CANDIDATE ID: 217

CANDIDATE ID: 217

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9969590e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.0000072e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7636 (agaI) (b3141)
   Products of gene:
     - G7636-MONOMER (predicted galactosamine-6-phosphate isomerase)

- EG12766 (agaA) (b3135)
   Products of gene:
     - AGAA-MONOMER (predicted truncated N-acetylgalactosamine-6-phosphate deacetylase)

- EG11728 (yieK) (b3718)
   Products of gene:
     - EG11728-MONOMER (predicted 6-phosphogluconolactonase)

- EG10633 (nagB) (b0678)
   Products of gene:
     - GLUCOSAMINE-6-P-DEAMIN-MONOMER (NagB)
     - GLUCOSAMINE-6-P-DEAMIN-CPLX (glucosamine-6-phosphate deaminase)
       Reactions:
        D-glucosamine-6-phosphate + H2O  =  D-fructose-6-phosphate + ammonia + H+
         In pathways
         PWY-6517 (PWY-6517)
         P441-PWY (P441-PWY)
         GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)
         PWY-5514 (PWY-5514)
         GLUAMCAT-PWY (N-acetylglucosamine degradation I)

- EG10632 (nagA) (b0677)
   Products of gene:
     - NAG6PDEACET-MONOMER (NagA)
     - NAG6PDEACET-CPLX (N-acetylglucosamine-6-phosphate deacetylase)
       Reactions:
        N-acetyl-D-glucosamine-6-phosphate + H2O  ->  acetate + D-glucosamine-6-phosphate
         In pathways
         PWY-6517 (PWY-6517)
         P441-PWY (P441-PWY)
         GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)
         GLUAMCAT-PWY (N-acetylglucosamine degradation I)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 222
Effective number of orgs (counting one per cluster within 468 clusters): 138

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.5
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE322159 ncbi Streptococcus thermophilus LMD-95
STHE299768 ncbi Streptococcus thermophilus CNRZ10665
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
STHE264199 ncbi Streptococcus thermophilus LMG 183115
SSUI391296 ncbi Streptococcus suis 98HAH335
SSUI391295 ncbi Streptococcus suis 05ZYH335
SSP84588 ncbi Synechococcus sp. WH 81024
SSP64471 ncbi Synechococcus sp. CC93115
SSP1131 Synechococcus sp. CC96054
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153055
SPYO370554 ncbi Streptococcus pyogenes MGAS107505
SPYO370553 ncbi Streptococcus pyogenes MGAS20965
SPYO370552 ncbi Streptococcus pyogenes MGAS102705
SPYO370551 ncbi Streptococcus pyogenes MGAS94295
SPYO319701 ncbi Streptococcus pyogenes MGAS61805
SPYO293653 ncbi Streptococcus pyogenes MGAS50055
SPYO286636 ncbi Streptococcus pyogenes MGAS103945
SPYO198466 ncbi Streptococcus pyogenes MGAS3155
SPYO193567 ncbi Streptococcus pyogenes SSI-15
SPYO186103 ncbi Streptococcus pyogenes MGAS82325
SPYO160490 ncbi Streptococcus pyogenes M1 GAS5
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-145
SPNE171101 ncbi Streptococcus pneumoniae R65
SPNE170187 ncbi Streptococcus pneumoniae G545
SPNE1313 Streptococcus pneumoniae5
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SMUT210007 ncbi Streptococcus mutans UA1595
SLOI323850 ncbi Shewanella loihica PV-45
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14355
SGOR29390 Streptococcus gordonii Challis5
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1975
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2275
SAVE227882 ncbi Streptomyces avermitilis MA-46805
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR426430 ncbi Staphylococcus aureus aureus Newman5
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3005
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4765
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
SAGA211110 ncbi Streptococcus agalactiae NEM3165
SAGA208435 ncbi Streptococcus agalactiae 2603V/R5
SAGA205921 ncbi Streptococcus agalactiae A9095
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSP101510 ncbi Rhodococcus jostii RHA15
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332094
PSP117 Pirellula sp.4
PPRO298386 ncbi Photobacterium profundum SS95
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257455
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMAR74547 ncbi Prochlorococcus marinus MIT 93134
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PDIS435591 ncbi Parabacteroides distasonis ATCC 85035
PACN267747 ncbi Propionibacterium acnes KPA1712025
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
NSP35761 Nocardioides sp.4
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG15
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273435
LXYL281090 ncbi Leifsonia xyli xyli CTCB075
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LSAK314315 ncbi Lactobacillus sakei sakei 23K5
LPLA220668 ncbi Lactobacillus plantarum WCFS15
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82935
LLAC272623 ncbi Lactococcus lactis lactis Il14035
LLAC272622 ncbi Lactococcus lactis cremoris SK115
LJOH257314 ncbi Lactobacillus johnsonii NCC 5335
LINN272626 ncbi Listeria innocua Clip112625
LHEL405566 ncbi Lactobacillus helveticus DPC 45715
LGAS324831 ncbi Lactobacillus gasseri ATCC 333235
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118425
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3655
LCAS321967 ncbi Lactobacillus casei ATCC 3345
LBRE387344 ncbi Lactobacillus brevis ATCC 3675
LACI272621 ncbi Lactobacillus acidophilus NCFM5
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GOXY290633 ncbi Gluconobacter oxydans 621H4
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255865
FJOH376686 ncbi Flavobacterium johnsoniae UW1015
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5835
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPHY357809 ncbi Clostridium phytofermentans ISDg5
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT5
CJAP155077 Cellvibrio japonicus5
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130324
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131295
CDIF272563 ncbi Clostridium difficile 6305
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN4
CBLO203907 ncbi Candidatus Blochmannia floridanus4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BTUR314724 ncbi Borrelia turicatae 91E1355
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54825
BSUB ncbi Bacillus subtilis subtilis 1685
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BLON206672 ncbi Bifidobacterium longum NCC27055
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BHER314723 ncbi Borrelia hermsii DAH5
BHAL272558 ncbi Bacillus halodurans C-1255
BGAR290434 ncbi Borrelia garinii PBi5
BFRA295405 ncbi Bacteroides fragilis YCH465
BFRA272559 ncbi Bacteroides fragilis NCTC 93435
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BBUR224326 ncbi Borrelia burgdorferi B315
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAFZ390236 ncbi Borrelia afzelii PKo5
ASP1667 Arthrobacter sp.5
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
ANAE240017 Actinomyces oris MG14
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAUR290340 ncbi Arthrobacter aurescens TC14


