LPP1268LPP1269
LPNE297245 LPL0865LPL0864LPL1267LPL1268
LPNE272624 LPG0834LPG0833LPG1304LPG1305
LMES203120 LEUM_1171LEUM_1175LEUM_1174LEUM_1172
LLAC272623 L0054L0052L0049L0048
LLAC272622 LACR_1560LACR_1558LACR_1549LACR_1548
LINN272626 LIN1674LIN1672LIN1671LIN1669
LCHO395495 LCHO_3897LCHO_3877LCHO_3876LCHO_1682LCHO_1683
LCAS321967 LSEI_0078LSEI_0077LSEI_0075LSEI_0074
KPNE272620 GKPORF_B0277GKPORF_B0276GKPORF_B0275GKPORF_B0274GKPORF_B0273
JSP375286 MMA_0235MMA_0233MMA_0232MMA_2164MMA_2163
JSP290400 JANN_1882JANN_1879JANN_1877JANN_3589JANN_3584
ILOI283942 IL1751IL1753IL1754IL1755IL1756
HSOM228400 HSM_1315HSM_1313HSM_1312HSM_1311HSM_1310
HPYL85963 JHP1203JHP1201JHP1200JHP1199JHP1198
HPYL357544 HPAG1_1230HPAG1_1232HPAG1_1233HPAG1_1234HPAG1_1235
HPY HP1282HP1281HP1279HP1278HP1277
HNEP81032 HNE_1790HNE_1788HNE_1787HNE_3476HNE_3474
HMOD498761 HM1_1916HM1_1918HM1_1921HM1_1922
HINF71421 HI_1387HI_1389HI_1389.1HI_1431HI_1432
HINF374930 CGSHIEE_04490CGSHIEE_04510CGSHIEE_04515CGSHIEE_04740CGSHIEE_04745
HINF281310 NTHI1768NTHI1764NTHI1763NTHI1702NTHI1701
HHAL349124 HHAL_2082HHAL_2080HHAL_2079HHAL_1804HHAL_1803
HCHE349521 HCH_06125HCH_06127HCH_06128HCH_02436HCH_02437
HAUR316274 HAUR_2962HAUR_2688HAUR_2990HAUR_0222HAUR_1693
HARS204773 HEAR0200HEAR0198HEAR0197HEAR1223HEAR1224
HACI382638 HAC_0018HAC_0016HAC_0015HAC_0014HAC_0013
GVIO251221 GLR1717GLL2795GLL2556GLR2758GLL2612
GURA351605 GURA_1731GURA_1734GURA_3288GURA_3280
GTHE420246 GTNG_2138GTNG_2137GTNG_2136GTNG_2134GTNG_2133
GSUL243231 GSU_2383GSU_2381GSU_2380GSU_2375GSU_2371
GOXY290633 GOX2286GOX2288GOX1201GOX1202
GMET269799 GMET_2497GMET_2494GMET_2482GMET_2477
GKAU235909 GK2204GK2203GK2202GK2200GK2199
GBET391165 GBCGDNIH1_0824GBCGDNIH1_0820GBCGDNIH1_0819GBCGDNIH1_2015GBCGDNIH1_2014
FTUL458234 FTA_2080FTA_2078FTA_2071FTA_0107FTA_0106
FTUL418136 FTW_2025FTW_2023FTW_2017FTW_0012FTW_0013
FTUL401614 FTN_1778FTN_1776FTN_1770FTN_1739FTN_1740
FTUL393115 FTF1802CFTF1795CFTF1773CFTF1772C
FTUL393011 FTH_1883FTH_1881FTH_1875FTH_0093FTH_0092
FTUL351581 FTL_1966FTL_1958FTL_0099FTL_0098
FSP1855 FRANEAN1_1928FRANEAN1_1931FRANEAN1_1932FRANEAN1_1933
FSP106370 FRANCCI3_3020FRANCCI3_3017FRANCCI3_3016FRANCCI3_3015
FRANT TRPETRPCTRPBTRPA
FPHI484022 FPHI_0839FPHI_0837FPHI_0834FPHI_0868FPHI_0866
FALN326424 FRAAL4972FRAAL4969FRAAL4968FRAAL4682
ESP42895 ENT638_2204ENT638_2205ENT638_2206ENT638_2207ENT638_2208
ELIT314225 ELI_06485ELI_06515ELI_07590ELI_07595
EFER585054 EFER_1692EFER_1693EFER_1694EFER_1695EFER_1696
ECOO157 TRPE_1TRPDTRPCTRPBTRPA
ECOL83334 ECS1836ECS1835ECS1834ECS1833ECS1832
ECOL585397 ECED1_1471ECED1_1470ECED1_1469ECED1_1468ECED1_1467
ECOL585057 ECIAI39_1601ECIAI39_1600ECIAI39_1599ECIAI39_1598ECIAI39_1597
ECOL585056 ECUMN_1563ECUMN_1562ECUMN_1561ECUMN_1560ECUMN_1559
ECOL585055 EC55989_1422EC55989_1421EC55989_1420EC55989_1419EC55989_1418
ECOL585035 ECS88_1399ECS88_1398ECS88_1397ECS88_1396ECS88_1395
ECOL585034 ECIAI1_1284ECIAI1_1283ECIAI1_1282ECIAI1_1281ECIAI1_1280
ECOL481805 ECOLC_2363ECOLC_2364ECOLC_2365ECOLC_2366ECOLC_2367
ECOL469008 ECBD_2358ECBD_2359ECBD_2360ECBD_2361ECBD_2362
ECOL439855 ECSMS35_1868ECSMS35_1869ECSMS35_1870ECSMS35_1871ECSMS35_1872
ECOL413997 ECB_01238ECB_01237ECB_01236ECB_01235ECB_01234
ECOL409438 ECSE_1313ECSE_1312ECSE_1311ECSE_1310ECSE_1309
ECOL405955 APECO1_425APECO1_424APECO1_423APECO1_422APECO1_421
ECOL364106 UTI89_C1533UTI89_C1532UTI89_C1531UTI89_C1530UTI89_C1529
ECOL362663 ECP_1312ECP_1311ECP_1310ECP_1309ECP_1308
ECOL331111 ECE24377A_1463ECE24377A_1462ECE24377A_1461ECE24377A_1460ECE24377A_1459
ECOL316407 ECK1258:JW1256:B1264ECK1257:JW1255:B1263ECK1256:JW1254:B1262ECK1255:JW1253:B1261ECK1254:JW1252:B1260
ECOL199310 C1730C1729C1726C1725
ECAR218491 ECA2296ECA2298ECA2299ECA2300ECA2301
DSP255470 CBDBA1441CBDBA1445CBDBA1450CBDBA1451
DSP216389 DEHABAV1_1271DEHABAV1_1274DEHABAV1_1277DEHABAV1_1278
DSHI398580 DSHI_1796DSHI_1799DSHI_1800DSHI_1031DSHI_0952
DRED349161 DRED_0248DRED_0250DRED_0251DRED_0253DRED_0254
DRAD243230 DR_1791DR_1767DR_0941DR_0942
DPSY177439 DP1619DP1621DP1622DP2949DP1630
DOLE96561 DOLE_1569DOLE_1567DOLE_1566DOLE_1564DOLE_1563
DHAF138119 DSY3202DSY3199DSY3200DSY3201
DETH243164 DET_1481DET_1484DET_1487DET_1488
DDES207559 DDE_3484DDE_3482DDE_3479DDE_3478
DARO159087 DARO_3481DARO_3476DARO_3475DARO_0870DARO_0871
CVIO243365 CV_2179CV_2173CV_2712CV_2762CV_2761
CVES412965 COSY_0734COSY_0117COSY_0756COSY_0933COSY_0927
