Org ID | Org Name | # genes in group found in org |
YPSE349747 ncbi | Yersinia pseudotuberculosis IP 31758 | 4 |
YPSE273123 ncbi | Yersinia pseudotuberculosis IP 32953 | 4 |
YPES386656 ncbi | Yersinia pestis Pestoides F | 4 |
YPES377628 ncbi | Yersinia pestis Nepal516 | 4 |
YPES360102 ncbi | Yersinia pestis Antiqua | 4 |
YPES349746 ncbi | Yersinia pestis Angola | 4 |
YPES214092 ncbi | Yersinia pestis CO92 | 4 |
YPES187410 ncbi | Yersinia pestis KIM 10 | 4 |
YENT393305 ncbi | Yersinia enterocolitica enterocolitica 8081 | 4 |
XORY360094 ncbi | Xanthomonas oryzae pv. oryzae PXO99A | 4 |
XORY342109 ncbi | Xanthomonas oryzae pv. oryzae MAFF 311018 | 4 |
XORY291331 ncbi | Xanthomonas oryzae pv. oryzae KACC10331 | 4 |
XCAM487884 | Xanthomonas campestris pv. paulliniae | 4 |
XCAM316273 ncbi | Xanthomonas campestris pv. vesicatoria str. 85-10 | 4 |
XCAM314565 ncbi | Xanthomonas campestris pv. campestris str. 8004 | 4 |
XCAM190485 ncbi | Xanthomonas campestris pv. campestris str. ATCC 33913 | 4 |
XAXO190486 ncbi | Xanthomonas axonopodis pv. citri str. 306 | 4 |
XAUT78245 ncbi | Xanthobacter autotrophicus Py2 | 4 |
VVUL216895 ncbi | Vibrio vulnificus CMCP6 | 5 |
VVUL196600 ncbi | Vibrio vulnificus YJ016 | 5 |
VPAR223926 ncbi | Vibrio parahaemolyticus RIMD 2210633 | 5 |
VFIS312309 ncbi | Vibrio fischeri ES114 | 5 |
VEIS391735 ncbi | Verminephrobacter eiseniae EF01-2 | 4 |
VCHO345073 ncbi | Vibrio cholerae O395 | 5 |
VCHO ncbi | Vibrio cholerae O1 biovar El Tor str. N16961 | 5 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 5 |
TTEN273068 ncbi | Thermoanaerobacter tengcongensis MB4 | 4 |
TPSE340099 ncbi | Thermoanaerobacter pseudethanolicus ATCC 33223 | 4 |
TDEN292415 ncbi | Thiobacillus denitrificans ATCC 25259 | 4 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 4 |
SSP94122 ncbi | Shewanella sp. ANA-3 | 5 |
SSON300269 ncbi | Shigella sonnei Ss046 | 5 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 5 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 4 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 5 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 5 |
SMEL266834 ncbi | Sinorhizobium meliloti 1021 | 4 |
SMED366394 ncbi | Sinorhizobium medicae WSM419 | 4 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 5 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 5 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 5 |
SGOR29390 | Streptococcus gordonii Challis | 4 |
SGLO343509 ncbi | Sodalis glossinidius morsitans | 4 |
SFUM335543 ncbi | Syntrophobacter fumaroxidans MPOB | 5 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 5 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 5 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 4 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 4 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 4 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 4 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 4 |
SDYS300267 ncbi | Shigella dysenteriae Sd197 | 4 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 5 |
SDEG203122 ncbi | Saccharophagus degradans 2-40 | 5 |
SBOY300268 ncbi | Shigella boydii Sb227 | 5 |
SBAL402882 ncbi | Shewanella baltica OS185 | 5 |
SBAL399599 ncbi | Shewanella baltica OS195 | 5 |
SALA317655 ncbi | Sphingopyxis alaskensis RB2256 | 4 |
SACI56780 ncbi | Syntrophus aciditrophicus SB | 5 |
RSPH349102 ncbi | Rhodobacter sphaeroides ATCC 17025 | 4 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 5 |
RRUB269796 ncbi | Rhodospirillum rubrum ATCC 11170 | 4 |
