CANDIDATE ID: 224

CANDIDATE ID: 224

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9986490e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10517 (kdpE) (b0694)
   Products of gene:
     - KDPE-MONOMER (KdpE transcriptional activator)
     - PHOSPHO-KDPE (KdpE-Phosphorylated)
     - CPLX0-7795 (KdpE-Phosphorylated transcriptional activator)
       Regulatees:
        TU00035 (kdpFABC)

- EG10516 (kdpD) (b0695)
   Products of gene:
     - PHOSPHO-KDPD (KdpD sensory histidine kinase - phosphorylated)
     - KDPD-MONOMER (KdpD)
     - KDPD-CPLX (KdpD sensory histidine kinase)

- EG10515 (kdpC) (b0696)
   Products of gene:
     - EG10515-MONOMER (KdpC)
     - ATPASE-1-CPLX (potassium ion P-type ATPase transporter)
       Reactions:
        K+[periplasmic space] + ATP + H2O  ->  K+[cytosol] + phosphate + ADP

- EG10514 (kdpB) (b0697)
   Products of gene:
     - KDPB-MONOMER (KdpB)
     - ATPASE-1-CPLX (potassium ion P-type ATPase transporter)
       Reactions:
        K+[periplasmic space] + ATP + H2O  ->  K+[cytosol] + phosphate + ADP

- EG10513 (kdpA) (b0698)
   Products of gene:
     - EG10513-MONOMER (KdpA)
     - ATPASE-1-CPLX (potassium ion P-type ATPase transporter)
       Reactions:
        K+[periplasmic space] + ATP + H2O  ->  K+[cytosol] + phosphate + ADP



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 223
Effective number of orgs (counting one per cluster within 468 clusters): 144

