CANDIDATE ID: 226

CANDIDATE ID: 226

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9976320e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11406 (ribC) (b1662)
   Products of gene:
     - RIBOFLAVIN-SYN-MONOMER (RibC)
     - CPLX0-3952 (riboflavin synthase)
       Reactions:
        2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H+  ->  5-amino-6-(D-ribitylamino)uracil + riboflavin
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)

- EG11331 (ribA) (b1277)
   Products of gene:
     - GTP-CYCLOHYDRO-II-MONOMER (GTP cyclohydrolase II)
     - GTP-CYCLOHYDRO-II-CPLX (GTP cyclohydrolase II)
       Reactions:
        GTP + 3 H2O  ->  diphosphate + 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + formate + 2 H+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6168 (PWY-6168)

- EG11322 (ribE) (b0415)
   Products of gene:
     - LUMAZINESYN-MONOMER (RibE)
     - LUMAZINESYN-CPLX (6,7-dimethyl-8-ribityllumazine synthase)
       Reactions:
        5-amino-6-(D-ribitylamino)uracil + 1-deoxy-L-glycero-tetrulose 4-phosphate  ->  6,7-dimethyl-8-(1-D-ribityl)lumazine + phosphate + 2 H2O + H+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)

- EG11321 (ribD) (b0414)
   Products of gene:
     - RIBOFLAVINSYNDEAM-MONOMER (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
     - CPLX0-7659 (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
       Reactions:
        2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O  ->  5-amino-6-(5'-phosphoribosylamino)uracil + ammonia
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
        5-amino-6-(5'-phosphoribosylamino)uracil + NADPH + H+  ->  5-amino-6-(5-phospho-D-ribosylamino)uracil + NADP+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))

- EG10465 (ribB) (b3041)
   Products of gene:
     - DIOHBUTANONEPSYN-MONOMER (3,4-dihydroxy-2-butanone 4-phosphate synthase)
     - DIOHBUTANONEPSYN-CPLX (3,4-dihydroxy-2-butanone 4-phosphate synthase)
       Reactions:
        D-ribulose-5-phosphate  ->  1-deoxy-L-glycero-tetrulose 4-phosphate + formate + H+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 335
Effective number of orgs (counting one per cluster within 468 clusters): 239

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTHE300852 ncbi Thermus thermophilus HB84
TTHE262724 ncbi Thermus thermophilus HB274
TSP1755 Thermoanaerobacter sp.5
TROS309801 ncbi Thermomicrobium roseum DSM 51594
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TKOD69014 ncbi Thermococcus kodakarensis KOD14
TERY203124 ncbi Trichodesmium erythraeum IMS1014
TELO197221 ncbi Thermosynechococcus elongatus BP-14
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STRO369723 ncbi Salinispora tropica CNB-4404
SSP94122 ncbi Shewanella sp. ANA-35
SSP84588 ncbi Synechococcus sp. WH 81024
SSP64471 ncbi Synechococcus sp. CC93114
SSP644076 Silicibacter sp. TrichCH4B4
SSP292414 ncbi Ruegeria sp. TM10404
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SRUB309807 ncbi Salinibacter ruber DSM 138554
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705854
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-64
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-144
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE170187 ncbi Streptococcus pneumoniae G544
SPNE1313 Streptococcus pneumoniae4
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SARE391037 ncbi Salinispora arenicola CNS-2054
SACI56780 ncbi Syntrophus aciditrophicus SB5
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSP101510 ncbi Rhodococcus jostii RHA14
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RMET266264 ncbi Ralstonia metallidurans CH344
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PRUM264731 ncbi Prevotella ruminicola 234
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PMAR93060 ncbi Prochlorococcus marinus MIT 92155
PMAR74547 ncbi Prochlorococcus marinus MIT 93134
PMAR74546 ncbi Prochlorococcus marinus MIT 93125
PMAR59920 ncbi Prochlorococcus marinus NATL2A4
PMAR167555 ncbi Prochlorococcus marinus NATL1A4
PMAR167546 ncbi Prochlorococcus marinus MIT 93015
PMAR167542 ncbi Prochlorococcus marinus MIT 95155
PMAR167540 Prochlorococcus marinus pastoris MED4ax5
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13754
PMAR146891 ncbi Prochlorococcus marinus AS96015
PLUT319225 ncbi Chlorobium luteolum DSM 2735
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFUR186497 ncbi Pyrococcus furiosus DSM 36384
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PDIS435591 ncbi Parabacteroides distasonis ATCC 85034
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
PACN267747 ncbi Propionibacterium acnes KPA1712024
NSP35761 Nocardioides sp.5
NSP103690 ncbi Nostoc sp. PCC 71204
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NFAR247156 ncbi Nocardia farcinica IFM 101524
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MXAN246197 ncbi Myxococcus xanthus DK 16225
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-14
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
MFLA265072 ncbi Methylobacillus flagellatus KT5
MCAP243233 ncbi Methylococcus capsulatus Bath5
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P24
MBOV233413 ncbi Mycobacterium bovis AF2122/974
MAVI243243 ncbi Mycobacterium avium 1044
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8434
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP4
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FSP1855 Frankia sp. EAN1pec4
FSP106370 ncbi Frankia sp. CcI34
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255864
FALN326424 ncbi Frankia alni ACN14a4
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough5
DSP255470 ncbi Dehalococcoides sp. CBDB15
DSP216389 ncbi Dehalococcoides sp. BAV15
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-15
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DETH243164 ncbi Dehalococcoides ethenogenes 1955
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G205
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA4
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis4
CTRA471472 ncbi Chlamydia trachomatis 434/Bu4
CTET212717 ncbi Clostridium tetani E885
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE255
CPNE182082 ncbi Chlamydophila pneumoniae TW-1834
CPNE138677 ncbi Chlamydophila pneumoniae J1384
CPNE115713 ncbi Chlamydophila pneumoniae CWL0294
CPNE115711 ncbi Chlamydophila pneumoniae AR394
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT5
CMUR243161 ncbi Chlamydia muridarum Nigg4
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3824
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130324
CFEL264202 ncbi Chlamydophila felis Fe/C-564
CEFF196164 ncbi Corynebacterium efficiens YS-3144
CDIF272563 ncbi Clostridium difficile 6304
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CCHL340177 ncbi Chlorobium chlorochromatii CaD35
CCAV227941 ncbi Chlamydophila caviae GPIC5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBLO203907 ncbi Candidatus Blochmannia floridanus5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
CABO218497 ncbi Chlamydophila abortus S26/34
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54824
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUB ncbi Bacillus subtilis subtilis 1684
BSP36773 Burkholderia sp.5
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I4
BPAR257311 ncbi Bordetella parapertussis 128224
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K165
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BBRO257310 ncbi Bordetella bronchiseptica RB504
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)5
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP15
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
ANAE240017 Actinomyces oris MG14
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACEL351607 ncbi Acidothermus cellulolyticus 11B4
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF55