RPOM246200 ncbi | Ruegeria pomeroyi DSS-3 | 4 |
RPAL316058 ncbi | Rhodopseudomonas palustris HaA2 | 4 |
RPAL316057 ncbi | Rhodopseudomonas palustris BisB5 | 4 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 4 |
RPAL316055 ncbi | Rhodopseudomonas palustris BisA53 | 4 |
RPAL258594 ncbi | Rhodopseudomonas palustris CGA009 | 4 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 5 |
RLEG216596 ncbi | Rhizobium leguminosarum bv. viciae 3841 | 4 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 4 |
REUT381666 ncbi | Ralstonia eutropha H16 | 5 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 5 |
RETL347834 ncbi | Rhizobium etli CFN 42 | 4 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 5 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 5 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 5 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 4 |
PSP296591 ncbi | Polaromonas sp. JS666 | 4 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 5 |
PPUT351746 ncbi | Pseudomonas putida F1 | 5 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 5 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 5 |
PPEN278197 ncbi | Pediococcus pentosaceus ATCC 25745 | 4 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 4 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 5 |
PLUT319225 ncbi | Chlorobium luteolum DSM 273 | 4 |
PLUM243265 ncbi | Photorhabdus luminescens laumondii TTO1 | 4 |
PING357804 ncbi | Psychromonas ingrahamii 37 | 5 |
PHAL326442 ncbi | Pseudoalteromonas haloplanktis TAC125 | 5 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 5 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 5 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 5 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 4 |
PCAR338963 ncbi | Pelobacter carbinolicus DSM 2380 | 4 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 5 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 5 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 5 |
OIHE221109 ncbi | Oceanobacillus iheyensis HTE831 | 4 |
OCAR504832 ncbi | Oligotropha carboxidovorans OM5 | 4 |
OANT439375 ncbi | Ochrobactrum anthropi ATCC 49188 | 4 |
NWIN323098 ncbi | Nitrobacter winogradskyi Nb-255 | 4 |
NOCE323261 ncbi | Nitrosococcus oceani ATCC 19707 | 4 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 4 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 4 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 4 |
NHAM323097 ncbi | Nitrobacter hamburgensis X14 | 4 |
NEUT335283 ncbi | Nitrosomonas eutropha C91 | 5 |
NEUR228410 ncbi | Nitrosomonas europaea ATCC 19718 | 5 |
MXAN246197 ncbi | Myxococcus xanthus DK 1622 | 4 |
MTHE264732 ncbi | Moorella thermoacetica ATCC 39073 | 4 |
MSP409 | Methylobacterium sp. | 4 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 4 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 4 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 5 |
MMAG342108 ncbi | Magnetospirillum magneticum AMB-1 | 4 |
MLOT266835 ncbi | Mesorhizobium loti MAFF303099 | 4 |
MEXT419610 ncbi | Methylobacterium extorquens PA1 | 4 |
MAQU351348 ncbi | Marinobacter aquaeolei VT8 | 4 |
LWEL386043 ncbi | Listeria welshimeri serovar 6b str. SLCC5334 | 4 |
LPLA220668 ncbi | Lactobacillus plantarum WCFS1 | 4 |
LMON265669 ncbi | Listeria monocytogenes 4b F2365 | 4 |
LMON169963 ncbi | Listeria monocytogenes EGD-e | 4 |
LINT267671 ncbi | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 4 |
LINT189518 ncbi | Leptospira interrogans serovar Lai str. 56601 | 4 |
