CANDIDATE ID: 190

CANDIDATE ID: 190

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9968870e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG12163 (rsmB) (b3289)
   Products of gene:
     - EG12163-MONOMER (16S rRNA m5C967 methyltransferase)
       Reactions:
        cytosine967 in 16S rRNA + S-adenosyl-L-methionine  ->  5-methylcytosine967 in 16S rRNA + S-adenosyl-L-homocysteine

- EG11604 (smf) (b3286 (obsolete))
   Products of gene:
     - EG11604-MONOMER (conserved protein)

- EG11440 (def) (b3287)
   Products of gene:
     - EG11440-MONOMER (peptide deformylase)
       Reactions:
        formyl-L-methionyl peptide + H2O  ->  methionyl peptide + formate + H+

- EG11268 (fmt) (b3288)
   Products of gene:
     - EG11268-MONOMER (10-formyltetrahydrofolate:L-methionyl-tRNAfMet N-formyltransferase)
       Reactions:
        L-methionyl-tRNAfmet + 10-formyl-tetrahydrofolate + H2O  ->  N-formyl-L-methionyl-tRNAfmet + tetrahydrofolate

- EG11019 (trkA) (b3290)
   Products of gene:
     - TRKA-MONOMER (NAD-binding component of TrK potassium transporter)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 329
Effective number of orgs (counting one per cluster within 468 clusters): 234

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP28240 Thermotoga sp.4
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TPET390874 ncbi Thermotoga petrophila RKU-14
TMAR243274 ncbi Thermotoga maritima MSB84
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE299768 ncbi Streptococcus thermophilus CNRZ10664
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
STHE264199 ncbi Streptococcus thermophilus LMG 183114
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B5
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP292414 ncbi Ruegeria sp. TM10405
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SRUB309807 ncbi Salinibacter ruber DSM 138554
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705854
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-64
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-144
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE170187 ncbi Streptococcus pneumoniae G544
SPNE1313 Streptococcus pneumoniae4
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMUT210007 ncbi Streptococcus mutans UA1594
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGOR29390 Streptococcus gordonii Challis4
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS105
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-004
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HNEP81032 Hyphomonas neptunium4
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DSP255470 ncbi Dehalococcoides sp. CBDB14
DSP216389 ncbi Dehalococcoides sp. BAV14
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DRED349161 ncbi Desulfotomaculum reducens MI-15
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DETH243164 ncbi Dehalococcoides ethenogenes 1954
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CTET212717 ncbi Clostridium tetani E885
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT4
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDIF272563 ncbi Clostridium difficile 6304
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054765
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54824
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-15
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5835
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  EG12163   EG11604   EG11440   EG11268   EG11019   
ZMOB264203 ZMO0017ZMO1194ZMO0813ZMO0811
YPSE349747 YPSIP31758_3884YPSIP31758_3881YPSIP31758_3882YPSIP31758_3883YPSIP31758_3885
YPSE273123 YPTB3667YPTB3664YPTB3665YPTB3666YPTB3668
YPES386656 YPDSF_0162YPDSF_0165YPDSF_0164YPDSF_0163YPDSF_0161
YPES377628 YPN_3829YPN_3826YPN_3827YPN_3828YPN_3830
YPES360102 YPA_3233YPA_3230YPA_3231YPA_3232YPA_3234
YPES349746 YPANGOLA_A0613YPANGOLA_A0616YPANGOLA_A0615YPANGOLA_A0614YPANGOLA_A0612
YPES214092 YPO0240YPO0243YPO0242YPO0241YPO0239
YPES187410 Y4021Y4024Y4023Y4022Y4020
YENT393305 YE3891YE3888YE3889YE3890YE3892
XORY360094 XOOORF_0698XOOORF_0694XOOORF_0696XOOORF_0697
XORY342109 XOO0548XOO0544XOO0546XOO0547
XORY291331 XOO0587XOO0583XOO0585XOO0586
XFAS405440 XFASM12_1927XFASM12_1931XFASM12_1929XFASM12_1928
XFAS183190 PD_1761PD_1765PD_1763PD_1762
XFAS160492 XF0928XF0924XF0926XF0927
XCAM487884 XCC-B100_3928XCC-B100_3932XCC-B100_3930XCC-B100_3929
XCAM316273 XCAORF_0559XCAORF_0554XCAORF_0556XCAORF_0558
XCAM314565 XC_3817XC_3821XC_3819XC_3818
XCAM190485 XCC3747XCC3751XCC3749XCC3748
XAXO190486 XAC3799XAC3803XAC3801XAC3800
XAUT78245 XAUT_0941XAUT_3916XAUT_3305XAUT_3304XAUT_4396
VVUL216895 VV1_1046VV1_1050VV1_1048VV1_1047VV1_1045
VVUL196600 VV3227VV3223VV3225VV3226VV3228
VPAR223926 VP3044VP3040VP3042VP3043VP3045
VFIS312309 VF2545VF2541VF2543VF2544VF2546
VEIS391735 VEIS_2266VEIS_4084VEIS_4082VEIS_4081
VCHO345073 VC0395_A2475VC0395_A2471VC0395_A2473VC0395_A2474VC0395_A2476
VCHO VC0044VC0048VC0046VC0045VC0043
TTUR377629 TERTU_0035TERTU_0039TERTU_0037TERTU_0036TERTU_0034
TTEN273068 TTE1503TTE1450TTE1507TTE1506
TSP28240 TRQ2_1406TRQ2_0698TRQ2_1168TRQ2_1728
TSP1755 TETH514_1752TETH514_1701TETH514_1757TETH514_1755
TPSE340099 TETH39_1316TETH39_1265TETH39_1320TETH39_1319
TPET390874 TPET_1280TPET_0674TPET_1130TPET_1655