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py25
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
SSP1148 ncbi Synechocystis sp. PCC 68035
SSON300269 ncbi Shigella sonnei Ss0465
SPRO399741 ncbi Serratia proteamaculans 5685
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14355
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2274
SAVE227882 ncbi Streptomyces avermitilis MA-46805
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSP101510 ncbi Rhodococcus jostii RHA15
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332095
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24404
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PDIS435591 ncbi Parabacteroides distasonis ATCC 85034
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
PACN267747 ncbi Propionibacterium acnes KPA1712025
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NSP103690 ncbi Nostoc sp. PCC 71205
NHAM323097 ncbi Nitrobacter hamburgensis X145
NFAR247156 ncbi Nocardia farcinica IFM 101525
MXAN246197 ncbi Myxococcus xanthus DK 16225
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-15
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra5
MTUB336982 ncbi Mycobacterium tuberculosis F115
MTBRV ncbi Mycobacterium tuberculosis H37Rv5
MTBCDC ncbi Mycobacterium tuberculosis CDC15515
MSP189918 ncbi Mycobacterium sp. KMS5
MSP164757 ncbi Mycobacterium sp. JLS5
MSP164756 ncbi Mycobacterium sp. MCS5
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P25
MBOV233413 ncbi Mycobacterium bovis AF2122/975
MAVI243243 ncbi Mycobacterium avium 1045
MAER449447 ncbi Microcystis aeruginosa NIES-8435
MABS561007 ncbi Mycobacterium abscessus ATCC 199775
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1305
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566015
LINN272626 ncbi Listeria innocua Clip112625
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HARS204773 ncbi Herminiimonas arsenicoxydans5
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GURA351605 ncbi Geobacter uraniireducens Rf45
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL351581 Francisella tularensis holarctica FSC2004
FSP1855 Frankia sp. EAN1pec5
FSP106370 ncbi Frankia sp. CcI35
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FJOH376686 ncbi Flavobacterium johnsoniae UW1014
FALN326424 ncbi Frankia alni ACN14a5
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5835
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DRAD243230 ncbi Deinococcus radiodurans R14
DGEO319795 ncbi Deinococcus geothermalis DSM 113005
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSP78 Caulobacter sp.5
CPER195103 ncbi Clostridium perfringens ATCC 131245
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3825
CMIC31964 ncbi Clavibacter michiganensis sepedonicus5
CMET456442 ncbi Candidatus Methanoregula boonei 6A84
CKLU431943 ncbi Clostridium kluyveri DSM 5555
CJEJ407148 ncbi Campylobacter jejuni jejuni 811164
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1764
CJEI306537 ncbi Corynebacterium jeikeium K4115
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334064
CDIF272563 ncbi Clostridium difficile 6305
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CAULO ncbi Caulobacter crescentus CB155
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54824
BTHA271848 ncbi Burkholderia thailandensis E2645
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BFRA295405 ncbi Bacteroides fragilis YCH464
BFRA272559 ncbi Bacteroides fragilis NCTC 93434
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1004
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
AVAR240292 ncbi Anabaena variabilis ATCC 294135
ASP62977 ncbi Acinetobacter sp. ADP15
ASP1667 Arthrobacter sp.5
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  EG10517   EG10516   EG10515   EG10514   EG10513   
YPSE349747 YPSIP31758_1102YPSIP31758_1103YPSIP31758_1104YPSIP31758_1106YPSIP31758_1108
YPSE273123 YPTB2920YPTB2919YPTB2918YPTB2917YPTB2916
YPES386656 YPDSF_1585YPDSF_1582YPDSF_1581YPDSF_1580
YPES377628 YPN_1175YPN_1176YPN_1177YPN_1178YPN_1179
YPES360102 YPA_2418YPA_2419YPA_2420YPA_2421YPA_2422
YPES349746 YPANGOLA_A3578YPANGOLA_A3579YPANGOLA_A3580YPANGOLA_A3581YPANGOLA_A3582
YPES214092 YPO2688YPO2689YPO2690YPO2691YPO2692
YPES187410 Y1261Y1262Y1263Y1264Y1265
YENT393305 YE2964YE2963YE2962YE2961YE2960
XORY360094 XOOORF_1062XOOORF_1061XOOORF_1060XOOORF_1059XOOORF_1058
XORY342109 XOO3620XOO3621XOO3622XOO3623XOO3624
XORY291331 XOO3842XOO3843XOO3844XOO3845XOO3846
XCAM487884 XCC-B100_3649XCC-B100_3650XCC-B100_3651XCC-B100_3652XCC-B100_3653
XCAM316273 XCAORF_0873XCAORF_0872XCAORF_0871XCAORF_0870XCAORF_0869
XCAM314565 XC_3528XC_3529XC_3530XC_3531XC_3532
XCAM190485 XCC0706XCC0705XCC0704XCC0703XCC0702
XAXO190486 XAC0760XAC0759XAC0758XAC0757XAC0756
XAUT78245 XAUT_3235XAUT_3236XAUT_3237XAUT_3238XAUT_3240
TTEN273068 TTE1633TTE2155TTE2010TTE2011TTE2012
STYP99287 STM0702STM0703STM0704STM0705STM0706
SSP1148 SLL0396SLR1731SLR1730SLR1729SLR1728
SSON300269 SSO_0645SSO_0646SSO_0647SSO_0648SSO_0649
SPRO399741 SPRO_1244SPRO_1245SPRO_1246SPRO_1247SPRO_1248
SMEL266834 SMA2325SMA2327SMA2329SMA2331SMA2333
SMED366394 SMED_5362SMED_5361SMED_5360SMED_5359SMED_5358
SHAE279808 SH0031SH0032SH0035SH0034SH0033
SFUM335543 SFUM_2617SFUM_2618SFUM_2619SFUM_2620
SERY405948 SACE_6085SACE_6086SACE_6087SACE_6088SACE_6089