LINN272626 ncbi | Listeria innocua Clip11262 | 4 |
LCHO395495 ncbi | Leptothrix cholodnii SP-6 | 5 |
LBOR355277 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 4 |
LBOR355276 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 4 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 5 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 5 |
ILOI283942 ncbi | Idiomarina loihiensis L2TR | 5 |
HHAL349124 ncbi | Halorhodospira halophila SL1 | 4 |
HCHE349521 ncbi | Hahella chejuensis KCTC 2396 | 5 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 5 |
GURA351605 ncbi | Geobacter uraniireducens Rf4 | 4 |
GTHE420246 ncbi | Geobacillus thermodenitrificans NG80-2 | 5 |
GSUL243231 ncbi | Geobacter sulfurreducens PCA | 4 |
GMET269799 ncbi | Geobacter metallireducens GS-15 | 4 |
GKAU235909 ncbi | Geobacillus kaustophilus HTA426 | 5 |
FNUC190304 ncbi | Fusobacterium nucleatum nucleatum ATCC 25586 | 4 |
ESP42895 | Enterobacter sp. | 4 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 5 |
EFAE226185 ncbi | Enterococcus faecalis V583 | 4 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 5 |
ECOL83334 | Escherichia coli O157:H7 | 5 |
ECOL585397 ncbi | Escherichia coli ED1a | 5 |
ECOL585057 ncbi | Escherichia coli IAI39 | 5 |
ECOL585056 ncbi | Escherichia coli UMN026 | 5 |
ECOL585055 ncbi | Escherichia coli 55989 | 5 |
ECOL585035 ncbi | Escherichia coli S88 | 5 |
ECOL585034 ncbi | Escherichia coli IAI1 | 5 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 5 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 5 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 5 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 5 |
ECOL409438 ncbi | Escherichia coli SE11 | 5 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 5 |
ECOL364106 ncbi | Escherichia coli UTI89 | 5 |
ECOL362663 ncbi | Escherichia coli 536 | 5 |
ECOL331111 ncbi | Escherichia coli E24377A | 5 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 5 |
ECOL199310 ncbi | Escherichia coli CFT073 | 5 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 5 |
DSHI398580 ncbi | Dinoroseobacter shibae DFL 12 | 4 |
DOLE96561 ncbi | Desulfococcus oleovorans Hxd3 | 4 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 4 |
DARO159087 ncbi | Dechloromonas aromatica RCB | 5 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 5 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 4 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 4 |
CSP78 | Caulobacter sp. | 4 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 5 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 5 |
CPRO264201 ncbi | Candidatus Protochlamydia amoebophila UWE25 | 4 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 4 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 4 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 4 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 4 |
CPER195103 ncbi | Clostridium perfringens ATCC 13124 | 4 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 4 |
CJAP155077 | Cellvibrio japonicus | 4 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 4 |
CDIF272563 ncbi | Clostridium difficile 630 | 4 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 4 |
CBOT536232 ncbi | Clostridium botulinum A2 str. Kyoto | 4 |
CBOT515621 ncbi | Clostridium botulinum Ba4 str. 657 | 4 |
CBOT498213 ncbi | Clostridium botulinum B1 str. Okra | 4 |
CBOT441772 ncbi | Clostridium botulinum F str. Langeland | 4 |
CBOT441771 ncbi | Clostridium botulinum A str. Hall | 4 |