TMAR243274 TM_1512TM_0250TM_1661TM_1087.1
TDEN292415 TBD_0016TBD_0012TBD_0014TBD_0015TBD_0020
TCRU317025 TCR_0191TCR_0194TCR_0193TCR_0192TCR_0187
SWOL335541 SWOL_1228SWOL_0839SWOL_1232SWOL_1231SWOL_0914
STYP99287 STM3408STM3405STM3406STM3407STM3409
STHE299768 STR1427STR0896STR1428STR0265
STHE292459 STH1349STH1480STH1343STH1344
STHE264199 STU1427STU0896STU1428STU0265
SSP94122 SHEWANA3_0033SHEWANA3_0037SHEWANA3_0035SHEWANA3_0034SHEWANA3_0032
SSP644076 SCH4B_3469SCH4B_2498SCH4B_2759SCH4B_2756SCH4B_2285
SSP321332 CYB_1963CYB_0678CYB_2769CYB_1993
SSP321327 CYA_1094CYA_2512CYA_0120CYA_1691
SSP292414 TM1040_0089TM1040_2338TM1040_2580TM1040_2577TM1040_1358
SSP1148 SLR0679SLR1197SLR0070SLR0773
SSON300269 SSO_3429SSO_3426SSO_3427SSO_3428SSO_3430
SSED425104 SSED_0033SSED_0037SSED_0035SSED_0034SSED_0032
SSAP342451 SSP1555SSP1519SSP1556SSP1703
SRUB309807 SRU_0884SRU_1187SRU_1291SRU_2270
SPRO399741 SPRO_4513SPRO_4510SPRO_4511SPRO_4512SPRO_4514
SPNE488221 SP70585_1774SP70585_1329SP70585_1775SP70585_0543
SPNE487214 SPH_1843SPH_1382SPH_1844SPH_0592
SPNE487213 SPT_1672SPT_0962SPT_1673SPT_0521
SPNE171101 SPR1579SPR1144SPR1580SPR0427
SPNE170187 SPN02037SPN10057SPN02038SPN03114
SPNE1313 SPJ_1630SPJ_1180SPJ_1631SPJ_0451
SPEA398579 SPEA_0029SPEA_0033SPEA_0031SPEA_0030SPEA_0028
SONE211586 SO_0030SO_0034SO_0032SO_0031SO_0029
SMUT210007 SMU_482SMU_1001SMU_481SMU_1708
SMEL266834 SMC04090SMC01363SMC01101SMC01100SMC01046
SMED366394 SMED_3191SMED_0933SMED_0054SMED_0055SMED_1093
SLOI323850 SHEW_3738SHEW_3734SHEW_3736SHEW_3737SHEW_3739
SLAC55218 SL1157_1320SL1157_0168SL1157_1868SL1157_1870SL1157_2688
SHIGELLA SUNSMFDEFFMTTRKA
SHAL458817 SHAL_0025SHAL_0029SHAL_0027SHAL_0026SHAL_0024
SGOR29390 SGO_0598SGO_1198SGO_0597SGO_1666
SGLO343509 SG2248SG2246SG2247SG2249
SFUM335543 SFUM_0150SFUM_0212SFUM_0147SFUM_0148
SFLE373384 SFV_3308SFV_3305SFV_3306SFV_3307SFV_3309
SFLE198214 AAN44783.1AAN44780.1AAN44781.1AAN44782.1AAN44784.1
SEPI176280 SE_0892SE_0925SE_0891SE_0786
SEPI176279 SERP0783SERP0815SERP0782SERP0674
SENT454169 SEHA_C3712SEHA_C3709SEHA_C3710SEHA_C3711SEHA_C3713
SENT321314 SCH_3344SCH_3341SCH_3342SCH_3343SCH_3345
SENT295319 SPA3275SPA3272SPA3273SPA3274SPA3276
SENT220341 STY4389STY4392STY4391STY4390STY4388
SENT209261 T4096T4099T4098T4097T4095
SELO269084 SYC0580_DSYC0827_CSYC0213_DSYC1982_DSYC0286_D
SDYS300267 SDY_3465SDY_3462SDY_3463SDY_3464SDY_3466
SDEN318161 SDEN_0022SDEN_0026SDEN_0024SDEN_0023SDEN_0021
SDEG203122 SDE_0019SDE_0023SDE_0021SDE_0020SDE_0018
SBOY300268 SBO_3282SBO_3279SBO_3280SBO_3281SBO_3283
SBAL402882 SHEW185_0025SHEW185_0029SHEW185_0027SHEW185_0026SHEW185_0024
SBAL399599 SBAL195_0029SBAL195_0033SBAL195_0031SBAL195_0030SBAL195_0028
SAUR93061 SAOUHSC_01184SAOUHSC_01221SAOUHSC_01183SAOUHSC_01034
SAUR273036 SAB1081SAB1111SAB1080SAB0954
SAUR196620 MW1100MW1132MW1099MW0970
SAUR158879 SA1060SA1092SA1059SA0939
SAUR158878 SAV1217SAV1249SAV1216SAV1088
SALA317655 SALA_1047SALA_1209SALA_0251SALA_0249
SAGA211110 GBS0305GBS1041GBS0304GBS1639
SAGA208435 SAG_0317SAG_1006SAG_0316SAG_1590
SAGA205921 SAK_0387SAK_1101SAK_0386SAK_1605
SACI56780 SYN_02708SYN_02797SYN_02707SYN_02618
RSPH349102 RSPH17025_2926RSPH17025_2317RSPH17025_0148RSPH17025_0151RSPH17025_1491
RSPH349101 RSPH17029_2765RSPH17029_0849RSPH17029_2532RSPH17029_2535RSPH17029_1453
RSPH272943 RSP_2177RSP_0872RSP_0875RSP_2841
RSOL267608 RSC0075RSC0068RSC0070RSC0072
RRUB269796 RRU_A3660RRU_A3194RRU_A3350RRU_A3351RRU_A1681
RPOM246200 SPO_3078SPO_3219SPO_3216SPO_2083
RPAL316058 RPB_0086RPB_2421RPB_0673RPB_0674
RPAL316057 RPD_0717RPD_3031RPD_0081RPD_0080
RPAL316056 RPC_0025RPC_2244RPC_0803RPC_0806
RPAL316055 RPE_0028RPE_3377RPE_0656RPE_0655
RPAL258594 RPA0030RPA3120RPA0621RPA0622
RMET266264 RMET_3562RMET_3567RMET_3565RMET_3564
RLEG216596 RL4724RL1736RL0430RL0433
RFER338969 RFER_3590RFER_3862RFER_3860RFER_3859
REUT381666 H16_A3697H16_A3702H16_A3700H16_A3699
REUT264198 REUT_A3405REUT_A3410REUT_A3408REUT_A3407
RETL347834 RHE_CH04109RHE_CH01639RHE_CH00412RHE_CH00414
RDEN375451 RD1_0653RD1_2132RD1_1337RD1_1339RD1_2757
PTHE370438 PTH_1788PTH_1245PTH_1791PTH_1790
PSYR223283 PSPTO_0179PSPTO_0175PSPTO_0177PSPTO_0178PSPTO_0180
PSYR205918 PSYR_0017PSYR_0021PSYR_0019PSYR_0018PSYR_0016
PSTU379731 PST_0019PST_0023PST_0021PST_0020PST_0018
PSP56811 PSYCPRWF_2382PSYCPRWF_2377PSYCPRWF_0042PSYCPRWF_2383
PSP312153 PNUC_2077PNUC_2080PNUC_2079PNUC_2078
PSP296591 BPRO_4436BPRO_4641BPRO_4639BPRO_4638
PPUT76869 PPUTGB1_0082PPUTGB1_0085PPUTGB1_0084PPUTGB1_0083PPUTGB1_0081
PPUT351746 PPUT_0082PPUT_0085PPUT_0084PPUT_0083PPUT_0081
PPUT160488 PP_0066PP_0069PP_0068PP_0067PP_0065
PPRO298386 PBPRA3581PBPRA3577PBPRA3579PBPRA3580PBPRA3582
PNAP365044 PNAP_3632PNAP_3881PNAP_3878PNAP_3877
PMUL272843 PM1561PM1599PM1559PM1560PM1563
PMEN399739 PMEN_0053PMEN_0057PMEN_0055PMEN_0054PMEN_0052
PLUM243265 PLU4697PLU4694PLU4695PLU4696PLU4698
PING357804 PING_0080PING_0076PING_0078PING_0079PING_0081
PHAL326442 PSHAA0021PSHAA0025PSHAA0023PSHAA0022PSHAA0020
PFLU220664 PFL_0020PFL_0024PFL_0022PFL_0021PFL_0019
PFLU216595 PFLU0016PFLU0020PFLU0018PFLU0017PFLU0015
PFLU205922 PFL_0015PFL_0019PFL_0017PFL_0016PFL_0014
PENT384676 PSEEN0023PSEEN0026PSEEN0025PSEEN0024PSEEN0022
PCRY335284 PCRYO_2466PCRYO_2463PCRYO_0038PCRYO_2467
PCAR338963 PCAR_0241PCAR_0408PCAR_0245PCAR_0244
PATL342610 PATL_0021PATL_0025PATL_0023PATL_0022PATL_0020
