CANDIDATE ID: 201

CANDIDATE ID: 201

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9954740e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7424 (ftsB) (b2748)
   Products of gene:
     - G7424-MONOMER (essential cell division protein FtsB)

- G7423 (ispD) (b2747)
   Products of gene:
     - G7423-MONOMER (4-diphosphocytidyl-2C-methyl-D-erythritol synthetase monomer)
     - CPLX0-234 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase)
       Reactions:
        2-C-methyl-D-erythritol-4-phosphate + CTP + H+  =  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol + diphosphate
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG12111 (nlpD) (b2742)
   Products of gene:
     - EG12111-MONOMER (NlpD putative outer membrane lipoprotein)

- EG11816 (ispF) (b2746)
   Products of gene:
     - EG11816-MONOMER (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase monomer)
     - CPLX0-721 (2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase)
       Reactions:
        2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol  ->  CMP + 2-C-methyl-D-erythritol-2,4-cyclodiphosphate
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG10810 (pyrG) (b2780)
   Products of gene:
     - CTPSYN-MONOMER (PyrG)
     - CTPSYN-CPLX (CTP synthetase)
       Reactions:
        ATP + UTP + L-glutamine + H2O  ->  ADP + phosphate + CTP + L-glutamate + 3 H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)
         PWY-5687 (pyrimidine ribonucleotides interconversion)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 262
Effective number of orgs (counting one per cluster within 468 clusters): 187

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP84588 ncbi Synechococcus sp. WH 81024
SSP64471 ncbi Synechococcus sp. CC93114
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 424
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PMAR74547 ncbi Prochlorococcus marinus MIT 93134
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1304
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
LCHO395495 ncbi Leptothrix cholodnii SP-65
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1974
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5504
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DRED349161 ncbi Desulfotomaculum reducens MI-14
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSP78 Caulobacter sp.4
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CAULO ncbi Caulobacter crescentus CB154
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.5
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BCIC186490 Candidatus Baumannia cicadellinicola4
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5834
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)4
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACEL351607 ncbi Acidothermus cellulolyticus 11B4
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  G7424   G7423   EG12111   EG11816   EG10810   
ZMOB264203 ZMO1128ZMO0984ZMO1128ZMO0462
YPSE349747 YPSIP31758_3300YPSIP31758_3299YPSIP31758_3294YPSIP31758_3298YPSIP31758_3317
YPSE273123 YPTB0769YPTB0770YPTB0775YPTB0771YPTB0754
YPES386656 YPDSF_2998YPDSF_2999YPDSF_3004YPDSF_3000YPDSF_2982
YPES377628 YPN_0731YPN_0732YPN_0737YPN_0733YPN_0715
YPES360102 YPA_2781YPA_2782YPA_2787YPA_2783YPA_2875
YPES349746 YPANGOLA_A0965YPANGOLA_A0964YPANGOLA_A0959YPANGOLA_A0963YPANGOLA_A0980
YPES214092 YPO3362YPO3361YPO3356YPO3360YPO3377
YPES187410 Y0827Y0828Y0833Y0829Y0813
YENT393305 YE0768YE0769YE0774YE0770YE0746
XORY360094 XOOORF_1706XOOORF_1707XOOORF_1714XOOORF_1708XOOORF_1702
XORY342109 XOO2813XOO2812XOO2805XOO2811XOO2817
XORY291331 XOO2962XOO2961XOO2953XOO2960XOO2967