Names of the homologs of the genes in the group in each of these orgs
  G7636   EG12766   EG11728   EG10633   EG10632   
YPSE349747 YPSIP31758_2909YPSIP31758_0936YPSIP31758_2909YPSIP31758_2909YPSIP31758_2910
YPSE273123 YPTB1119YPTB3082YPTB1119YPTB1119YPTB1118
YPES386656 YPDSF_2626YPDSF_0676YPDSF_2626YPDSF_2626YPDSF_2627
YPES377628 YPN_1113YPN_3040YPN_1113YPN_1113YPN_1112
YPES360102 YPA_2470YPA_0432YPA_2470YPA_2470YPA_2471
YPES349746 YPANGOLA_A0338YPANGOLA_A3370YPANGOLA_A0338YPANGOLA_A0338YPANGOLA_A0337
YPES214092 YPO2627YPO0838YPO2627YPO2627YPO2626
YPES187410 Y1202Y3223Y1202Y1202Y1201
YENT393305 YE2979YE2980YE2979YE2979YE2980
VVUL216895 VV2_1200VV2_1018VV2_1200VV2_1200VV1_0180
VVUL196600 VVA0028VVA1510VVA0028VVA0028VV1011
VPAR223926 VPA0038VP0829VPA0038VPA0038VP0829
VFIS312309 VF2357VFA0999VF2357VF2357VF0807
VCHO345073 VC0395_0216VC0395_A0515VC0395_0216VC0395_0216VC0395_A0515
VCHO VCA1025VC0994VCA1025VCA1025VC0994
TTEN273068 TTE1023TTE0232TTE1023TTE1023TTE0232
TSP1755 TETH514_1433TETH514_0184TETH514_1433TETH514_1433TETH514_0184
TPSE340099 TETH39_0992TETH39_2028TETH39_0992TETH39_0992TETH39_2028
STYP99287 STM0684STM0683STM0684STM0684STM0683
STHE322159 STER_0581STER_0537STER_0581STER_0581STER_0537
STHE299768 STR0541STR0501STR0541STR0541STR0501
STHE292459 STH606STH605STH606STH606STH1280
STHE264199 STU0541STU0501STU0541STU0541STU0501
SSUI391296 SSU98_0634SSU98_1274SSU98_0634SSU98_0634SSU98_1274
SSUI391295 SSU05_0634SSU05_1259SSU05_0634SSU05_0634SSU05_1259
SSP84588 SYNW0540OR1490SYNW2286OR0941SYNW0540OR1490SYNW2286OR0941
SSP64471 GSYN2383GSYN2785GSYN2383GSYN2383GSYN2785
SSP1131 SYNCC9605_2143SYNCC9605_2424SYNCC9605_2143SYNCC9605_2424
SSON300269 SSO_0632SSO_0631SSO_0632SSO_0632SSO_0631
SSED425104 SSED_0844SSED_1213SSED_0844SSED_0844SSED_1213
SSAP342451 SSP2149SSP2016SSP0235SSP0235SSP2016
SPYO370554 MGAS10750_SPY1246MGAS10750_SPY1500MGAS10750_SPY1246MGAS10750_SPY1246MGAS10750_SPY1500
SPYO370553 MGAS2096_SPY1205MGAS2096_SPY1412MGAS2096_SPY1205MGAS2096_SPY1205MGAS2096_SPY1412
SPYO370552 MGAS10270_SPY1209MGAS10270_SPY1507MGAS10270_SPY1209MGAS10270_SPY1209MGAS10270_SPY1507
SPYO370551 MGAS9429_SPY1186MGAS9429_SPY1388MGAS9429_SPY1186MGAS9429_SPY1186MGAS9429_SPY1388
SPYO319701 M28_SPY1133M28_SPY1431M28_SPY1133M28_SPY1133M28_SPY1431
SPYO293653 M5005_SPY1139M5005_SPY1388M5005_SPY1139M5005_SPY1139M5005_SPY1388
SPYO286636 M6_SPY1114M6_SPY1436M6_SPY1114M6_SPY1114M6_SPY1436
SPYO198466 SPYM3_1065SPYM3_1475SPYM3_1065SPYM3_1065SPYM3_1475
SPYO193567 SPS0798SPS0392SPS0798SPS0798SPS0392
SPYO186103 SPYM18_1407SPYM18_1705SPYM18_1407SPYM18_1407SPYM18_1705
SPYO160490 SPY1399SPY1694SPY1399SPY1399SPY1694
SPRO399741 SPRO_1227SPRO_1226SPRO_1227SPRO_1227SPRO_1226
SPNE488221 SP70585_1454SP70585_2144SP70585_1454SP70585_1454SP70585_2144
SPNE487214 SPH_1546SPH_2211SPH_1546SPH_1546SPH_2211
SPNE487213 SPT_0859SPT_2051SPT_0859SPT_0859SPT_2051
SPNE171101 SPR1272SPR1867SPR1272SPR1272SPR1867
SPNE170187 SPN05179SPN20022SPN05179SPN05179SPN20022
SPNE1313 SPJ_1314SPJ_2062SPJ_1314SPJ_1314SPJ_2062
SPEA398579 SPEA_1521SPEA_1102SPEA_1521SPEA_0760SPEA_1102
SMUT210007 SMU_636SMU_435SMU_636SMU_636SMU_435
SLOI323850 SHEW_0815SHEW_1117SHEW_0815SHEW_0815SHEW_1117
SHIGELLA AGAINAGAYIEKNAGBNAGA
SHAL458817 SHAL_0813SHAL_1150SHAL_0813SHAL_0813SHAL_1150
SHAE279808 SH0278SH0276SH0278SH0278SH0276
SGOR29390 SGO_1586SGO_0549SGO_1586SGO_1586SGO_0549
SGLO343509 SG0858SG0815SG0858SG0858SG0815
SFLE373384 SFV_0653SFV_0654SFV_3789SFV_0653SFV_0654
SFLE198214 AAN44646.1AAN42254.1AAN45184.1AAN42253.1AAN42254.1
SEPI176280 SE_0340SE_0473SE_0340SE_0340SE_0473
SEPI176279 SERP0215SERP0360SERP0215SERP0215SERP0360
SENT454169 SEHA_C0803SEHA_C0802SEHA_C0803SEHA_C0803SEHA_C0802
SENT321314 SCH_0705SCH_0704SCH_0705SCH_0705SCH_0704
SENT295319 SPA2057SPA2058SPA2057SPA2057SPA2058
SENT220341 STY0722STY0721STY0722STY0722STY0721
SENT209261 T2191T2192T2191T2191T2192
SELO269084 SYC0446_DSYC1078_DSYC0446_DSYC0446_DSYC1078_D
SDYS300267 SDY_0612SDY_0611SDY_0612SDY_0612SDY_0611
SCO SCO5236SCO4284SCO5236SCO5236SCO4284
SBOY300268 SBO_0540SBO_0539SBO_0540SBO_0540SBO_0539
SAVE227882 SAV3018SAV3941SAV3018SAV3018SAV3941
SAUR93062 SACOL0616SACOL0761SACOL0616SACOL0616SACOL0761
SAUR93061 SAOUHSC_00552SAOUHSC_00710SAOUHSC_00552SAOUHSC_00552SAOUHSC_00710
SAUR426430 NWMN_0532NWMN_0670NWMN_0532NWMN_0532NWMN_0670
SAUR418127 SAHV_0567SAHV_0698SAHV_0567SAHV_0567SAHV_0698
SAUR367830 SAUSA300_0554SAUSA300_0686SAUSA300_0554SAUSA300_0554SAUSA300_0686
SAUR359787 SAURJH1_0606SAURJH1_0741SAURJH1_0606SAURJH1_0606SAURJH1_0741
SAUR359786 SAURJH9_0592SAURJH9_0725SAURJH9_0592SAURJH9_0592SAURJH9_0725
SAUR282459 SAS0527SAS0666SAS0527SAS0527SAS0666
SAUR282458 SAR0573SAR0754SAR0573SAR0573SAR0754
SAUR273036 SAB0519SAB0650SAB0519SAB0650
SAUR196620 MW0524MW0663MW0524MW0524MW0663
SAUR158879 SA0527SA0656SA0527SA0527SA0656
SAUR158878 SAV0569SAV0701SAV0569SAV0569SAV0701
SAGA211110 GBS0819GBS0256GBS0819GBS0819GBS0256
SAGA208435 SAG_0799SAG_0266SAG_0799SAG_0799SAG_0266
SAGA205921 SAK_0924SAK_0338SAK_0924SAK_0924SAK_0338
RXYL266117 RXYL_1731RXYL_0658RXYL_1731RXYL_1731RXYL_0658
RSPH349102 RSPH17025_4131RSPH17025_2730RSPH17025_4131RSPH17025_4131RSPH17025_2730
RSP101510 RHA1_RO01547RHA1_RO01548RHA1_RO01547RHA1_RO01547RHA1_RO01548
RSAL288705 RSAL33209_1463RSAL33209_1452RSAL33209_1463RSAL33209_1463
PSP117 RB2532RB12559RB2532RB2532
PPRO298386 PBPRA1031PBPRB1042PBPRB0360PBPRA1031PBPRA1030
PPEN278197 PEPE_0335PEPE_1754PEPE_0335PEPE_0335PEPE_1528
PMUL272843 PM0875PM0874PM0875PM0875PM0874
PMAR74547 PMT1424PMT1424PMT1424PMT2039
PLUM243265 PLU1317PLU1316PLU1317PLU1317PLU1316
PING357804 PING_0490PING_0489PING_0490PING_0490PING_0489
PHAL326442 PSHAB0148PSHAB0157PSHAB0148PSHAB0148PSHAB0157
PDIS435591 BDI_2877BDI_0237BDI_3568BDI_3568BDI_3152
PACN267747 PPA0476PPA0484PPA0476PPA0476PPA0484
OIHE221109 OB0611OB2907OB0611OB0611OB2907
NSP35761 NOCA_4483NOCA_4483NOCA_4483NOCA_4484
MSUC221988 MS2205MS2204MS2205MS2205MS2204
MSP400668 MMWYL1_1652MMWYL1_1654MMWYL1_1652MMWYL1_1652MMWYL1_1654
MSP266779 MESO_1508MESO_2863MESO_1508MESO_1508MESO_2863
MSME246196 MSMEG_0501MSMEG_2119MSMEG_2118MSMEG_2118MSMEG_2119
MMYC272632 MSC_0821MSC_0533MSC_0821MSC_0821MSC_0533