PARC259536 PSYC_2138PSYC_2135PSYC_0030PSYC_2139
PAER208964 PA0017PA0021PA0019PA0018PA0016
PAER208963 PA14_00180PA14_00230PA14_00200PA14_00190PA14_00170
OCAR504832 OCAR_4335OCAR_5785OCAR_7540OCAR_7539
OANT439375 OANT_1089OANT_3669OANT_1344OANT_1345OANT_2209
NWIN323098 NWI_0156NWI_2010NWI_3064NWI_3065
NSP103690 ALR0820ALL1325ALR3079ALR2111
NOCE323261 NOC_3016NOC_3012NOC_3014NOC_3015NOC_3020
NMUL323848 NMUL_A0392NMUL_A0395NMUL_A0394NMUL_A0393
NMEN374833 NMCC_2036NMCC_2032NMCC_2039NMCC_2038NMCC_1520
NMEN272831 NMC0104NMC0108NMC0102NMC0103NMC1535
NMEN122587 NMA0162NMA0158NMA0164NMA0163NMA1813
NMEN122586 NMB_0112NMB_0116NMB_0110NMB_0111NMB_1614
NHAM323097 NHAM_0197NHAM_2285NHAM_3693NHAM_3694
NGON242231 NGO1869NGO1865NGO1871NGO1870NGO1154
NEUT335283 NEUT_0390NEUT_0394NEUT_0392NEUT_0391NEUT_1132
NEUR228410 NE1972NE1968NE1970NE1971NE1834
NARO279238 SARO_3096SARO_1801SARO_2896SARO_2894
MTHE264732 MOTH_0900MOTH_1025MOTH_0897MOTH_0898MOTH_1794
MSUC221988 MS2203MS0041MS2201MS2202MS2195
MSP409 M446_2963M446_4345M446_4240M446_4239
MSP400668 MMWYL1_0015MMWYL1_0018MMWYL1_0017MMWYL1_0016MMWYL1_0014
MSP266779 MESO_3418MESO_1356MESO_0394MESO_0393MESO_1615
MPET420662 MPE_A0272MPE_A0281MPE_A0283MPE_A0284
MMAR394221 MMAR10_2924MMAR10_1716MMAR10_0442MMAR10_0446MMAR10_1445
MMAG342108 AMB0147AMB0681AMB0243AMB0242AMB2370
MLOT266835 MLR4098MLR0689MLL4855MLL4854
MFLA265072 MFLA_0184MFLA_0189MFLA_0187MFLA_0186
MEXT419610 MEXT_0551MEXT_3315MEXT_1636MEXT_1635
MCAP243233 MCA_2845MCA_2841MCA_2843MCA_2844MCA_2849
MAQU351348 MAQU_0041MAQU_0045MAQU_0043MAQU_0042MAQU_0040
LPNE400673 LPC_0549LPC_0545LPC_0547LPC_0548
LPNE297246 LPP2646LPP2650LPP2648LPP2647
LPNE297245 LPL2516LPL2520LPL2518LPL2517
LPNE272624 LPG2593LPG2597LPG2595LPG2594
LINT363253 LI0110LI0767LI0766LI0774
LCHO395495 LCHO_4003LCHO_0348LCHO_0350LCHO_0351LCHO_4070
KPNE272620 GKPORF_B3029GKPORF_B3026GKPORF_B3027GKPORF_B3028GKPORF_B3030
JSP375286 MMA_0158MMA_0141MMA_0143MMA_0144
JSP290400 JANN_4040JANN_3158JANN_0466JANN_0469JANN_2242
ILOI283942 IL0016IL0019IL0018IL0017IL0015
HSOM228400 HSM_1932HSM_0737HSM_1934HSM_1933HSM_1931
HSOM205914 HS_0039HS_0412HS_0041HS_0040HS_0038
HNEP81032 HNE_2148HNE_0512HNE_0513HNE_2008
HINF71421 HI_0624HI_0985HI_0622HI_0623HI_0625
HINF374930 CGSHIEE_09110CGSHIEE_07040CGSHIEE_09120CGSHIEE_09115CGSHIEE_09105
HINF281310 NTHI0723NTHI1157NTHI0725NTHI0724NTHI0722
HHAL349124 HHAL_2321HHAL_2324HHAL_2323HHAL_2322
HDUC233412 HD_1992HD_1888HD_1889HD_2029HD_1991
HCHE349521 HCH_00028HCH_00032HCH_00030HCH_00029HCH_00027
HARS204773 HEAR0133HEAR0116HEAR0118HEAR0119
GURA351605 GURA_0193GURA_3690GURA_0818GURA_0819
GTHE420246 GTNG_1026GTNG_1063GTNG_1024GTNG_1025
GSUL243231 GSU_3373GSU_2550GSU_0129GSU_0130
GOXY290633 GOX1597GOX1264GOX1836GOX1835
GMET269799 GMET_0066GMET_0890GMET_3338GMET_3339
GKAU235909 GK1173GK1210GK1171GK1172
GBET391165 GBCGDNIH1_1754GBCGDNIH1_0805GBCGDNIH1_0693GBCGDNIH1_0691
FTUL418136 FTW_0506FTW_1356FTW_1942FTW_0818FTW_0871
FTUL401614 FTN_1347FTN_0345FTN_0110FTN_0803FTN_0849
FTUL393115 FTF1383FTF1675FTF0925FTF0969C
FRANT SUNDEF2FMTTRKA
FPHI484022 FPHI_1340FPHI_0479FPHI_0717FPHI_1814FPHI_1765
ESP42895 ENT638_3720ENT638_3717ENT638_3718ENT638_3719ENT638_3721
ELIT314225 ELI_11295ELI_04800ELI_02080ELI_02065
EFER585054 EFER_3272EFER_3269EFER_3270EFER_3271EFER_3273
ECOO157 SUNSMFDEFFMTTRKA
ECOL83334 ECS4154ECS4151ECS4152ECS4153ECS4155
ECOL585397 ECED1_3952ECED1_3949ECED1_3950ECED1_3951ECED1_3953
ECOL585057 ECIAI39_3783ECIAI39_3781ECIAI39_3782ECIAI39_3784
ECOL585056 ECUMN_3762ECUMN_3759ECUMN_3760ECUMN_3761ECUMN_3763
ECOL585055 EC55989_3705EC55989_3702EC55989_3703EC55989_3704EC55989_3706
ECOL585035 ECS88_3676ECS88_3673ECS88_3674ECS88_3675ECS88_3677
ECOL585034 ECIAI1_3438ECIAI1_3435ECIAI1_3436ECIAI1_3437ECIAI1_3439
ECOL481805 ECOLC_0425ECOLC_0428ECOLC_0427ECOLC_0426ECOLC_0424
ECOL469008 ECBD_0463ECBD_0466ECBD_0465ECBD_0464ECBD_0462
ECOL439855 ECSMS35_3584ECSMS35_3581ECSMS35_3582ECSMS35_3583ECSMS35_3585
ECOL413997 ECB_03139ECB_03136ECB_03137ECB_03138ECB_03140
ECOL409438 ECSE_3563ECSE_3560ECSE_3561ECSE_3562ECSE_3564
ECOL405955 APECO1_3158APECO1_3161APECO1_3160APECO1_3159APECO1_3157
ECOL364106 UTI89_C3733UTI89_C3730UTI89_C3731UTI89_C3732UTI89_C3734
ECOL362663 ECP_3376ECP_3373ECP_3374ECP_3375ECP_3377
ECOL331111 ECE24377A_3771ECE24377A_3768ECE24377A_3769ECE24377A_3770ECE24377A_3772
ECOL316407 ECK3275:JW3250:B3289ECK3272:JW5708:B4473ECK3273:JW3248:B3287ECK3274:JW3249:B3288ECK3276:JW3251:B3290
ECOL199310 C4049C4046C4047C4048C4050
ECAR218491 ECA4001ECA3998ECA3999ECA4000ECA4002
DSP255470 CBDBA675CBDBA733CBDBA1742CBDBA37
DSP216389 DEHABAV1_0653DEHABAV1_0687DEHABAV1_1386DEHABAV1_0029
DSHI398580 DSHI_3033DSHI_1138DSHI_0179DSHI_0181DSHI_1569
DRED349161 DRED_1707DRED_1985DRED_1704DRED_1705DRED_2911
DPSY177439 DP0124DP0794DP0746DP0747DP0724
DOLE96561 DOLE_2231DOLE_2444DOLE_2233DOLE_2232DOLE_3218
DNOD246195 DNO_0158DNO_0154DNO_0156DNO_0157
DHAF138119 DSY2692DSY2555DSY2694DSY2693DSY1755
DETH243164 DET_0718DET_0760DET_1642DET_0030
DDES207559 DDE_1581DDE_0013DDE_0014DDE_2030
DARO159087 DARO_0028DARO_0019DARO_0021DARO_0022
CVIO243365 CV_4262CV_4267CV_4265CV_4264
CTET212717 CTC_01222CTC_01258CTC_01219CTC_01220CTC_00236
CSP78 CAUL_4779CAUL_1508CAUL_4570CAUL_4568
CSP501479 CSE45_0977CSE45_0263CSE45_0078CSE45_1385
CSAL290398 CSAL_2869CSAL_2865CSAL_2867CSAL_2868CSAL_2872