XFAS405440 XFASM12_0617XFASM12_0618XFASM12_1995XFASM12_0619XFASM12_0614
XFAS183190 PD_0544PD_0545PD_1820PD_0546PD_0541
XFAS160492 XF1292XF1293XF0855XF1294XF1288
XCAM487884 XCC-B100_2558XCC-B100_2557XCC-B100_2550XCC-B100_2556XCC-B100_2562
XCAM316273 XCAORF_1937XCAORF_1938XCAORF_1945XCAORF_1939XCAORF_1933
XCAM314565 XC_2530XC_2529XC_2522XC_2528XC_2534
XCAM190485 XCC1701XCC1702XCC1709XCC1703XCC1697
XAXO190486 XAC1720XAC1721XAC1728XAC1722XAC1716
XAUT78245 XAUT_4402XAUT_4412XAUT_4402XAUT_4200
VVUL216895 VV1_1581VV1_1582VV1_1587VV1_1583VV1_1578
VVUL196600 VV2817VV2816VV2810VV2814VV2819
VPAR223926 VP2560VP2559VP2554VP2558VP2562
VFIS312309 VF2074VF2073VF2068VF2072VF2076
VEIS391735 VEIS_2649VEIS_4360VEIS_0088VEIS_4361VEIS_2653
VCHO345073 VC0395_A0055VC0395_A0056VC0395_A0061VC0395_A0057VC0395_A2026
VCHO VC0527VC0528VC0533VC0529VC2448
TTEN273068 TTE2322TTE2691TTE2320TTE2609
TSP1755 TETH514_0839TETH514_1048TETH514_0841TETH514_2304
TPSE340099 TETH39_0346TETH39_0061TETH39_0348TETH39_0147
TELO197221 TLR0605TLR2154TLR2035TLL0768
TDEN292415 TBD_0622TBD_1003TBD_0837TBD_1004TBD_0619
SWOL335541 SWOL_2361SWOL_2406SWOL_2360SWOL_2418
STYP99287 STM2931STM2930STM2925STM2929STM2953
STHE292459 STH3123STH68STH3122STH40
SSP94122 SHEWANA3_1117SHEWANA3_1118SHEWANA3_1123SHEWANA3_1119SHEWANA3_1115
SSP84588 SYNW1849OR2911SYNW1214OR3392SYNW1610OR3091SYNW2428OR1041
SSP64471 GSYN2274GSYN1429GSYN0826GSYN3027
SSP321332 CYB_2706CYB_1820CYB_0783CYB_1478
SSP321327 CYA_1505CYA_1895CYA_0267CYA_1479
SSP1148 SLR0951SLR0993SLR1542SLL1443
SSON300269 SSO_2896SSO_2895SSO_2890SSO_2894SSO_2937
SSED425104 SSED_1291SSED_1292SSED_1297SSED_1293SSED_1289
SPRO399741 SPRO_0825SPRO_0826SPRO_0831SPRO_0827SPRO_0794
SPEA398579 SPEA_1186SPEA_1187SPEA_1192SPEA_1188SPEA_1184
SONE211586 SO_3439SO_3438SO_3433SO_3437SO_3441
SMEL266834 SMC01040SMC02060SMC01040SMC01025
SMED366394 SMED_1087SMED_1171SMED_1087SMED_1069
SLOI323850 SHEW_1206SHEW_1207SHEW_1212SHEW_1208SHEW_1204
SHIGELLA S2964YGBPNLPDYGBBPYRG
SHAL458817 SHAL_1223SHAL_1224SHAL_1229SHAL_1225SHAL_1221
SGLO343509 SG0525SG0526SG0530SG0527SG0512
SFLE373384 SFV_2750SFV_2751SFV_2756SFV_2752SFV_2675
SFLE198214 AAN44260.1AAN44259.1AAN44254.1AAN44258.1AAN44283.1
SENT454169 SEHA_C3121SEHA_C3120SEHA_C3114SEHA_C3119SEHA_C3150
SENT321314 SCH_2863SCH_2862SCH_2857SCH_2861SCH_2887
SENT295319 SPA2787SPA2786SPA2781SPA2785SPA2810
SENT220341 STY3056STY3055STY3050STY3054STY3082
SENT209261 T2832T2831T2826T2830T2854
SELO269084 SYC0848_DSYC0925_CSYC0380_DSYC2140_D
SDYS300267 SDY_2947SDY_2946SDY_2941SDY_2945SDY_2997
SDEN318161 SDEN_1197SDEN_1198SDEN_1203SDEN_1199SDEN_1195
SDEG203122 SDE_1246SDE_1247SDE_1252SDE_1248SDE_1243
SBOY300268 SBO_2772SBO_2773SBO_2778SBO_2774SBO_2661
SBAL402882 SHEW185_3135SHEW185_3134SHEW185_3129SHEW185_3133SHEW185_3137
SBAL399599 SBAL195_3278SBAL195_3277SBAL195_3272SBAL195_3276SBAL195_3280
SACI56780 SYN_01401SYN_00999SYN_01400SYN_02922
RSOL267608 RSC1130RSC1643RSC1206RSC1644RSC1126
RRUB269796 RRU_A1674RRU_A1767RRU_A1674RRU_A1887
RPAL316058 RPB_2885RPB_2736RPB_2885RPB_2790
RPAL316057 RPD_2587RPD_2781RPD_2587RPD_2824
RPAL316056 RPC_2575RPC_2522RPC_2575RPC_2473
RPAL316055 RPE_2755RPE_2706RPE_2755RPE_2595
RPAL258594 RPA2590RPA2837RPA2590RPA2886
RMET266264 RMET_1056RMET_1954RMET_2116RMET_1953RMET_1052
RLEG216596 RL2254RL2052RL2254RL2511
RFER338969 RFER_2651RFER_1332RFER_2780RFER_1332RFER_2648
REUT381666 H16_A1189H16_A1456H16_A2374H16_A1457H16_A1185
REUT264198 REUT_A1092REUT_A1361REUT_A2096REUT_A1362REUT_A1088
RETL347834 RHE_CH01945RHE_CH01829RHE_CH01945RHE_CH02184
PTHE370438 PTH_0289PTH_2862PTH_0290PTH_2843
PSYR223283 PSPTO_1555PSPTO_1556PSPTO_1564PSPTO_1560PSPTO_1552
PSYR205918 PSYR_1364PSYR_1365PSYR_1373PSYR_1369PSYR_1361