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11331   EG11322   EG11321   EG10465   
YPSE349747 YPSIP31758_1751YPSIP31758_1919YPSIP31758_3116YPSIP31758_3117YPSIP31758_0567
YPSE273123 YPTB2304YPTB2144YPTB0935YPTB0934YPTB3404
YPES386656 YPDSF_0756YPDSF_0912YPDSF_2817YPDSF_2818YPDSF_0441
YPES377628 YPN_1845YPN_1690YPN_0906YPN_0905YPN_0517
YPES360102 YPA_1736YPA_1581YPA_2676YPA_2677YPA_3133
YPES349746 YPANGOLA_A2577YPANGOLA_A2231YPANGOLA_A3164YPANGOLA_A3163YPANGOLA_A0289
YPES214092 YPO2391YPO2222YPO3182YPO3183YPO0658
YPES187410 Y1946Y2064Y1001Y1000Y3520
YENT393305 YE2162YE1965YE3160YE3161YE3669
XORY360094 XOOORF_1046XOOORF_1048XOOORF_1043XOOORF_1047
XORY342109 XOO3633XOO3631XOO3635XOO3632
XORY291331 XOO3854XOO3852XOO3856XOO3853
XFAS405440 XFASM12_1907XFASM12_1905XFASM12_1908XFASM12_1906
XFAS183190 PD_1746PD_1744PD_1747PD_1745
XFAS160492 XF0952XF0954XF0950XF0953
XCAM487884 XCC-B100_3660XCC-B100_3658XCC-B100_3664XCC-B100_3659
XCAM316273 XCAORF_0859XCAORF_0861XCAORF_0857XCAORF_0860
XCAM314565 XC_3539XC_3537XC_3541XC_3538
XCAM190485 XCC0695XCC0697XCC0693XCC0696
XAXO190486 XAC0748XAC0750XAC0746XAC0749
VVUL216895 VV1_2560VV2_1180VV1_0319VV1_0323VV2_1426
VVUL196600 VV1729VVA0006VV0864VV0861VVA0260
VPAR223926 VP1480VPA0006VP0682VP0679VPA1250
VFIS312309 VF1414VF1189VF0703VF0700VF0702
VEIS391735 VEIS_4434VEIS_4792VEIS_2821VEIS_4791
VCHO345073 VC0395_A1860VC0395_A0882VC0395_A1858VC0395_A1861VC0395_0181
VCHO VC2270VC1263VC2268VC2271VCA1060
TTUR377629 TERTU_3703TERTU_3696TERTU_3701TERTU_3704TERTU_3702
TTHE300852 TTHA1063TTHA1062TTHA0336TTHA1064
TTHE262724 TT_C0698TT_C0697TT_C1647TT_C0699
TSP1755 TETH514_0021TETH514_0022TETH514_0023TETH514_0020TETH514_0022
TROS309801 TRD_0503TRD_0504TRD_0505TRD_0502
TPSE340099 TETH39_0022TETH39_0023TETH39_0024TETH39_0021TETH39_0023
TKOD69014 TK0425TK0428TK0429TK0424
TERY203124 TERY_4462TERY_1435TERY_1661TERY_4462
TELO197221 TLR1727TLR0067TLR2152TLR1727
TCRU317025 TCR_1399TCR_1397TCR_1400TCR_1398
SWOL335541 SWOL_1221SWOL_1220SWOL_1219SWOL_1222SWOL_1220
STYP99287 STM1426STM1711STM0417STM0416STM3195
STRO369723 STROP_1875STROP_1877STROP_1874STROP_1877
SSP94122 SHEWANA3_2040SHEWANA3_2600SHEWANA3_1099SHEWANA3_1096SHEWANA3_0134
SSP84588 SYNW1263OR0219SYNW0082OR1165SYNW1590OR3106SYNW1263OR0219
SSP64471 GSYN1487GSYN0089GSYN0871GSYN1487
SSP644076 SCH4B_1558SCH4B_3425SCH4B_1553SCH4B_1561
SSP292414 TM1040_2131TM1040_0050TM1040_2135TM1040_2129
SSP1148 SLL1894SLL1282SLR0066SLL1894
SSON300269 SSO_1494SSO_1863SSO_0392SSO_0391SSO_3178
SSED425104 SSED_2118SSED_1603SSED_1276SSED_1273SSED_4372
SRUB309807 SRU_1510SRU_1068SRU_2302SRU_0012
SPRO399741 SPRO_2190SPRO_2653SPRO_1073SPRO_1072SPRO_4286
SPNE488221 SP70585_0240SP70585_0239SP70585_0238SP70585_0241
SPNE487214 SPH_0280SPH_0279SPH_0278SPH_0281
SPNE487213 SPT_0214SPT_0213SPT_0212SPT_0215
SPNE171101 SPR0163SPR0162SPR0161SPR0164
SPNE170187 SPN08034SPN08033SPN08032SPN08035
SPNE1313 SPJ_0194SPJ_0193SPJ_0192SPJ_0195
SPEA398579 SPEA_2267SPEA_2616SPEA_1165SPEA_1162SPEA_0131
SONE211586 SO_2296SO_2831SO_3466SO_3469SO_0142
SLOI323850 SHEW_2036SHEW_2446SHEW_1190SHEW_1187SHEW_0040
SLAC55218 SL1157_3255SL1157_1448SL1157_3259SL1157_3254
SHIGELLA RIBERIBARIBHRIBDRIBB
SHAL458817 SHAL_2017SHAL_2689SHAL_1208SHAL_1205SHAL_4187
SGLO343509 SG1439SG1410SG0652SG0651SG0263
SFUM335543 SFUM_1379SFUM_1380SFUM_1381SFUM_1378SFUM_1380
SFLE373384 SFV_1684SFV_1290SFV_0380SFV_0379SFV_3085
SFLE198214 AAN43269.1AAN42893.1AAN42010.1AAN42009.1AAN44559.1
SERY405948 SACE_2122SACE_2123SACE_2124SACE_2887SACE_2123
SENT454169 SEHA_C1559SEHA_C1898SEHA_C0519SEHA_C0518SEHA_C3446
SENT321314 SCH_1445SCH_1706SCH_0458SCH_0457SCH_3141
SENT295319 SPA1427SPA1165SPA2306SPA2307SPA3063
SENT220341 STY1696STY1340STY0456STY0455STY3373
SENT209261 T1294T1624T2446T2447T3115
SELO269084 SYC0082_CSYC0124_DSYC1854_DSYC1308_DSYC0124_D
SDYS300267 SDY_1888SDY_1353SDY_0319SDY_0320SDY_3226
SDEN318161 SDEN_1703SDEN_1447SDEN_1147SDEN_1144SDEN_1146
SDEG203122 SDE_3457SDE_3450SDE_3455SDE_3458SDE_3456
SCO SCO1443SCO1441SCO1440SCO2688SCO1441
SBOY300268 SBO_1469SBO_1787SBO_0309SBO_0308SBO_2899
SBAL402882 SHEW185_2225SHEW185_1653SHEW185_3155SHEW185_3159SHEW185_0134
SBAL399599 SBAL195_2333SBAL195_1690SBAL195_3300SBAL195_3303SBAL195_0139
SAVE227882 SAV6902SAV6904SAV6905SAV6904
SARE391037 SARE_1868SARE_1870SARE_1867SARE_1870
SACI56780 SYN_02370SYN_02371SYN_02372SYN_00578SYN_02371
RXYL266117 RXYL_1365RXYL_1366RXYL_1367RXYL_1364RXYL_1366
RSPH349102 RSPH17025_0417RSPH17025_3129RSPH17025_0844RSPH17025_0420
RSPH349101 RSPH17029_2417RSPH17029_2504RSPH17029_2046RSPH17029_2414
RSPH272943 RSP_0758RSP_0846RSP_0393RSP_0757
RSP101510 RHA1_RO07169RHA1_RO07170RHA1_RO07171RHA1_RO07168
RRUB269796 RRU_A1824RRU_A3637RRU_A1825RRU_A2197
RPOM246200 SPO_1759SPO_3427SPO_1754SPO_1761
RMET266264 RMET_0194RMET_2694RMET_2688RMET_4758
REUT381666 H16_B1576H16_A2855H16_A2848H16_B1223
REUT264198 REUT_B4241REUT_A0769REUT_A0776REUT_B4029
RDEN375451 RD1_1800RD1_0043RD1_1799RD1_1801
PTHE370438 PTH_1760PTH_1759PTH_1758PTH_1761PTH_1759
PSYR223283 PSPTO_0691PSPTO_0696PSPTO_0693PSPTO_0690PSPTO_0692
PSYR205918 PSYR_4461PSYR_4456PSYR_4459PSYR_4462PSYR_4460
PSTU379731 PST_0836PST_0843PST_0838PST_0835PST_0837
PSP56811 PSYCPRWF_2384PSYCPRWF_0410PSYCPRWF_2285PSYCPRWF_2385PSYCPRWF_0256
PSP312153 PNUC_0271PNUC_0265PNUC_0270PNUC_0266
PRUM264731 GFRORF1369GFRORF1913GFRORF0203GFRORF1913
PPUT76869 PPUTGB1_2867PPUTGB1_0568PPUTGB1_0563PPUTGB1_0560PPUTGB1_0575
PPUT351746 PPUT_2775PPUT_0557PPUT_0552PPUT_0549PPUT_0564
PPUT160488 PP_2916PP_0522PP_0517PP_0514PP_0530
PPRO298386 PBPRA2176PBPRB1461PBPRA0800PBPRA0797PBPRB0898
PMUL272843 PM0650PM0677PM0731PM0749PM1385
PMEN399739 PMEN_3856PMEN_3848PMEN_3854PMEN_3857PMEN_3855
PMAR93060 P9215_05211P9215_09991P9215_19161P9215_14901P9215_09991
PMAR74547 PMT0708PMT0081PMT0375PMT0708
PMAR74546 PMT9312_0441PMT9312_0907PMT9312_1735PMT9312_1359PMT9312_0907