MCAP340047 MCAP_0749MCAP_0438MCAP_0749MCAP_0749MCAP_0438
LXYL281090 LXX19480LXX19360LXX19480LXX19480LXX19360
LWEL386043 LWE0939LWE0938LWE0939LWE0939LWE0938
LSPH444177 BSPH_0351BSPH_1254BSPH_0351BSPH_0351BSPH_1254
LSAK314315 LSA0417LSA1588LSA0417LSA0417LSA1588
LPLA220668 LP_0226LP_0562LP_0226LP_0226LP_0562
LMON265669 LMOF2365_0896LMOF2365_2141LMOF2365_2708LMOF2365_0977LMOF2365_2141
LMON169963 LMO0877LMO2108LMO2721LMO0957LMO2108
LMES203120 LEUM_0354LEUM_0425LEUM_0354LEUM_0354LEUM_0425
LLAC272623 L14408L173068L152419L14408L173068
LLAC272622 LACR_1667LACR_1458LACR_2160LACR_1667LACR_1458
LJOH257314 LJ_1823LJ_0118LJ_1823LJ_1823LJ_0118
LINN272626 LIN0875LIN2213LIN2869LIN0956LIN2213
LHEL405566 LHV_2077LHV_0514LHV_2077LHV_2077LHV_0514
LGAS324831 LGAS_1861LGAS_0116LGAS_1861LGAS_1861LGAS_0116
LDEL390333 LDB2190LDB0197LDB2190LDB2190LDB0197
LDEL321956 LBUL_2010LBUL_0171LBUL_2010LBUL_2010LBUL_0171
LCAS321967 LSEI_2889LSEI_1808LSEI_2889LSEI_2889LSEI_1808
LBRE387344 LVIS_0689LVIS_0539LVIS_0689LVIS_0689LVIS_0539
LACI272621 LBA1948LBA0144LBA1948LBA1948LBA0144
KPNE272620 GKPORF_B5124GKPORF_B5123GKPORF_B3467GKPORF_B5124GKPORF_B5123
HSOM228400 HSM_1505HSM_1504HSM_1505HSM_1504
HSOM205914 HS_1027HS_1026HS_1027HS_1026
HINF71421 HI_0141HI_0140HI_0141HI_0141HI_0140
HINF374930 CGSHIEE_02580CGSHIEE_02585CGSHIEE_02580CGSHIEE_02580CGSHIEE_02585
HINF281310 NTHI0227NTHI0226NTHI0227NTHI0227NTHI0226
HDUC233412 HD_1847HD_1845HD_1847HD_1847HD_1845
HCHE349521 HCH_06984HCH_06986HCH_06984HCH_06984HCH_06986
GTHE420246 GTNG_2204GTNG_2205GTNG_2204GTNG_2204GTNG_2205
GOXY290633 GOX1473GOX1470GOX1470GOX1473
GKAU235909 GK2276GK2277GK2276GK2276GK2277
FNUC190304 FN1143FN1133FN1143FN1143FN1133
FJOH376686 FJOH_4812FJOH_3974FJOH_4812FJOH_4812FJOH_3974
ESP42895 ENT638_3582ENT638_1192ENT638_1193ENT638_1193ENT638_1192
EFER585054 EFER_4350EFER_4356EFER_4016EFER_2431EFER_2432
EFAE226185 EF_0466EF_1317EF_0451EF_0466EF_1317
ECOO157 AGAI_2Z4489NAGBNAGBNAGA
ECOL83334 ECS0708ECS4015ECS0708ECS0708ECS0707
ECOL585397 ECED1_3805ECED1_3799ECED1_4408ECED1_0659ECED1_0658
ECOL585057 ECIAI39_3642ECIAI39_3636ECIAI39_0635ECIAI39_0635ECIAI39_0634
ECOL585056 ECUMN_3625ECUMN_3619ECUMN_0763ECUMN_0763ECUMN_0762
ECOL585055 EC55989_3561EC55989_3555EC55989_4188EC55989_0664EC55989_0663
ECOL585035 ECS88_3529ECS88_3523ECS88_4140ECS88_0703ECS88_0702
ECOL585034 ECIAI1_3291ECIAI1_3285ECIAI1_3898ECIAI1_0656ECIAI1_0655
ECOL481805 ECOLC_0557ECOLC_0563ECOLC_4276ECOLC_2978ECOLC_2979
ECOL469008 ECBD_0599ECBD_0605ECBD_4314ECBD_2984ECBD_2985
ECOL439855 ECSMS35_3440ECSMS35_3434ECSMS35_0698ECSMS35_0698ECSMS35_0697
ECOL413997 ECB_03008ECB_03002ECB_03602ECB_00635ECB_00634
ECOL409438 ECSE_3427ECSE_3421ECSE_4004ECSE_0738ECSE_0737
ECOL405955 APECO1_3286APECO1_3292APECO1_2743APECO1_1394APECO1_1395
ECOL364106 UTI89_C3572UTI89_C3566UTI89_C4269UTI89_C0672UTI89_C0671
ECOL362663 ECP_3233ECP_3227ECP_3917ECP_0690ECP_0689
ECOL331111 ECE24377A_3623ECE24377A_3617ECE24377A_4227ECE24377A_0703ECE24377A_0702
ECOL316407 ECK3129:JW3110:B3141ECK3123:JW5527:B3135ECK3711:JW5613:B3718ECK0666:JW0664:B0678ECK0665:JW0663:B0677
ECOL199310 C3898C3892C4640C0753C0752
ECAR218491 ECA1326ECA1325ECA1326ECA1326ECA1325
CPSY167879 CPS_1008CPS_1027CPS_1008CPS_1008CPS_1027
CPHY357809 CPHY_3582CPHY_3581CPHY_3582CPHY_3582CPHY_3581
CPER289380 CPR_2431CPR_2144CPR_2431CPR_2431CPR_2144
CPER195103 CPF_2744CPF_2434CPF_2744CPF_2744CPF_2434
CPER195102 CPE2434CPE2176CPE2434CPE2434CPE2176
CNOV386415 NT01CX_1482NT01CX_0291NT01CX_1482NT01CX_1482NT01CX_0291
CJAP155077 CJA_1164CJA_1163CJA_1164CJA_1164CJA_1163
CGLU196627 CG2928CG2929CG2928CG2928
CDIP257309 DIP0521DIP0520DIP0521DIP0521DIP0520
CDIF272563 CD1011CD3453CD1011CD1011CD1010
CBOT536232 CLM_3197CLM_3198CLM_3197CLM_3197CLM_3198
CBOT515621 CLJ_B3060CLJ_B3061CLJ_B3060CLJ_B3060CLJ_B3061
CBOT508765 CLL_A0717CLL_A0716CLL_A0717CLL_A0717CLL_A3135
CBOT498213 CLD_1741CLD_1740CLD_1741CLD_1741CLD_1740
CBOT441772 CLI_2883CLI_2884CLI_2883CLI_2883CLI_2884
CBOT441771 CLC_2710CLC_2711CLC_2710CLC_2710CLC_2711
CBOT441770 CLB_2777CLB_2778CLB_2777CLB_2777CLB_2778
CBOT36826 CBO2833CBO2834CBO2833CBO2833CBO2834
CBLO291272 BPEN_331BPEN_330BPEN_331BPEN_330
CBLO203907 BFL323BFL322BFL323BFL322
CBEI290402 CBEI_4562CBEI_4564CBEI_4562CBEI_4562CBEI_4564
CACE272562 CAC0187CAC0188CAC0187CAC0187CAC0188
BWEI315730 BCERKBAB4_3883BCERKBAB4_3884BCERKBAB4_3883BCERKBAB4_3883BCERKBAB4_3884
BTUR314724 BT0152BT0151BT0152BT0152BT0151
BTHU412694 BALH_3670BALH_3671BALH_3670BALH_3670BALH_3671
BTHU281309 BT9727_3795BT9727_3796BT9727_3795BT9727_3795BT9727_3796
BTHE226186 BT_4127BT_0675BT_4127BT_4127BT_0676
BSUB BSU35020BSU35010BSU02360BSU35020BSU35010
BPUM315750 BPUM_3139BPUM_3138BPUM_3139BPUM_3139BPUM_3138
BLON206672 BL1343BL1344BL1343BL1343BL1344
BLIC279010 BL00599BL00084BL00599BL00085BL00084
BHER314723 BH0152BH0151BH0152BH0152BH0151
BHAL272558 BH0420BH0421BH0420BH0420BH0421
BGAR290434 BG0150BG0149BG0150BG0150BG0149
BFRA295405 BF0984BF3115BF0984BF0984BF3115
BFRA272559 BF0905BF2952BF0905BF0905BF2952
BCLA66692 ABC1490ABC1489ABC1490ABC1490ABC1489
BCER572264 BCA_4166BCA_4167BCA_4166BCA_4166BCA_4167
BCER405917 BCE_4121BCE_1905BCE_4121BCE_4121BCE_1905
BCER315749 BCER98_2753BCER98_2754BCER98_2753BCER98_2753BCER98_2754
BCER288681 BCE33L3810BCE33L1640BCE33L3810BCE33L3810BCE33L1640
BCER226900 BC_4054BC_4055BC_4054BC_4054BC_4055
BBUR224326 BB_0152BB_0151BB_0152BB_0152BB_0151
BANT592021 BAA_4296BAA_4297BAA_4296BAA_4296BAA_4297
BANT568206 BAMEG_4314BAMEG_4315BAMEG_4314BAMEG_4314BAMEG_4315
BANT261594 GBAA4273GBAA4274GBAA4273GBAA4273GBAA4274
BANT260799 BAS3964BAS3965BAS3964BAS3964BAS3965
BAMY326423 RBAM_032210RBAM_032200RBAM_032210RBAM_032210RBAM_032200
BAFZ390236 BAPKO_0153BAPKO_0152BAPKO_0153BAPKO_0153BAPKO_0152
ASP1667 ARTH_0180ARTH_0181ARTH_0180ARTH_3512ARTH_3513
ASAL382245 ASA_2828ASA_2829ASA_2828ASA_2828ASA_2829
APLE434271 APJL_1790APJL_1791APJL_1790APJL_1790APJL_1791
APLE416269 APL_1755APL_1756APL_1755APL_1755APL_1756
ANAE240017 ANA_0349ANA_0177ANA_0349ANA_0349
AMET293826 AMET_4182AMET_4181AMET_4182AMET_4182AMET_4181
AHYD196024 AHA_1526AHA_0806AHA_1526AHA_1526AHA_1525
ABAC204669 ACID345_2909ACID345_2780ACID345_2909ACID345_2780
AAUR290340 AAUR_2579AAUR_2589AAUR_2579AAUR_2579