PSTU379731 PST_1558PST_1559PST_1571PST_1566PST_1555
PSP56811 PSYCPRWF_1663PSYCPRWF_1662PSYCPRWF_1756PSYCPRWF_0962PSYCPRWF_1670
PSP312153 PNUC_0948PNUC_0930PNUC_1297PNUC_0931PNUC_0945
PSP296591 BPRO_3185BPRO_2716BPRO_3059BPRO_2715BPRO_3181
PPUT76869 PPUTGB1_1167PPUTGB1_1168PPUTGB1_1176PPUTGB1_1172PPUTGB1_1164
PPUT351746 PPUT_4164PPUT_4163PPUT_4155PPUT_4159PPUT_4167
PPUT160488 PP_1613PP_1614PP_1622PP_1618PP_1610
PPRO298386 PBPRA3078PBPRA3077PBPRA3072PBPRA3076PBPRA3080
PNAP365044 PNAP_1182PNAP_2549PNAP_2577PNAP_2548PNAP_1185
PMUL272843 PM1607PM1608PM1614PM1609PM1872
PMEN399739 PMEN_3032PMEN_3031PMEN_3021PMEN_3026PMEN_3035
PMAR74547 PMT1330PMT0751PMT0356PMT2219
PLUM243265 PLU0712PLU0713PLU0718PLU0714PLU0912
PING357804 PING_0671PING_0672PING_0676PING_0673PING_0668
PHAL326442 PSHAA0683PSHAA0684PSHAA0690PSHAA0685PSHAA0741
PFLU220664 PFL_1197PFL_1198PFL_1206PFL_1202PFL_1194
PFLU216595 PFLU1292PFLU1293PFLU1301PFLU1297PFLU1289
PFLU205922 PFL_1122PFL_1123PFL_1131PFL_1127PFL_1119
PENT384676 PSEEN4199PSEEN4198PSEEN4190PSEEN4194PSEEN4202
PCRY335284 PCRYO_1869PCRYO_1868PCRYO_0661PCRYO_1149PCRYO_1875
PCAR338963 PCAR_0103PCAR_1429PCAR_0102PCAR_1945
PATL342610 PATL_3856PATL_3857PATL_3863PATL_3858PATL_3265
PARC259536 PSYC_1635PSYC_1634PSYC_0690PSYC_1243PSYC_1641
PAER208964 PA3634PA3633PA3623PA3627PA3637
PAER208963 PA14_17330PA14_17340PA14_17470PA14_17420PA14_17290
OCAR504832 OCAR_6093OCAR_6260OCAR_6093OCAR_6300
OANT439375 OANT_2069OANT_2339OANT_2069OANT_2054
NWIN323098 NWI_1442NWI_1772NWI_1442NWI_1833
NSP103690 ALL5167ALR3353ALR3883ALR5000
NOCE323261 NOC_0853NOC_0854NOC_0792NOC_0855NOC_0850
NMUL323848 NMUL_A1229NMUL_A2127NMUL_A0497NMUL_A2126NMUL_A1227
NMEN374833 NMCC_1199NMCC_1418NMCC_1394NMCC_1417NMCC_1456
NMEN272831 NMC1221NMC1442NMC1418NMC1441NMC1471
NMEN122587 NMA1496NMA1713NMA1692NMA1712NMA1742
NMEN122586 NMB_1286NMB_1513NMB_1483NMB_1512NMB_1554
NHAM323097 NHAM_1834NHAM_1795NHAM_1834NHAM_1738
NGON242231 NGO0616NGO0972NGO1056NGO0971NGO1212
NEUT335283 NEUT_2481NEUT_1525NEUT_2322NEUT_1300NEUT_2483
NEUR228410 NE1043NE1412NE0948NE1402NE1045
NARO279238 SARO_1925SARO_0849SARO_1925SARO_2017
MTHE264732 MOTH_2487MOTH_2401MOTH_2486MOTH_2409
MSUC221988 MS2276MS2275MS2268MS2274MS0255
MSP409 M446_5927M446_6574M446_5927M446_5402
MSP400668 MMWYL1_1300MMWYL1_1301MMWYL1_1307MMWYL1_1302MMWYL1_1298
MSP266779 MESO_1621MESO_1800MESO_1621MESO_1634
MPET420662 MPE_A2848MPE_A1570MPE_A1254MPE_A1571MPE_B0218
MMAR394221 MMAR10_1439MMAR10_1901MMAR10_1439MMAR10_1408
MMAG342108 AMB2363AMB2518AMB2363AMB1821
MLOT266835 MLL0395MLL1077MLL0395MLL0606
MFLA265072 MFLA_1908MFLA_1116MFLA_1826MFLA_1117MFLA_1911
MEXT419610 MEXT_2817MEXT_4231MEXT_2817MEXT_4661
MCAP243233 MCA_2516MCA_2517MCA_2518MCA_2513
MAQU351348 MAQU_0922MAQU_0923MAQU_0929MAQU_0924MAQU_0919
MAER449447 MAE_45830MAE_24900MAE_31930MAE_14480
LINT267671 LIC_12617LIC_12622LIC_10610LIC_11540
LINT189518 LA1048LA1043LA3590LA2409
LCHO395495 LCHO_1173LCHO_2295LCHO_1920LCHO_2293LCHO_1176
LBOR355277 LBJ_0280LBJ_0285LBJ_0323LBJ_1451
LBOR355276 LBL_2796LBL_2791LBL_2753LBL_1675
KPNE272620 GKPORF_B2441GKPORF_B2440GKPORF_B2435GKPORF_B2439GKPORF_B2458
JSP375286 MMA_1271MMA_1409MMA_2135MMA_1410MMA_1269
ILOI283942 IL0753IL0752IL0746IL0751IL0773
HSOM228400 HSM_0506HSM_0505HSM_0499HSM_0503HSM_1668
HSOM205914 HS_1495HS_1496HS_1502HS_1498HS_0552
HMOD498761 HM1_1354HM1_1080HM1_1354HM1_1068
HINF71421 HI_0673HI_0672HI_0706HI_0671HI_1077
HINF374930 CGSHIEE_08810CGSHIEE_08815CGSHIEE_08615CGSHIEE_08820CGSHIEE_06690
HINF281310 NTHI0795NTHI0794NTHI0830NTHI0793NTHI1238
HHAL349124 HHAL_1436HHAL_1435HHAL_1428HHAL_1434HHAL_1439
HDUC233412 HD_1330HD_1329HD_0755HD_1328HD_0373
HCHE349521 HCH_01868HCH_01869HCH_01876HCH_01870HCH_01865