PMAR59920 PMN2A_0317PMN2A_1241PMN2A_0831PMN2A_0317
PMAR167555 NATL1_09901NATL1_21111NATL1_16841NATL1_09901
PMAR167546 P9301ORF_0477P9301ORF_0984P9301ORF_1873P9301ORF_1474P9301ORF_0984
PMAR167542 P9515ORF_0539P9515ORF_1023P9515ORF_1915P9515ORF_1489P9515ORF_1023
PMAR167540 PMM0442PMM0893PMM1643PMM1265PMM0893
PMAR167539 PRO_0943PRO_1803PRO_1339PRO_0943
PMAR146891 A9601_04971A9601_09681A9601_18521A9601_14641A9601_09681
PLUT319225 PLUT_0731PLUT_1591PLUT_1989PLUT_0727PLUT_1591
PLUM243265 PLU2610PLU2431PLU3898PLU3899PLU3963
PING357804 PING_3144PING_1443PING_1440PING_1442
PHAL326442 PSHAA1734PSHAA2371PSHAA2374PSHAA1233
PFUR186497 PF0061PF0064PF0063PF0062
PFLU220664 PFL_5521PFL_5514PFL_5519PFL_5522PFL_5520
PFLU216595 PFLU5472PFLU5466PFLU5470PFLU5473PFLU5471
PFLU205922 PFL_5018PFL_5011PFL_5016PFL_5019PFL_5017
PENT384676 PSEEN0589PSEEN0596PSEEN0591PSEEN0588PSEEN0609
PDIS435591 BDI_3492BDI_0200BDI_3695BDI_3492
PCRY335284 PCRYO_2469PCRYO_0244PCRYO_2392PCRYO_2470PCRYO_0102
PCAR338963 PCAR_1446PCAR_1447PCAR_1448PCAR_1445PCAR_0884
PATL342610 PATL_1312PATL_3961PATL_1314PATL_1311PATL_1313
PARC259536 PSYC_2140PSYC_0220PSYC_2069PSYC_2141PSYC_0093
PAER208964 PA4055PA4047PA4053PA4056PA4054
PAER208963 PA14_11410PA14_11510PA14_11430PA14_11400PA14_11420
PACN267747 PPA1751PPA1750PPA1749PPA1752
NSP35761 NOCA_2448NOCA_2449NOCA_2450NOCA_2447NOCA_2449
NSP103690 ALL3536ALR3993ALL0082ALL3536
NOCE323261 NOC_2024NOC_0802NOC_2025NOC_2023
NMUL323848 NMUL_A0009NMUL_A0011NMUL_A0006NMUL_A0010
NMEN374833 NMCC_1128NMCC_1137NMCC_0641NMCC_0411NMCC_1139
NMEN272831 NMC1148NMC1155NMC0635NMC0403NMC1157
NMEN122587 NMA1416NMA1425NMA0886NMA0644NMA1429
NMEN122586 NMB_1247NMB_1254NMB_0684NMB_1817NMB_1256
NGON242231 NGO0755NGO1134NGO0257NGO0089NGO0704
NFAR247156 NFA36010NFA36000NFA35990NFA36000
NEUR228410 NE2555NE2557NE0793NE2556
MXAN246197 MXAN_4763MXAN_4213MXAN_4762MXAN_4764MXAN_3410
MVAN350058 MVAN_2693MVAN_2694MVAN_2695MVAN_2690
MTHE264732 MOTH_0916MOTH_0917MOTH_0918MOTH_0915MOTH_0917
MSUC221988 MS1313MS1533MS0976MS1374MS0172
MGIL350054 MFLV_3721MFLV_3719MFLV_3718MFLV_3727
MFLA265072 MFLA_2097MFLA_1358MFLA_0492MFLA_1915MFLA_2098
MCAP243233 MCA_1865MCA_2476MCA_1655MCA_1658MCA_1656
MBOV410289 BCG_1473BCG_1476BCG_1477BCG_1470
MBOV233413 MB1447MB1450MB1451MB1444
MAVI243243 MAV_3366MAV_3365MAV_3364MAV_3368
MAQU351348 MAQU_1940MAQU_2439MAQU_0845MAQU_0843MAQU_0844
MAER449447 MAE_24490MAE_32220MAE_40000MAE_24490
LPNE400673 LPC_0645LPC_0646LPC_0647LPC_0646
LPNE297246 LPP1181LPP1182LPP1183LPP1182
LPNE297245 LPL1187LPL1188LPL1189LPL1188
LPNE272624 LPG1178LPG1179LPG1180LPG1179
LLAC272623 L0164L0165L0166L0163
LCHO395495 LCHO_2113LCHO_2489LCHO_2934LCHO_0855
KPNE272620 GKPORF_B1099GKPORF_B0294GKPORF_B4695GKPORF_B4694GKPORF_B2786
JSP375286 MMA_0548MMA_2339MMA_2434MMA_2340
JSP290400 JANN_3417JANN_0416JANN_3421JANN_3414
ILOI283942 IL1402IL2142IL1870IL1869
HSOM228400 HSM_1281HSM_1520HSM_1299HSM_1534HSM_1983
HSOM205914 HS_0812HS_1043HS_0830HS_1050HS_0089
HMOD498761 HM1_2142HM1_2143HM1_2144HM1_2141HM1_2143
HINF71421 HI_1613HI_0212HI_1303HI_0944HI_0764
HINF374930 CGSHIEE_05720CGSHIEE_02170CGSHIEE_05160CGSHIEE_07245CGSHIEE_08270
HINF281310 NTHI1429NTHI0309NTHI1616NTHI1115NTHI0925
HHAL349124 HHAL_0899HHAL_0897HHAL_0900HHAL_0898
HDUC233412 HD_1162HD_1163HD_1165HD_1161
HCHE349521 HCH_02673HCH_05867HCH_05954HCH_05957HCH_01388
HAUR316274 HAUR_1304HAUR_1306HAUR_1586HAUR_2423HAUR_1306
HARS204773 HEAR0565HEAR1037HEAR2372HEAR1036
GVIO251221 GLR0988GLR1042GLL1250GLR0988
GURA351605 GURA_2182GURA_2181GURA_2180GURA_2183GURA_2181
GTHE420246 GTNG_2223GTNG_2222GTNG_2225GTNG_2223
GSUL243231 GSU_1689GSU_1690GSU_1691GSU_1688GSU_1690
GMET269799 GMET_1625GMET_1626GMET_1627GMET_1624GMET_1626
GKAU235909 GK2296GK2295GK2294GK2297GK2295
FTUL458234 FTA_0085FTA_0083FTA_0086FTA_0084
FTUL418136 FTW_1945FTW_1943FTW_1946FTW_1944
FTUL401614 FTN_0113FTN_0111FTN_0114FTN_0112
FTUL393115 FTF1672FTF1674FTF1671FTF1673
FTUL393011 FTH_0073FTH_0071FTH_0074FTH_0072
FTUL351581 FTL_0077FTL_0075FTL_0078FTL_0076
FSP1855 FRANEAN1_1723FRANEAN1_1724FRANEAN1_1725FRANEAN1_1724
FSP106370 FRANCCI3_3187FRANCCI3_3186FRANCCI3_3185FRANCCI3_3186
FRANT RIBBRIBHRIBDRIBA
FPHI484022 FPHI_0714FPHI_0716FPHI_0713FPHI_0715
FNUC190304 FN1507FN1508FN1505FN1506
FALN326424 FRAAL5221FRAAL5220FRAAL5219FRAAL5220
ESP42895 ENT638_1784ENT638_2191ENT638_0883ENT638_0882ENT638_3453
EFER585054 EFER_1382EFER_1677EFER_2610EFER_2611EFER_2990
ECOO157 RIBERIBAZ0516RIBDRIBB
ECOL83334 ECS2371ECS1850ECS0468ECS0467ECS3929
ECOL585397 ECED1_1861ECED1_1487ECED1_0438ECED1_0437ECED1_3715
ECOL585057 ECIAI39_1394ECIAI39_1618ECIAI39_0261ECIAI39_0262ECIAI39_3538
ECOL585056 ECUMN_1952ECUMN_1579ECUMN_0453ECUMN_0452ECUMN_3529
ECOL585055 EC55989_1830EC55989_1438EC55989_0425EC55989_0424EC55989_3457
ECOL585035 ECS88_1711ECS88_1417ECS88_0410ECS88_0409ECS88_3444
ECOL585034 ECIAI1_1714ECIAI1_1300ECIAI1_0415ECIAI1_0414ECIAI1_3189
ECOL481805 ECOLC_1967ECOLC_2349ECOLC_3218ECOLC_3219ECOLC_0656
ECOL469008 ECBD_1981ECBD_2342ECBD_3246ECBD_3247ECBD_0698
ECOL439855 ECSMS35_1535ECSMS35_1852ECSMS35_0451ECSMS35_0450ECSMS35_3339
ECOL413997 ECB_01633ECB_01254ECB_00363ECB_00362ECB_02913
ECOL409438 ECSE_1786ECSE_1327ECSE_0437ECSE_0436ECSE_3322
ECOL405955 APECO1_742APECO1_437APECO1_1595APECO1_1596APECO1_3366
ECOL364106 UTI89_C1853UTI89_C1548UTI89_C0437UTI89_C0436UTI89_C3483
ECOL362663 ECP_1609ECP_1330ECP_0474ECP_0473ECP_3136
ECOL331111 ECE24377A_1876ECE24377A_1479ECE24377A_0446ECE24377A_0445ECE24377A_3506
ECOL316407 ECK1658:JW1654:B1662ECK1272:JW1269:B1277ECK0409:JW0405:B0415ECK0408:JW0404:B0414ECK3032:JW3009:B3041
ECOL199310 C2056C1746C0525C0524C3795
ECAR218491 ECA1923ECA1943ECA1127ECA1126ECA0899
DVUL882 DVU_1200DVU_1199DVU_1198DVU_1201DVU_1775
DSP255470 CBDBA1104CBDBA1103CBDBA1102CBDBA1105CBDBA1103
DSP216389 DEHABAV1_1000DEHABAV1_0999DEHABAV1_0998DEHABAV1_1001DEHABAV1_0999