CRUT413404 RMAG_0209RMAG_0967RMAG_0785RMAG_0363
CPSY167879 CPS_0018CPS_0022CPS_0020CPS_0019CPS_0017
CPER289380 CPR_1712CPR_1675CPR_1715CPR_1714
CPER195103 CPF_1994CPF_1957CPF_1997CPF_1996
CPER195102 CPE1741CPE1703CPE1744CPE1743
CNOV386415 NT01CX_2242NT01CX_2152NT01CX_2245NT01CX_2244
CKLU431943 CKL_1372CKL_1414CKL_1369CKL_1370
CJAP155077 CJA_3580CJA_3585CJA_3582CJA_3581CJA_3579
CHYD246194 CHY_1481CHY_1795CHY_1484CHY_1483
CDIF272563 CD2581CD1273CD2585CD2584
CDES477974 DAUD_1591DAUD_0599DAUD_1592DAUD_0266
CBUR434922 COXBU7E912_0205COXBU7E912_2098COXBU7E912_1053COXBU7E912_2096
CBUR360115 COXBURSA331_A2118COXBURSA331_A0088COXBURSA331_A0945COXBURSA331_A0090
CBUR227377 CBU_1915CBU_1998CBU_0993CBU_1997
CBOT536232 CLM_2807CLM_2731CLM_2810CLM_2809CLM_1493
CBOT515621 CLJ_B2737CLJ_B2663CLJ_B2740CLJ_B2739CLJ_B1431
CBOT508765 CLL_A1218CLL_A1255CLL_A1215CLL_A1216
CBOT498213 CLD_2130CLD_2202CLD_2127CLD_2128CLD_3241
CBOT441772 CLI_2568CLI_2494CLI_2571CLI_2570CLI_1411
CBOT441771 CLC_2362CLC_2286CLC_2365CLC_2364
CBOT441770 CLB_2380CLB_2302CLB_2383CLB_2382CLB_1345
CBOT36826 CBO2507CBO2438CBO2510CBO2509CBO1318
CBEI290402 CBEI_1148CBEI_1185CBEI_1145CBEI_1146
CAULO CC0102CC2447CC0272CC0279
CACE272562 CAC1725CAC1784CAC1722CAC1723
BWEI315730 BCERKBAB4_3688BCERKBAB4_3657BCERKBAB4_3690BCERKBAB4_3689
BVIE269482 BCEP1808_3282BCEP1808_3287BCEP1808_3286BCEP1808_3285
BTRI382640 BT_2570BT_1136BT_0079BT_0078BT_0874
BTHU412694 BALH_3496BALH_3465BALH_3498BALH_3497
BTHU281309 BT9727_3606BT9727_3575BT9727_3608BT9727_3607
BTHE226186 BT_3070BT_0420BT_3945BT_4098
BTHA271848 BTH_I0132BTH_I0127BTH_I0128BTH_I0129
BSUI470137 BSUIS_B1292BSUIS_B0599BSUIS_B1030BSUIS_B1029
BSUI204722 BR_1814BR_A0602BR_A1035BR_A1034BR_1114
BSUB BSU15740BSU16110BSU15720BSU15730
BSP376 BRADO0340BRADO4506BRADO0770BRADO0771
BSP36773 BCEP18194_A6474BCEP18194_A6479BCEP18194_A6478BCEP18194_A6477
BQUI283165 BQ06410BQ00690BQ00680BQ05020
BPUM315750 BPUM_1473BPUM_1509BPUM_1471BPUM_1472
BPSE320372 BURPS1710B_A0374BURPS1710B_A0366BURPS1710B_A0368BURPS1710B_A0369
BPSE272560 BPSL0125BPSL0120BPSL0121BPSL0122
BPET94624 BPET4711BPET4728BPET4727BPET4726BPET4707
BPER257313 BP0569BP0555BP0552BP0551BP0573
BPAR257311 BPP0259BPP0240BPP0243BPP0244BPP0263
BOVI236 GBOORF1819GBOORFA0620GBOORFA1069GBOORFA1068GBOORF1114
BMEL359391 BAB1_1822BAB2_0638BAB2_0997BAB2_0996BAB1_1137
BMEL224914 BMEI0235BMEII0667BMEII0264BMEII0265BMEI0869
BMAL320389 BMA10247_2357BMA10247_2350BMA10247_2352BMA10247_2353
BMAL320388 BMASAVP1_A2801BMASAVP1_A2808BMASAVP1_A2806BMASAVP1_A2805
BMAL243160 BMA_0146BMA_0141BMA_0142BMA_0143
BLIC279010 BL02299BL01283BL02297BL02298
BJAP224911 BLR0579BLR5104BLL8109BLL8108
BHEN283166 BH15990BH08170BH00760BH00750BH05860
BCLA66692 ABC2317ABC2279ABC2318ABC2426
BCER572264 BCA_3965BCA_3933BCA_3967BCA_3966
BCER405917 BCE_3907BCE_3876BCE_3910BCE_3908
BCER315749 BCER98_2517BCER98_2486BCER98_2519BCER98_2518
BCER288681 BCE33L3624BCE33L3593BCE33L3626BCE33L3625
BCER226900 BC_3863BC_3832BC_3865BC_3864
BCEN331272 BCEN2424_3123BCEN2424_3128BCEN2424_3127BCEN2424_3126
BCEN331271 BCEN_2509BCEN_2514BCEN_2513BCEN_2512
BCAN483179 BCAN_A1852BCAN_B0603BCAN_B1055BCAN_B1054BCAN_A1133
BBRO257310 BB0262BB0244BB0247BB0248BB0266
BBAC360095 BARBAKC583_0072BARBAKC583_0842BARBAKC583_1319BARBAKC583_1320BARBAKC583_0544
BAMY326423 RBAM_015570RBAM_015940RBAM_015550RBAM_015560
BAMB398577 BAMMC406_3061BAMMC406_3066BAMMC406_3065BAMMC406_3064
BAMB339670 BAMB_3178BAMB_3183BAMB_3182BAMB_3181
BABO262698 BRUAB1_1794BRUAB2_0622BRUAB2_0975BRUAB2_0974BRUAB1_1120
AVAR240292 AVA_4428AVA_3792AVA_0830AVA_1067
ASP76114 EBA2833EBA2961EBB91EBA2954EBA2825
ASP62977 ACIAD3638ACIAD0209ACIAD0211ACIAD3637
ASP62928 AZO3985AZO0097AZO0099AZO0100AZO3981
ASP232721 AJS_3894AJS_4049AJS_4051AJS_4053AJS_3912
ASAL382245 ASA_4142ASA_4138ASA_4140ASA_4141ASA_4143
APLE434271 APJL_1588APJL_1744APJL_1743APJL_1620APJL_1587
APLE416269 APL_1560APL_1712APL_1711APL_1587APL_1559
AORE350688 CLOS_1431CLOS_1473CLOS_1427CLOS_1428CLOS_0673
AMET293826 AMET_2782AMET_2736AMET_2786AMET_2785AMET_4416
AHYD196024 AHA_0256AHA_0260AHA_0258AHA_0257AHA_0255
AFER243159 AFE_3003AFE_3007AFE_3005AFE_3004
AEHR187272 MLG_2626MLG_2630MLG_2628MLG_2627MLG_2622
ACRY349163 ACRY_2654ACRY_0730ACRY_0409ACRY_0410
ACAU438753 AZC_4698AZC_2848AZC_0798AZC_0797AZC_3082
ABOR393595 ABO_0129ABO_0133ABO_0131ABO_0130ABO_0128
ABAU360910 BAV0228BAV0198BAV0202BAV0203BAV0232
ABAC204669 ACID345_4229ACID345_3341ACID345_4287ACID345_4228
AAVE397945 AAVE_4528AAVE_4686AAVE_4688AAVE_4690AAVE_4544


Organism features enriched in list (features available for 307 out of the 329 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000126176112
Disease:Pneumonia 0.00458541112
Endospores:No 6.239e-1370211
GC_Content_Range4:0-40 4.940e-1469213
GC_Content_Range4:40-60 2.893e-7147224
GC_Content_Range4:60-100 0.001458091145
GC_Content_Range7:0-30 0.00056041447
GC_Content_Range7:30-40 1.267e-955166
GC_Content_Range7:50-60 4.454e-881107
GC_Content_Range7:60-70 0.000021191134
Genome_Size_Range5:0-2 8.155e-2924155
Genome_Size_Range5:4-6 1.292e-18145184
Genome_Size_Range9:1-2 5.413e-1924128
Genome_Size_Range9:4-5 3.583e-97696
Genome_Size_Range9:5-6 4.945e-86988
Genome_Size_Range9:6-8 0.00125052938
Gram_Stain:Gram_Neg 1.892e-18227333
Gram_Stain:Gram_Pos 5.545e-656150
Habitat:Host-associated 0.001171892206