Organism features enriched in list (features available for 207 out of the 222 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 5.544e-146592
Arrangment:Clusters 7.631e-61517
Arrangment:Pairs 1.395e-1171112
Disease:Botulism 0.005468255
Disease:Bubonic_plague 0.001911066
Disease:Dysentery 0.001911066
Disease:Gastroenteritis 0.00222381013
Disease:Meningitis 0.008717267
Disease:Pneumonia 0.00007481112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 9.487e-61111
Disease:Wide_range_of_infections 9.487e-61111
Endospores:Yes 1.633e-83853
GC_Content_Range4:0-40 1.097e-6102213
GC_Content_Range4:40-60 0.004089393224
GC_Content_Range4:60-100 1.250e-1712145
GC_Content_Range7:30-40 0.000054279166
GC_Content_Range7:60-70 3.964e-189134
Genome_Size_Range5:0-2 0.000059636155
Genome_Size_Range5:4-6 1.014e-691184
Genome_Size_Range5:6-10 0.0022524847
Genome_Size_Range9:1-2 0.000771331128
Genome_Size_Range9:2-3 0.007406553120
Genome_Size_Range9:4-5 0.00026374996
Genome_Size_Range9:5-6 0.00353924288
Genome_Size_Range9:6-8 0.0011278538
Gram_Stain:Gram_Neg 2.452e-887333
Gram_Stain:Gram_Pos 1.000e-26108150
Habitat:Aquatic 0.00002871691
Habitat:Multiple 0.001642478178
Habitat:Specialized 0.0003857853
Motility:No 0.000841669151
Optimal_temp.:- 0.003165177257
Optimal_temp.:20-30 0.008717267
Optimal_temp.:25-30 0.0022368119
Optimal_temp.:25-35 0.00097821114
Optimal_temp.:30-35 0.008717267
Optimal_temp.:30-37 1.745e-71718
Optimal_temp.:37 0.006241248106
Oxygen_Req:Aerobic 2.264e-1328185
Oxygen_Req:Facultative 7.144e-32136201
Pathogenic_in:Human 4.569e-12114213
Pathogenic_in:No 0.000051759226
Salinity:Non-halophilic 0.001113151106
Shape:Coccus 2.502e-75082
Shape:Rod 0.0014276139347
Shape:Spiral 0.0039424534
Temp._range:Hyperthermophilic 0.0004369123
Temp._range:Mesophilic 2.234e-6188473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 263
Effective number of orgs (counting one per cluster within 468 clusters): 229