DSHI398580 DSHI_2252DSHI_0039DSHI_2256DSHI_2251
DRED349161 DRED_2092DRED_2091DRED_2090DRED_2093DRED_0778
DPSY177439 DP1099DP1100DP1101DP2785DP0701
DOLE96561 DOLE_2078DOLE_2077DOLE_2076DOLE_2079DOLE_2077
DNOD246195 DNO_0473DNO_0471DNO_0474DNO_0472
DHAF138119 DSY1663DSY1664DSY1665DSY1662DSY1664
DETH243164 DET_1189DET_1188DET_1187DET_1190DET_1188
DDES207559 DDE_2435DDE_2436DDE_2437DDE_2434DDE_1050
DARO159087 DARO_4095DARO_3738DARO_0605DARO_3737
CVIO243365 CV_2387CV_2005CV_2390CV_1290CV_4216
CVES412965 COSY_0462COSY_0464COSY_0726COSY_0463
CTRA471473 CTLON_0658CTLON_0100CTLON_0101CTLON_0099
CTRA471472 CTL0662CTL0100CTL0101CTL0099
CTET212717 CTC_00672CTC_00673CTC_00674CTC_00671CTC_00673
CTEP194439 CT_1591CT_2037CT_0747CT_1591
CSP501479 CSE45_0336CSE45_4129CSE45_4000CSE45_3833
CSAL290398 CSAL_2099CSAL_0115CSAL_2583CSAL_2585CSAL_2584
CRUT413404 RMAG_0504RMAG_0506RMAG_0800RMAG_0505
CPRO264201 PC0891PC0890PC0889PC1042PC0890
CPNE182082 CPB0553CPB0901CPB0900CPB0901
CPNE138677 CPJ0532CPJ0872CPJ0871CPJ0872
CPNE115713 CPN0532CPN0872CPN0871CPN0872
CPNE115711 CP_0220CP_0997CP_0998CP_0997
CPER289380 CPR_0531CPR_0532CPR_0533CPR_0530
CPER195103 CPF_0547CPF_0548CPF_0549CPF_0546
CPER195102 CPE0567CPE0568CPE0569CPE0566
CNOV386415 NT01CX_0714NT01CX_0713NT01CX_0712NT01CX_0715NT01CX_0713
CMUR243161 TC_0685TC_0104TC_0105TC_0103
CMIC443906 CMM_0962CMM_0961CMM_0960CMM_0963
CKLU431943 CKL_2168CKL_2167CKL_2166CKL_2169
CJAP155077 CJA_2696CJA_2689CJA_2694CJA_2698CJA_2695
CHYD246194 CHY_1474CHY_1473CHY_1472CHY_1475CHY_1473
CGLU196627 CG1799CG1798CG1797CG1800
CFEL264202 CF0794CF0119CF0118CF0119
CEFF196164 CE1715CE1714CE1713CE1716
CDIF272563 CD1699CD1698CD1697CD1700
CDES477974 DAUD_0624DAUD_0625DAUD_0626DAUD_0623DAUD_0625
CCHL340177 CAG_0625CAG_1788CAG_0132CAG_0623CAG_1788
CCAV227941 CCA_00213CCA_00895CCA_00894CCA_00896CCA_00895
CBUR434922 COXBU7E912_0657COXBU7E912_0658COXBU7E912_0659COXBU7E912_0655COXBU7E912_0658
CBUR360115 COXBURSA331_A0761COXBURSA331_A0762COXBURSA331_A0763COXBURSA331_A0758COXBURSA331_A0762
CBUR227377 CBU_0646CBU_0647CBU_0648CBU_0643CBU_0647
CBOT536232 CLM_3261CLM_3260CLM_3259CLM_3262CLM_3260
CBOT515621 CLJ_B3119CLJ_B3118CLJ_B3117CLJ_B3120CLJ_B3118
CBOT508765 CLL_A1296CLL_A1297CLL_A1298CLL_A1295
CBOT498213 CLD_1677CLD_1678CLD_1679CLD_1676CLD_3201
CBOT441772 CLI_2921CLI_2920CLI_2919CLI_2922CLI_2975
CBOT441771 CLC_2764CLC_2763CLC_2762CLC_2765CLC_2815
CBOT441770 CLB_2831CLB_2830CLB_2829CLB_2832CLB_2882
CBOT36826 CBO2865CBO2864CBO2863CBO2866CBO2921
CBLO291272 BPEN_377BPEN_437BPEN_241BPEN_240BPEN_067
CBLO203907 BFL366BFL425BFL235BFL234BFL065
CBEI290402 CBEI_1225CBEI_1226CBEI_1227CBEI_1224
CACE272562 CAC0591CAC0592CAC0593CAC0590
CABO218497 CAB208CAB863CAB864CAB863
BWEI315730 BCERKBAB4_3942BCERKBAB4_3943BCERKBAB4_3944BCERKBAB4_3941BCERKBAB4_3943
BVIE269482 BCEP1808_4180BCEP1808_5269BCEP1808_0873BCEP1808_0877BCEP1808_2793
BTHU412694 BALH_3726BALH_3727BALH_3728BALH_3725BALH_3727
BTHU281309 BT9727_3852BT9727_3853BT9727_3854BT9727_3851BT9727_3853
BTHE226186 BT_1317BT_2416BT_4253BT_2416
BTHA271848 BTH_II1514BTH_I1530BTH_I1542BTH_I0595
BSUB BSU23270BSU23260BSU23250BSU23280
BSP36773 BCEP18194_B2300BCEP18194_B1027BCEP18194_A4057BCEP18194_A4064BCEP18194_A6016
BSP107806 BU112BU271BU459BU462BU059
BPSE320373 BURPS668_A1292BURPS668_3017BURPS668_3012BURPS668_0715
BPSE320372 BURPS1710B_B2916BURPS1710B_A3360BURPS1710B_A3355BURPS1710B_A0940
BPSE272560 BPSS0883BPSL2627BPSL2624BPSL0678
BPET94624 BPET0617BPET3957BPET0616BPET3958
BPER257313 BP2874BP3485BP2948BP0471
BPAR257311 BPP0955BPP0858BPP3871BPP4385
BMAL320389 BMA10247_A0959BMA10247_2017BMA10247_2013BMA10247_2442
BMAL320388 BMASAVP1_0332BMASAVP1_A0763BMASAVP1_A0767BMASAVP1_A2716
BMAL243160 BMA_A1349BMA_2146BMA_2143BMA_0230
BLIC279010 BL01890BL01889BL01888BL01891
BHAL272558 BH1555BH1556BH1557BH1554
BCLA66692 ABC1811ABC1812ABC1813ABC3987ABC1812
BCIC186490 BCI_0087BCI_0300BCI_0602BCI_0601BCI_0623
BCER572264 BCA_4223BCA_4224BCA_4225BCA_4222BCA_4224
BCER405917 BCE_4180BCE_4181BCE_4182BCE_4179BCE_4181
BCER315749 BCER98_2809BCER98_2810BCER98_2811BCER98_2808BCER98_2810
BCER288681 BCE33L3866BCE33L3867BCE33L3868BCE33L3865BCE33L3867
BCER226900 BC_4110BC_4111BC_4112BC_4109BC_4111
BCEN331272 BCEN2424_3795BCEN2424_4731BCEN2424_0956BCEN2424_0960BCEN2424_2688
BCEN331271 BCEN_4568BCEN_3636BCEN_0477BCEN_0481BCEN_2077
BBRO257310 BB1167BB0952BB4344BB4971
BAPH198804 BUSG104BUSG261BUSG443BUSG446BUSG056
BANT592021 BAA_4354BAA_4355BAA_4357BAA_4353BAA_4355
BANT568206 BAMEG_4372BAMEG_4373BAMEG_4375BAMEG_4371BAMEG_4373
BANT261594 GBAA4332GBAA4333GBAA4334GBAA4331GBAA4333
BANT260799 BAS4019BAS4020BAS4021BAS4018BAS4020
BAMY326423 RBAM_021410RBAM_021400RBAM_021390RBAM_021420
BAMB398577 BAMMC406_3686BAMMC406_4586BAMMC406_0826BAMMC406_0830BAMMC406_2606
BAMB339670 BAMB_5522BAMB_4122BAMB_0817BAMB_0821BAMB_2742
AVAR240292 AVA_3515AVA_1704AVA_1457AVA_3515
ASP76114 EBA3569EBA3120EBA3566EBA1045EBA3567
ASP62977 ACIAD0249ACIAD3249ACIAD3571ACIAD0247ACIAD2913
ASP62928 AZO0320AZO0318AZO2803AZO0319
ASP232721 AJS_4077AJS_2767AJS_3190AJS_2766
ASAL382245 ASA_2183ASA_1766ASA_0982ASA_0979ASA_1293
APLE434271 APJL_0403APJL_0404APJL_0405APJL_0402
APLE416269 APL_0383APL_0384APL_0385APL_0382
ANAE240017 ANA_0513ANA_0512ANA_0514ANA_0512
AMET293826 AMET_1019AMET_1020AMET_1021AMET_1018
AMAR329726 AM1_0608AM1_1010AM1_3853AM1_0608
AHYD196024 AHA_2116AHA_1807AHA_3329AHA_3333AHA_1311
AFER243159 AFE_2730AFE_2728AFE_2731AFE_1098
AEHR187272 MLG_0376MLG_0378MLG_0375MLG_0377
ADEH290397 ADEH_2741ADEH_2740ADEH_2739ADEH_2742ADEH_2740
ACRY349163 ACRY_2120ACRY_2815ACRY_2121ACRY_2119
ACEL351607 ACEL_1273ACEL_1272ACEL_1274ACEL_1272
ABOR393595 ABO_2173ABO_2171ABO_2174ABO_2172
ABAC204669 ACID345_2148ACID345_1214ACID345_3337ACID345_3140
AAVE397945 AAVE_4731AAVE_2231AAVE_3555AAVE_2232
AAEO224324 AQ_1707AQ_350AQ_132AQ_138AQ_350