SEPI176279 SERP2490SERP2489SERP2485SERP2486SERP2487
SENT454169 SEHA_C0824SEHA_C0825SEHA_C0826SEHA_C0827SEHA_C0828
SENT321314 SCH_0722SCH_0723SCH_0724SCH_0725SCH_0726
SENT295319 SPA2039SPA2038SPA2037SPA2036SPA2035
SENT220341 STY0743STY0744STY0745STY0746STY0747
SENT209261 T2172T2173T2171T2170T2169
SELO269084 SYC2362_CSYC2419_CSYC2420_CSYC2421_C
SCO SCO5872SCO5871SCO3716SCO3717SCO3718
SBOY300268 SBO_0556SBO_0557SBO_0559SBO_0560
SAVE227882 SAV2395SAV2396SAV917SAV918SAV919
SAUR93062 SACOL2070SACOL2066SACOL2067SACOL2068
SAUR93061 SAOUHSC_02314SAOUHSC_02310SAOUHSC_02311SAOUHSC_02312
SAUR426430 NWMN_1983NWMN_1980NWMN_1981NWMN_1982
SAUR418127 SAHV_0069SAHV_2063SAHV_2060SAHV_0072SAHV_0071
SAUR367830 SAUSA300_2035SAUSA300_2032SAUSA300_2033SAUSA300_2034
SAUR359787 SAURJH1_0059SAURJH1_2153SAURJH1_0063SAURJH1_2151SAURJH1_0061
SAUR359786 SAURJH9_0057SAURJH9_2115SAURJH9_0061SAURJH9_2113SAURJH9_0059
SAUR282459 SAS1983SAS1980SAS1981SAS1982
SAUR282458 SAR0068SAR2166SAR2163SAR0071SAR0070
SAUR273036 SAB1963SAB1960CSAB1961CSAB1962C
SAUR196620 MW2002MW1999MW2000MW2001
SAUR158879 SA0066SA1882SA1879SA1880SA0068
SAUR158878 SAV0070SAV2078SAV2075SAV0073SAV0072
RSPH349102 RSPH17025_3787RSPH17025_1474RSPH17025_3785RSPH17025_3783RSPH17025_3784
RSPH349101 RSPH17029_2927RSPH17029_2926RSPH17029_2925RSPH17029_2924RSPH17029_2923
RSPH272943 RSP_1269RSP_1268RSP_1267RSP_1266RSP_1265
RSP101510 RHA1_RO01228RHA1_RO01229RHA1_RO01230RHA1_RO01231RHA1_RO01232
RSOL267608 RSC3087RSC3385RSC3384RSC3383RSC3382
RSAL288705 RSAL33209_0917RSAL33209_0916RSAL33209_0915RSAL33209_0914RSAL33209_0910
RRUB269796 RRU_A1159RRU_A1158RRU_A1157RRU_A1156RRU_A1155
RPAL316058 RPB_4649RPB_4648RPB_4647RPB_4646RPB_4645
RPAL316057 RPD_0666RPD_0665RPD_0664RPD_0663RPD_0662
RPAL316056 RPC_4546RPC_4547RPC_4548RPC_4549RPC_4550
RPAL316055 RPE_4628RPE_4627RPE_4626RPE_4625RPE_4624
RPAL258594 RPA3000RPA3001RPA3002RPA3003RPA3004
RMET266264 RMET_0042RMET_0041RMET_0040RMET_0039RMET_0038
RLEG216596 PRL110377PRL110378PRL110379PRL110380PRL110381
REUT381666 H16_B0894H16_A2600H16_B0896H16_B0897H16_B0898
REUT264198 REUT_A2289REUT_A2290REUT_A2291REUT_A2292REUT_A2293
RETL347834 RHE_PE00262RHE_PE00263RHE_PE00264RHE_PE00265RHE_PE00266
PSYR223283 PSPTO_2246PSPTO_2245PSPTO_2244PSPTO_2243PSPTO_2242
PSYR205918 PSYR_2051PSYR_2050PSYR_2049PSYR_2048PSYR_2047
PSP312153 PNUC_1666PNUC_1667PNUC_1668PNUC_1669PNUC_1670
PPUT76869 PPUTGB1_3729PPUTGB1_3730PPUTGB1_3731PPUTGB1_3732PPUTGB1_3733
PPUT351746 PPUT_1711PPUT_1710PPUT_1709PPUT_1708PPUT_1707
PPUT160488 PP_4157PP_4158PP_4159PP_4161
PNAP365044 PNAP_3600PNAP_3601PNAP_3602PNAP_3603PNAP_3604
PLUM243265 PLU1416PLU1417PLU1418PLU1419PLU1420
PFLU220664 PFL_4569PFL_4570PFL_4295PFL_4571PFL_4297
PFLU216595 PFLU1680PFLU1679PFLU1678PFLU1677PFLU1676
PFLU205922 PFL_4029PFL_4030PFL_4031PFL_4032PFL_4033
PENT384676 PSEEN3605PSEEN3606PSEEN3607PSEEN3608PSEEN3609
PDIS435591 BDI_3934BDI_3932BDI_3931BDI_3930
PAER208964 PA1637PA1636PA1635PA1634PA1633
PAER208963 PA14_43340PA14_43350PA14_43370PA14_43380PA14_43400
PACN267747 PPA0119PPA0118PPA0117PPA0116PPA0115
OCAR504832 OCAR_4179OCAR_4178OCAR_4177OCAR_4176OCAR_4175
OANT439375 OANT_3780OANT_3779OANT_3778OANT_3777OANT_3776
NSP103690 ALL4503ALL4242ALL3151ALL4245ALL4246
NHAM323097 NHAM_2990NHAM_2991NHAM_2992NHAM_2993NHAM_2994
NFAR247156 NFA15700NFA15690NFA15680NFA15670NFA15660
MXAN246197 MXAN_1349MXAN_0167MXAN_0166MXAN_0165MXAN_0164
MVAN350058 MVAN_4763MVAN_4762MVAN_4761MVAN_4760MVAN_4759
MTUB419947 MRA_1035MRA_1036MRA_1039MRA_1038MRA_1037
MTUB336982 TBFG_11045TBFG_11046TBFG_11049TBFG_11048TBFG_11047
MTBRV RV1027CRV1028CRV1031RV1030RV1029
MTBCDC MT1056MT1057MT1060MT1059MT1058
MSP189918 MKMS_4296MKMS_4295MKMS_4294MKMS_4293MKMS_4292
MSP164757 MJLS_4608MJLS_4607MJLS_4606MJLS_4605MJLS_4604
MSP164756 MMCS_4230MMCS_4229MMCS_4228MMCS_4227MMCS_4226
MSME246196 MSMEG_5396MSMEG_5395MSMEG_5394MSMEG_5393MSMEG_5392
MPET420662 MPE_A2502MPE_A2503MPE_A2505MPE_A2506MPE_A2507
MMAG342108 AMB1913AMB1912AMB1911AMB1910AMB1909
MLOT266835 MLL3126MLL3127MLL3129MLL3130MLL3133
MEXT419610 MEXT_0237MEXT_0236MEXT_0235MEXT_0234MEXT_0233
MCAP243233 MCA_2213MCA_2214MCA_2215MCA_2216MCA_2217
MBOV410289 BCG_1084CBCG_1085CBCG_1089BCG_1088BCG_1087
MBOV233413 MB1055CMB1056CMB1060MB1059MB1058
MAVI243243 MAV_1169MAV_1170MAV_1171MAV_1172MAV_1173
MAER449447 MAE_52640MAE_53250MAE_59870MAE_59820MAE_59800
MABS561007 MAB_3250CMAB_3251CMAB_3252CMAB_3253CMAB_3254C
LWEL386043 LWE2627LWE2628LWE2629LWE2630LWE2631
LSPH444177 BSPH_3683BSPH_3682BSPH_3679BSPH_3680BSPH_3681
LMON265669 LMOF2365_2658LMOF2365_2659LMOF2365_2660LMOF2365_2661LMOF2365_2662
LMON169963 LMO2678LMO2679LMO2680LMO2681LMO2682
LINT267671 LIC_10994LIC_10993LIC_10992LIC_10991LIC_10990
LINT189518 LA3107LA3108LA3109LA3110LA3111
LINN272626 LIN2826LIN2827PLI0055PLI0053LIN2830
KRAD266940 KRAD_1020KRAD_1019KRAD_1018KRAD_1017KRAD_1016
KPNE272620 GKPORF_B5140GKPORF_B5142GKPORF_B5143GKPORF_B5144GKPORF_B5145
JSP375286 MMA_1819MMA_1820MMA_1821MMA_1822MMA_1823
HAUR316274 HAUR_2274HAUR_2273HAUR_2278HAUR_2276HAUR_2275
HARS204773 HEAR1622HEAR1623HEAR1624HEAR1625HEAR1626
GVIO251221 GLR4128GLL0570GLR0575GLR0574GLR0573
GURA351605 GURA_1222GURA_1224GURA_1225GURA_1226GURA_1227
GSUL243231 GSU_2484GSU_2483GSU_2482GSU_2481GSU_2480
GMET269799 GMET_2437GMET_2436GMET_2435GMET_2434GMET_2433
GKAU235909 GK3245GK3246GK3247GK3248
GBET391165 GBCGDNIH1_0186GBCGDNIH1_0185GBCGDNIH1_0184GBCGDNIH1_0183GBCGDNIH1_0182