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10401
SSP1148 ncbi Synechocystis sp. PCC 68030
SLAC55218 Ruegeria lacuscaerulensis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT264198 ncbi Ralstonia eutropha JMP1340
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30000
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI30
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A1
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHEN283166 ncbi Bartonella henselae Houston-10
BCIC186490 Candidatus Baumannia cicadellinicola0
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7636   EG12766   EG11728   EG10633   EG10632   
XAUT78245
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TPAL243276
TKOD69014
TDEN326298
TDEN292415
TCRU317025
TACI273075
SWOL335541
SSP321332
SSP321327
SSP292414 TM1040_3148
SSP1148
SLAC55218
SFUM335543 SFUM_2912
SALA317655
SACI56780 SYN_02958
SACI330779
RTYP257363
RSP357808
RSOL267608
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RFER338969
RFEL315456
REUT264198
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820 PTO0013
PTHE370438
PSYR223283
PSYR205918
PSTU379731
PSP56811
PSP312153
PSP296591
PPUT76869
PPUT351746
PPUT160488
PNAP365044
PMEN399739
PMAR93060
PMAR74546
PMAR59920 PMN2A_1535
PMAR167555 NATL1_02421
PMAR167546
PMAR167542
PMAR167540
PMAR167539 PRO_0192
PMAR146891
PLUT319225
PISL384616
PINT246198
PHOR70601
PFUR186497
PCRY335284
PCAR338963
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSEN222891
NPHA348780
NOCE323261 NOC_1348
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUT335283
NEUR228410
MVAN350058
MTHE349307
MTHE264732
MTHE187420
MSTA339860
MSP189918
MSP164757
MSP164756
MSED399549
MPNE272634
MPET420662
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHUN323259
MGIL350054
MGEN243273
MFLO265311 MFL031
MFLA265072
MCAP243233
MBUR259564
MBAR269797
MART243272
MAQU351348
MAEO419665
MACE188937
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LINT363253
LINT267671
LINT189518
LBOR355277
LBOR355276
LBIF456481
LBIF355278
JSP375286
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HHEP235279
HHAL349124
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GMET269799
GFOR411154
GBET391165
FSUC59374
FSP106370
FNOD381764 FNOD_0810
FMAG334413
FALN326424
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DPSY177439
DOLE96561
DNOD246195 DNO_0309
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSAL290398
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMET456442
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CABO218497
BXEN266265
BTRI382640
BSP376
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BJAP224911
BHEN283166
BCIC186490
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
AYEL322098
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
APHA212042
APER272557
AMAR234826
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACAU438753
ABUT367737
ABOR393595
ABAU360910
AAVE397945
AAEO224324