Organism features enriched in list (features available for 314 out of the 335 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0000310117
Disease:Pharyngitis 0.006792088
Disease:bronchitis_and_pneumonitis 0.006792088
Endospores:No 3.386e-2061211
Endospores:Yes 1.493e-84753
GC_Content_Range4:0-40 3.157e-1373213
GC_Content_Range4:40-60 2.090e-10157224
GC_Content_Range7:30-40 3.825e-1154166
GC_Content_Range7:40-50 0.003726675117
GC_Content_Range7:50-60 5.532e-882107
Genome_Size_Range5:0-2 2.809e-1542155
Genome_Size_Range5:2-4 0.007360594197
Genome_Size_Range5:4-6 1.605e-14141184
Genome_Size_Range5:6-10 0.00016093747
Genome_Size_Range9:0-1 0.0018654727
Genome_Size_Range9:1-2 4.880e-1235128
Genome_Size_Range9:2-3 0.007619954120
Genome_Size_Range9:4-5 5.639e-87596
Genome_Size_Range9:5-6 6.023e-66688
Genome_Size_Range9:6-8 0.00064283038
Gram_Stain:Gram_Neg 2.743e-7209333
Gram_Stain:Gram_Pos 0.001484266150
Habitat:Host-associated 0.000012187206
Habitat:Multiple 0.0027800110178
Motility:No 0.000184263151
Motility:Yes 0.0017374160267
Optimal_temp.:- 0.0000969160257
Optimal_temp.:35-37 0.00330571213
Oxygen_Req:Microaerophilic 0.0046270418
Pathogenic_in:Animal 0.00044994866
Pathogenic_in:No 0.0092686110226
Shape:Coccus 6.525e-82282
Shape:Irregular_coccus 0.0018713317
Shape:Rod 1.744e-12228347
Shape:Sphere 0.0005401319
Shape:Spiral 1.593e-7434
Temp._range:Hyperthermophilic 0.0002454423
Temp._range:Mesophilic 0.0029335267473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 147
Effective number of orgs (counting one per cluster within 468 clusters): 125