CBOT441770 ncbi | Clostridium botulinum A str. ATCC 19397 | 4 |
CBOT36826 | Clostridium botulinum A | 4 |
CBEI290402 ncbi | Clostridium beijerinckii NCIMB 8052 | 4 |
CACE272562 ncbi | Clostridium acetobutylicum ATCC 824 | 4 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 4 |
BWEI315730 ncbi | Bacillus weihenstephanensis KBAB4 | 4 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 5 |
BTHU412694 ncbi | Bacillus thuringiensis Al Hakam | 4 |
BTHU281309 ncbi | Bacillus thuringiensis serovar konkukian str. 97-27 | 4 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 5 |
BSUI470137 ncbi | Brucella suis ATCC 23445 | 4 |
BSUI204722 ncbi | Brucella suis 1330 | 4 |
BSUB ncbi | Bacillus subtilis subtilis 168 | 5 |
BSP376 | Bradyrhizobium sp. | 4 |
BSP36773 | Burkholderia sp. | 5 |
BPUM315750 ncbi | Bacillus pumilus SAFR-032 | 4 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 4 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 5 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 5 |
BPET94624 | Bordetella petrii | 5 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 4 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 5 |
BOVI236 | Brucella ovis | 4 |
BMEL359391 ncbi | Brucella melitensis biovar Abortus 2308 | 4 |
BMEL224914 ncbi | Brucella melitensis bv. 1 str. 16M | 4 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 5 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 5 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 5 |
BLIC279010 ncbi | Bacillus licheniformis ATCC 14580 | 4 |
BJAP224911 ncbi | Bradyrhizobium japonicum USDA 110 | 4 |
BHAL272558 ncbi | Bacillus halodurans C-125 | 4 |
BCLA66692 ncbi | Bacillus clausii KSM-K16 | 4 |
BCER572264 ncbi | Bacillus cereus 03BB102 | 4 |
BCER405917 | Bacillus cereus W | 4 |
BCER315749 ncbi | Bacillus cytotoxicus NVH 391-98 | 4 |
BCER288681 ncbi | Bacillus cereus E33L | 4 |
BCER226900 ncbi | Bacillus cereus ATCC 14579 | 4 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 5 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 5 |
BCAN483179 ncbi | Brucella canis ATCC 23365 | 4 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 5 |
BANT592021 ncbi | Bacillus anthracis A0248 | 4 |
BANT568206 ncbi | Bacillus anthracis CDC 684 | 4 |
BANT261594 ncbi | Bacillus anthracis Ames Ancestor | 4 |
BANT260799 ncbi | Bacillus anthracis Sterne | 4 |
BAMY326423 ncbi | Bacillus amyloliquefaciens FZB42 | 4 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 5 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 5 |
BABO262698 ncbi | Brucella abortus bv. 1 str. 9-941 | 4 |
ASP76114 ncbi | Aromatoleum aromaticum EbN1 | 5 |
ASP62928 ncbi | Azoarcus sp. BH72 | 5 |
ASP232721 ncbi | Acidovorax sp. JS42 | 4 |
ASAL382245 ncbi | Aeromonas salmonicida salmonicida A449 | 5 |
AMET293826 ncbi | Alkaliphilus metalliredigens QYMF | 4 |
AHYD196024 | Aeromonas hydrophila dhakensis | 5 |
AFER243159 ncbi | Acidithiobacillus ferrooxidans ATCC 23270 | 4 |
AEHR187272 ncbi | Alkalilimnicola ehrlichii MLHE-1 | 4 |
ADEH290397 ncbi | Anaeromyxobacter dehalogenans 2CP-C | 5 |
ACAU438753 ncbi | Azorhizobium caulinodans ORS 571 | 4 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 5 |
ABAU360910 ncbi | Bordetella avium 197N | 5 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 4 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Disease:Bubonic_plague | 0.0044573 | 6 | 6 |
Disease:Dysentery | 0.0044573 | 6 | 6 |
Disease:Gastroenteritis | 0.0071353 | 10 | 13 |
Disease:Pharyngitis | 0.0007187 | 8 | 8 |