Organism features enriched in list (features available for 249 out of the 263 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 7.340e-81792
Arrangment:Pairs 3.668e-725112
Disease:Pharyngitis 0.001037288
Disease:bronchitis_and_pneumonitis 0.001037288
Endospores:Yes 1.212e-6753
Genome_Size_Range5:0-2 1.046e-10100155
Genome_Size_Range5:4-6 1.348e-946184
Genome_Size_Range5:6-10 0.00532191247
Genome_Size_Range9:1-2 6.851e-983128
Genome_Size_Range9:4-5 0.00010832596
Genome_Size_Range9:5-6 0.00003742188
Gram_Stain:Gram_Neg 0.0002461162333
Gram_Stain:Gram_Pos 7.132e-1920150
Habitat:Aquatic 0.00022505491
Habitat:Multiple 0.002777062178
Habitat:Terrestrial 0.0094518731
Motility:No 3.665e-739151
Optimal_temp.:- 0.0025007125257
Optimal_temp.:25-35 0.0039562114
Oxygen_Req:Anaerobic 0.000060161102
Oxygen_Req:Facultative 8.974e-1740201
Oxygen_Req:Microaerophilic 0.00765351318
Pathogenic_in:Human 9.877e-764213
Pathogenic_in:No 0.0012657113226
Salinity:Moderate_halophilic 0.00407091012
Shape:Coccus 0.00133882382
Shape:Irregular_coccus 9.237e-61617
Shape:Rod 6.583e-7120347
Shape:Spiral 6.686e-62734
Temp._range:Mesophilic 9.863e-6182473
Temp._range:Thermophilic 0.00676682235