FTUL418136 FTW_0062FTW_0061FTW_0060FTW_0059
FTUL401614 FTN_1715FTN_1716FTN_1717FTN_1718
FTUL351581 FTL_1879FTL_1880FTL_1881FTL_1883
FSP1855 FRANEAN1_4329FRANEAN1_0599FRANEAN1_0602FRANEAN1_0601FRANEAN1_0600
FSP106370 FRANCCI3_3284FRANCCI3_3283FRANCCI3_3285FRANCCI3_3286FRANCCI3_3287
FPHI484022 FPHI_0888FPHI_0887FPHI_0886FPHI_0885
FJOH376686 FJOH_1971FJOH_1973FJOH_1974FJOH_1975
FALN326424 FRAAL0967FRAAL5304FRAAL5300FRAAL5301FRAAL5302
ESP42895 ENT638_1206ENT638_1207ENT638_1208ENT638_1209ENT638_1210
EFER585054 EFER_2416EFER_2415EFER_2414EFER_2413EFER_2412
EFAE226185 EF_0571EF_0570EF_0569EF_0568EF_0567
ECOO157 KDPEKDPDKDPCKDPBKDPA
ECOL83334 ECS0722ECS0723ECS0724ECS0725ECS0726
ECOL585397 ECED1_0673ECED1_0674ECED1_0675ECED1_0676ECED1_0677
ECOL585057 ECIAI39_0653ECIAI39_0654ECIAI39_0655ECIAI39_0656ECIAI39_0657
ECOL585056 ECUMN_0776ECUMN_0777ECUMN_0778ECUMN_0779ECUMN_0780
ECOL585055 EC55989_0678EC55989_0679EC55989_0680EC55989_0681EC55989_0682
ECOL585035 ECS88_0728ECS88_0729ECS88_0730ECS88_0731ECS88_0732
ECOL585034 ECIAI1_0670ECIAI1_0671ECIAI1_0672ECIAI1_0673ECIAI1_0674
ECOL481805 ECOLC_2962ECOLC_2961ECOLC_2960ECOLC_2959ECOLC_2958
ECOL469008 ECBD_2966ECBD_2965ECBD_2964ECBD_2963ECBD_2962
ECOL439855 ECSMS35_0716ECSMS35_0717ECSMS35_0718ECSMS35_0719ECSMS35_0720
ECOL413997 ECB_00651ECB_00652ECB_00653ECB_00654ECB_00655
ECOL409438 ECSE_0754ECSE_0755ECSE_0756ECSE_0757ECSE_0758
ECOL405955 APECO1_1373APECO1_1372APECO1_1371APECO1_1370APECO1_1369
ECOL364106 UTI89_C0698UTI89_C0699UTI89_C0700UTI89_C0701UTI89_C0702
ECOL362663 ECP_0712ECP_0715ECP_0716ECP_0717
ECOL331111 ECE24377A_0720ECE24377A_0721ECE24377A_0722ECE24377A_0723ECE24377A_0724
ECOL316407 ECK0682:JW5096:B0694ECK0683:JW0683:B0695ECK0684:JW0684:B0696ECK0685:JW0685:B0697ECK0686:JW0686:B0698
ECOL199310 C0779C0780C0781C0782C0783
ECAR218491 ECA1338ECA1339ECA1340ECA1341ECA1342
DVUL882 DVU_3336DVU_3337DVU_3338DVU_3339
DRAD243230 DR_B0088DR_B0087DR_B0083DR_B0086
DGEO319795 DGEO_2844DGEO_2852DGEO_2851DGEO_2849DGEO_2850
DARO159087 DARO_3557DARO_1080DARO_1085DARO_1086DARO_1087
CVIO243365 CV_1595CV_1596CV_1597CV_1598CV_1599
CSP78 CAUL_2694CAUL_4239CAUL_4240CAUL_4241CAUL_4242
CPER195103 CPF_1214CPF_1213CPF_1212CPF_1211CPF_1210
CMIC443906 CMM_2755CMM_2754CMM_2753CMM_2752CMM_2751
CMIC31964 CMS0458CMS0459CMS0460CMS0461CMS0462
CMET456442 MBOO_0896MBOO_0894MBOO_0895MBOO_0894
CKLU431943 CKL_1470CKL_1469CKL_1473CKL_1472CKL_1471
CJEJ407148 C8J_0631C8J_0630C8J_0629C8J_0628
CJEJ354242 CJJ81176_0702CJJ81176_0701CJJ81176_0700CJJ81176_0699
CJEI306537 JK1273JK1272JK1271JK1270JK1269
CHUT269798 CHU_1986CHU_1984CHU_1983CHU_1982
CDIF272563 CD1830CD1829CD1593CD1592CD1591
CBOT508765 CLL_A0982CLL_A0981CLL_A0980CLL_A0979CLL_A0978
CAULO CC1595CC1594CC1593CC1592CC1591
CACE272562 CAC3677CAC3678CAC3680CAC3681CAC3682
BWEI315730 BCERKBAB4_2492BCERKBAB4_0657BCERKBAB4_0656BCERKBAB4_0655BCERKBAB4_0654
BVIE269482 BCEP1808_2369BCEP1808_2370BCEP1808_2371BCEP1808_2372BCEP1808_2373
BTHU412694 BALH_0676BALH_0675BALH_0674BALH_0673
BTHU281309 BT9727_0650BT9727_0649BT9727_0648BT9727_0647
BTHE226186 BT_2421BT_2423BT_2424BT_2425
BTHA271848 BTH_I1025BTH_I1024BTH_I1023BTH_I1022BTH_I1021
BSP376 BRADO5826BRADO5827BRADO5828BRADO5829BRADO5830
BSP36773 BCEP18194_A5611BCEP18194_A5612BCEP18194_A5613BCEP18194_B2381BCEP18194_A5615
BPSE320373 BURPS668_1246BURPS668_1245BURPS668_1243BURPS668_1242BURPS668_1241
BPSE320372 BURPS1710B_A1472BURPS1710B_A1471BURPS1710B_A1469BURPS1710B_A1468BURPS1710B_A1467
BPSE272560 BPSL1175BPSL1174BPSL1173BPSL1172BPSL1171
BPER257313 BP2484BP2483BP2482BP2481BP2480
BPAR257311 BPP3472BPP3471BPP3470BPP3469BPP3468
BMAL320389 BMA10247_0371BMA10247_0370BMA10247_0368BMA10247_0367BMA10247_0366
BMAL320388 BMASAVP1_A1088BMASAVP1_A1087BMASAVP1_A1085BMASAVP1_A1084BMASAVP1_A1083
BMAL243160 BMA_1872BMA_1874BMA_1875BMA_1876
BJAP224911 BLL6775BLL6776BLL6777BLL6778BLL6779
BFRA295405 BF0582BF0580BF0579BF0578
BFRA272559 BF0532BF0530BF0529BF0528
BCER572264 BCA_0806BCA_0805BCA_0804BCA_0803
BCER405917 BCE_0812BCE_0811BCE_0810BCE_0809
BCER315749 BCER98_0627BCER98_0626BCER98_0625BCER98_0624
BCER288681 BCE33L0649BCE33L0648BCE33L0647BCE33L0646
BCER226900 BC_0756BC_0755BC_0754BC_0753
BCEN331272 BCEN2424_2284BCEN2424_2285BCEN2424_2286BCEN2424_2287BCEN2424_2288
BCEN331271 BCEN_1672BCEN_1673BCEN_1674BCEN_1675BCEN_1676
BBRO257310 BB3921BB3920BB3919BB3918BB3917
BBAC264462 BD1759BD1758BD2297BD1757
BANT592021 BAA_0850BAA_0849BAA_0848BAA_0847
BANT568206 BAMEG_3816BAMEG_3817BAMEG_3818BAMEG_3819
BANT261594 GBAA0742GBAA0741GBAA0740GBAA0739
BANT260799 BAS0706BAS0705BAS0704BAS0703
BAMB398577 BAMMC406_2200BAMMC406_2201BAMMC406_2202BAMMC406_2203BAMMC406_2204
BAMB339670 BAMB_2322BAMB_2323BAMB_2324BAMB_2325BAMB_2326
AVAR240292 AVA_3369AVA_B0190AVA_3846AVA_B0206AVA_1195
ASP62977 ACIAD2973ACIAD2975ACIAD2976ACIAD2977ACIAD2978
ASP1667 ARTH_3050ARTH_1878ARTH_1877ARTH_1876ARTH_1875
ASAL382245 ASA_0016ASA_0017ASA_0018ASA_0019ASA_0020
AHYD196024 AHA_0013AHA_0014AHA_0015AHA_0016AHA_0017
AFER243159 AFE_0870AFE_0869AFE_0629AFE_0865AFE_0866
ADEH290397 ADEH_0891ADEH_0892ADEH_0893ADEH_0894ADEH_0895
ACRY349163 ACRY_0714ACRY_0713ACRY_3490ACRY_0709ACRY_3488
ACAU438753 AZC_1569AZC_1568AZC_1567AZC_1566AZC_1565
ABAU360910 BAV2705BAV2704BAV2703BAV2702BAV2701
ABAC204669 ACID345_0509ACID345_0508ACID345_0512ACID345_0511ACID345_0510
AAVE397945 AAVE_0359AAVE_0358AAVE_0357AAVE_0356AAVE_0355