Habitat:Multiple 0.0000217116178
Habitat:Specialized 0.00081101753
Motility:No 3.267e-851151
Motility:Yes 1.641e-9176267
Optimal_temp.:25-30 3.888e-61919
Optimal_temp.:35-37 0.00021171313
Oxygen_Req:Facultative 0.0000740127201
Shape:Coccobacillus 0.00079191111
Shape:Coccus 0.00504923382
Shape:Irregular_coccus 0.0004343217
Shape:Rod 3.476e-17232347
Shape:Sphere 0.0001159219
Shape:Spiral 2.419e-6534
Temp._range:Hyperthermophilic 0.0003713423
Temp._range:Psychrophilic 0.002942999
Temp._range:Thermophilic 0.00488291135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 160
Effective number of orgs (counting one per cluster within 468 clusters): 136

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 51
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSOL273057 ncbi Sulfolobus solfataricus P20
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SARE391037 ncbi Salinispora arenicola CNS-2051
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RMAS416276 ncbi Rickettsia massiliae MTU51
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PGIN242619 ncbi Porphyromonas gingivalis W831
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN0
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GFOR411154 ncbi Gramella forsetii KT08031
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  EG12163   EG11604   EG11440   EG11268   EG11019   
WSUC273121 WS2212
WPIP80849 WB_0187
UURE95667
UURE95664
UPAR505682
UMET351160 RRC458
TWHI218496
TWHI203267
TVOL273116
TPEN368408 TPEN_1198
TDEN326298 TMDEN_2034
TACI273075
STOK273063
SSUI391295 SSU05_0426
SSP84588 SYNW1679OR3038
SSP64471 GSYN0731
SSOL273057
SERY405948 SACE_1811
SARE391037 SARE_1451
SACI330779
RTYP257363 RT0197
RSP101510 RHA1_RO06834
RSAL288705 RSAL33209_2401
RRIC392021 A1G_01595
RMAS416276 RMA_0279
RBEL391896 A1I_03205
RALB246199 GRAORF_1844
RAKA293614 A1C_01560
PTOR263820
PRUM264731 GFRORF2882
PMAR74547 PMT0270
PISL384616
PINT246198 PIN_A0390
PGIN242619 PG_2218
PDIS435591 BDI_2663
PAST100379
PARS340102
PAER178306
PACN267747 PPA1058
NSEN222891
NPHA348780 NP4902A
MVAN350058 MVAN_2473
MTUB419947 MRA_2720
MTUB336982 TBFG_12707
MTHE349307 MTHE_0819
MTHE187420 MTH1265
MTBRV RV2692
MTBCDC MT2766
MSYN262723
MSTA339860 MSP_0250
MSP189918 MKMS_2242
MSP164757 MJLS_2185
MSP164756 MMCS_2196
MSME246196 MSMEG_2769
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2501
MMAR444158 MMARC6_1071
MMAR426368 MMARC7_0846
MMAR402880 MMARC5_1809
MMAR368407 MEMAR_0505
MMAR267377 MMP1599
MLEP272631
MJAN243232 MJ_1105
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0638
MGIL350054 MFLV_3927
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1310
MBOV410289 BCG_2705
MBOV233413 MB2711
MBAR269797 MBAR_A3430
MAVI243243 MAV_3583
MART243272
MAEO419665
MACE188937 MA1480
MABS561007 MAB_2995
LXYL281090
LLAC272623
LLAC272622 LACR_1305
LINT267671
LINT189518
LBOR355277
LBOR355276
LBIF456481
LBIF355278
IHOS453591 IGNI_0236
HWAL362976 HQ1685A
HSP64091 VNG6175G
HSAL478009 OE5298F
HPYL85963 JHP0729
HPYL357544 HPAG1_0778
HPY HP0793
HMUK485914 HMUK_1877
HMAR272569 RRNAC1536
HHEP235279 HH_0569
HACI382638 HAC_0915
GFOR411154 GFO_0389
FSP1855 FRANEAN1_5192
FSP106370 FRANCCI3_1322
FJOH376686
FALN326424 FRAAL2084
ECHA205920 ECH_0883
DRAD243230 DR_0120
DGEO319795 DGEO_2345
CTRA471473
CTRA471472
CSUL444179
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMIC443906
CMIC31964
CMET456442 MBOO_1944
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHOM360107 CHAB381_0018
CGLU196627 CG1802
CFET360106 CFF8240_1690
CFEL264202
CEFF196164 CE1718
CDIP257309 DIP1321
CCUR360105 CCV52592_1501
CCON360104 CCC13826_1783
CCAV227941
CABO218497
BXEN266265
BTUR314724
BLON206672 BL1789
BHER314723
BGAR290434
BBUR224326
BAPH372461 BCC_313
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_1640
APER272557
ANAE240017 ANA_0621
ALAI441768
AFUL224325 AF_0838
ACEL351607 ACEL_1398
ABUT367737 ABU_1700
AAUR290340 AAUR_1784


Organism features enriched in list (features available for 150 out of the 160 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00176311392
Arrangment:Pairs 0.000033113112
Arrangment:Singles 0.000325391286
Disease:Leptospirosis 0.004252744
Disease:Pharyngitis 0.000016788
Disease:bronchitis_and_pneumonitis 0.000016788
Endospores:No 8.489e-1797211
Endospores:Yes 0.0000820353
GC_Content_Range4:0-40 0.002813468213
GC_Content_Range4:40-60 0.005881946224
GC_Content_Range7:0-30 0.00020912347
GC_Content_Range7:50-60 0.001475216107
Genome_Size_Range5:0-2 1.981e-1172155
Genome_Size_Range5:4-6 1.182e-821184
Genome_Size_Range9:0-1 6.960e-102227
Genome_Size_Range9:1-2 0.000065950128
Genome_Size_Range9:4-5 0.00033641296
Genome_Size_Range9:5-6 0.0000707988
Gram_Stain:Gram_Neg 4.808e-760333
Habitat:Host-associated 0.000156371206
Habitat:Multiple 0.000073828178
Motility:No 0.000117356151
Motility:Yes 0.004092056267
Optimal_temp.:37 0.000036644106
Oxygen_Req:Facultative 1.956e-727201
Oxygen_Req:Microaerophilic 0.00021011218
Salinity:Non-halophilic 0.003430238106
Shape:Irregular_coccus 0.00057051117
Shape:Rod 1.218e-958347
Shape:Sphere 8.535e-81619
Shape:Spiral 1.702e-112734



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462170.5729
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951820.5479
PWY-5918 (heme biosynthesis I)2722260.5339