Disease:bronchitis_and_pneumonitis | 0.0007187 | 8 | 8 |
Endospores:No | 3.492e-16 | 41 | 211 |
Endospores:Yes | 0.0005170 | 33 | 53 |
GC_Content_Range4:0-40 | 2.449e-17 | 40 | 213 |
GC_Content_Range4:40-60 | 8.278e-7 | 119 | 224 |
GC_Content_Range4:60-100 | 0.0000499 | 79 | 145 |
GC_Content_Range7:0-30 | 0.0018516 | 10 | 47 |
GC_Content_Range7:30-40 | 2.238e-13 | 30 | 166 |
GC_Content_Range7:50-60 | 2.865e-8 | 69 | 107 |
GC_Content_Range7:60-70 | 1.777e-6 | 78 | 134 |
Genome_Size_Range5:0-2 | 4.797e-27 | 11 | 155 |
Genome_Size_Range5:2-4 | 3.541e-7 | 53 | 197 |
Genome_Size_Range5:4-6 | 1.694e-36 | 144 | 184 |
Genome_Size_Range5:6-10 | 0.0005207 | 30 | 47 |
Genome_Size_Range9:0-1 | 0.0000886 | 2 | 27 |
Genome_Size_Range9:1-2 | 1.200e-21 | 9 | 128 |
Genome_Size_Range9:2-3 | 4.797e-11 | 19 | 120 |
Genome_Size_Range9:4-5 | 1.546e-14 | 73 | 96 |
Genome_Size_Range9:5-6 | 1.141e-16 | 71 | 88 |
Genome_Size_Range9:6-8 | 0.0000738 | 27 | 38 |
Gram_Stain:Gram_Neg | 2.681e-16 | 183 | 333 |
Gram_Stain:Gram_Pos | 2.448e-6 | 38 | 150 |
Habitat:Host-associated | 0.0020093 | 69 | 206 |
Habitat:Multiple | 0.0000188 | 95 | 178 |
Habitat:Specialized | 4.356e-6 | 7 | 53 |
Habitat:Terrestrial | 0.0036782 | 20 | 31 |
Motility:No | 6.542e-19 | 18 | 151 |
Motility:Yes | 6.006e-19 | 161 | 267 |
Optimal_temp.:25-30 | 0.0000109 | 17 | 19 |
Oxygen_Req:Anaerobic | 0.0000116 | 23 | 102 |
Oxygen_Req:Facultative | 9.296e-6 | 106 | 201 |
Shape:Coccus | 6.590e-9 | 11 | 82 |
Shape:Rod | 3.246e-24 | 199 | 347 |
Shape:Sphere | 0.0034221 | 2 | 19 |
Shape:Spiral | 0.0061522 | 7 | 34 |
Temp._range:Hyperthermophilic | 0.0000714 | 1 | 23 |
Temp._range:Mesophilic | 5.755e-6 | 213 | 473 |
Temp._range:Thermophilic | 0.0000865 | 4 | 35 |
Org ID | Org Name | # genes in group found in org |
WPIP955 | Wolbachia pipientis | 0 |
WPIP80849 | Wolbachia endosymbiont of Brugia malayi | 0 |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
UMET351160 ncbi | uncultured methanogenic archaeon RC-I | 0 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 0 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 0 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 0 |
TROS309801 ncbi | Thermomicrobium roseum DSM 5159 | 0 |
TPET390874 ncbi | Thermotoga petrophila RKU-1 | 1 |
TPEN368408 ncbi | Thermofilum pendens Hrk 5 | 0 |
TMAR243274 ncbi | Thermotoga maritima MSB8 | 1 |
TKOD69014 ncbi | Thermococcus kodakarensis KOD1 | 0 |
TFUS269800 ncbi | Thermobifida fusca YX | 1 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
STRO369723 ncbi | Salinispora tropica CNB-440 | 0 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
STHE322159 ncbi | Streptococcus thermophilus LMD-9 | 1 |
SSP387093 ncbi | Sulfurovum sp. NBC37-1 | 1 |
SSOL273057 ncbi | Sulfolobus solfataricus P2 | 0 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 0 |
SCO ncbi | Streptomyces coelicolor A3(2) | 1 |
SAVE227882 ncbi | Streptomyces avermitilis MA-4680 | 1 |
SAUR93062 ncbi | Staphylococcus aureus aureus COL | 1 |
SARE391037 ncbi | Salinispora arenicola CNS-205 | 0 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RTYP257363 ncbi | Rickettsia typhi Wilmington | 1 |
RSP357808 ncbi | Roseiflexus sp. RS-1 | 0 |
RSP101510 ncbi | Rhodococcus jostii RHA1 | 0 |
RSAL288705 ncbi | Renibacterium salmoninarum ATCC 33209 | 1 |
RRIC452659 ncbi | Rickettsia rickettsii Iowa | 1 |
RRIC392021 ncbi | Rickettsia rickettsii Sheila Smith | 1 |
RPRO272947 ncbi | Rickettsia prowazekii Madrid E | 1 |
RMAS416276 ncbi | Rickettsia massiliae MTU5 | 1 |