Organism features enriched in list (features available for 211 out of the 223 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00001011517
Arrangment:Pairs 0.001250554112
Disease:Bubonic_plague 0.002146666
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00023971011
Endospores:No 0.000927860211
GC_Content_Range4:0-40 7.778e-946213
GC_Content_Range4:60-100 5.588e-1795145
GC_Content_Range7:0-30 9.363e-7347
GC_Content_Range7:30-40 0.000334743166
GC_Content_Range7:40-50 1.065e-621117
GC_Content_Range7:50-60 0.006727849107
GC_Content_Range7:60-70 1.485e-1385134
GC_Content_Range7:70-100 0.00023971011
Genome_Size_Range5:0-2 7.692e-295155
Genome_Size_Range5:2-4 1.284e-646197
Genome_Size_Range5:4-6 2.809e-21118184
Genome_Size_Range5:6-10 3.859e-154247
Genome_Size_Range9:1-2 6.711e-225128
Genome_Size_Range9:2-3 0.000025725120
Genome_Size_Range9:4-5 2.441e-75796
Genome_Size_Range9:5-6 5.368e-126188
Genome_Size_Range9:6-8 1.338e-133538
Gram_Stain:Gram_Pos 0.005619066150
Habitat:Aquatic 0.00001611691
Habitat:Multiple 9.523e-1199178
Habitat:Specialized 3.517e-6553
Habitat:Terrestrial 0.00215651931
Motility:Yes 0.0000758118267
Optimal_temp.:25-30 1.511e-61719
Optimal_temp.:28-30 0.000762677
Optimal_temp.:30-37 2.422e-71718
Oxygen_Req:Aerobic 0.001590182185
Oxygen_Req:Anaerobic 1.451e-617102
Oxygen_Req:Facultative 0.002634087201
Pathogenic_in:Animal 0.00540063366
Pathogenic_in:No 0.000477264226
Shape:Rod 1.496e-10161347
Shape:Sphere 0.0018723119
Shape:Spiral 0.0091047634
Temp._range:Hyperthermophilic 0.0003495123
Temp._range:Mesophilic 7.497e-12200473
Temp._range:Thermophilic 0.0000185235