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862320.5224
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002380.5121
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491460.5074
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181890.4980
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251910.4832
PWY-4041 (γ-glutamyl cycle)2792220.4828
PWY-5386 (methylglyoxal degradation I)3052350.4755
TYRFUMCAT-PWY (tyrosine degradation I)1841640.4710
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831630.4685
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912260.4661
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392510.4647
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962270.4551
PWY-5028 (histidine degradation II)1301260.4538
PWY-1269 (CMP-KDO biosynthesis I)3252420.4530
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482520.4418
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911640.4403
ARO-PWY (chorismate biosynthesis I)5103220.4395
PWY0-862 (cis-dodecenoyl biosynthesis)3432490.4387
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902200.4309
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491970.4300
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491970.4300
PWY-5913 (TCA cycle variation IV)3012250.4250
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081720.4238
PROSYN-PWY (proline biosynthesis I)4753060.4167
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582990.4163
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002230.4155
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551980.4142
THISYN-PWY (thiamin biosynthesis I)5023160.4137
VALDEG-PWY (valine degradation I)2902170.4116
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222820.4068
MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)3922680.4060
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162790.4049
METSYN-PWY (homoserine and methionine biosynthesis)3972700.4036
PWY-5686 (uridine-5'-phosphate biosynthesis)5263230.4011



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11604   EG11440   EG11268   EG11019   
EG121630.999660.9998490.9999450.999598
EG116040.9997880.9997450.999341
EG114400.9999890.999459
EG112680.999513
EG11019



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PAIRWISE BLAST SCORES:

  EG12163   EG11604   EG11440   EG11268   EG11019   
EG121630.0f0----
EG11604-0.0f0---
EG11440--0.0f0--
EG11268---0.0f0-
EG11019----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11019 EG11268 EG11440 EG11604 EG12163 (centered at EG11268)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12163   EG11604   EG11440   EG11268   EG11019   
396/623411/623378/623410/623308/623
AAEO224324:0:Tyes--01087-
AAUR290340:2:Tyes----0
AAVE397945:0:Tyes015615816016
ABAC204669:0:Tyes8980958897-
ABAU360910:0:Tyes3004534
ABOR393595:0:Tyes15320
ABUT367737:0:Tyes--0--
ACAU438753:0:Tyes39572077102312
ACEL351607:0:Tyes----0
ACRY349163:8:Tyes225332001-
ADEH290397:0:Tyes-199703278-
AEHR187272:0:Tyes48650
AFER243159:0:Tyes0421-
AFUL224325:0:Tyes----0
AHYD196024:0:Tyes15320
AMAR234826:0:Tyes-0654--
AMAR329726:9:Tyes9410---
AMET293826:0:Tyes45049481688
ANAE240017:0:Tyes----0
AORE350688:0:Tyes7477897437440
APHA212042:0:Tyes-0398--
APLE416269:0:Tyes1159158290
APLE434271:0:Tno1163162340
ASAL382245:5:Tyes40235
ASP1667:3:Tyes----0
ASP232721:2:Tyes016216416626
ASP62928:0:Tyes39500233946
ASP62977:0:Tyes3176023175-
ASP76114:2:Tyes48078770
AVAR240292:3:Tyes360729710-239
BABO262698:0:Tno-0326325-
BABO262698:1:Tno665---0
BAMB339670:3:Tno0543-
BAMB398577:3:Tno0543-
BAMY326423:0:Tyes23901-
BANT260799:0:Tno0-21-
BANT261594:2:Tno0-21-
BANT568206:2:Tyes2-01-
BANT592021:2:Tno0-21-
BAPH198804:0:Tyes--01-
BAPH372461:0:Tyes--0--
BBAC264462:0:Tyes--10-
BBAC360095:0:Tyes072111611162450
BBRO257310:0:Tyes1803422
BCAN483179:0:Tno-0423422-
BCAN483179:1:Tno687---0
BCEN331271:2:Tno0543-
BCEN331272:3:Tyes0543-
BCER226900:1:Tyes3103332-
BCER288681:0:Tno3103332-
BCER315749:1:Tyes3103332-
BCER405917:1:Tyes3103432-
BCER572264:1:Tno3103332-
BCIC186490:0:Tyes--10-
BCLA66692:0:Tyes380-39147
BFRA272559:1:Tyes---28180
BFRA295405:0:Tno---30680
BHAL272558:0:Tyes390-40-
BHEN283166:0:Tyes140570210490
BJAP224911:0:Fyes0455675797578-
BLIC279010:0:Tyes23801-
BLON206672:0:Tyes---0-
BMAL243160:1:Tno5012-
BMAL320388:1:Tno0754-
BMAL320389:1:Tyes7023-
BMEL224914:0:Tno-40901-
BMEL224914:1:Tno0---650
BMEL359391:0:Tno-0323322-
BMEL359391:1:Tno639---0
BOVI236:0:Tyes-0351350-
BOVI236:1:Tyes597---0
BPAR257311:0:Tno1903423
BPER257313:0:Tyes1741021
BPET94624:0:Tyes42120190
BPSE272560:1:Tyes5012-
BPSE320372:1:Tno8023-
BPSE320373:1:Tno5-01-
BPUM315750:0:Tyes23801-
BQUI283165:0:Tyes-51110395
BSP107806:2:Tyes--01-
BSP36773:2:Tyes0543-
BSP376:0:Tyes03955395396-
BSUB:0:Tyes24001-
BSUI204722:0:Tyes-0408407-
BSUI204722:1:Tyes675---0
BSUI470137:0:Tno6550400399-
BTHA271848:1:Tno5012-
BTHE226186:0:Tyes-2713036003755
BTHU281309:1:Tno3103332-
BTHU412694:1:Tno3103332-
BTRI382640:1:Tyes195293410704
BVIE269482:7:Tyes0543-
BWEI315730:4:Tyes3103332-
CACE272562:1:Tyes36101-
CAULO:0:Tyes02381171178-
CBEI290402:0:Tyes34001-
CBLO203907:0:Tyes--10-
CBLO291272:0:Tno--10-
CBOT36826:1:Tno11781112118111800
CBOT441770:0:Tyes1014943101710160
CBOT441771:0:Tno7007372-
CBOT441772:1:Tno11281061113111300
CBOT498213:1:Tno11001030110311020