CSP78 CAUL_2771CAUL_2777CAUL_2778CAUL_4976CAUL_4977
CSP501479 CSE45_1775CSE45_1863CSE45_1865CSE45_1299CSE45_2186
CSAL290398 CSAL_2323CSAL_2320CSAL_2319CSAL_1261CSAL_1262
CRUT413404 RMAG_0809RMAG_0112RMAG_0832RMAG_1031RMAG_1025
CPSY167879 CPS_3522CPS_3524CPS_3525CPS_3526CPS_3527
CPHY357809 CPHY_3848CPHY_3846CPHY_3845CPHY_3843CPHY_3842
CKLU431943 CKL_1274CKL_1276CKL_1277CKL_1279CKL_1280
CJAP155077 CJA_2663CJA_2661CJA_2660CJA_1751CJA_1752
CHYD246194 CHY_1587CHY_1585CHY_1584CHY_1582CHY_1581
CGLU196627 CG3359CG3361CG3362CG3363CG3364
CEFF196164 CE2868CE2870CE2871CE2872CE2873
CDIP257309 DIP2352DIP2354DIP2355DIP2360DIP2361
CDES477974 DAUD_1191DAUD_1189DAUD_1188DAUD_1186DAUD_1185
CBLO291272 BPEN_438BPEN_440BPEN_441BPEN_442BPEN_443
CBLO203907 BFL426BFL428BFL429BFL430BFL431
CBEI290402 CBEI_1749CBEI_1751CBEI_1754CBEI_1755
CAULO CC1895CC1898CC1899CC3544CC3543
CACE272562 CAC3163CAC3161CAC3160CAC3158CAC3157
BVIE269482 BCEP1808_0511BCEP1808_0509BCEP1808_0508BCEP1808_4462BCEP1808_4464
BTHU412694 BALH_1095BALH_1097BALH_1100BALH_1101
BTHU281309 BT9727_0064BT9727_1138BT9727_1141BT9727_1142
BTHA271848 BTH_I2909BTH_I2911BTH_I2912BTH_II0679BTH_II0681
BSUI470137 BSUIS_A1188BSUIS_A1189BSUIS_A1950BSUIS_A1948
BSUI204722 BR_1140BR_1141BR_2110BR_2108
BSP376 BRADO4109BRADO4110BRADO0091BRADO0090
BSP36773 BCEP18194_A3621BCEP18194_A3619BCEP18194_A3618BCEP18194_B2125BCEP18194_B2123
BSP107806 BUPT01BU280BU279BU278BU277
BPUM315750 BPUM_1999BPUM_1998BPUM_1997BPUM_1995BPUM_1994
BPSE320373 BURPS668_3556BURPS668_3558BURPS668_3559BURPS668_A2445BURPS668_A2443
BPSE320372 BURPS1710B_A3858BURPS1710B_A3860BURPS1710B_A3861BURPS1710B_B0909BURPS1710B_B0907
BPSE272560 BPSL3050BPSL3052BPSL3053BPSS1699BPSS1697
BPET94624 BPET0320BPET0318BPET0317BPET1738
BPER257313 BP3264BP3262BP3261BP3590
BPAR257311 BPP4156BPP4158BPP4159BPP3322
BOVI236 GBOORF1141GBOORF1142GBOORF2103GBOORF2101
BMEL359391 BAB1_1163BAB1_1164BAB1_2112BAB1_2110
BMEL224914 BMEI0844BMEI0843BMEI2018BMEI2019
BMAL320389 BMA10247_A1910BMA10247_A1912BMA10247_A1913BMA10247_A0529BMA10247_A0531
BMAL320388 BMASAVP1_0644BMASAVP1_0646BMASAVP1_0647BMASAVP1_1649BMASAVP1_1651
BMAL243160 BMA_A0533BMA_A0531BMA_A0530BMA_A1721BMA_A1719
BJAP224911 BLR4809BLR4810BLR0745BLR0746
BHAL272558 BH1659BH1661BH1663BH1664
BCLA66692 ABC1895ABC1896ABC1897ABC1899ABC1900
BCER572264 BCA_1277BCA_1279BCA_1282BCA_1283
BCER405917 BCE_1356BCE_1358BCE_1361BCE_1362
BCER288681 BCE33L0064BCE33L1132BCE33L1135BCE33L1136
BCER226900 BC_1232BC_1234BC_1235BC_1237BC_1238
BCEN331272 BCEN2424_0534BCEN2424_0532BCEN2424_0531BCEN2424_3958BCEN2424_3960
BCEN331271 BCEN_2571BCEN_2573BCEN_2574BCEN_4409BCEN_4407
BCAN483179 BCAN_A1159BCAN_A1160BCAN_A2154BCAN_A2152
BBRO257310 BB4626BB4628BB4629BB3773
BAPH198804 BUSG269BUSG268BUSG267BUSG266
BANT592021 BAA_1324BAA_1326BAA_1327BAA_1329BAA_1330
BANT568206 BAMEG_3342BAMEG_3340BAMEG_3339BAMEG_3337BAMEG_3336
BANT261594 GBAA1248GBAA1250GBAA1251GBAA1253GBAA1254
BANT260799 BAS0068BAS1158BAS1159BAS1161BAS1162
BAMY326423 RBAM_020840RBAM_020820RBAM_020800RBAM_020790
BAMB398577 BAMMC406_0463BAMMC406_0461BAMMC406_0460BAMMC406_3853BAMMC406_3855
BAMB339670 BAMB_0439BAMB_0437BAMB_0436BAMB_3348BAMB_3350
BABO262698 BRUAB1_1146BRUAB1_1147BRUAB1_2085BRUAB1_2083
AVAR240292 AVA_4721AVA_4408AVA_1926AVA_1911AVA_2082
ASP76114 EBA4177EBA4200EBA4201EBA4775EBA4776
ASP62977 ACIAD0297ACIAD2462ACIAD2463ACIAD0636ACIAD0642
ASP62928 AZO3325AZO3323AZO3322AZO1047AZO1048
ASP232721 AJS_0366AJS_0369AJS_0370AJS_3239AJS_3240
ASAL382245 ASA_1407ASA_1405ASA_1404ASA_1403ASA_1402
APLE434271 APJL_1183APJL_1185APJL_0870APJL_0496APJL_0497
APLE416269 APL_1163APL_1165APL_0859APL_0469APL_0470
ANAE240017 ANA_0527ANA_0525ANA_0524ANA_0524ANA_0523
AMET293826 AMET_1077AMET_1079AMET_1080AMET_1082AMET_1083
AMAR329726 AM1_5143AM1_2932AM1_4360AM1_4805AM1_1347
AHYD196024 AHA_2923AHA_2925AHA_2926AHA_2927AHA_2928
AFER243159 AFE_3088AFE_3090AFE_3091AFE_1026AFE_1027
AEHR187272 MLG_2250MLG_2248MLG_2247MLG_1236MLG_1237
ADEH290397 ADEH_4052ADEH_4054ADEH_4055ADEH_4057ADEH_4058
ACRY349163 ACRY_1234ACRY_1233ACRY_1232ACRY_1328ACRY_1329
ACAU438753 AZC_2208AZC_2206AZC_2205AZC_1018AZC_1020
ABOR393595 ABO_2027ABO_2025ABO_2024ABO_1461ABO_1460
ABAU360910 BAV3235BAV3153BAV3152BAV1102BAV1103
ABAC204669 ACID345_4120ACID345_3885ACID345_1156ACID345_1158ACID345_1160
AAVE397945 AAVE_0442AAVE_0585AAVE_0586AAVE_1215AAVE_1214
AAEO224324 AQ_582AQ_196AQ_1787AQ_706AQ_1548