HARS204773 HEAR2187HEAR1912HEAR1256HEAR1911HEAR2189
GVIO251221 GLR2791GLL1142GLR3547GLR1524
FTUL458234 FTA_1610FTA_1609FTA_0882FTA_1386
FTUL418136 FTW_1531FTW_1530FTW_1161FTW_1708
FTUL401614 FTN_0622FTN_0623FTN_1110FTN_0270
FTUL393115 FTF0710FTF0711FTF1128FTF0374C
FTUL393011 FTH_1476FTH_1475FTH_0823FTH_1283
FTUL351581 FTL_1526FTL_1525FTL_0833FTL_1311
FRANT FTSBISPDISPFPYRG
FPHI484022 FPHI_0220FPHI_0219FPHI_1496FPHI_0550
ESP42895 ENT638_3219ENT638_3218ENT638_3213ENT638_3217ENT638_3234
EFER585054 EFER_0320EFER_0321EFER_0327EFER_0322EFER_0284
ECOO157 Z4056YGBPNLPDYGBBPYRG
ECOL83334 ECS3602ECS3601ECS3596ECS3600ECS3640
ECOL585397 ECED1_3204ECED1_3203ECED1_3197ECED1_3202ECED1_3233
ECOL585057 ECIAI39_2937ECIAI39_2936ECIAI39_2930ECIAI39_2935ECIAI39_3199
ECOL585056 ECUMN_3072ECUMN_3071ECUMN_3065ECUMN_3070ECUMN_3111
ECOL585055 EC55989_3020EC55989_3019EC55989_3013EC55989_3018EC55989_3055
ECOL585035 ECS88_3018ECS88_3017ECS88_3011ECS88_3016ECS88_3048
ECOL585034 ECIAI1_2849ECIAI1_2848ECIAI1_2842ECIAI1_2847ECIAI1_2888
ECOL481805 ECOLC_0964ECOLC_0965ECOLC_0970ECOLC_0966ECOLC_0932
ECOL469008 ECBD_0976ECBD_0977ECBD_0982ECBD_0978ECBD_0949
ECOL439855 ECSMS35_2873ECSMS35_2872ECSMS35_2867ECSMS35_2871ECSMS35_2918
ECOL413997 ECB_02598ECB_02597ECB_02592ECB_02596ECB_02625
ECOL409438 ECSE_3000ECSE_2999ECSE_2994ECSE_2998ECSE_3038
ECOL405955 APECO1_3775APECO1_3776APECO1_3781APECO1_3777APECO1_3750
ECOL364106 UTI89_C3119UTI89_C3118UTI89_C3112UTI89_C3117UTI89_C3149
ECOL362663 ECP_2730ECP_2729ECP_2723ECP_2728ECP_2761
ECOL331111 ECE24377A_3049ECE24377A_3048ECE24377A_3043ECE24377A_3047ECE24377A_3084
ECOL316407 ECK2743:JW2718:B2748ECK2742:JW2717:B2747ECK2737:JW2712:B2742ECK2741:JW2716:B2746ECK2774:JW2751:B2780
ECOL199310 C3315C3314C3308C3313C3345
ECAR218491 ECA3536ECA3535ECA3531ECA3534ECA3567
DRED349161 DRED_0187DRED_3173DRED_0188DRED_3181
DHAF138119 DSY0443DSY4936DSY0444DSY4944
DARO159087 DARO_2363DARO_1973DARO_2522DARO_1974DARO_2366
CVIO243365 CV_3460CV_1258CV_3681CV_1259CV_3457
CSP78 CAUL_2603CAUL_3112CAUL_2603CAUL_2765
CSAL290398 CSAL_2639CSAL_2638CSAL_2632CSAL_2637CSAL_0617
CPSY167879 CPS_1071CPS_1072CPS_1078CPS_1073CPS_4108
CPER289380 CPR_2426CPR_2621CPR_2302CPR_2182
CPER195103 CPF_2739CPF_2938CPF_2616CPF_2472
CPER195102 CPE2429CPE2611CPE2316CPE2208
CJAP155077 CJA_2224CJA_2223CJA_2219CJA_2222CJA_2227
CHYD246194 CHY_2342CHY_2625CHY_2341CHY_0125
CDES477974 DAUD_0186DAUD_2172DAUD_0186DAUD_2180
CBOT536232 CLM_3975CLM_4099CLM_0110CLM_0175
CBOT515621 CLJ_B3816CLJ_B3936CLJ_B0100CLJ_B0170
CBOT508765 CLL_A0216CLL_A3558CLL_A0353CLL_A0476
CBOT441771 CLC_3453CLC_3585CLC_0114CLC_0180
CBOT441770 CLB_3564CLB_3687CLB_0102CLB_0168
CBOT36826 CBO3504CBO3606CBO0066CBO0132
CBLO291272 BPEN_170BPEN_171BPEN_173BPEN_172BPEN_161
CAULO CC1738CC1996CC1738CC1720
BVIE269482 BCEP1808_2185BCEP1808_1870BCEP1808_1748BCEP1808_1869BCEP1808_2188
BTRI382640 BT_0870BT_0846BT_0870BT_0854
BTHA271848 BTH_I1895BTH_I2089BTH_I2752BTH_I2090BTH_I1892
BSUI470137 BSUIS_A1169BSUIS_A0926BSUIS_A1169BSUIS_A1183
BSUI204722 BR_1120BR_0888BR_1120BR_1134
BSP376 BRADO3869BRADO4039BRADO3869BRADO4103
BSP36773 BCEP18194_A5412BCEP18194_A5254BCEP18194_A4460BCEP18194_A5253BCEP18194_A5415
BSP107806 BU421BU420BU418BU419BU416
BQUI283165 BQ04980BQ04790BQ04980BQ04860
BPUM315750 BPUM_0075BPUM_2040BPUM_0076BPUM_3360
BPSE320373 BURPS668_2576BURPS668_2358BURPS668_1511BURPS668_2357BURPS668_2579
BPSE272560 BPSL2269BPSL2099BPSL1381BPSL2098BPSL2272
BPET94624 BPET1803BPET1695BPET2547BPET1696BPET1800
BPER257313 BP2385BP0865BP1721BP0866BP2389
BPAR257311 BPP3251BPP3366BPP3055BPP3365BPP3255
BOVI236 GBOORF1120GBOORF0915GBOORF1120GBOORF1136
BMEL359391 BAB1_1143BAB1_0907BAB1_1143BAB1_1157