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 7
Effective number of orgs (counting one per cluster within 468 clusters): 6

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG1 0.00002161685
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 27343 0.00002291705
BGAR290434 ncbi Borrelia garinii PBi 0.00009232245
BAFZ390236 ncbi Borrelia afzelii PKo 0.00010322295
BBUR224326 ncbi Borrelia burgdorferi B31 0.00011022325
BHER314723 ncbi Borrelia hermsii DAH 0.00013082405
BTUR314724 ncbi Borrelia turicatae 91E135 0.00014512455


Names of the homologs of the genes in the group in each of these orgs
  G7636   EG12766   EG11728   EG10633   EG10632   
MMYC272632 MSC_0821MSC_0533MSC_0821MSC_0821MSC_0533
MCAP340047 MCAP_0749MCAP_0438MCAP_0749MCAP_0749MCAP_0438
BGAR290434 BG0150BG0149BG0150BG0150BG0149
BAFZ390236 BAPKO_0153BAPKO_0152BAPKO_0153BAPKO_0153BAPKO_0152
BBUR224326 BB_0152BB_0151BB_0152BB_0152BB_0151
BHER314723 BH0152BH0151BH0152BH0152BH0151
BTUR314724 BT0152BT0151BT0152BT0152BT0151


Organism features enriched in list (features available for 7 out of the 7 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Lyme_disease 0.000123822
Disease:Tick-borne_relapsing_fever 0.000123822
Endospores:No 0.00076267211
GC_Content_Range4:0-40 0.00081557213
GC_Content_Range7:0-30 1.436e-8747
Genome_Size_Range5:0-2 0.00008497155
Genome_Size_Range9:0-1 0.0026301327
Habitat:Host-associated 0.00064327206
Shape:Spiral 9.555e-6534



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241690.6229
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3562160.6037
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)1341210.5975
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))1211130.5921
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation)1351200.5849
P122-PWY (heterolactic fermentation)1191080.5593
PWY-5497 (purine nucleotides degradation IV (anaerobic))1221080.5450
PWY-5493 (reductive monocarboxylic acid cycle)2431630.5250
PWY0-1295 (pyrimidine ribonucleosides degradation I)2391590.5089
PWY-5480 (pyruvate fermentation to ethanol I)109950.4954
SUCUTIL-PWY (sucrose degradation I)1241030.4937
MANNIDEG-PWY (mannitol degradation I)99880.4833
TEICHOICACID-PWY (teichoic acid (poly-glycerol) biosynthesis)98860.4702
P441-PWY (superpathway of N-acetylneuraminate degradation)63630.4508
LACTOSECAT-PWY (lactose and galactose degradation I)71680.4504
MANNCAT-PWY (D-mannose degradation)3081750.4374
ARABCAT-PWY (L-arabinose degradation I)128980.4346
PWY0-1296 (purine ribonucleosides degradation)3161760.4250
PWY0-181 (salvage pathways of pyrimidine deoxyribonucleotides)2871650.4218
IDNCAT-PWY (L-idonate degradation)2461480.4137
PWY0-301 (L-ascorbate degradation, anaerobic)84720.4128
GLUCUROCAT-PWY (β-D-glucuronide and D-glucuronate degradation)2081320.4114
PWY0-522 (lipoate salvage and modification)2201360.4040
PWY-922 (mevalonate pathway I)1991270.4032
METHIONINE-DEG1-PWY (methionine degradation I (to homocysteine))31535-.5178