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 332
Effective number of orgs (counting one per cluster within 468 clusters): 275

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPET390874 ncbi Thermotoga petrophila RKU-10
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP644076 Silicibacter sp. TrichCH4B1
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSP292414 ncbi Ruegeria sp. TM10400
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F11
SLOI323850 ncbi Shewanella loihica PV-41
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SGOR29390 Streptococcus gordonii Challis0
SFLE198214 ncbi Shigella flexneri 2a str. 3011
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1851
SARE391037 ncbi Salinispora arenicola CNS-2051
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-31
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPRO298386 ncbi Photobacterium profundum SS91
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp1
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96011
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C911
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC11
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM1
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293281
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP216389 ncbi Dehalococcoides sp. BAV11
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1011
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ195099 ncbi Campylobacter jejuni RM12211
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BPET94624 Bordetella petrii1
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BLON206672 ncbi Bifidobacterium longum NCC27051
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233651
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP232721 ncbi Acidovorax sp. JS421
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10517   EG10516   EG10515   EG10514   EG10513   
ZMOB264203
XFAS405440
XFAS183190
XFAS160492
WSUC273121
WPIP955
WPIP80849
VVUL216895
VVUL196600
VPAR223926
VFIS312309
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX1517
TWHI218496
TWHI203267
TTUR377629
TTHE300852 TTHA1720
TTHE262724 TT_C1358
TSP28240
TROS309801 TRD_0632
TPET390874
TPAL243276
TMAR243274
TLET416591
TKOD69014 TK0837
TFUS269800 TFU_2910
TERY203124
TDEN326298 TMDEN_0531
TDEN243275 TDE_0008
TCRU317025
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471 GSYN2743
SSP644076 SCH4B_2130
SSP387093 SUN_0789
SSP321332 CYB_2856
SSP321327 CYA_1033
SSP292414
SSP1131
SSOL273057
SSED425104
SSAP342451
SRUB309807 SRU_1594
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SONE211586 SO_0059
SMUT210007
SMAR399550 SMAR_0590
SLOI323850 SHEW_3818
SHAL458817
SGOR29390
SFLE198214 AAN42240.1
SEPI176280
SDEN318161
SDEG203122
SBAL402882 SHEW185_0051
SARE391037 SARE_2766
SALA317655 SALA_2453
SAGA211110
SAGA208435
SAGA205921
SACI56780 SYN_01290
SACI330779
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RPOM246200 SPO_A0365
RMAS416276
RFEL315456
RDEN375451
RCON272944
RCAS383372 RCAS_4344
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PSTU379731
PSP56811
PSP117
PRUM264731
PPRO298386 PBPRB0327
PPEN278197
PMUL272843
PMOB403833
PMEN399739 PMEN_4184
PMAR93060 P9215_01511
PMAR74547 PMT1994
PMAR74546 PMT9312_0136
PMAR59920
PMAR167555
PMAR167546 P9301ORF_0155
PMAR167542 P9515ORF_0169
PMAR167540 PMM0134
PMAR167539
PMAR146891 A9601_01511
PLUT319225 PLUT_0633
PISL384616
PINT246198
PING357804 PING_2020
PHOR70601
PHAL326442
PGIN242619
PFUR186497 PF0740
PCRY335284
PCAR338963 PCAR_1596
PATL342610
PAST100379
PARS340102
PARC259536 PSYC_1587
PAER178306
PABY272844
OTSU357244
OIHE221109
NWIN323098 NWI_0911
NSP387092
NSEN222891
NPHA348780
NOCE323261 NOC_0205
NMUL323848 NMUL_A2207
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NEUT335283 NEUT_1290
NEUR228410
MTHE349307 MTHE_0905
MTHE264732 MOTH_1994
MTHE187420
MSYN262723
MSUC221988
MSTA339860
MSP400668
MSP266779 MESO_3893
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2328
MMAR444158
MMAR426368
MMAR402880 MMARC5_0290
MMAR394221 MMAR10_0483
MMAR368407
MMAR267377
MLEP272631 ML0174
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_1887
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MBUR259564
MBAR269797 MBAR_A1889
MART243272
MAQU351348 MAQU_0131
MAEO419665
MACE188937 MA1342
LXYL281090
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMES203120
LLAC272623 L0131
LLAC272622 LACR_1701
LJOH257314 LJ_1631
LINT363253
LHEL405566 LHV_1588
LGAS324831 LGAS_1398
LDEL390333 LDB1493
LDEL321956 LBUL_1389
LCAS321967 LSEI_1679
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621 LBA1525
JSP290400
IHOS453591
HWAL362976
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761 HM1_2814
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HDUC233412
HBUT415426
HACI382638
GOXY290633
GFOR411154
FSUC59374
FNUC190304
FNOD381764
FMAG334413 FMG_0605
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DSP216389 DEHABAV1_0235
DPSY177439
DOLE96561
DNOD246195
DETH243164 DET_0135
DDES207559
CVES412965
CTRA471473
CTRA471472
CTEP194439 CT_0815
CSUL444179
CSP501479
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380 CPR_0609
CPER195102 CPE0642
CPEL335992
CNOV386415 NT01CX_2320
CMUR243161
CMAQ397948
CKOR374847
CJEJ360109
CJEJ195099 CJE_0776
CHOM360107
CGLU196627 CG0484
CFET360106
CFEL264202
CEFF196164 CE0425
CDIP257309 DIP0694
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922 COXBU7E912_0477
CBUR360115 COXBURSA331_A1690
CBUR227377 CBU_1507
CBLO291272
CBLO203907
CABO218497
BXEN266265 BXE_B1520
BTUR314724
BTRI382640
BSUI470137 BSUIS_A0220
BSUI204722 BR_0220
BSP107806
BQUI283165
BPUM315750 BPUM_3021
BPET94624 BPET2541
BOVI236 GBOORF0221
BMEL359391
BMEL224914 BMEI1730
BLON206672 BL0316
BLIC279010 BL01899
BHER314723
BHEN283166
BGAR290434
BCLA66692 ABC0224
BCIC186490
BCAN483179 BCAN_A0223
BBUR224326
BBAC360095
BAPH372461
BAPH198804
BAMY326423 RBAM_030680
BAFZ390236
BABO262698 BRUAB1_0215
AYEL322098
AURANTIMONAS
ASP76114
ASP232721 AJS_1372
APLE434271
APLE416269
APHA212042
APER272557
ANAE240017 ANA_1516
AMAR329726 AM1_5262
AMAR234826
ALAI441768
AFUL224325
ABOR393595
AAEO224324