BMEL224914 BMEI0863BMEI1079BMEI0863BMEI0849
BMAL320389 BMA10247_1465BMA10247_1259BMA10247_0602BMA10247_1258BMA10247_1468
BMAL320388 BMASAVP1_A2192BMASAVP1_A1987BMASAVP1_A1320BMASAVP1_A1986BMASAVP1_A2195
BMAL243160 BMA_1688BMA_1490BMA_0803BMA_1489BMA_1691
BLIC279010 BL03265BL00648BL03266BL03966
BJAP224911 BLL4485BLL4743BLL4485BLL4805
BHEN283166 BH05820BH05630BH05820BH05700
BCIC186490 BCI_0211BCI_0175BCI_0210BCI_0222
BCEN331272 BCEN2424_2106BCEN2424_1943BCEN2424_1821BCEN2424_1942BCEN2424_2109
BCEN331271 BCEN_5971BCEN_6136BCEN_6258BCEN_6137BCEN_5968
BCAN483179 BCAN_A1139BCAN_A0902BCAN_A1139BCAN_A1153
BBRO257310 BB3702BB3817BB3018BB3816BB3706
BBAC360095 BARBAKC583_0540BARBAKC583_0521BARBAKC583_0540BARBAKC583_0530
BAPH198804 BUSG406BUSG405BUSG404BUSG399
BAMB398577 BAMMC406_2016BAMMC406_1858BAMMC406_1228BAMMC406_1857BAMMC406_2019
BAMB339670 BAMB_2143BAMB_1931BAMB_4030BAMB_1930BAMB_2146
BABO262698 BRUAB1_1126BRUAB1_0900BRUAB1_1126BRUAB1_1140
AVAR240292 AVA_2414AVA_3195AVA_1811AVA_2267
ASP76114 EBD109EBA6543EBA779EBA6542EBA6159
ASP62977 ACIAD2000ACIAD1999ACIAD1229ACIAD1996ACIAD2003
ASP62928 AZO2143AZO1682AZO1089AZO1683AZO2146
ASP232721 AJS_0996AJS_3156AJS_1162AJS_3155AJS_1000
ASAL382245 ASA_3474ASA_3473ASA_3467ASA_3472ASA_3476
APLE434271 APJL_0806APJL_0807APJL_1978APJL_0808APJL_0137
APLE416269 APL_0801APL_0802APL_1930APL_0803APL_0136
AMET293826 AMET_4506AMET_4761AMET_4505AMET_0183
AMAR329726 AM1_3984AM1_1508AM1_2915AM1_2914
AHYD196024 AHA_0822AHA_0823AHA_0829AHA_0824AHA_0820
AFER243159 AFE_2191AFE_2662AFE_2661AFE_2194
AEHR187272 MLG_1838MLG_1837MLG_1826MLG_1836MLG_1841
ADEH290397 ADEH_1272ADEH_0752ADEH_1272ADEH_4174
ACEL351607 ACEL_1533ACEL_0376ACEL_0081ACEL_1243
ACAU438753 AZC_3089AZC_1731AZC_3089AZC_3067
ABOR393595 ABO_1165ABO_1166ABO_1171ABO_1167ABO_1162
ABAU360910 BAV1167BAV1060BAV1979BAV1059BAV1165
AAVE397945 AAVE_1321AAVE_1581AAVE_1416AAVE_1582AAVE_1327


Organism features enriched in list (features available for 246 out of the 262 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00215502792
Arrangment:Pairs 0.003849859112
Arrangment:Singles 0.0024731136286
Disease:Bubonic_plague 0.005446666
Disease:Dysentery 0.005446666
Disease:Gastroenteritis 0.00178931113
Endospores:No 6.639e-1644211
GC_Content_Range4:0-40 4.759e-2335213
GC_Content_Range4:40-60 5.317e-10130224
GC_Content_Range4:60-100 0.000051881145
GC_Content_Range7:0-30 0.00273271147
GC_Content_Range7:30-40 3.512e-1924166
GC_Content_Range7:50-60 1.931e-1176107
GC_Content_Range7:60-70 1.620e-680134
Genome_Size_Range5:0-2 2.150e-2217155
Genome_Size_Range5:4-6 8.911e-16122184
Genome_Size_Range5:6-10 0.00036733147
Genome_Size_Range9:0-1 0.0003349327
Genome_Size_Range9:1-2 6.537e-1814128
Genome_Size_Range9:2-3 0.007201140120
Genome_Size_Range9:4-5 7.850e-76296
Genome_Size_Range9:5-6 6.419e-86088
Genome_Size_Range9:6-8 0.00003842838
Gram_Stain:Gram_Neg 2.987e-24199333
Gram_Stain:Gram_Pos 5.936e-2216150
Habitat:Multiple 0.003019589178
Habitat:Specialized 0.00565911453
Motility:No 7.846e-1131151
Motility:Yes 9.346e-9146267
Optimal_temp.:- 0.0033040123257
Optimal_temp.:25-30 1.404e-61819
Optimal_temp.:35-37 0.00001111313
Oxygen_Req:Anaerobic 8.855e-624102
Oxygen_Req:Facultative 0.0012193101201
Shape:Coccus 6.027e-71582
Shape:Rod 1.011e-13189347
Temp._range:Hyperthermophilic 0.0003696223
Temp._range:Psychrophilic 0.004958489



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 200
Effective number of orgs (counting one per cluster within 468 clusters): 148

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TSP28240 Thermotoga sp.1
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ951
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GFOR411154 ncbi Gramella forsetii KT08031