Organism features enriched in list (features available for 330 out of the 355 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00206384092
Endospores:No 7.167e-2462211
GC_Content_Range4:0-40 1.355e-2166213
GC_Content_Range4:40-60 1.961e-7156224
GC_Content_Range4:60-100 1.781e-7108145
GC_Content_Range7:0-30 9.359e-12547
GC_Content_Range7:30-40 6.484e-1061166
GC_Content_Range7:50-60 4.787e-1291107
GC_Content_Range7:60-70 6.344e-8102134
Genome_Size_Range5:0-2 3.555e-2237155
Genome_Size_Range5:4-6 8.174e-17149184
Genome_Size_Range5:6-10 0.00019163847
Genome_Size_Range9:0-1 0.0000346527
Genome_Size_Range9:1-2 1.898e-1632128
Genome_Size_Range9:2-3 0.006552657120
Genome_Size_Range9:4-5 9.123e-67396
Genome_Size_Range9:5-6 9.872e-117688
Genome_Size_Range9:6-8 0.00015543238
Gram_Stain:Gram_Neg 1.295e-16237333
Gram_Stain:Gram_Pos 2.985e-1347150
Habitat:Aquatic 0.00067066591
Habitat:Host-associated 2.773e-1081206
Habitat:Multiple 0.0002875119178
Motility:No 1.147e-1052151
Motility:Yes 5.590e-9185267
Optimal_temp.:- 2.952e-6172257
Optimal_temp.:25-30 0.00001601919
Optimal_temp.:30-37 0.0000621218
Optimal_temp.:37 1.280e-736106
Oxygen_Req:Anaerobic 3.592e-735102
Pathogenic_in:Human 3.326e-792213
Pathogenic_in:No 0.0000957149226
Salinity:Non-halophilic 0.003032948106
Shape:Coccus 0.00004353082
Shape:Irregular_coccus 0.0042957417
Shape:Rod 5.402e-9230347
Shape:Sphere 0.0002283319
Shape:Spiral 0.0001895934
Temp._range:Hyperthermophilic 0.0019509623
Temp._range:Psychrophilic 0.005685599