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316058 ncbi Rhodopseudomonas palustris HaA21
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PMOB403833 ncbi Petrotoga mobilis SJ950
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NHAM323097 ncbi Nitrobacter hamburgensis X141
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.1
MSP266779 ncbi Chelativorans sp. BNC11
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FMAG334413 ncbi Finegoldia magna ATCC 293280
EFAE226185 ncbi Enterococcus faecalis V5830
ECAN269484 ncbi Ehrlichia canis Jake1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BQUI283165 ncbi Bartonella quintana Toulouse1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5831
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACAU438753 ncbi Azorhizobium caulinodans ORS 5711


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11331   EG11322   EG11321   EG10465   
WPIP955 WD_0710
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116 TVN0575
TTEN273068
TPEN368408
TPAL243276
TLET416591
TDEN243275
TACI273075 TA1014
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSOL273057
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMUT210007
SMAR399550
SGOR29390
SACI330779
RTYP257363
RSAL288705 RSAL33209_2347
RRIC452659
RRIC392021
RPRO272947
RPAL316058 RPB_2636
RPAL316057 RPD_2673
RPAL316055 RPE_2810
RPAL258594 RPA2726
RMAS416276
RFEL315456
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820 PTO0570
PMOB403833
PISL384616
PHOR70601
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244
NPHA348780 NP1356A
NHAM323097 NHAM_1816
MTHE187420
MSYN262723
MSTA339860
MSP409 M446_3102
MSP266779 MESO_1136
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LWEL386043
LSAK314315
LMON265669
LMON169963
LJOH257314
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LACI272621
IHOS453591
HWAL362976 HQ1396A
HSP64091
HSAL478009
HMUK485914
HMAR272569 RRNAC2367
HBUT415426
GBET391165 GBCGDNIH1_1006
FMAG334413
EFAE226185
ECAN269484 ECAJ_0112
CSUL444179
CSP78
CPHY357809
CPEL335992
CMET456442
CMAQ397948
CKOR374847
BTUR314724
BTRI382640 BT_1315
BQUI283165 BQ05420
BLON206672
BHER314723
BHEN283166
BGAR290434
BBUR224326
BBAC360095 BARBAKC583_0632
BAPH372461
BAFZ390236
BABO262698 BRUAB1_0783
AYEL322098
AURANTIMONAS
APHA212042 APH_0037
APER272557
AORE350688
AMAR234826 AM015
AFUL224325 AF_0484
ACAU438753 AZC_1263