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
EFAE226185 ncbi Enterococcus faecalis V5831
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  G7424   G7423   EG12111   EG11816   EG10810   
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0171
TTHE262724 TT_C1815
TSP28240 TRQ2_1436
TPET390874 TPET_1390
TPEN368408
TPAL243276 TP_0512
TMAR243274 TM_1393
TLET416591
TKOD69014
TDEN326298 TMDEN_1487
TDEN243275 TDE_2292
TACI273075
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP387093 SUN_0522
SSOL273057
SSAP342451 SSP0758
SPYO370554 MGAS10750_SPY1665
SPYO370553 MGAS2096_SPY1633
SPYO370552 MGAS10270_SPY1678
SPYO370551 MGAS9429_SPY1613
SPYO319701 M28_SPY1599
SPYO293653
SPYO286636 M6_SPY1618
SPYO198466 SPYM3_1632
SPYO193567 SPS0234
SPYO186103 SPYM18_1959
SPYO160490 SPY1894
SPNE488221 SP70585_0556
SPNE487214 SPH_0605
SPNE487213 SPT_0533
SPNE171101 SPR0438
SPNE170187 SPN03130
SPNE1313 SPJ_0464
SMUT210007 SMU_97
SMAR399550
SHAE279808 SH0908
SEPI176280 SE_1725
SEPI176279 SERP1734
SCO SCO4233
SAVE227882 SAV3969
SAUR93062 SACOL2119
SAUR93061 SAOUHSC_02368
SAUR426430 NWMN_2031
SAUR418127 SAHV_2111
SAUR367830 SAUSA300_2081
SAUR359787 SAURJH1_2201
SAUR359786 SAURJH9_2163
SAUR282459 SAS2030
SAUR282458 SAR2215
SAUR273036 SAB2011C
SAUR196620 MW2051
SAUR158879 SA1929
SAUR158878 SAV2127
SAGA211110
SAGA208435
SAGA205921
SACI330779
RTYP257363
RSP357808 ROSERS_3115
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_2963
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PPEN278197
PMOB403833 PMOB_1218
PISL384616
PHOR70601
PFUR186497
PDIS435591 BDI_2574
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244
OIHE221109 OB3007
NPHA348780
NFAR247156 NFA4360
MVAN350058 MVAN_4129
MTUB419947 MRA_3621
MTUB336982 TBFG_13615
MTHE349307
MTHE187420
MTBRV RV3582C
MTBCDC MT3688
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_1762
MMAR426368 MMARC7_0141
MMAR402880 MMARC5_0701
MMAR368407
MMAR267377 MMP0893
MLAB410358
MKAN190192 MK0205
MJAN243232 MJ_1174
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289 BCG_3647C
MBOV233413 MB3613C
MBAR269797
MART243272
MAEO419665
MACE188937
MABS561007 MAB_0569
LSAK314315 LSA1629
LREU557436 LREU_0230
LPLA220668
LMES203120
LLAC272623
LLAC272622
LJOH257314
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967 LSEI_1098
LBRE387344
LACI272621
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0404
HPYL357544 HPAG1_0427
HPY HP1020
HMUK485914
HMAR272569
HHEP235279 HH_1582
HBUT415426
HACI382638 HAC_1124
GFOR411154 GFO_2218
FJOH376686
ERUM302409 ERGA_CDS_00950
ERUM254945 ERWE_CDS_00990
EFAE226185 EF_0042
DGEO319795 DGEO_0181
CTRA471473 CTLON_0718
CTRA471472 CTL0722
CSUL444179
CPRO264201 PC0327
CPNE182082 CPB0603
CPNE138677 CPJ0579
CPNE115713 CPN0579
CPNE115711 CP_0169
CMUR243161 TC_0747
CMET456442
CMAQ397948
CKOR374847
CFEL264202 CF0845
CDIP257309 DIP1973
CCAV227941 CCA_00162
CABO218497 CAB160
BXEN266265 BXE_B1663
BTUR314724
BLON206672 BL0324
BHER314723
BGAR290434
BBUR224326
BAPH372461
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042 APH_1276
APER272557
ANAE240017 ANA_1973
ALAI441768
AFUL224325
ABUT367737 ABU_0126


Organism features enriched in list (features available for 192 out of the 200 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 2.561e-61517
Arrangment:Singles 0.001953179286
Disease:Pharyngitis 0.000125388
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 4.059e-61111
Disease:Wide_range_of_infections 4.059e-61111
Disease:bronchitis_and_pneumonitis 0.000125388
Endospores:No 9.708e-22122211
Endospores:Yes 5.216e-6453
GC_Content_Range4:0-40 1.357e-17117213
GC_Content_Range4:40-60 5.462e-650224
GC_Content_Range4:60-100 8.412e-725145