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 157
Effective number of orgs (counting one per cluster within 468 clusters): 113

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 71
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MSYN262723 ncbi Mycoplasma synoviae 530
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R11
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CDIF272563 ncbi Clostridium difficile 6300
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BQUI283165 ncbi Bartonella quintana Toulouse0
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1


Names of the homologs of the genes in the group in each of these orgs
  EG11028   EG11027   EG11026   EG11025   EG11024   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TLET416591
TDEN243275
TACI273075
STOK273063 ST1229
SSUI391296
SSUI391295
SSOL273057 SSO0893
SSAP342451 SSP1379
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAUR93062 SACOL1406
SAUR93061 SAOUHSC_01369
SAUR426430 NWMN_1282
SAUR418127 SAHV_1358
SAUR367830 SAUSA300_1265
SAUR359787 SAURJH1_1460
SAUR359786 SAURJH9_1431
SAUR282459 SAS1310
SAUR282458 SAR1383
SAUR273036 SAB1225
SAUR196620 MW1257
SAUR158879 SA1202
SAUR158878 SAV1370
SAGA211110
SAGA208435
SAGA205921
SACI330779 SACI_1425
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PRUM264731
PPEN278197
PISL384616 PISL_1915
PINT246198
PHOR70601
PGIN242619
PAST100379
PARS340102 PARS_1419
PAER178306 PAE2461
OTSU357244
NSEN222891
MSYN262723
MSED399549 MSED_1687
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436
LJOH257314
LINT363253 LI0410
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LACI272621
KRAD266940 KRAD_2965
IHOS453591
HWAL362976 HQ1157A
HSP64091
HSOM205914
HSAL478009 OE1471F
HDUC233412
HBUT415426
FNUC190304 FN0317
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DNOD246195 DNO_0585
CTRA471473
CTRA471472
CTET212717
CSUL444179
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103 CPF_1272
CPER195102
CNOV386415 NT01CX_1342
CMUR243161
CMAQ397948
CKOR374847
CDIF272563
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CABO218497
BTUR314724
BTRI382640
BQUI283165
BHER314723
BHEN283166
BGAR290434
BCIC186490
BCER315749 BCER98_0064
BBUR224326
BBAC360095
BBAC264462
BAPH372461
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557 APE2551
AORE350688
AMAR234826
ALAI441768 ACL_0777


Organism features enriched in list (features available for 147 out of the 157 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00113823592
Arrangment:Clusters 8.960e-61317
Disease:Botulism 0.000968055
Disease:None 0.0006230558
Disease:Pharyngitis 0.003799868
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0001083911
Disease:Wide_range_of_infections 1.963e-71111
Disease:bronchitis_and_pneumonitis 0.003799868
Disease:endocarditis 0.003919344
Endospores:No 3.346e-983211
GC_Content_Range4:0-40 1.750e-26108213
GC_Content_Range4:40-60 0.000018936224
GC_Content_Range4:60-100 1.656e-173145
GC_Content_Range7:0-30 5.924e-173847
GC_Content_Range7:30-40 4.594e-970166
GC_Content_Range7:50-60 2.599e-78107
GC_Content_Range7:60-70 4.657e-172134
Genome_Size_Range5:0-2 5.341e-2690155
Genome_Size_Range5:4-6 2.851e-197184
Genome_Size_Range9:0-1 4.462e-102227
Genome_Size_Range9:1-2 4.202e-1568128
Genome_Size_Range9:3-4 0.00599591177
Genome_Size_Range9:4-5 9.969e-7796
Gram_Stain:Gram_Neg 4.274e-856333
Gram_Stain:Gram_Pos 8.731e-658150
Habitat:Aquatic 3.641e-6791
Habitat:Host-associated 6.285e-1490206
Habitat:Multiple 0.000026026178
Habitat:Terrestrial 0.0055922231
Motility:No 0.000267754151
Motility:Yes 2.052e-839267
Optimal_temp.:- 0.000734649257
Optimal_temp.:30-37 0.00092301118
Optimal_temp.:37 2.765e-646106
Oxygen_Req:Aerobic 0.000194730185
Pathogenic_in:Human 6.174e-983213
Pathogenic_in:No 2.084e-634226
Pathogenic_in:Swine 0.000968055
Salinity:Non-halophilic 0.004350937106
Shape:Coccus 9.886e-84182
Shape:Rod 2.708e-664347
Shape:Sphere 8.132e-71519
Temp._range:Hyperthermophilic 0.00314931223



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 9
Effective number of orgs (counting one per cluster within 468 clusters): 6

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MLAB410358 ncbi Methanocorpusculum labreanum Z 0.00105003635
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 2661 0.00117163715
HACI382638 ncbi Helicobacter acinonychis Sheeba 0.00562505075
HPYL357544 ncbi Helicobacter pylori HPAG1 0.00644925215
HPY ncbi Helicobacter pylori 26695 0.00644925215
HPYL85963 ncbi Helicobacter pylori J99 0.00676595265
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00764795395
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 0.00823485475
PMAR167555 ncbi Prochlorococcus marinus NATL1A 0.00846395505


Names of the homologs of the genes in the group in each of these orgs
  EG11028   EG11027   EG11026   EG11025   EG11024   
MLAB410358 MLAB_1399MLAB_1397MLAB_1396MLAB_1394MLAB_1393
MJAN243232 MJ_1075MJ_0234MJ_0918MJ_1037MJ_1038
HACI382638 HAC_0018HAC_0016HAC_0015HAC_0014HAC_0013
HPYL357544 HPAG1_1230HPAG1_1232HPAG1_1233HPAG1_1234HPAG1_1235
HPY HP1282HP1281HP1279HP1278HP1277
HPYL85963 JHP1203JHP1201JHP1200JHP1199JHP1198
PMAR59920 PMN2A_1149PMN2A_0258PMN2A_0863PMN2A_1531PMN2A_0008
PMAR167539 PRO_1732PRO_0744PRO_1371PRO_0188PRO_0574
PMAR167555 NATL1_20231NATL1_09271NATL1_17161NATL1_02381NATL1_06271


Organism features enriched in list (features available for 9 out of the 9 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Gastric_inflammation_and_peptic_ulcer_disease 0.000212222
GC_Content_Range4:0-40 0.00168908213
GC_Content_Range7:30-40 0.00024938166
Genome_Size_Range5:0-2 5.574e-69155
Genome_Size_Range9:1-2 9.460e-79128
Habitat:Aquatic 0.0055658591
Shape:Oval 0.002046125
Shape:Spiral 0.0009392434