RFEL315456 ncbi | Rickettsia felis URRWXCal2 | 1 |
RCON272944 ncbi | Rickettsia conorii Malish 7 | 1 |
RCAS383372 ncbi | Roseiflexus castenholzii DSM 13941 | 1 |
RCAN293613 ncbi | Rickettsia canadensis McKiel | 1 |
RBEL391896 ncbi | Rickettsia bellii OSU 85-389 | 1 |
RBEL336407 ncbi | Rickettsia bellii RML369-C | 1 |
RALB246199 | Ruminococcus albus 8 | 0 |
RAKA293614 ncbi | Rickettsia akari Hartford | 1 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 0 |
PMOB403833 ncbi | Petrotoga mobilis SJ95 | 1 |
PISL384616 ncbi | Pyrobaculum islandicum DSM 4184 | 0 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PFUR186497 ncbi | Pyrococcus furiosus DSM 3638 | 0 |
PAST100379 | Onion yellows phytoplasma | 0 |
PARS340102 ncbi | Pyrobaculum arsenaticum DSM 13514 | 0 |
PAER178306 ncbi | Pyrobaculum aerophilum IM2 | 0 |
PABY272844 ncbi | Pyrococcus abyssi GE5 | 0 |
OTSU357244 ncbi | Orientia tsutsugamushi Boryong | 0 |
NSP387092 ncbi | Nitratiruptor sp. SB155-2 | 1 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 0 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
NFAR247156 ncbi | Nocardia farcinica IFM 10152 | 1 |
MVAN350058 ncbi | Mycobacterium vanbaalenii PYR-1 | 1 |
MTUB419947 ncbi | Mycobacterium tuberculosis H37Ra | 0 |
MTUB336982 ncbi | Mycobacterium tuberculosis F11 | 0 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 0 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 0 |
MTBRV ncbi | Mycobacterium tuberculosis H37Rv | 0 |
MTBCDC ncbi | Mycobacterium tuberculosis CDC1551 | 0 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 0 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 0 |
MSP189918 ncbi | Mycobacterium sp. KMS | 1 |
MSP164757 ncbi | Mycobacterium sp. JLS | 1 |
MSP164756 ncbi | Mycobacterium sp. MCS | 1 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 0 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 0 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 0 |
MMAZ192952 ncbi | Methanosarcina mazei Go1 | 0 |
MMAR444158 ncbi | Methanococcus maripaludis C6 | 0 |
MMAR426368 ncbi | Methanococcus maripaludis C7 | 0 |
MMAR402880 ncbi | Methanococcus maripaludis C5 | 0 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 0 |
MMAR267377 ncbi | Methanococcus maripaludis S2 | 0 |
MLEP272631 ncbi | Mycobacterium leprae TN | 0 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 0 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 0 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 0 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 0 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 0 |
MHUN323259 ncbi | Methanospirillum hungatei JF-1 | 0 |
MGIL350054 ncbi | Mycobacterium gilvum PYR-GCK | 1 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MFLO265311 ncbi | Mesoplasma florum L1 | 1 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 1 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 0 |
MBOV410289 ncbi | Mycobacterium bovis BCG str. Pasteur 1173P2 | 0 |
MBOV233413 ncbi | Mycobacterium bovis AF2122/97 | 0 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 0 |
MAVI243243 ncbi | Mycobacterium avium 104 | 0 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 0 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 0 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 0 |
MABS561007 ncbi | Mycobacterium abscessus ATCC 19977 | 0 |
LXYL281090 ncbi | Leifsonia xyli xyli CTCB07 | 1 |
LREU557436 ncbi | Lactobacillus reuteri DSM 20016 | 1 |
LMES203120 ncbi | Leuconostoc mesenteroides mesenteroides ATCC 8293 | 1 |