Organism features enriched in list (features available for 138 out of the 147 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001353715112
Disease:Wide_range_of_infections 9.547e-81111
Endospores:No 2.931e-1183211
Endospores:Yes 0.0000464253
GC_Content_Range4:0-40 3.989e-1285213
GC_Content_Range4:40-60 0.000206036224
GC_Content_Range4:60-100 0.000022917145
GC_Content_Range7:0-30 3.456e-62547
GC_Content_Range7:30-40 6.300e-660166
GC_Content_Range7:50-60 0.000214412107
GC_Content_Range7:60-70 0.000182617134
Genome_Size_Range5:0-2 2.739e-2586155
Genome_Size_Range5:4-6 4.719e-1213184
Genome_Size_Range9:0-1 1.556e-71927
Genome_Size_Range9:1-2 2.834e-1667128
Genome_Size_Range9:3-4 0.00609991077
Genome_Size_Range9:4-5 4.825e-6796
Genome_Size_Range9:5-6 7.223e-6688
Gram_Stain:Gram_Neg 8.922e-1048333
Habitat:Host-associated 0.001301563206
Habitat:Multiple 0.000084325178
Habitat:Specialized 0.00122312253
Motility:Yes 0.007074852267
Optimal_temp.:- 0.005239449257
Oxygen_Req:Aerobic 0.002138031185
Oxygen_Req:Anaerobic 0.000276038102
Pathogenic_in:Animal 0.0000612466
Pathogenic_in:No 0.008923164226
Pathogenic_in:Swine 0.000702655
Salinity:Extreme_halophilic 0.008741057
Shape:Coccus 0.00080903182
Shape:Irregular_coccus 3.332e-71417
Shape:Rod 5.634e-953347
Shape:Sphere 2.264e-81619
Temp._range:Hyperthermophilic 2.465e-71723
Temp._range:Mesophilic 0.000062796473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 7
Effective number of orgs (counting one per cluster within 468 clusters): 7

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CCAV227941 ncbi Chlamydophila caviae GPIC 0.00025502745
PMAR167540 Prochlorococcus marinus pastoris MED4ax 0.00436394825
PMAR167542 ncbi Prochlorococcus marinus MIT 9515 0.00469154895
PMAR146891 ncbi Prochlorococcus marinus AS9601 0.00473994905
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00498774955
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00551455055
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00590915125


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11331   EG11322   EG11321   EG10465   
CCAV227941 CCA_00213CCA_00895CCA_00894CCA_00896CCA_00895
PMAR167540 PMM0442PMM0893PMM1643PMM1265PMM0893
PMAR167542 P9515ORF_0539P9515ORF_1023P9515ORF_1915P9515ORF_1489P9515ORF_1023
PMAR146891 A9601_04971A9601_09681A9601_18521A9601_14641A9601_09681
PMAR167546 P9301ORF_0477P9301ORF_0984P9301ORF_1873P9301ORF_1474P9301ORF_0984
PMAR74546 PMT9312_0441PMT9312_0907PMT9312_1735PMT9312_1359PMT9312_0907
PMAR93060 P9215_05211P9215_09991P9215_19161P9215_14901P9215_09991


Organism features enriched in list (features available for 6 out of the 7 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
GC_Content_Range4:0-40 0.00227316213
GC_Content_Range7:30-40 0.00049916166
Genome_Size_Range5:0-2 0.00032866155
Genome_Size_Range9:1-2 0.00010216128
Habitat:Aquatic 0.0004305591



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
ARO-PWY (chorismate biosynthesis I)5103280.4492
RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))5233310.4365
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222860.4069
PWY-6164 (3-dehydroquinate biosynthesis I)5163250.4058



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11331   EG11322   EG11321   EG10465   
EG114060.9998320.9998180.9998760.999739
EG113310.9997940.9996310.999722
EG113220.9998740.999746
EG113210.9996
EG10465



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PAIRWISE BLAST SCORES:

  EG11406   EG11331   EG11322   EG11321   EG10465   
EG114060.0f0----
EG11331-0.0f0---
EG11322--0.0f0--
EG11321---0.0f0-
EG10465----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants)) (degree of match pw to cand: 0.833, degree of match cand to pw: 1.000, average score: 0.959)
  Genes in pathway or complex:
             0.8763 0.7380 EG11079 (ribF) RIBF-MONOMER (bifunctional riboflavin kinase / FMN adenylyltransferase)
   *in cand* 0.9999 0.9997 EG11406 (ribC) RIBOFLAVIN-SYN-MONOMER (RibC)
   *in cand* 0.9998 0.9997 EG11322 (ribE) LUMAZINESYN-MONOMER (RibE)
   *in cand* 0.9998 0.9996 EG10465 (ribB) DIOHBUTANONEPSYN-MONOMER (3,4-dihydroxy-2-butanone 4-phosphate synthase)
   *in cand* 0.9998 0.9996 EG11321 (ribD) RIBOFLAVINSYNDEAM-MONOMER (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
   *in cand* 0.9998 0.9996 EG11331 (ribA) GTP-CYCLOHYDRO-II-MONOMER (GTP cyclohydrolase II)
  All candidate genes found in this pathway
   This pathway has holes