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462260.5692
PWY-5918 (heme biosynthesis I)2722400.5557
PWY-5340 (sulfate activation for sulfonation)3853020.5513
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652900.5398
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4583340.5365
PWY-4041 (γ-glutamyl cycle)2792390.5217
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862430.5207
PROSYN-PWY (proline biosynthesis I)4753380.5129
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392710.5066
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112550.5044
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951830.5026
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482750.5008
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002470.4935
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4223110.4892
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982990.4874
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892390.4832
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181950.4811
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491480.4795
PWY-5913 (TCA cycle variation IV)3012450.4767
PWY-5938 ((R)-acetoin biosynthesis I)3762860.4755
TRPSYN-PWY (tryptophan biosynthesis)5253520.4705
TYRFUMCAT-PWY (tyrosine degradation I)1841710.4701
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832880.4647
PWY-6389 ((S)-acetoin biosynthesis)3682800.4636
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251960.4575
VALSYN-PWY (valine biosynthesis)5153460.4500
PWY-1269 (CMP-KDO biosynthesis I)3252540.4466
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2492080.4376
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2492080.4376
PWY-5386 (methylglyoxal degradation I)3052400.4294
HISTSYN-PWY (histidine biosynthesis)4993370.4276
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5053390.4240
HOMOSER-THRESYN-PWY (threonine biosynthesis from homoserine)5233460.4238
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2552090.4200
SER-GLYSYN-PWY (superpathway of serine and glycine biosynthesis I)5043380.4190
PWY-3781 (aerobic respiration -- electron donor II)4052920.4162
ARO-PWY (chorismate biosynthesis I)5103400.4155
PWY-5028 (histidine degradation II)1301260.4143
PWY0-501 (lipoate biosynthesis and incorporation I)3852810.4111
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831620.4109
CYSTSYN-PWY (cysteine biosynthesis I)5043370.4108
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912290.4106
PWY-5188 (tetrapyrrole biosynthesis I)4393070.4040
PWY-5986 (ammonium transport)3612670.4025
SERSYN-PWY (serine biosynthesis)5193420.4022
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911660.4019
PANTO-PWY (pantothenate biosynthesis I)4723220.4013



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11027   EG11026   EG11025   EG11024   
EG110280.9999430.9999280.9997020.999632
EG110270.9999760.9996110.999611
EG110260.9996790.99963
EG110250.999996
EG11024



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PAIRWISE BLAST SCORES:

  EG11028   EG11027   EG11026   EG11025   EG11024   
EG110280.0f0----
EG11027-0.0f0---
EG11026--0.0f0--
EG11025---0.0f0-
EG11024----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis) (degree of match pw to cand: 0.238, degree of match cand to pw: 1.000, average score: 0.694)
  Genes in pathway or complex:
             0.7356 0.4141 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.3279 0.1341 EG10078 (aroF) AROF-MONOMER (AroF)
             0.9456 0.8881 EG10080 (aroH) AROH-MONOMER (AroH)
             0.6216 0.4234 EG10079 (aroG) AROG-MONOMER (AroG)
             0.8975 0.7811 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.8901 0.7508 EG10076 (aroD) AROD-MONOMER (AroD)
             0.7747 0.4753 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.5982 0.1710 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.5804 0.3139 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
             0.9479 0.8503 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.5440 0.1396 EG10075 (aroC) AROC-MONOMER (AroC)
   *in cand* 0.9998 0.9996 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
   *in cand* 0.9998 0.9996 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
   *in cand* 0.9998 0.9996 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
   *in cand* 0.9998 0.9996 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9996 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
             0.2325 0.0019 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.7092 0.3005 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.5311 0.1643 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.6434 0.4674 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.3058 0.1789 EG11040 (tyrB) TYRB-MONOMER (TyrB)
  All candidate genes found in this pathway

- TRYPSYN (tryptophan synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9996 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
   *in cand* 0.9998 0.9996 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
   *in cand* 0.9998 0.9996 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9996 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)