GC_Content_Range7:0-30 0.00054192647
GC_Content_Range7:30-40 2.244e-1291166
GC_Content_Range7:50-60 1.160e-812107
GC_Content_Range7:60-70 8.038e-722134
Genome_Size_Range5:0-2 4.991e-26105155
Genome_Size_Range5:4-6 1.810e-2114184
Genome_Size_Range5:6-10 0.0007462647
Genome_Size_Range9:0-1 1.139e-62127
Genome_Size_Range9:1-2 3.796e-1884128
Genome_Size_Range9:2-3 0.000035258120
Genome_Size_Range9:3-4 3.786e-6977
Genome_Size_Range9:4-5 2.577e-81096
Genome_Size_Range9:5-6 4.741e-12488
Genome_Size_Range9:6-8 0.0001795338
Gram_Stain:Gram_Neg 5.775e-1960333
Gram_Stain:Gram_Pos 5.616e-774150
Habitat:Host-associated 1.921e-898206
Habitat:Multiple 1.767e-635178
Habitat:Specialized 0.00085492853
Habitat:Terrestrial 0.0000458131
Motility:No 3.730e-1183151
Motility:Yes 7.132e-1152267
Optimal_temp.:- 1.353e-756257
Optimal_temp.:30-35 0.005739167
Optimal_temp.:30-37 0.00008631418
Optimal_temp.:37 0.001183748106
Oxygen_Req:Aerobic 0.003681448185
Pathogenic_in:Human 0.003016884213
Pathogenic_in:Swine 0.003739755
Shape:Coccus 2.995e-145882
Shape:Irregular_coccus 2.561e-61517
Shape:Rod 1.515e-1964347
Shape:Sphere 3.929e-61619
Temp._range:Hyperthermophilic 6.651e-82023
Temp._range:Mesophilic 0.0082532146473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2461950.6090
PWY-4041 (γ-glutamyl cycle)2792090.5994
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392330.5904
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181760.5749
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951630.5679
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002130.5651
PWY-1269 (CMP-KDO biosynthesis I)3252200.5424
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482290.5412
PWY-5913 (TCA cycle variation IV)3012090.5363
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292190.5252
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491310.5209
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861990.5137
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912010.5124
PWY-5918 (heme biosynthesis I)2721920.5088
PWY-5386 (methylglyoxal degradation I)3052060.5056
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962020.5047
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251690.5035
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982410.4984
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901980.4957
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551820.4944
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222470.4836
TYRFUMCAT-PWY (tyrosine degradation I)1841450.4820
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831440.4786
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911460.4632
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911460.4632
PWY-5148 (acyl-CoA hydrolysis)2271630.4563
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96910.4560
AST-PWY (arginine degradation II (AST pathway))1201050.4497
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742250.4495
PWY0-862 (cis-dodecenoyl biosynthesis)3432130.4494
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761360.4477
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491700.4334
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491700.4334
PWY-5938 ((R)-acetoin biosynthesis I)3762230.4312
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112970.4225
PWY-5340 (sulfate activation for sulfonation)3852250.4222
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652170.4192
PWY-5028 (histidine degradation II)1301070.4187
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111950.4176
GLUCONSUPER-PWY (D-gluconate degradation)2291580.4161
PWY-6389 ((S)-acetoin biosynthesis)3682170.4116