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11321 EG11322 (centered at EG11322)
EG10465 (centered at EG10465)
EG11331 (centered at EG11331)
EG11406 (centered at EG11406)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11406   EG11331   EG11322   EG11321   EG10465   
392/623391/623402/623399/623333/623
AAEO224324:0:Tyes111215405154
AAUR290340:2:Tyes1-20-
AAVE397945:0:Tyes2454-012971
ABAC204669:0:Tyes-942021381939
ABAU360910:0:Tyes--123960
ABOR393595:0:Tyes2-031
ABUT367737:0:Tyes-106713-0
ACAU438753:0:Tyes---0-
ACEL351607:0:Tyes10-20
ACRY349163:8:Tyes1702-20
ADEH290397:0:Tyes21031
AEHR187272:0:Tyes1-302
AFER243159:0:Tyes1610-160816110
AFUL224325:0:Tyes-0---
AHYD196024:0:Tyes789490196719710
ALAI441768:0:Tyes-215-0-
AMAR234826:0:Tyes---0-
AMAR329726:9:Tyes-039632120
AMET293826:0:Tyes1230-
ANAE240017:0:Tyes10-20
APHA212042:0:Tyes---0-
APLE416269:0:Tyes1230-
APLE434271:0:Tno1230-
ASAL382245:5:Tyes116075430300
ASP1667:3:Tyes023--
ASP232721:2:Tyes1296-14070
ASP62928:0:Tyes2-025321
ASP62977:0:Tyes22795308202479
ASP76114:2:Tyes14851217148301484
AVAR240292:3:Tyes-206424802064
BABO262698:1:Tno---0-
BAMB339670:2:Tno13940---
BAMB339670:3:Tno--041976
BAMB398577:2:Tno0890---
BAMB398577:3:Tno--041810
BAMY326423:0:Tyes2103-
BANT260799:0:Tno12302
BANT261594:2:Tno12302
BANT568206:2:Tyes12302
BANT592021:2:Tno12302
BAPH198804:0:Tyes522023793820
BBAC264462:0:Tyes2-0-1
BBAC360095:0:Tyes0----
BBRO257310:0:Tyes212-034324062
BCAN483179:1:Tno338--3370
BCEN331271:1:Tno9230---
BCEN331271:2:Tno--041624
BCEN331272:2:Tyes0933---
BCEN331272:3:Tyes--041729
BCER226900:1:Tyes12302
BCER288681:0:Tno12302
BCER315749:1:Tyes12302
BCER405917:1:Tyes12302
BCER572264:1:Tno12302
BCIC186490:0:Tyes0184466465485
BCLA66692:0:Tyes01221831
BFRA272559:1:Tyes-0318-482
BFRA295405:0:Tno-0368-0
BHAL272558:0:Tyes1230-
BJAP224911:0:Fyes0--1-
BLIC279010:0:Tyes2103-
BMAL243160:0:Tno-0---
BMAL243160:1:Tno--169516920
BMAL320388:0:Tno-0---
BMAL320388:1:Tno--041902
BMAL320389:0:Tyes-0---
BMAL320389:1:Tyes--40422
BMEL224914:1:Tno---0319
BMEL359391:1:Tno---3070
BOVI236:1:Tyes---2930
BPAR257311:0:Tno92-028873378
BPER257313:0:Tyes2167-272222340
BPET94624:0:Tyes1-338603387
BPSE272560:0:Tyes-0---
BPSE272560:1:Tyes--196219590
BPSE320372:0:Tno-0---
BPSE320372:1:Tno--229922940
BPSE320373:0:Tno-0---
BPSE320373:1:Tno--221122070
BPUM315750:0:Tyes1362-13600-
BQUI283165:0:Tyes0----
BSP107806:2:Tyes522073923950
BSP36773:1:Tyes12720---
BSP36773:2:Tyes--072001
BSP376:0:Tyes0--1-
BSUB:0:Tyes2103-
BSUI204722:1:Tyes329--3280
BSUI470137:1:Tno334--3330
BTHA271848:0:Tno-0---
BTHA271848:1:Tno--9249350
BTHE226186:0:Tyes011142989-1114
BTHU281309:1:Tno12302
BTHU412694:1:Tno12302
BTRI382640:1:Tyes0----
BVIE269482:6:Tyes01058---
BVIE269482:7:Tyes--031899
BWEI315730:4:Tyes12302
BXEN266265:0:Tyes----0
BXEN266265:1:Tyes-0---
CABO218497:0:Tyes0638-639638
CACE272562:1:Tyes1230-
CAULO:0:Tyes-01-0
CBEI290402:0:Tyes1230-
CBLO203907:0:Tyes2973551671660
CBLO291272:0:Tno3053641701690
CBOT36826:1:Tno210354
CBOT441770:0:Tyes210353
CBOT441771:0:Tno210355
CBOT441772:1:Tno210356
CBOT498213:1:Tno15121511151015130
CBOT508765:1:Tyes1230-
CBOT515621:2:Tyes21031
CBOT536232:0:Tno21031
CBUR227377:1:Tyes34504
CBUR360115:1:Tno45605
CBUR434922:2:Tno34504
CCAV227941:1:Tyes0675674676675
CCHL340177:0:Tyes502166705001667
CCON360104:2:Tyes-3230--
CCUR360105:0:Tyes-9780--
CDES477974:0:Tyes12302
CDIF272563:1:Tyes2103-
CDIP257309:0:Tyes10---
CEFF196164:0:Fyes2103-
CFEL264202:1:Tyes6971-01
CFET360106:0:Tyes-2370--
CGLU196627:0:Tyes2103-
CHOM360107:1:Tyes-16190--
CHUT269798:0:Tyes-02746-0
CHYD246194:0:Tyes21031
CJAP155077:0:Tyes70596
CJEI306537:0:Tyes10---
CJEJ192222:0:Tyes-6010--
CJEJ195099:0:Tno-6180--
CJEJ354242:2:Tyes-5770--
CJEJ360109:0:Tyes-0725--
CJEJ407148:0:Tno-6040--
CKLU431943:1:Tyes2103-
CMIC31964:2:Tyes12-0-
CMIC443906:2:Tyes2103-
CMUR243161:1:Tyes572120-
CNOV386415:0:Tyes21031
CPER195102:1:Tyes1230-
CPER195103:0:Tno1230-
CPER289380:3:Tyes1230-
CPNE115711:1:Tyes0765-766765
CPNE115713:0:Tno0355-354355
CPNE138677:0:Tno0359-358359
CPNE182082:0:Tno0365-364365
CPRO264201:0:Fyes2101561
CPSY167879:0:Tyes-32377930-
CRUT413404:0:Tyes0-22701
CSAL290398:0:Tyes20280251925212520
CSP501479:6:Fyes-292-1630
CSP501479:8:Fyes0----
CTEP194439:0:Tyes-83212720832
CTET212717:0:Tyes12302
CTRA471472:0:Tyes570120-
CTRA471473:0:Tno570120-
CVES412965:0:Tyes0-22571
CVIO243365:0:Tyes1123740112603012
DARO159087:0:Tyes3512-315603155
DDES207559:0:Tyes14111412141314100
DETH243164:0:Tyes21031
DGEO319795:1:Tyes-230-
DHAF138119:0:Tyes12302
DNOD246195:0:Tyes2-031
DOLE96561:0:Tyes21031
DPSY177439:2:Tyes41541641721470
DRAD243230:3:Tyes-230-
DRED349161:0:Tyes13101309130813110
DSHI398580:5:Tyes22500-22542249
DSP216389:0:Tyes21031
DSP255470:0:Tno21031
DVUL882:1:Tyes2103576
ECAN269484:0:Tyes---0-
ECAR218491:0:Tyes103710572322310
ECHA205920:0:Tyes66--0-
ECOL199310:0:Tno14921191103207
ECOL316407:0:Tno1261872102627
ECOL331111:6:Tno1372988102934
ECOL362663:0:Tno1128855102662
ECOL364106:1:Tno14161112103043
ECOL405955:2:Tyes1192882102743
ECOL409438:6:Tyes1370911102939
ECOL413997:0:Tno1265897102562
ECOL439855:4:Tno10471363102798
ECOL469008:0:Tno12901634253125320
ECOL481805:0:Tno13181689257025710
ECOL585034:0:Tno1294891102743
ECOL585035:0:Tno1256985102926
ECOL585055:0:Tno14041022102999
ECOL585056:2:Tno15061141103083
ECOL585057:0:Tno11521378013285
ECOL585397:0:Tno13761032103188
ECOL83334:0:Tno19441413103543
ECOLI:0:Tno1281880102683
ECOO157:0:Tno19881803103555
EFER585054:1:Tyes0290122312241604
ELIT314225:0:Tyes-2401-01145
ERUM254945:0:Tyes694--0-
ERUM302409:0:Tno689--0-
ESP42895:1:Tyes9171320102595
FALN326424:0:Tyes210-1
FJOH376686:0:Tyes666--04098
FNOD381764:0:Tyes-01--
FNUC190304:0:Tyes2301-
FPHI484022:1:Tyes1-302
FRANT:0:Tno1-302
FSP106370:0:Tyes210-1
FSP1855:0:Tyes012-1
FSUC59374:0:Tyes012--
FTUL351581:0:Tno2-031
FTUL393011:0:Tno2-031
FTUL393115:0:Tyes1-302
FTUL401614:0:Tyes2-031
FTUL418136:0:Tno2-031
FTUL458234:0:Tno2-031
GBET391165:0:Tyes0----
GFOR411154:0:Tyes2543-0-1391
GKAU235909:1:Tyes21031
GMET269799:1:Tyes12302
GOXY290633:5:Tyes-01--
GSUL243231:0:Tyes12302
GTHE420246:1:Tyes-1031
GURA351605:0:Tyes21031
GVIO251221:0:Tyes-0542650
HACI382638:1:Tyes-6110--
HARS204773:0:Tyes-04421705441
HAUR316274:2:Tyes0228111202
HCHE349521:0:Tyes12334318440844110
HDUC233412:0:Tyes1230-
HHAL349124:0:Tyes2-031
HHEP235279:0:Tyes-60--
HINF281310:0:Tyes101501182745573
HINF374930:0:Tyes60805208761063
HINF71421:0:Tno137201062718539
HMAR272569:8:Tyes0----
HMOD498761:0:Tyes12302
HNEP81032:0:Tyes--0-1
HPY:0:Tno-8070--
HPYL357544:1:Tyes-7980--
HPYL85963:0:Tno-7240--
HSOM205914:1:Tyes7269597449660
HSOM228400:0:Tno024219256707
HWAL362976:1:Tyes0----
ILOI283942:0:Tyes0-755475474
JSP290400:1:Tyes30340-30383031
JSP375286:0:Tyes-0182119161822
KPNE272620:2:Tyes8090431543142461
KRAD266940:2:Fyes--16950-
LBIF355278:2:Tyes02727--
LBIF456481:2:Tno02743--
LBOR355276:1:Tyes136413630--
LBOR355277:1:Tno10310--
LBRE387344:2:Tyes-10--
LCHO395495:0:Tyes12771654-21080
LINT189518:1:Tyes6886900--
LINT267671:1:Tno209620950--
LINT363253:3:Tyes-10-1
LLAC272622:5:Tyes012--
LLAC272623:0:Tyes1230-
LMES203120:1:Tyes0-2--
LPLA220668:0:Tyes-01--
LPNE272624:0:Tno012-1
LPNE297245:1:Fno012-1
LPNE297246:1:Fyes012-1
LPNE400673:0:Tno012-1
LREU557436:0:Tyes-01--
LSPH444177:1:Tyes273-2750-
LXYL281090:0:Tyes10-2-
MABS561007:1:Tyes10---
MAER449447:0:Tyes-077815660
MAQU351348:2:Tyes10821575201
MAVI243243:0:Tyes2105-
MBOV233413:0:Tno3670-
MBOV410289:0:Tno3670-
MCAP243233:0:Tyes204790031
MEXT419610:0:Tyes177--1780
MFLA265072:0:Tyes1602864014201603
MGIL350054:3:Tyes3109-
MLAB410358:0:Tyes2-0--
MLEP272631:0:Tyes01---
MLOT266835:2:Tyes1--0-
MMAG342108:0:Tyes-0-23212324
MMAR394221:0:Tyes1---0
MPET420662:1:Tyes1--02
MSME246196:0:Tyes45-0-
MSP164756:1:Tno34-0-
MSP164757:0:Tno34-0-
MSP189918:2:Tyes34-0-
MSP266779:3:Tyes---0-
MSP400668:0:Tyes0789-2860-
MSP409:2:Tyes---0-
MSUC221988:0:Tyes1186141184312480
MTBCDC:0:Tno023--
MTBRV:0:Tno034--
MTHE264732:0:Tyes12302
MTHE349307:0:Tyes-0--0
MTUB336982:0:Tno034--
MTUB419947:0:Tyes034--
MVAN350058:0:Tyes3450-
MXAN246197:0:Tyes1307775130613080
NARO279238:0:Tyes-1643-13040
NEUR228410:0:Tyes1787-178901788
NEUT335283:2:Tyes1398--01399
NFAR247156:2:Tyes210-1
NGON242231:0:Tyes6209511580578
NHAM323097:2:Tyes---0-
NMEN122586:0:Tno54354901086550
NMEN122587:0:Tyes7147232280725
NMEN272831:0:Tno6666722120673
NMEN374833:0:Tno7067152240717
NMUL323848:3:Tyes3-504
NOCE323261:1:Tyes1191-011921190
NPHA348780:2:Tyes0----
NSEN222891:0:Tyes337238-0-
NSP103690:6:Tyes-3488394603488
NSP35761:1:Tyes12302
NSP387092:0:Tyes-01022--
NWIN323098:0:Tyes0--1-
OANT439375:5:Tyes2024--20250
OCAR504832:0:Tyes1--0-
OIHE221109:0:Tyes2838-28360-
PACN267747:0:Tyes2103-
PAER208963:0:Tyes19302
PAER208964:0:Tno80697
PARC259536:0:Tyes2070130199420710
PATL342610:0:Tyes12673302
PCAR338963:0:Tyes5625635645610
PCRY335284:1:Tyes2360142228323610
PDIS435591:0:Tyes-3276034793276
PENT384676:0:Tyes183020
PFLU205922:0:Tyes70586
PFLU216595:1:Tyes60475
PFLU220664:0:Tyes70586
PFUR186497:0:Tyes0321-
PGIN242619:0:Tyes-0714--
PHAL326442:1:Tyes501-115011530
PING357804:0:Tyes1575-302
PINT246198:0:Tyes--0--
PINT246198:1:Tyes0616---
PLUM243265:0:Fyes1800147114721536
PLUT319225:0:Tyes484312290843
PMAR146891:0:Tyes04691352964469
PMAR167539:0:Tyes-08784000
PMAR167540:0:Tyes04581227837458
PMAR167542:0:Tyes04791357942479
PMAR167546:0:Tyes05021375988502
PMAR167555:0:Tyes-011407000
PMAR59920:0:Tno-09435210
PMAR74546:0:Tyes04711323933471
PMAR74547:0:Tyes-6450308645
PMAR93060:0:Tyes04831417979483
PMEN399739:0:Tyes80697
PMUL272843:1:Tyes0278199735
PNAP365044:8:Tyes1--02
PPEN278197:0:Tyes210--
PPRO298386:1:Tyes-562--0
PPRO298386:2:Tyes1374-30-
PPUT160488:0:Tno240383016
PPUT351746:0:Tyes222483015
PPUT76869:0:Tno233783015
PRUM264731:0:Tyes113416690-1669
PSP117:0:Tyes34453509-0-
PSP296591:2:Tyes--302
PSP312153:0:Tyes6-051
PSP56811:2:Tyes2180158208021810
PSTU379731:0:Tyes18302
PSYR205918:0:Tyes50364
PSYR223283:2:Tyes16302
PTHE370438:0:Tyes21031
PTOR263820:0:Tyes-0---
RDEN375451:4:Tyes16480-16471649
RETL347834:5:Tyes1--0-
REUT264198:2:Tyes-209--0
REUT264198:3:Tyes--07-
REUT381666:1:Tyes-350--0
REUT381666:2:Tyes--70-
RFER338969:1:Tyes--302
RLEG216596:6:Tyes1--01105
RMET266264:1:Tyes----0
RMET266264:2:Tyes-024872481-
RPAL258594:0:Tyes---0-
RPAL316055:0:Tyes---0-
RPAL316056:0:Tyes1--0-
RPAL316057:0:Tyes---0-
RPAL316058:0:Tyes---0-
RPOM246200:1:Tyes51633-07
RRUB269796:1:Tyes01807-1373
RSAL288705:0:Tyes0----
RSOL267608:1:Tyes--031
RSP101510:3:Fyes1230-
RSP357808:0:Tyes0-1-1
RSPH272943:4:Tyes376466-0374
RSPH349101:2:Tno376463-0373
RSPH349102:5:Tyes02690-4253
RXYL266117:0:Tyes12302
SACI56780:0:Tyes21022051
SAGA205921:0:Tno-230-
SAGA208435:0:Tno-230-
SAGA211110:0:Tyes-230-
SALA317655:1:Tyes-0-324314
SARE391037:0:Tyes13-03
SAUR158878:1:Tno320--
SAUR158879:1:Tno210--
SAUR196620:0:Tno210--
SAUR273036:0:Tno210--
SAUR282458:0:Tno210--
SAUR282459:0:Tno210--
SAUR359786:1:Tno210--
SAUR359787:1:Tno210--
SAUR367830:3:Tno210--
SAUR418127:0:Tyes210--
SAUR426430:0:Tno210--
SAUR93061:0:Fno210--
SAUR93062:1:Tno210--
SAVE227882:1:Fyes023-2
SBAL399599:3:Tyes22381579324632490
SBAL402882:1:Tno21151528308630890
SBOY300268:1:Tyes10911393102446
SCO:2:Fyes31012671
SDEG203122:0:Tyes70586
SDEN318161:0:Tyes581321302
SDYS300267:1:Tyes1485986012746
SELO269084:0:Tyes0431819125143
SENT209261:0:Tno0307109510961736
SENT220341:0:Tno1104788102622
SENT295319:0:Tno2430109110921821
SENT321314:2:Tno10081269102730
SENT454169:2:Tno10041338102822
SEPI176279:1:Tyes210--
SEPI176280:0:Tno210--
SERY405948:0:Tyes0127381
SFLE198214:0:Tyes1286908102620
SFLE373384:0:Tno1229863102560
SFUM335543:0:Tyes12302
SGLO343509:3:Tyes120911784024010
SHAE279808:0:Tyes-01--
SHAL458817:0:Tyes8671546303082
SHIGELLA:0:Tno1298916102557
SLAC55218:1:Fyes17740-17781773
SLOI323850:0:Tyes20562483117211690
SMED366394:3:Tyes1--0-
SMEL266834:2:Tyes1--0-
SONE211586:1:Tyes21222648327032730
SPEA398579:0:Tno22262609107310700
SPNE1313:0:Tyes2103-
SPNE170187:0:Tyes2103-
SPNE171101:0:Tno2103-
SPNE487213:0:Tno2103-
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