- ALL-CHORISMATE-PWY (superpathway of chorismate) (degree of match pw to cand: 0.088, degree of match cand to pw: 1.000, average score: 0.580)
  Genes in pathway or complex:
             0.7048 0.3843 EG10799 (purN) GART-MONOMER (phosphoribosylglycinamide formyltransferase 1)
             0.8641 0.8015 EG11375 (folE) GTP-CYCLOHYDRO-I-MONOMER (GTP cyclohydrolase I monomer)
             0.7911 0.6989 EG11138 (nudB) H2NEOPTERINP3PYROPHOSPHOHYDRO-MONOMER (dihydroneopterin triphosphate pyrophosphohydrolase)
             0.6146 0.0916 EG11673 (folB) H2NEOPTERINALDOL-MONOMER (FolB)
             0.4208 0.0838 EG11374 (folK) H2PTERIDINEPYROPHOSPHOKIN-MONOMER (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase)
             0.7213 0.5320 G6862 (folM) G6862-MONOMER (dihydromonapterin reductase / dihydrofolate reductase)
             0.6457 0.5409 EG10326 (folA) DIHYDROFOLATEREDUCT-MONOMER (dihydrofolate reductase)
             0.7692 0.4330 EG10327 (folC) FOLC-MONOMER (bifunctional folypolyglutamate synthetase / dihydrofolate synthetase)
             0.3734 0.0026 EG10328 (folD) FOLD-MONOMER (FolD)
             0.9983 0.9960 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
             0.9991 0.9981 EG10683 (pabB) PABASYN-COMPI-MONOMER (PabB)
             0.3135 0.1578 EG50011 (folP) H2PTEROATESYNTH-MONOMER (FolP)
             0.8055 0.6927 EG11493 (pabC) ADCLY-MONOMER (pabC)
             0.0421 0.0303 EG11369 (ubiC) CHORPYRLY-MONOMER (chorismate lyase)
             0.5707 0.3503 EG11370 (ubiA) 4OHBENZOATE-OCTAPRENYLTRANSFER-MONOMER (4-hydroxybenzoate octaprenyltransferase)
             0.6006 0.1480 EG11044 (ubiX) UBIX-MONOMER (3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG)
             0.1319 0.0784 EG11396 (ubiD) EG11396-MONOMER (3-octaprenyl-4-hydroxybenzoate carboxy-lyase monomer)
             0.3472 0.0006 EG11476 (ubiB) 2-OCTAPRENYLPHENOL-HYDROX-MONOMER (2-octaprenylphenol hydroxylase)
             0.5521 0.2066 EG11143 (ubiG) DHHB-METHYLTRANSFER-MONOMER (UbiG)
             0.4479 0.1011 EG11324 (ubiH) OCTAPRENYL-METHOXYPHENOL-OH-MONOMER (2-octaprenyl-6-methoxyphenol hydroxylase)
             0.9670 0.9486 G6365 (ubiF) OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase)
             0.3058 0.1789 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.6434 0.4674 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.5311 0.1643 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.7092 0.3005 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.2325 0.0019 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9998 0.9996 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
   *in cand* 0.9998 0.9996 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9996 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
   *in cand* 0.9998 0.9996 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
   *in cand* 0.9998 0.9996 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
             0.5440 0.1396 EG10075 (aroC) AROC-MONOMER (AroC)
             0.9479 0.8503 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.5804 0.3139 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
             0.5982 0.1710 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.7747 0.4753 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.8901 0.7508 EG10076 (aroD) AROD-MONOMER (AroD)
             0.8975 0.7811 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.6216 0.4234 EG10079 (aroG) AROG-MONOMER (AroG)
             0.9456 0.8881 EG10080 (aroH) AROH-MONOMER (AroH)
             0.3279 0.1341 EG10078 (aroF) AROF-MONOMER (AroF)
             0.7356 0.4141 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.9979 0.9959 EG10261 (entC) ENTC-MONOMER (isochorismate synthase 1)
             0.6061 0.4046 EG10259 (entA) ENTA-MONOMER (EntA)
             0.5770 0.4834 EG10263 (entE) ENTE-MONOMER (EntE)
             0.4717 0.1507 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)
             0.5099 0.4406 EG10262 (entD) ENTD-MONOMER (phosphopantetheinyl transferase)
             0.5360 0.3834 EG10260 (entB) ENTB-MONOMER (EntB)
             0.6224 0.2643 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
             0.5897 0.4324 EG11368 (menB) NAPHTHOATE-SYN-MONOMER (MenB)
             0.4745 0.3008 EG12438 (menH) EG12438-MONOMER ((1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase)
             0.3312 0.1257 EG10579 (menD) MEND-MONOMER (MenD)
             0.9986 0.9973 EG12362 (menF) MENF-MONOMER (MenF)
             0.3160 0.2186 EG11532 (menC) O-SUCCINYLBENZOATE-COA-SYN-MONOMER (o-succinylbenzoate synthase)
             0.5470 0.4287 EG12437 (menE) O-SUCCINYLBENZOATE-COA-LIG-MONOMER (MenE)
             0.1885 0.0494 EG11880 (menA) DMK-MONOMER (1,4-dihydroxy-2-naphthoate octaprenyltransferase)
             0.6272 0.1756 EG11473 (ubiE) 2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase)
  All candidate genes found in this pathway
   This pathway has holes

- ANTHRANSYN-CPLX (anthranilate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9996 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9996 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
   *in cand* 0.9998 0.9996 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
   *in cand* 0.9998 0.9996 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)

- TRPSYN-PWY (tryptophan biosynthesis) (degree of match pw to cand: 1.000, degree of match cand to pw: 1.000, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9996 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
   *in cand* 0.9998 0.9996 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
   *in cand* 0.9998 0.9996 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
   *in cand* 0.9998 0.9996 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
   *in cand* 0.9998 0.9996 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
  All candidate genes found in this pathway