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162340.4077



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7423   EG12111   EG11816   EG10810   
G74240.9997230.9994290.9996080.999692
G74230.999470.9999890.999418
EG121110.9994930.999307
EG118160.999345
EG10810



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PAIRWISE BLAST SCORES:

  G7424   G7423   EG12111   EG11816   EG10810   
G74240.0f0----
G7423-0.0f0---
EG12111--0.0f0--
EG11816---0.0f0-
EG10810----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- NONMEVIPP-PWY (methylerythritol phosphate pathway) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.400, average score: 0.646)
  Genes in pathway or complex:
             0.0494 0.0019 G6237 (dxs) DXS-MONOMER (Dxs)
             0.9885 0.9816 EG12715 (dxr) DXPREDISOM-MONOMER (Dxr)
             0.5689 0.2804 EG10370 (ispG) EG10370-MONOMER (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
             0.2941 0.0688 EG11081 (ispH) EG11081-MONOMER (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase)
   *in cand* 0.9997 0.9994 G7423 (ispD) G7423-MONOMER (4-diphosphocytidyl-2C-methyl-D-erythritol synthetase monomer)
             0.6012 0.0592 EG11294 (ispE) EG11294-MONOMER (IspE)
   *in cand* 0.9997 0.9993 EG11816 (ispF) EG11816-MONOMER (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase monomer)
             0.9073 0.8331 G7508 (idi) IPPISOM-MONOMER (isopentenyl diphosphate isomerase)
             0.9693 0.9384 EG11328 (fdx) OX-FERREDOXIN (oxidized ferredoxin)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 EG10810 (pyrG) CTPSYN-MONOMER (PyrG)
   *in cand* 0.9995 0.9993 EG12111 (nlpD) EG12111-MONOMER (NlpD putative outer membrane lipoprotein)
   *in cand* 0.9997 0.9994 G7424 (ftsB) G7424-MONOMER (essential cell division protein FtsB)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11816 G7423 G7424 (centered at G7423)
EG12111 (centered at EG12111)
EG10810 (centered at EG10810)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7424   G7423   EG12111   EG11816   EG10810   
188/623418/623282/623415/623416/623
AAEO224324:0:Tyes-257-0267
AAUR290340:2:Tyes---0740
AAVE397945:0:Tyes0258952596
ABAC204669:0:Tyes-1-03510
ABAU360910:0:Tyes10719170105
ABOR393595:0:Tyes34950
ABUT367737:0:Tyes---0-
ACAU438753:0:Tyes-1372013721350
ACEL351607:0:Tyes-144829301158
ACRY349163:8:Tyes-0-1487685
ADEH290397:0:Tyes-52505253456
AEHR187272:0:Tyes121101015
AFER243159:0:Tyes0465-4643
AHYD196024:0:Tyes23940
AMAR234826:0:Tyes-1-0-
AMAR329726:9:Tyes-2453013921390
AMET293826:0:Tyes-4274452642730
ANAE240017:0:Tyes---0-
AORE350688:0:Tyes-023941-
APHA212042:0:Tyes---0-
APLE416269:0:Tyes66566618396670
APLE434271:0:Tno63863918606400
ASAL382245:5:Tyes76059
ASP1667:3:Tyes---0803
ASP232721:2:Tyes0208016020793
ASP62928:0:Tyes107760906101080
ASP62977:0:Tyes7337320729736
ASP76114:2:Tyes31743393033923171
AVAR240292:3:Tyes-60313870456
BABO262698:1:Tno-2090209222
BAMB339670:2:Tno--0--
BAMB339670:3:Tno2211-0224
BAMB398577:3:Tno7976320631800
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BJAP224911:0:Fyes-02600322
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BLON206672:0:Tyes-0---
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BSP107806:2:Tyes54230
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BSUI204722:1:Tyes-2260226240
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CTRA471472:0:Tyes-0---
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FNOD381764:0:Tyes-01496--
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OANT439375:5:Tyes-15291150
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ZMOB264203:0:Tyes-6855356850



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