LBRE387344 ncbi | Lactobacillus brevis ATCC 367 | 1 |
KRAD266940 ncbi | Kineococcus radiotolerans SRS30216 | 0 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 0 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 0 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 0 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 0 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
FSP1855 | Frankia sp. EAN1pec | 0 |
FSP106370 ncbi | Frankia sp. CcI3 | 0 |
FALN326424 ncbi | Frankia alni ACN14a | 0 |
ERUM302409 ncbi | Ehrlichia ruminantium Gardel | 0 |
ERUM254945 ncbi | Ehrlichia ruminantium Welgevonden | 0 |
ECHA205920 ncbi | Ehrlichia chaffeensis Arkansas | 0 |
ECAN269484 ncbi | Ehrlichia canis Jake | 0 |
DSP255470 ncbi | Dehalococcoides sp. CBDB1 | 0 |
DSP216389 ncbi | Dehalococcoides sp. BAV1 | 0 |
DETH243164 ncbi | Dehalococcoides ethenogenes 195 | 0 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CPEL335992 ncbi | Candidatus Pelagibacter ubique HTCC1062 | 1 |
CMIC443906 ncbi | Clavibacter michiganensis michiganensis NCPPB 382 | 1 |
CMIC31964 ncbi | Clavibacter michiganensis sepedonicus | 1 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 0 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 1 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 0 |
CHOM360107 ncbi | Campylobacter hominis ATCC BAA-381 | 1 |
CGLU196627 ncbi | Corynebacterium glutamicum ATCC 13032 | 1 |
CEFF196164 ncbi | Corynebacterium efficiens YS-314 | 1 |
CDIP257309 ncbi | Corynebacterium diphtheriae NCTC 13129 | 0 |
CDES477974 ncbi | Candidatus Desulforudis audaxviator MP104C | 1 |
CBLO291272 ncbi | Candidatus Blochmannia pennsylvanicus BPEN | 1 |
CBLO203907 ncbi | Candidatus Blochmannia floridanus | 1 |
BXEN266265 ncbi | Burkholderia xenovorans LB400 | 1 |
BTUR314724 ncbi | Borrelia turicatae 91E135 | 1 |
BSP107806 ncbi | Buchnera aphidicola APS (Acyrthosiphon pisum) | 0 |
BLON206672 ncbi | Bifidobacterium longum NCC2705 | 1 |
BHER314723 ncbi | Borrelia hermsii DAH | 1 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 0 |
BAPH372461 ncbi | Buchnera aphidicola Cc (Cinara cedri) | 0 |
BAPH198804 ncbi | Buchnera aphidicola Sg (Schizaphis graminum) | 0 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 0 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
ASP1667 | Arthrobacter sp. | 1 |
APHA212042 ncbi | Anaplasma phagocytophilum HZ | 0 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
ANAE240017 | Actinomyces oris MG1 | 0 |
AMAR234826 ncbi | Anaplasma marginale St. Maries | 0 |
AFUL224325 ncbi | Archaeoglobus fulgidus DSM 4304 | 0 |
ACEL351607 ncbi | Acidothermus cellulolyticus 11B | 1 |
ABUT367737 ncbi | Arcobacter butzleri RM4018 | 1 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 0.0000222 | 8 | 92 |
Arrangment:Pairs | 0.0006905 | 15 | 112 |
Disease:None | 0.0065747 | 22 | 58 |
Endospores:No | 2.597e-12 | 87 | 211 |
GC_Content_Range4:40-60 | 0.0028682 | 42 | 224 |
GC_Content_Range7:0-30 | 3.671e-7 | 27 | 47 |
GC_Content_Range7:50-60 | 0.0006964 | 14 | 107 |
GC_Content_Range7:70-100 | 0.0008315 | 8 | 11 |
Genome_Size_Range5:0-2 | 7.842e-15 | 75 | 155 |
Genome_Size_Range5:4-6 | 3.041e-8 | 20 | 184 |
Genome_Size_Range9:0-1 | 1.463e-11 | 23 | 27 |
Genome_Size_Range9:1-2 | 2.082e-6 | 52 | 128 |
Genome_Size_Range9:3-4 | 0.0084074 | 11 | 77 |
Genome_Size_Range9:4-5 | 0.0000326 | 9 | 96 |
Genome_Size_Range9:5-6 | 0.0013932 | 11 | 88 |
Gram_Stain:Gram_Neg | 2.907e-12 | 46 | 333 |
Habitat:Multiple | 0.0001478 | 27 | 178 |