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11024 EG11025 EG11026 EG11027 EG11028 (centered at EG11026)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11028   EG11027   EG11026   EG11025   EG11024   
390/623362/623409/623403/623419/623
AAEO224324:0:Tyes27901122356953
AAUR290340:2:Tyes0--4-
AAVE397945:0:Tyes0140141757756
ABAC204669:0:Tyes29882746024
ABAU360910:0:Tyes21412057205601
ABOR393595:0:Tyes57557357210
ABUT367737:0:Tyes--1500-
ACAU438753:0:Tyes12041202120102
ACEL351607:0:Tyes0--34
ACRY349163:8:Tyes2109899
ADEH290397:0:Tyes02356
AEHR187272:0:Tyes10071005100401
AFER243159:0:Tyes20372039204001
AFUL224325:0:Tyes---10
AHYD196024:0:Tyes02345
ALAI441768:0:Tyes---0-
AMAR329726:9:Tyes37661571299034320
AMET293826:0:Tyes02356
ANAE240017:0:Tyes42110
APER272557:0:Tyes-0---
APLE416269:0:Tyes69269438901
APLE434271:0:Tno67567735801
ASAL382245:5:Tyes53210
ASP1667:3:Tyes0--45
ASP232721:2:Tyes03427832784
ASP62928:0:Tyes23122310230901
ASP62977:0:Tyes020222023309314
ASP76114:2:Tyes01415350351
AVAR240292:3:Tyes28162500150174
BABO262698:1:Tno-01920918
BAMB339670:2:Tno---02
BAMB339670:3:Tno310--
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BAMB398577:3:Tno310--
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BANT261594:2:Tno02356
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BAPH198804:0:Tyes-3210
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BCEN331271:1:Tno---20
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BCEN331272:2:Tyes---02
BCEN331272:3:Tyes310--
BCER226900:1:Tyes02356
BCER288681:0:Tno01139-11421143
BCER315749:1:Tyes0----
BCER405917:1:Tyes02-56
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BCLA66692:0:Tyes01245
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BFRA295405:0:Tno--0-2
BHAL272558:0:Tyes0-245
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BMAL320388:0:Tno023981983
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BMEL224914:1:Tno-1011941195
BMEL359391:1:Tno-01883881
BOVI236:1:Tyes-01819817
BPAR257311:0:Tno816818819-0
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BPET94624:0:Tyes310-1436
BPSE272560:0:Tyes---20
BPSE272560:1:Tyes023--
BPSE320372:0:Tno---20
BPSE320372:1:Tno023--
BPSE320373:0:Tno---20
BPSE320373:1:Tno023--
BPUM315750:0:Tyes54310
BSP107806:0:Tyes0----
BSP107806:2:Tyes-3210
BSP36773:1:Tyes---20
BSP36773:2:Tyes310--
BSP376:0:Tyes-3808380910
BSUB:0:Tyes5--10
BSUI204722:1:Tyes-01935933
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BTHA271848:0:Tno---02
BTHA271848:1:Tno023--
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BTHU412694:1:Tno02-56
BVIE269482:6:Tyes---02
BVIE269482:7:Tyes310--
BWEI315730:4:Tyes02--6
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CACE272562:1:Tyes64310
CAULO:0:Tyes03416781677
CBEI290402:0:Tyes02-56
CBLO203907:0:Tyes02345
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CCHL340177:0:Tyes326-0--
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CCUR360105:0:Tyes-5360-533
CDES477974:0:Tyes64310
CDIP257309:0:Tyes02378
CEFF196164:0:Fyes02345
CFEL264202:1:Tyes---10
CFET360106:0:Tyes-0271-3
CGLU196627:0:Tyes02345
CHOM360107:1:Tyes--48-0
CHUT269798:0:Tyes--0-4
CHYD246194:0:Tyes64310
CJAP155077:0:Tyes89789589401
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CJEJ354242:2:Tyes-0136-3
CJEJ360109:0:Tyes-1560-153
CJEJ407148:0:Tno-0148-3
CKLU431943:1:Tyes02356
CMET456442:0:Tyes64--0
CMIC31964:2:Tyes5--10
CMIC443906:2:Tyes5--10
CNOV386415:0:Tyes---0-
CPEL335992:0:Tyes3-0--
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CPHY357809:0:Tyes64310
CPSY167879:0:Tyes02345
CRUT413404:0:Tyes6430666862856
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CSP501479:8:Fyes4675535550872
CSP78:2:Tyes06722342235
CTEP194439:0:Tyes913-11340-
CVES412965:0:Tyes5950613781775
CVIO243365:0:Tyes60543593592
DARO159087:0:Tyes26222617261601
DDES207559:0:Tyes64-10
DETH243164:0:Tyes0-367
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DNOD246195:0:Tyes--0--
DOLE96561:0:Tyes64310
DPSY177439:2:Tyes023135711
DRAD243230:3:Tyes830806-01
DRED349161:0:Tyes02356
DSHI398580:5:Tyes853856857790
DSP216389:0:Tyes0-367
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DVUL882:1:Tyes-0-34
ECAR218491:0:Tyes02345
ECOL199310:0:Tno32-10
ECOL316407:0:Tno43210
ECOL331111:6:Tno53210
ECOL362663:0:Tno43210
ECOL364106:1:Tno43210
ECOL405955:2:Tyes43210
ECOL409438:6:Tyes43210
ECOL413997:0:Tno43210
ECOL439855:4:Tno01234
ECOL469008:0:Tno01234
ECOL481805:0:Tno01234
ECOL585034:0:Tno43210
ECOL585035:0:Tno43210
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ECOL585056:2:Tno43210
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ECOLI:0:Tno43210
ECOO157:0:Tno02345
EFER585054:1:Tyes01234
ELIT314225:0:Tyes0-6222223
ESP42895:1:Tyes01234
FALN326424:0:Tyes288-2852840
FJOH376686:0:Tyes--025
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FPHI484022:1:Tyes5303635
FRANT:0:Tno22-1710
FSP106370:0:Tyes5-210
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FTUL351581:0:Tno1651-164510
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FTUL393115:0:Tyes22-1710
FTUL401614:0:Tyes37352901
FTUL418136:0:Tno16721670166401
FTUL458234:0:Tno15461544153810
GBET391165:0:Tyes51011961195
GFOR411154:0:Tyes--0-3
GKAU235909:1:Tyes54310
GMET269799:1:Tyes18-1550
GOXY290633:5:Tyes1079-108101
GSUL243231:0:Tyes1210940
GTHE420246:1:Tyes54310
GURA351605:0:Tyes0-315491541
GVIO251221:0:Tyes010908481053904
HACI382638:1:Tyes53210
HARS204773:0:Tyes310960961
HAUR316274:2:Tyes27602485278801486
HCHE349521:0:Tyes35653567356801
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HHEP235279:0:Tyes10--1130
HINF281310:0:Tyes59565510
HINF374930:0:Tyes0234546
HINF71421:0:Tno0344445
HMAR272569:8:Tyes-0--327
HMOD498761:0:Tyes02-56
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HPY:0:Tno43210
HPYL357544:1:Tyes02345
HPYL85963:0:Tno53210
HSAL478009:4:Tyes----0
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HWAL362976:1:Tyes----0
ILOI283942:0:Tyes02345
JSP290400:1:Tyes52017361731
JSP375286:0:Tyes31019691968
KPNE272620:2:Tyes43210
KRAD266940:2:Fyes---0-
LBIF355278:2:Tyes--0-1354