CBOT508765:1:Tyes34001-
CBOT515621:2:Tyes12851211128812870
CBOT536232:0:Tno12781206128112800
CBUR227377:1:Tyes8929730972-
CBUR360115:1:Tno192108092-
CBUR434922:2:Tno018098091807-
CCHL340177:0:Tyes0331---
CCON360104:2:Tyes--0--
CCUR360105:0:Tyes--0--
CDES477974:0:Tyes1294308-12950
CDIF272563:1:Tyes1330013341333-
CDIP257309:0:Tyes0----
CEFF196164:0:Fyes0----
CFET360106:0:Tyes--0--
CGLU196627:0:Tyes0----
CHOM360107:1:Tyes--0--
CHUT269798:0:Tyes--0861-
CHYD246194:0:Tyes030232-
CJAP155077:0:Tyes15320
CKLU431943:1:Tyes34501-
CMET456442:0:Tyes----0
CNOV386415:0:Tyes9009392-
CPEL335992:0:Tyes--0-493
CPER195102:1:Tyes3804140-
CPER195103:0:Tno3704039-
CPER289380:3:Tyes3704039-
CPHY357809:0:Tyes-23210-
CPRO264201:0:Fyes-0-340-
CPSY167879:0:Tyes15320
CRUT413404:0:Tyes0-703530142
CSAL290398:0:Tyes40237
CSP501479:8:Fyes-88618101290
CSP78:2:Tyes3304030943092-
CTEP194439:0:Tyes3440---
CTET212717:0:Tyes9079419049050
CVES412965:0:Tyes--5083620
CVIO243365:0:Tyes0532-
DARO159087:0:Tyes9023-
DDES207559:0:Tyes-1588012049
DETH243164:0:Tyes-67470815490
DGEO319795:1:Tyes-0---
DHAF138119:0:Tyes9448079469450
DNOD246195:0:Tyes4023-
DOLE96561:0:Tyes0215211001
DPSY177439:2:Tyes0693645646612
DRAD243230:3:Tyes-0---
DRED349161:0:Tyes3273011213
DSHI398580:5:Tyes2894978021413
DSP216389:0:Tyes-62666713920
DSP255470:0:Tno-53960114780
DVUL882:1:Tyes-012921291-
ECAN269484:0:Tyes-1840--
ECAR218491:0:Tyes30124
ECHA205920:0:Tyes-0---
ECOL199310:0:Tno30124
ECOL316407:0:Tno14320
ECOL331111:6:Tno30124
ECOL362663:0:Tno30124
ECOL364106:1:Tno30124
ECOL405955:2:Tyes30124
ECOL409438:6:Tyes30124
ECOL413997:0:Tno30124
ECOL439855:4:Tno30124
ECOL469008:0:Tno14320
ECOL481805:0:Tno14320
ECOL585034:0:Tno30124
ECOL585035:0:Tno30124
ECOL585055:0:Tno30124
ECOL585056:2:Tno30124
ECOL585057:0:Tno2-013
ECOL585397:0:Tno30124
ECOL83334:0:Tno30124
ECOLI:0:Tno30124
ECOO157:0:Tno30124
EFAE226185:3:Tyes13760-1377-
EFER585054:1:Tyes30124
ELIT314225:0:Tyes187355630-
ERUM254945:0:Tyes-1840--
ERUM302409:0:Tno-1810--
ESP42895:1:Tyes30124
FALN326424:0:Tyes----0
FMAG334413:1:Tyes-1390--
FNOD381764:0:Tyes-0--107
FNUC190304:0:Tyes-826-12470
FPHI484022:1:Tyes894024413791329
FRANT:0:Tno426-692038
FSP106370:0:Tyes----0
FSP1855:0:Tyes----0
FSUC59374:0:Tyes-0-1823-
FTUL351581:0:Tno--010701028
FTUL393011:0:Tno--0987946
FTUL393115:0:Tyes413-675037
FTUL401614:0:Tyes12272330686732
FTUL418136:0:Tno07161189286323
FTUL458234:0:Tno--01022984
GBET391165:0:Tyes106311410-
GFOR411154:0:Tyes----0
GKAU235909:1:Tyes23901-
GMET269799:1:Tyes082632773278-
GOXY290633:5:Tyes3270566565-
GSUL243231:0:Tyes3226240901-
GTHE420246:1:Tyes23901-
GURA351605:0:Tyes03482624625-
GVIO251221:0:Tyes-047170-
HACI382638:1:Tyes--0--
HARS204773:0:Tyes16023-
HAUR316274:2:Tyes-1224-15130
HBUT415426:0:Tyes0---394
HCHE349521:0:Tyes15320
HDUC233412:0:Tyes960112595
HHAL349124:0:Tyes0321-
HHEP235279:0:Tyes--0--
HINF281310:0:Tyes1400320
HINF374930:0:Tyes3760378377375
HINF71421:0:Tno2361013
HMAR272569:8:Tyes----0
HMOD498761:0:Tyes-7801-
HMUK485914:1:Tyes----0
HNEP81032:0:Tyes-1609011471
HPY:0:Tno--0--
HPYL357544:1:Tyes--0--
HPYL85963:0:Tno--0--
HSAL478009:3:Tyes----0
HSOM205914:1:Tyes1378320
HSOM228400:0:Tno12050120712061204
HSP64091:1:Tno----0
HWAL362976:1:Tyes----0
IHOS453591:0:Tyes----0
ILOI283942:0:Tyes14320
JSP290400:1:Tyes36182722031789
JSP375286:0:Tyes17023-
KPNE272620:2:Tyes30124
KRAD266940:2:Fyes---31400
LACI272621:0:Tyes-0-318-
LBRE387344:2:Tyes1590-160-
LCAS321967:1:Tyes2230---
LCHO395495:0:Tyes36860233751
LDEL321956:0:Tyes-0-110-
LDEL390333:0:Tyes-0-118-
LGAS324831:0:Tyes1152-0-
LHEL405566:0:Tyes-0-265-
LINN272626:1:Tno6490-650-
LINT363253:3:Tyes-0654653661
LJOH257314:0:Tyes3800-381-
LLAC272622:5:Tyes-0---
LMES203120:1:Tyes2310---
LMON169963:0:Tno5760-577-
LMON265669:0:Tyes5530-554-
LPLA220668:0:Tyes1193-0-
LPNE272624:0:Tno0421-
LPNE297245:1:Fno0421-
LPNE297246:1:Fyes0421-
LPNE400673:0:Tno4023-
LREU557436:0:Tyes3990---
LSAK314315:0:Tyes1301-0-
LSPH444177:1:Tyes148-0-
LWEL386043:0:Tyes5500-551-
MABS561007:1:Tyes----0
MACE188937:0:Tyes----0
MAER449447:0:Tyes499501175--
MAQU351348:2:Tyes15320
MAVI243243:0:Tyes----0
MBAR269797:1:Tyes----0
MBOV233413:0:Tno----0
MBOV410289:0:Tno----0
MBUR259564:0:Tyes----0
MCAP243233:0:Tyes40238
MEXT419610:0:Tyes0278611061105-
MFLA265072:0:Tyes0532-
MGIL350054:3:Tyes----0
MHUN323259:0:Tyes----0
MJAN243232:2:Tyes----0
MKAN190192:0:Tyes524---0
MLAB410358:0:Tyes---01285
MLOT266835:2:Tyes2638032233222-
MMAG342108:0:Tyes053496952223
MMAR267377:0:Tyes----0
MMAR368407:0:Tyes----0
MMAR394221:0:Tyes24701273041002
MMAR402880:1:Tyes----0
MMAR426368:0:Tyes----0
MMAR444158:0:Tyes----0
MMAZ192952:0:Tyes----0
MPET420662:1:Tyes091112-
MSME246196:0:Tyes----0
MSP164756:1:Tno----0
MSP164757:0:Tno----0
MSP189918:2:Tyes----0
MSP266779:3:Tyes3040972101234
MSP400668:0:Tyes14320
MSP409:2:Tyes0133012301229-
MSTA339860:0:Tyes----0
MSUC221988:0:Tyes22310222922302223
MTBCDC:0:Tno----0
MTBRV:0:Tno----0
MTHE187420:0:Tyes----0
MTHE264732:0:Tyes312501881
MTHE349307:0:Tyes----0
MTUB336982:0:Tno----0
MTUB419947:0:Tyes----0
MVAN350058:0:Tyes----0
MXAN246197:0:Tyes2-300-
NARO279238:0:Tyes1328011231121-
NEUR228410:0:Tyes1401361381390
NEUT335283:2:Tyes0421729
NFAR247156:2:Tyes-397--0
NGON242231:0:Tyes6696656716700
NHAM323097:2:Tyes0201333763377-
NMEN122586:0:Tno26011450
NMEN122587:0:Tyes40651563