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12766   EG11728   EG10633   EG10632   
G76360.9995480.9999120.9999330.999516
EG127660.99950.9995560.999984
EG117280.9999170.999481
EG106330.999612
EG10632



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PAIRWISE BLAST SCORES:

  G7636   EG12766   EG11728   EG10633   EG10632   
G76360.0f0-4.5e-43.3e-9-
EG12766-0.0f0--2.0e-18
EG11728--0.0f03.6e-6-
EG106331.4e-9-1.3e-90.0f0-
EG10632----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- GLUAMCAT-PWY (N-acetylglucosamine degradation I) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9996 EG10633 (nagB) GLUCOSAMINE-6-P-DEAMIN-MONOMER (NagB)
   *in cand* 0.9997 0.9995 EG10632 (nagA) NAG6PDEACET-MONOMER (NagA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9995 EG11728 (yieK) EG11728-MONOMER (predicted 6-phosphogluconolactonase)
   *in cand* 0.9997 0.9995 EG12766 (agaA) AGAA-MONOMER (predicted truncated N-acetylgalactosamine-6-phosphate deacetylase)
   *in cand* 0.9998 0.9995 G7636 (agaI) G7636-MONOMER (predicted galactosamine-6-phosphate isomerase)

- GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation) (degree of match pw to cand: 0.400, degree of match cand to pw: 0.400, average score: 0.948)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9995 EG10632 (nagA) NAG6PDEACET-MONOMER (NagA)
   *in cand* 0.9998 0.9996 EG10633 (nagB) GLUCOSAMINE-6-P-DEAMIN-MONOMER (NagB)
             0.9133 0.8327 G7676 (nanK) NANK-MONOMER (N-acetylmannosamine kinase)
             0.9213 0.8722 EG10637 (nanA) ACNEULY-MONOMER (NanA)
             0.9797 0.9477 G7677 (nanE) NANE-MONOMER (predicted N-acetylmannosamine-6-phosphate epimerase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9995 EG11728 (yieK) EG11728-MONOMER (predicted 6-phosphogluconolactonase)
   *in cand* 0.9997 0.9995 EG12766 (agaA) AGAA-MONOMER (predicted truncated N-acetylgalactosamine-6-phosphate deacetylase)
   *in cand* 0.9998 0.9995 G7636 (agaI) G7636-MONOMER (predicted galactosamine-6-phosphate isomerase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10632 EG10633 (centered at EG10633)
EG11728 (centered at EG11728)
EG12766 (centered at EG12766)
G7636 (centered at G7636)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7636   EG12766   EG11728   EG10633   EG10632   
244/623338/623233/623251/623340/623
AAUR290340:2:Tyes01000-
ABAC204669:0:Tyes1290-1290
ACEL351607:0:Tyes-0--0
ACRY349163:8:Tyes-0--0
AHYD196024:0:Tyes7050705705704
ALAI441768:0:Tyes0-00-
AMAR329726:9:Tyes-0--0
AMET293826:0:Tyes10110
ANAE240017:0:Tyes1600160160-
AORE350688:0:Tyes0-00-
APLE416269:0:Tyes01001
APLE434271:0:Tno01001
ASAL382245:5:Tyes01001
ASP1667:3:Tyes01033633364
AVAR240292:3:Tyes-0-16790
BABO262698:0:Tno-0--0
BAFZ390236:2:Fyes10110
BAMB339670:3:Tno-0--0
BAMB398577:3:Tno-0--0
BAMY326423:0:Tyes10110
BANT260799:0:Tno01001
BANT261594:2:Tno01001
BANT568206:2:Tyes01001
BANT592021:2:Tno01001
BBUR224326:21:Fno10110
BCAN483179:0:Tno-0--0
BCEN331271:2:Tno-0--0
BCEN331272:3:Tyes-0--0
BCER226900:1:Tyes01001
BCER288681:0:Tno21560215621560
BCER315749:1:Tyes01001
BCER405917:1:Tyes20860208620860
BCER572264:1:Tno01001
BCLA66692:0:Tyes10110
BFRA272559:1:Tyes02000002000
BFRA295405:0:Tno02158002158
BGAR290434:2:Fyes10110
BHAL272558:0:Tyes01001
BHER314723:0:Fyes10110
BLIC279010:0:Tyes03507035083507
BLON206672:0:Tyes01001
BMAL243160:1:Tno-0--0
BMAL320388:1:Tno-0--0
BMAL320389:1:Tyes-0--0
BMEL224914:0:Tno-0--0
BMEL359391:0:Tno-0--0
BOVI236:0:Tyes-0--0
BPSE272560:1:Tyes-0--0
BPSE320372:1:Tno-0--0
BPSE320373:1:Tno-0--0
BPUM315750:0:Tyes10110
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