Organism features enriched in list (features available for 311 out of the 332 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0000369117
Arrangment:Pairs 0.000078442112
Disease:Pharyngitis 0.006284488
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0026669111
Disease:Wide_range_of_infections 0.00091531111
Disease:bronchitis_and_pneumonitis 0.006284488
Endospores:No 0.0001317133211
Endospores:Yes 1.452e-61253
GC_Content_Range4:0-40 3.474e-9147213
GC_Content_Range4:40-60 0.0099214131224
GC_Content_Range4:60-100 7.968e-1932145
GC_Content_Range7:0-30 0.00112293547
GC_Content_Range7:30-40 5.967e-6112166
GC_Content_Range7:40-50 7.587e-683117
GC_Content_Range7:60-70 2.457e-1532134
Genome_Size_Range5:0-2 4.354e-30140155
Genome_Size_Range5:2-4 9.771e-6129197
Genome_Size_Range5:4-6 6.425e-2838184
Genome_Size_Range5:6-10 1.653e-11447
Genome_Size_Range9:0-1 2.468e-82727
Genome_Size_Range9:1-2 3.521e-21113128
Genome_Size_Range9:2-3 0.000081482120
Genome_Size_Range9:4-5 1.741e-131996
Genome_Size_Range9:5-6 3.751e-111988
Genome_Size_Range9:6-8 7.289e-11238
Gram_Stain:Gram_Pos 0.000221262150
Habitat:Aquatic 0.00152296191
Habitat:Host-associated 4.762e-6135206
Habitat:Multiple 1.529e-1060178
Habitat:Terrestrial 0.0009909831
Motility:Yes 7.030e-8111267
Optimal_temp.:25-30 0.0000921219
Optimal_temp.:30-37 0.0000177118
Oxygen_Req:Aerobic 0.008148087185
Oxygen_Req:Anaerobic 0.001022568102
Oxygen_Req:Facultative 0.007176095201
Shape:Coccobacillus 0.00909791011
Shape:Coccus 0.00468655482
Shape:Irregular_coccus 0.00029151617
Shape:Rod 8.056e-15140347
Shape:Sphere 0.00008841819
Shape:Spiral 0.00715862534
Temp._range:Hyperthermophilic 0.00051502023
Temp._range:Mesophilic 6.240e-6232473
Temp._range:Psychrophilic 0.003311699



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-981 (taurine degradation IV)106920.4817
IDNCAT-PWY (L-idonate degradation)2461560.4654
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371470.4287
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582190.4178
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651910.4102
GLUCARDEG-PWY (D-glucarate degradation I)1521070.4100
TRESYN-PWY (trehalose biosynthesis I)1711150.4036
PWY-5155 (β-alanine biosynthesis III)3101710.4020



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10516   EG10515   EG10514   EG10513   
EG105170.9998950.9997980.9997550.999757
EG105160.9999130.9998810.999867
EG105150.9999350.999907
EG105140.999941
EG10513



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PAIRWISE BLAST SCORES:

  EG10517   EG10516   EG10515   EG10514   EG10513   
EG105170.0f0----
EG10516-0.0f0---
EG10515--0.0f0--
EG10514---0.0f0-
EG10513----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ATPASE-1-CPLX (potassium ion P-type ATPase transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.600, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9999 0.9998 EG10515 (kdpC) EG10515-MONOMER (KdpC)
   *in cand* 0.9999 0.9998 EG10514 (kdpB) KDPB-MONOMER (KdpB)
   *in cand* 0.9999 0.9998 EG10513 (kdpA) EG10513-MONOMER (KdpA)
                NIL    NIL G0-10439 (kdpF) MONOMER0-12 (KdpF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9999 0.9999 EG10516 (kdpD) PHOSPHO-KDPD (KdpD sensory histidine kinase - phosphorylated)
   *in cand* 0.9998 0.9998 EG10517 (kdpE) PHOSPHO-KDPE (KdpE-Phosphorylated)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10513 EG10514 EG10515 EG10516 EG10517 (centered at EG10515)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10517   EG10516   EG10515   EG10514   EG10513   
278/623270/623236/623311/623235/623
AAUR290340:2:Tyes0--1061-
AAVE397945:0:Tyes43210
ABAC204669:0:Tyes10432
ABAU360910:0:Tyes43210
ABUT367737:0:Tyes01---
ACAU438753:0:Tyes43210
ACEL351607:0:Tyes10---
ACRY349163:5:Tyes--2-0
ACRY349163:8:Tyes54-0-
ADEH290397:0:Tyes01234
AEHR187272:0:Tyes-1466-0-
AFER243159:0:Tyes2322310227228
AHYD196024:0:Tyes01234
AMAR329726:9:Tyes0----
AMET293826:0:Tyes2728-0-
ANAE240017:0:Tyes0----
AORE350688:0:Tyes797796-0-
ASAL382245:5:Tyes01234
ASP1667:3:Tyes11893210
ASP232721:2:Tyes---0-
ASP62928:0:Tyes0294---
ASP62977:0:Tyes01234
AVAR240292:2:Tyes-0-16-
AVAR240292:3:Tyes2179-2658-0
BABO262698:1:Tno---0-
BAMB339670:3:Tno01234
BAMB398577:3:Tno01234
BAMY326423:0:Tyes---0-
BANT260799:0:Tno-3210
BANT261594:2:Tno-3210
BANT568206:2:Tyes-0123
BANT592021:2:Tno-3210
BBAC264462:0:Tyes21-5050
BBRO257310:0:Tyes43210
BCAN483179:1:Tno---0-
BCEN331271:2:Tno01234
BCEN331272:3:Tyes01234
BCER226900:1:Tyes-3210
BCER288681:0:Tno-3210
BCER315749:1:Tyes-3210
BCER405917:1:Tyes-3210
BCER572264:1:Tno-3210
BCLA66692:0:Tyes---0-
BFRA272559:1:Tyes-4210
BFRA295405:0:Tno-4210
BHAL272558:0:Tyes428--0-
BJAP224911:0:Fyes01234
BLIC279010:0:Tyes---0-
BLON206672:0:Tyes0----
BMAL243160:1:Tno0-123
BMAL320388:1:Tno54210
BMAL320389:1:Tyes54210
BMEL224914:1:Tno---0-
BOVI236:1:Tyes---0-
BPAR257311:0:Tno43210
BPER257313:0:Tyes43210
BPET94624:0:Tyes---0-
BPSE272560:1:Tyes43210
BPSE320372:1:Tno54210
BPSE320373:1:Tno54210
BPUM315750:0:Tyes---0-
BSP36773:1:Tyes---0-
BSP36773:2:Tyes012-4
BSP376:0:Tyes01234
BSUB:0:Tyes11420-3276-
BSUI204722:1:Tyes---0-
BSUI470137:1:Tno---0-
BTHA271848:1:Tno43210
BTHE226186:0:Tyes-0234
BTHU281309:1:Tno-3210
BTHU412694:1:Tno-3210
BVIE269482:7:Tyes01234
BWEI315730:4:Tyes17833210
BXEN266265:1:Tyes-0---
CACE272562:1:Tyes01345
CAULO:0:Tyes43210
CBEI290402:0:Tyes10-2715-
CBOT36826:1:Tno0--933-
CBOT441770:0:Tyes0--914-
CBOT441771:0:Tno0--911-
CBOT441772:1:Tno0--938-
CBOT498213:1:Tno930-1016-
CBOT508765:1:Tyes43210
CBOT515621:2:Tyes870-1009-
CBOT536232:0:Tno940-1094-
CBUR227377:1:Tyes---0-
CBUR360115:1:Tno---0-
CBUR434922:2:Tno---0-
CDES477974:0:Tyes0--459-
CDIF272563:1:Tyes243242210
CDIP257309:0:Tyes0----
CEFF196164:0:Fyes0----
CGLU196627:0:Tyes0----
CHUT269798:0:Tyes-4210
CHYD246194:0:Tyes01284-825-
CJAP155077:0:Tyes01-160-
CJEI306537:0:Tyes43210
CJEJ192222:0:Tyes-1-0-
CJEJ195099:0:Tno--0--
CJEJ354242:2:Tyes-3210
CJEJ407148:0:Tno-3210
CKLU431943:1:Tyes10432
CMET456442:0:Tyes-2010
CMIC31964:2:Tyes01234
CMIC443906:2:Tyes43210
CNOV386415:0:Tyes---0-
CPER195102:1:Tyes0----
CPER195103:0:Tno43210
CPER289380:3:Tyes0----
CPHY357809:0:Tyes01-615-
CSP78:2:Tyes01574157515761577
CTEP194439:0:Tyes---0-
CTET212717:0:Tyes235--0-
CVIO243365:0:Tyes01234
DARO159087:0:Tyes24850567
DETH243164:0:Tyes0----
DGEO319795:0:Tyes80132
DHAF138119:0:Tyes12052183-0-
DRAD243230:1:Tyes-5403
DRED349161:0:Tyes-0-1098-
DSHI398580:2:Tyes---0-
DSHI398580:5:Tyes-0---
DSP216389:0:Tyes0----
DSP255470:0:Tno01281---
DVUL882:1:Tyes-0123
ECAR218491:0:Tyes01234
ECOL199310:0:Tno01234
ECOL316407:0:Tno01234
ECOL331111:6:Tno01234
ECOL362663:0:Tno0-123
ECOL364106:1:Tno01234
ECOL405955:2:Tyes01234
ECOL409438:6:Tyes01234
ECOL413997:0:Tno01234
ECOL439855:4:Tno01234
ECOL469008:0:Tno43210
ECOL481805:0:Tno43210
ECOL585034:0:Tno01234
ECOL585035:0:Tno01234
ECOL585055:0:Tno01234
ECOL585056:2:Tno01234
ECOL585057:0:Tno01234
ECOL585397:0:Tno01234
ECOL83334:0:Tno01234
ECOLI:0:Tno01234
ECOO157:0:Tno01234
EFAE226185:3:Tyes43210
EFER585054:1:Tyes43210
ELIT314225:0:Tyes01---
ESP42895:1:Tyes01234
FALN326424:0:Tyes04240423642374238
FJOH376686:0:Tyes-0234
FMAG334413:1:Tyes0----
FPHI484022:1:Tyes-3210
FRANT:0:Tno-012-
FSP106370:0:Tyes10234
FSP1855:0:Tyes36760321
FTUL351581:0:Tno-0124
FTUL393011:0:Tno--0-1
FTUL393115:0:Tyes-012-
FTUL401614:0:Tyes-0123
FTUL418136:0:Tno-3210
FTUL458234:0:Tno--0-1
GBET391165:0:Tyes43210
GKAU235909:1:Tyes-0123
GMET269799:1:Tyes43210
GSUL243231:0:Tyes43210
GTHE420246:1:Tyes01407---
GURA351605:0:Tyes02345
GVIO251221:0:Tyes36030543
HARS204773:0:Tyes01234
HAUR316274:2:Tyes10532
HCHE349521:0:Tyes086-4136-
HHAL349124:0:Tyes-0-866-
HMOD498761:0:Tyes-0---
HSAL478009:3:Tyes--210
HSP64091:1:Tno--210
ILOI283942:0:Tyes13640-926-
JSP375286:0:Tyes01234
KPNE272620:2:Tyes01234
KRAD266940:2:Fyes01234
LACI272621:0:Tyes0----
LCAS321967:1:Tyes0----
LCHO395495:0:Tyes01---
LDEL321956:0:Tyes0----
LDEL390333:0:Tyes0----
LGAS324831:0:Tyes0----
LHEL405566:0:Tyes0----
LINN272626:0:Tno--20-
LINN272626:1:Tno01--4
LINT189518:1:Tyes01234
LINT267671:1:Tno43210
LJOH257314:0:Tyes0----
LLAC272622:5:Tyes0----
LLAC272623:0:Tyes0----
LMON169963:0:Tno01234
LMON265669:0:Tyes01234
LSPH444177:1:Tyes43012
LWEL386043:0:Tyes01234
MABS561007:1:Tyes01234
MACE188937:0:Tyes---0-
MAER449447:0:Tyes062729724722
MAQU351348:2:Tyes---0-
MAVI243243:0:Tyes01234
MBAR269797:1:Tyes---0-
MBOV233413:0:Tno01543
MBOV410289:0:Tno01543
MCAP243233:0:Tyes01234
MEXT419610:0:Tyes43210
MGIL350054:3:Tyes0----
MLEP272631:0:Tyes0----
MLOT266835:2:Tyes01234
MMAG342108:0:Tyes43210
MMAR394221:0:Tyes0----
MMAR402880:1:Tyes-0---
MMAZ192952:0:Tyes---0-
MPET420662:1:Tyes01345
MSME246196:0:Tyes43210
MSP164756:1:Tno43210
MSP164757:0:Tno43210
MSP189918:2:Tyes43210
MSP266779:3:Tyes---0-
MSP409:2:Tyes-30-0-
MTBCDC:0:Tno01432
MTBRV:0:Tno01432
MTHE264732:0:Tyes---0-
MTHE349307:0:Tyes---0-
MTUB336982:0:Tno01432
MTUB419947:0:Tyes01543
MVAN350058:0:Tyes43210
MXAN246197:0:Tyes11503210
NARO279238:0:Tyes01137-1782-
NEUT335283:2:Tyes---0-
NFAR247156:2:Tyes43210
NHAM323097:2:Tyes01234
NMUL323848:3:Tyes-0---
NOCE323261:1:Tyes---0-
NSP103690:6:Tyes13651104011071108
NSP35761:1:Tyes5270---
NWIN323098:0:Tyes---0-
OANT439375:4:Tyes43210
OCAR504832:0:Tyes43210
PACN267747:0:Tyes43210
PAER208963:0:Tyes01234
PAER208964:0:Tno43210
PARC259536:0:Tyes---0-
PCAR338963:0:Tyes---0-
PDIS435591:0:Tyes-4210
PENT384676:0:Tyes01234
PFLU205922:0:Tyes01234
PFLU216595:1:Tyes43210
PFLU220664:0:Tyes26426502662
PFUR186497:0:Tyes---0-
PING357804:0:Tyes---0-
PLUM243265:0:Fyes01234
PLUT319225:0:Tyes-0---
PMAR146891:0:Tyes0----
PMAR167540:0:Tyes0----
PMAR167542:0:Tyes0----
PMAR167546:0:Tyes0----
PMAR74546:0:Tyes0----
PMAR74547:0:Tyes0----
PMAR93060:0:Tyes0----
PMEN399739:0:Tyes-0---
PNAP365044:8:Tyes01234
PPRO298386:1:Tyes0----
PPUT160488:0:Tno012-3
PPUT351746:0:Tyes43210
PPUT76869:0:Tno01234
PSP296591:2:Tyes01---
PSP312153:0:Tyes01234
PSYR205918:0:Tyes43210
PSYR223283:2:Tyes43210
PTHE370438:0:Tyes01411---
PTOR263820:0:Tyes--012
RALB246199:0:Tyes13860-1798-
RCAS383372:0:Tyes0----
RETL347834:3:Tyes01234
REUT264198:3:Tyes01234
REUT381666:1:Tyes0-234
REUT381666:2:Tyes-0---
RFER338969:1:Tyes01---
RLEG216596:4:Tyes01234
RMET266264:2:Tyes43210
RPAL258594:0:Tyes01234
RPAL316055:0:Tyes43210
RPAL316056:0:Tyes01234
RPAL316057:0:Tyes43210
RPAL316058:0:Tyes43210
RPOM246200:0:Tyes---0-
RRUB269796:1:Tyes43210
RSAL288705:0:Tyes76540
RSOL267608:1:Tyes0297296295294
RSP101510:3:Fyes01234
RSP357808:0:Tyes02955---
RSPH272943:4:Tyes43210
RSPH349101:2:Tno43210
RSPH349102:4:Tyes3-201
RSPH349102:5:Tyes-0---
RXYL266117:0:Tyes2837--0-
SACI56780:0:Tyes---0-
SALA317655:1:Tyes---0-
SARE391037:0:Tyes0----
SAUR158878:1:Tno02072206932
SAUR158879:1:Tno01947194419452
SAUR196620:0:Tno-3012
SAUR273036:0:Tno-3012
SAUR282458:0:Tno02076207332
SAUR282459:0:Tno-3012
SAUR359786:1:Tno02097420952
SAUR359787:1:Tno02058420562
SAUR367830:3:Tno-3012
SAUR418127:0:Tyes02061205832
SAUR426430:0:Tno-3012
SAUR93061:0:Fno-4012
SAUR93062:1:Tno-4012
SAVE227882:1:Fyes14831484012
SBAL399599:3:Tyes01---
SBAL402882:1:Tno0----
SBOY300268:1:Tyes01-23
SCO:2:Fyes21842183012
SDYS300267:1:Tyes0-1--
SELO269084:0:Tyes-0575859
SENT209261:0:Tno43210
SENT220341:0:Tno01234
SENT295319:0:Tno43210
SENT321314:2:Tno01234
SENT454169:2:Tno01234
SEPI176279:1:Tyes54012
SERY405948:0:Tyes01234
SFLE198214:0:Tyes----0
SFLE373384:0:Tno2-1-0
SFUM335543:0:Tyes-0123
SGLO343509:3:Tyes1-0--
SHAE279808:0:Tyes01432
SHIGELLA:0:Tno--1-0
SLAC55218:0:Fyes---0-
SLAC55218:1:Fyes-0---
SLOI323850:0:Tyes---0-
SMAR399550:0:Tyes---0-
SMED366394:1:Tyes43210
SMEL266834:0:Tyes01234
SONE211586:1:Tyes0----
SPRO399741:1:Tyes01234
SRUB309807:1:Tyes---0-
SSON300269:1:Tyes01234
SSP1148:0:Tyes10764310
SSP321327:0:Tyes0----
SSP321332:0:Tyes0----
SSP387093:0:Tyes---0-
SSP644076:7:Fyes-0---
SSP64471:0:Tyes0----
SSP94122:0:Tyes---0-
SSP94122:1:Tyes0----
STHE292459:0:Tyes26420-1921-
STRO369723:0:Tyes2104--0-
STYP99287:1:Tyes01234
TACI273075:0:Tyes--012
TDEN243275:0:Tyes---0-
TDEN292415:0:Tyes0--1958-
TDEN326298:0:Tyes0----
TELO197221:0:Tyes5740---
TFUS269800:0:Tyes0----
TKOD69014:0:Tyes---0-
TPEN368408:1:Tyes---10
TPSE340099:0:Tyes531211-0-
TROS309801:1:Tyes0----
TSP1755:0:Tyes1191--0-
TTEN273068:0:Tyes0493364365366
TTHE262724:1:Tyes---0-
TTHE300852:2:Tyes---0-
TVOL273116:0:Tyes--210
UMET351160:0:Tyes---0-
VCHO:1:Fyes10---
VCHO345073:0:Tno10---
XAUT78245:1:Tyes01235
XAXO190486:0:Tyes43210
XCAM190485:0:Tyes43210
XCAM314565:0:Tno01234
XCAM316273:0:Tno43210
XCAM487884:0:Tno01234
XORY291331:0:Tno01234
XORY342109:0:Tyes01234
XORY360094:0:Tno86420
YENT393305:1:Tyes43210
YPES187410:5:Tno01234
YPES214092:3:Tno01234
YPES349746:2:Tno01234
YPES360102:3:Tyes01234
YPES377628:2:Tno01234
YPES386656:2:Tno3-210
YPSE273123:2:Tno43210
YPSE349747:2:Tno01246



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