NMEN272831:0:Tno26011267
NMEN374833:0:Tno5125085155140
NMUL323848:3:Tyes0321-
NOCE323261:1:Tyes40238
NPHA348780:2:Tyes----0
NSP103690:6:Tyes05082282-1307
NSP35761:1:Tyes-0--642
NSP387092:0:Tyes--0-1607
NWIN323098:0:Tyes0187929362937-
OANT439375:4:Tyes-0---
OANT439375:5:Tyes0-2632641147
OCAR504832:0:Tyes0145232033202-
OIHE221109:0:Tyes139-0-
OTSU357244:0:Fyes-0393392-
PABY272844:0:Tyes0---526
PACN267747:0:Tyes----0
PAER208963:0:Tyes15320
PAER208964:0:Tno15320
PARC259536:0:Tyes2133213002134-
PATL342610:0:Tyes15320
PCAR338963:0:Tyes017243-
PCRY335284:1:Tyes2421241802422-
PDIS435591:0:Tyes----0
PENT384676:0:Tyes14320
PFLU205922:0:Tyes15320
PFLU216595:1:Tyes15320
PFLU220664:0:Tyes15320
PFUR186497:0:Tyes5001155--0
PGIN242619:0:Tyes----0
PHAL326442:1:Tyes15320
PHOR70601:0:Tyes0---1195
PING357804:0:Tyes40235
PINT246198:1:Tyes----0
PLUM243265:0:Fyes30124
PLUT319225:0:Tyes01146---
PMAR146891:0:Tyes401-0--
PMAR167539:0:Tyes355-0--
PMAR167540:0:Tyes369-0--
PMAR167542:0:Tyes432-0--
PMAR167546:0:Tyes369-0--
PMAR167555:0:Tyes361-0--
PMAR59920:0:Tno337-0--
PMAR74546:0:Tyes365-0--
PMAR74547:0:Tyes0----
PMAR93060:0:Tyes43612070--
PMEN399739:0:Tyes15320
PMOB403833:0:Tyes--01-
PMUL272843:1:Tyes240014
PNAP365044:8:Tyes0253250249-
PPEN278197:0:Tyes1137-0-
PPRO298386:2:Tyes40235
PPUT160488:0:Tno14320
PPUT351746:0:Tyes14320
PPUT76869:0:Tno14320
PRUM264731:0:Tyes----0
PSP117:0:Tyes-1322--0
PSP296591:2:Tyes0205203202-
PSP312153:0:Tyes0321-
PSP56811:2:Tyes2394238902395-
PSTU379731:0:Tyes15320
PSYR205918:0:Tyes15320
PSYR223283:2:Tyes40235
PTHE370438:0:Tyes5490552551-
RAKA293614:0:Fyes--0--
RALB246199:0:Tyes---0-
RBEL336407:0:Tyes--01-
RBEL391896:0:Fno--0--
RCAN293613:0:Fyes--01-
RCAS383372:0:Tyes-0-30132451
RCON272944:0:Tno--01-
RDEN375451:4:Tyes013926376391964
RETL347834:5:Tyes3662121802-
REUT264198:3:Tyes0532-
REUT381666:2:Tyes0532-
RFEL315456:2:Tyes-20701-
RFER338969:1:Tyes0272270269-
RLEG216596:6:Tyes4298131603-
RMAS416276:1:Tyes--0--
RMET266264:2:Tyes0532-
RPAL258594:0:Tyes03108601602-
RPAL316055:0:Tyes03320625624-
RPAL316056:0:Tyes02217781784-
RPAL316057:0:Tyes650298310-
RPAL316058:0:Tyes02359598599-
RPOM246200:1:Tyes-970111111080
RPRO272947:0:Tyes--01-
RRIC392021:0:Fno--0--
RRIC452659:0:Tyes--01-
RRUB269796:1:Tyes19731508166316640
RSAL288705:0:Tyes----0
RSOL267608:1:Tyes7024-
RSP101510:3:Fyes----0
RSP357808:0:Tyes-2156-15030
RSPH272943:4:Tyes-017521755645
RSPH349101:2:Tno1933016971700607
RSPH349102:5:Tyes27532147031326
RTYP257363:0:Tno--0--
RXYL266117:0:Tyes-126--0
SACI56780:0:Tyes0426-11901
SAGA205921:0:Tno1685-01173
SAGA208435:0:Tno1671-01244
SAGA211110:0:Tyes1736-01325
SALA317655:1:Tyes80096320-
SARE391037:0:Tyes----0
SAUR158878:1:Tno130162-1290
SAUR158879:1:Tno127159-1260
SAUR196620:0:Tno131163-1300
SAUR273036:0:Tno124153-1230
SAUR282458:0:Tno133-0-
SAUR282459:0:Tno133-0-
SAUR359786:1:Tno1--0-
SAUR359787:1:Tno1--0-
SAUR367830:3:Tno133-0-
SAUR418127:0:Tyes133-0-
SAUR426430:0:Tno133-0-
SAUR93061:0:Fno142176-1410
SAUR93062:1:Tno135-0-
SAVE227882:1:Fyes-244-45650
SBAL399599:3:Tyes15320
SBAL402882:1:Tno15320
SBOY300268:1:Tyes30124
SCO:2:Fyes---04460
SDEG203122:0:Tyes15320
SDEN318161:0:Tyes15320
SDYS300267:1:Tyes30124
SELO269084:0:Tyes3716230181673
SENT209261:0:Tno14320
SENT220341:0:Tno14320
SENT295319:0:Tno30124
SENT321314:2:Tno30124
SENT454169:2:Tno30124
SEPI176279:1:Tyes107138-1060
SEPI176280:0:Tno107140-1060
SERY405948:0:Tyes----0
SFLE198214:0:Tyes30124
SFLE373384:0:Tno30124
SFUM335543:0:Tyes36401-
SGLO343509:3:Tyes2-013
SGOR29390:0:Tyes1583-01044
SHAE279808:0:Tyes330-34-
SHAL458817:0:Tyes15320
SHIGELLA:0:Tno30124
SLAC55218:1:Fyes11260166716692474
SLOI323850:0:Tyes40235
SMAR399550:0:Tyes0---868
SMED366394:3:Tyes3101874011030
SMEL266834:2:Tyes2957896011062
SMUT210007:0:Tyes1475-01120
SONE211586:1:Tyes15320
SPEA398579:0:Tno15320
SPNE1313:0:Tyes1129693-11300
SPNE170187:0:Tyes987487-9880
SPNE171101:0:Tno1158722-11590
SPNE487213:0:Tno1081409-10820
SPNE487214:0:Tno1205753-12060
SPNE488221:0:Tno1167739-11680
SPRO399741:1:Tyes30124
SPYO160490:0:Tno3760-377-
SPYO186103:0:Tno4450-446-
SPYO193567:0:Tno1541-0-
SPYO198466:0:Tno5520-553-
SPYO286636:0:Tno5150-516-
SPYO293653:0:Tno4590-460-
SPYO319701:0:Tyes5260-527-
SPYO370551:0:Tno3390-340-
SPYO370552:0:Tno4640-465-
SPYO370553:0:Tno4090-410-
SPYO370554:0:Tyes4220-423-
SRUB309807:1:Tyes0295398-1360
SSAP342451:2:Tyes360-37185
SSED425104:0:Tyes15320
SSON300269:1:Tyes30124
SSP1131:0:Tyes0-1456--
SSP1148:0:Tyes0419-19781784
SSP292414:2:Tyes02285253225291290
SSP321327:0:Tyes926228001491-
SSP321332:0:Tyes1254020421283-
SSP387093:0:Tyes--0-242
SSP644076:6:Fyes9580258255-
SSP644076:7:Fyes----0
SSP64471:0:Tyes0----
SSP84588:0:Tyes0----
SSP94122:1:Tyes15320
SSUI391295:0:Tyes0----
SSUI391296:0:Tyes0604---
STHE264199:0:Tyes1051574-10520
STHE292459:0:Tyes713801-
STHE299768:0:Tno1086606-10870
STHE322159:2:Tyes937526--0
STRO369723:0:Tyes386---0
STYP99287:1:Tyes30124
SWOL335541:0:Tyes379038338272
TCRU317025:0:Tyes47650
TDEN243275:0:Tyes-11101547-0
TDEN292415:0:Tyes40238
TDEN326298:0:Tyes--0--
TELO197221:0:Tyes01242-1692-
TERY203124:0:Tyes01923-855-
TFUS269800:0:Tyes--0-200
TKOD69014:0:Tyes347---0
TLET416591:0:Tyes-0--614
TMAR243274:0:Tyes123001379-820
TPAL243276:0:Tyes-0--119
TPEN368408:1:Tyes----0
TPET390874:0:Tno6240468-1000
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