LBIF456481:2:Tno--0-1396
LBOR355276:1:Tyes0-1887-659
LBOR355277:1:Tno1835-0-103
LCAS321967:1:Tyes-4310
LCHO395495:0:Tyes22382218221701
LINN272626:1:Tno5320-
LINT189518:1:Tyes2810-0-2466
LINT267671:1:Tno0-2161-275
LINT363253:3:Tyes----0
LLAC272622:5:Tyes1210-10
LLAC272623:0:Tyes86-10
LMES203120:1:Tyes043-1
LMON169963:0:Tno53-0-
LMON265669:0:Tyes53-0-
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LPNE272624:0:Tno-10470471
LPNE297245:1:Fno-10398399
LPNE297246:1:Fyes-10373374
LPNE400673:0:Tno-1698169901
LSPH444177:1:Tyes0-277-274
LWEL386043:0:Tyes64310
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MABS561007:1:Tyes2-0--
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MAER449447:0:Tyes559-27500323
MAQU351348:2:Tyes19461948194910
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MFLA265072:0:Tyes77176776510
MGIL350054:3:Tyes2-0--
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MKAN190192:0:Tyes35-9963920
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MLEP272631:0:Tyes0-2--
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MMAG342108:0:Tyes01049105021972198
MMAR267377:0:Tyes---10
MMAR368407:0:Tyes02-56
MMAR394221:0:Tyes13091306130530
MMAR402880:1:Tyes---01
MMAR426368:0:Tyes---10
MMAR444158:0:Tyes---01
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MPET420662:1:Tyes13061304130310
MSED399549:0:Tyes0----
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MSP189918:2:Tyes2-0--
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MTHE187420:0:Tyes06-45
MTHE264732:0:Tyes64310
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MVAN350058:0:Tyes0-2--
MXAN246197:0:Tyes100-34
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NFAR247156:2:Tyes0-2--
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NHAM323097:2:Tyes-1610160910
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NMEN122587:0:Tyes3442711275220
NMEN272831:0:Tno6736200350328
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NPHA348780:2:Tyes90---0
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NSP35761:1:Tyes--10-
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OANT439375:5:Tyes-1274127302
OCAR504832:0:Tyes-1828182901
OIHE221109:0:Tyes64310
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PAER178306:0:Tyes-0---
PAER208963:0:Tyes411663263310
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PARC259536:0:Tyes-54154001
PARS340102:0:Tyes-0---
PATL342610:0:Tyes02345
PCAR338963:0:Tyes023-1519
PCRY335284:1:Tyes-97197201
PDIS435591:0:Tyes--2-0
PENT384676:0:Tyes37137537610
PFLU205922:0:Tyes5085-508001
PFLU216595:1:Tyes5323-532010
PFLU220664:0:Tyes5488-548010
PFUR186497:0:Tyes-5-10
PHAL326442:1:Tyes53210
PING357804:0:Tyes53210
PISL384616:0:Tyes-0---
PLUM243265:0:Fyes02345
PLUT319225:0:Tyes0-177--
PMAR146891:0:Tyes-72413110445
PMAR167539:0:Tyes157957412080401
PMAR167540:0:Tyes-80511570421
PMAR167542:0:Tyes-86613030460
PMAR167546:0:Tyes-72413000414
PMAR167555:0:Tyes181370114970402
PMAR59920:0:Tno116025386615480
PMAR74546:0:Tyes1536-12500417
PMAR74547:0:Tyes139732101721130
PMAR93060:0:Tyes-77113630484
PMEN399739:0:Tyes39733921392010
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PMUL272843:1:Tyes74310
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PSP296591:2:Tyes83482982801
PSP312153:0:Tyes310631632
PSP56811:2:Tyes-89589601
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PSYR205918:0:Tyes4594456571610
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PTHE370438:0:Tyes53210
RALB246199:0:Tyes43210
RCAS383372:0:Tyes2052029018050
RDEN375451:4:Tyes057660651
RETL347834:5:Tyes-2136213701
REUT264198:3:Tyes72873073120
REUT381666:2:Tyes69469669720
RFER338969:1:Tyes182018151814-0
RLEG216596:6:Tyes-2489249001
RMET266264:2:Tyes70871071120
RPAL258594:0:Tyes-2836283701
RPAL316055:0:Tyes-2116211501
RPAL316056:0:Tyes-2073207210
RPAL316057:0:Tyes-2656265701
RPAL316058:0:Tyes-2180218110
RPOM246200:1:Tyes13121316131707
RRUB269796:1:Tyes05615301531
RSAL288705:0:Tyes4-10-
RSOL267608:0:Tyes-10--
RSOL267608:1:Tyes914--20
RSP101510:3:Fyes4-2-0
RSP357808:0:Tyes196193012581675
RSPH272943:3:Tyes---0-
RSPH272943:4:Tyes410-1889
RSPH349101:1:Tno---0-
RSPH349101:2:Tno410-1793
RSPH349102:4:Tyes---0-
RSPH349102:5:Tyes273027272726-0
RXYL266117:0:Tyes266510
SACI330779:0:Tyes0----
SACI56780:0:Tyes64310
SALA317655:1:Tyes341-0231230
SARE391037:0:Tyes4-10-
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SAVE227882:1:Fyes0-467
SBAL399599:3:Tyes02345
SBAL402882:1:Tno02345
SBOY300268:1:Tyes01234
SCO:2:Fyes71190118910
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SDYS300267:1:Tyes43210
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SEPI176279:1:Tyes0-35-
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SFLE198214:0:Tyes43210
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SFUM335543:0:Tyes64-10
SGLO343509:3:Tyes53210
SGOR29390:0:Tyes02-5-
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SHAL458817:0:Tyes53210
SHIGELLA:0:Tno43210
SLAC55218:1:Fyes24632460245960
SLOI323850:0:Tyes02345
SMED366394:3:Tyes-0118071808
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SONE211586:1:Tyes02345
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SPRO399741:1:Tyes02345
SRUB309807:1:Tyes0-5-8
SSAP342451:2:Tyes0----
SSED425104:0:Tyes53210
SSOL273057:0:Tyes0----
SSON300269:1:Tyes01234
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SSP387093:0:Tyes0-12281861632
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SSP644076:5:Fyes620--
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STOK273063:0:Tyes0----
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SWOL335541:0:Tyes--0-3
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VPAR223926:1:Tyes02345
VVUL196600:2:Tyes53210
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YPES187410:5:Tno3-210
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YPES349746:2:Tno02395
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YPES377628:2:Tno53210
YPES386656:2:Tno02345
YPSE273123:2:Tno53210
YPSE349747:2:Tno02345
ZMOB264203:0:Tyes0-79120119



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