Habitat:Specialized | 8.407e-6 | 27 | 53 |
Habitat:Terrestrial | 0.0069566 | 2 | 31 |
Motility:No | 1.471e-6 | 59 | 151 |
Motility:Yes | 8.227e-7 | 41 | 267 |
Optimal_temp.:85 | 0.0035057 | 4 | 4 |
Oxygen_Req:Anaerobic | 0.0001205 | 40 | 102 |
Oxygen_Req:Facultative | 0.0000114 | 29 | 201 |
Pathogenic_in:Animal | 0.0005585 | 6 | 66 |
Pathogenic_in:Human | 0.0000372 | 33 | 213 |
Pathogenic_in:No | 0.0013238 | 70 | 226 |
Shape:Irregular_coccus | 1.980e-11 | 17 | 17 |
Shape:Rod | 1.946e-7 | 59 | 347 |
Shape:Sphere | 5.535e-6 | 14 | 19 |
Temp._range:Hyperthermophilic | 3.189e-9 | 19 | 23 |
Temp._range:Mesophilic | 1.275e-8 | 92 | 473 |
Temp._range:Thermophilic | 0.0008924 | 17 | 35 |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) | 195 | 164 | 0.6004 |
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation) | 149 | 136 | 0.5806 |
GLYCOCAT-PWY (glycogen degradation I) | 246 | 177 | 0.5185 |
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate)) | 300 | 199 | 0.5083 |
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis) | 218 | 159 | 0.4856 |
PWY-1269 (CMP-KDO biosynthesis I) | 325 | 205 | 0.4815 |
PWY-5669 (phosphatidylethanolamine biosynthesis I) | 416 | 237 | 0.4772 |
PWY-5148 (acyl-CoA hydrolysis) | 227 | 161 | 0.4701 |
PWY-5918 (heme biosynthesis I) | 272 | 181 | 0.4680 |
TYRFUMCAT-PWY (tyrosine degradation I) | 184 | 139 | 0.4629 |
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis) | 300 | 192 | 0.4624 |
GLUTAMINDEG-PWY (glutamine degradation I) | 191 | 142 | 0.4592 |
GALACTARDEG-PWY (D-galactarate degradation I) | 151 | 121 | 0.4573 |
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I) | 225 | 158 | 0.4561 |
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I) | 286 | 185 | 0.4549 |
GLUCARDEG-PWY (D-glucarate degradation I) | 152 | 121 | 0.4532 |
PWY-6196 (serine racemization) | 102 | 92 | 0.4485 |
PWY-561 (superpathway of glyoxylate cycle) | 162 | 125 | 0.4434 |
GLYOXYLATE-BYPASS (glyoxylate cycle) | 169 | 128 | 0.4387 |
NAGLIPASYN-PWY (lipid IVA biosynthesis) | 348 | 207 | 0.4363 |
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I) | 208 | 147 | 0.4360 |
AST-PWY (arginine degradation II (AST pathway)) | 120 | 101 | 0.4351 |
PWY-4041 (γ-glutamyl cycle) | 279 | 179 | 0.4350 |
LIPA-CORESYN-PWY (Lipid A-core biosynthesis) | 176 | 131 | 0.4345 |
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation) | 135 | 109 | 0.4318 |
PWY-5028 (histidine degradation II) | 130 | 106 | 0.4299 |
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis) | 365 | 212 | 0.4273 |
PWY-5386 (methylglyoxal degradation I) | 305 | 188 | 0.4228 |
LIPASYN-PWY (phospholipases) | 212 | 147 | 0.4228 |
ECASYN-PWY (enterobacterial common antigen biosynthesis) | 191 | 136 | 0.4167 |
VALDEG-PWY (valine degradation I) | 290 | 180 | 0.4111 |
PWY-5084 (2-ketoglutarate dehydrogenase complex) | 326 | 194 | 0.4069 |
PWY-5194 (siroheme biosynthesis) | 312 | 188 | 0.4042 |
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic)) | 183 | 130 | 0.4019 |
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I) | 422 | 228 | 0.4009 |
EG11682 | EG11681 | EG11680 | EG10898 | |
EG11864 | 0.999916 | 0.999318 | 0.999595 | 0.999527 |
EG11682 | 0.99977 | 0.999865 | 0.999801 | |
EG11681 | 0.999735 | 0.999835 | ||
EG11680 | 0.999952 | |||
EG10898 |
EG11864 | EG11682 | EG11681 | EG11680 | EG10898 | |
EG11864 | 0.0f0 | - | - | - | - |
EG11682 | - | 0.0f0 | - | - | - |
EG11681 | - | - | 0.0f0 | - | - |
EG11680 | - | - | - | 0.0f0 | - |
EG10898 | - | - | - | - | 0.0f0 |