CANDIDATE ID: 228

CANDIDATE ID: 228

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9965900e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11363 (amiB) (b4169)
   Products of gene:
     - NACMURLALAAMI2-MONOMER (N-acetylmuramoyl-L-alanine amidase 2)
       Reactions:
        a peptidoglycan + H2O  =  N-acetylmuramate + a peptide

- EG11281 (mutL) (b4170)
   Products of gene:
     - EG11281-MONOMER (MutL)
     - MUTHLS-CPLX (MutHLS complex, methyl-directed mismatch repair)
       Reactions:
        a mismatched DNA base pair  =  a properly matched DNA base pair

- EG10595 (miaA) (b4171)
   Products of gene:
     - EG10595-MONOMER (tRNA(i6A37) synthase)
       Reactions:
        a tRNA + dimethylallyl diphosphate  =  a tRNA containing N6-dimethylallyladenosine + diphosphate
         In pathways
         PWY-2781 (PWY-2781)

- EG10438 (hfq) (b4172)
   Products of gene:
     - EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
     - CPLX0-1461 (HF-I, host factor for RNA phage Q β replication)

- EG10437 (hflX) (b4173)
   Products of gene:
     - EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
       Reactions:
        GTP + H2O  ->  GDP + phosphate + H+



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 293
Effective number of orgs (counting one per cluster within 468 clusters): 210

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.5
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B4
SSP292414 ncbi Ruegeria sp. TM10404
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SRUB309807 ncbi Salinibacter ruber DSM 138554
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170254
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-34
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUT319225 ncbi Chlorobium luteolum DSM 2734
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16224
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS105
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HNEP81032 Hyphomonas neptunium5
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-15
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CTEP194439 ncbi Chlorobium tepidum TLS4
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER195102 ncbi Clostridium perfringens 134
CJAP155077 Cellvibrio japonicus5
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334064
CDIF272563 ncbi Clostridium difficile 6304
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CCHL340177 ncbi Chlorobium chlorochromatii CaD34
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CAULO ncbi Caulobacter crescentus CB155
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-14
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5834
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs4
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  EG11363   EG11281   EG10595   EG10438   EG10437   
ZMOB264203 ZMO0195ZMO0354ZMO1138ZMO0347ZMO0348
YPSE349747 YPSIP31758_3656YPSIP31758_3655YPSIP31758_3654YPSIP31758_3653YPSIP31758_3652
YPSE273123 YPTB0422YPTB0423YPTB0424YPTB0425YPTB0426
YPES386656 YPDSF_3604YPDSF_3603YPDSF_3602YPDSF_3601YPDSF_3600
YPES377628 YPN_3301YPN_3300YPN_3299YPN_3298YPN_3297
YPES360102 YPA_3914YPA_3913YPA_3912YPA_3911YPA_3910
YPES349746 YPANGOLA_A0702YPANGOLA_A0701YPANGOLA_A0700YPANGOLA_A0699YPANGOLA_A0698
YPES214092 YPO0370YPO0371YPO0372YPO0373YPO0374
YPES187410 Y0627Y0628Y0629Y0630Y0632
YENT393305 YE0374YE0375YE0376YE0377YE0378
XORY360094 XOOORF_1979XOOORF_1980XOOORF_1720XOOORF_1721XOOORF_1722
XORY342109 XOO2578XOO2577XOO2799XOO2798XOO2797
XORY291331 XOO2733XOO2732XOO2947XOO2946XOO2945
XFAS405440 XFASM12_2082XFASM12_2081XFASM12_0071XFASM12_0070XFASM12_0069
XFAS183190 PD_1898PD_1897PD_0067PD_0066PD_0065
XFAS160492 XF0759XF0760XF0090XF0089XF0088
XCAM487884 XCC-B100_1879XCC-B100_1880XCC-B100_2544XCC-B100_2543XCC-B100_2542
XCAM316273 XCAORF_2571XCAORF_2570XCAORF_1951XCAORF_1952XCAORF_1953
XCAM314565 XC_1816XC_1817XC_2516XC_2515XC_2514
XCAM190485 XCC2299XCC2298XCC1715XCC1716XCC1717
XAXO190486 XAC2406XAC2405XAC1734XAC1735XAC1736
XAUT78245 XAUT_4667XAUT_3054XAUT_1659XAUT_4393XAUT_4392
VVUL216895 VV1_1291VV1_1292VV1_1293VV1_1294VV1_1295
VVUL196600 VV3074VV3073VV3072VV3071VV3070
VPAR223926 VP2820VP2819VP2818VP2817VP2816
VFIS312309 VF2326VF2325VF2324VF2323VF2322
VEIS391735 VEIS_1711VEIS_4225VEIS_4227VEIS_0075VEIS_0074
VCHO345073 VC0395_A2755VC0395_A2756VC0395_A2757VC0395_A2758VC0395_A2759
VCHO VC0344VC0345VC0346VC0347VC0348
TTUR377629 TERTU_3561TERTU_3560TERTU_3559TERTU_3558TERTU_3557
TTEN273068 TTE2424TTE1358TTE1359TTE1360TTE1127
TSP1755 TETH514_0926TETH514_1612TETH514_1613TETH514_1614TETH514_1441
TPSE340099 TETH39_0447TETH39_1175TETH39_1176TETH39_1177TETH39_1001
TDEN292415 TBD_1519TBD_1517TBD_1512TBD_1533TBD_0602
TCRU317025 TCR_1083TCR_1084TCR_1085TCR_1086TCR_1087
SWOL335541 SWOL_0126SWOL_0977SWOL_0979SWOL_0980
STYP99287 STM4358STM4359STM4360STM4361STM4362
STHE292459 STH1748STH1747STH1746STH2123
SSP94122 SHEWANA3_0594SHEWANA3_0595SHEWANA3_0596SHEWANA3_0597SHEWANA3_0598
SSP644076 SCH4B_4242SCH4B_3482SCH4B_2287SCH4B_2288
SSP292414 TM1040_0866TM1040_0102TM1040_1356TM1040_1355
SSON300269 SSO_4354SSO_4355SSO_4356SSO_4357SSO_4358
SSED425104 SSED_0794SSED_0795SSED_0796SSED_0797SSED_0798
SRUB309807 SRU_2497SRU_1712SRU_1498SRU_2412
SPRO399741 SPRO_0428SPRO_0429SPRO_0430SPRO_0431SPRO_0432
SPEA398579 SPEA_3543SPEA_3542SPEA_3541SPEA_3540SPEA_3539
SONE211586 SO_0600SO_0601SO_0602SO_0603SO_0604
SMEL266834 SMC01335SMC00932SMC01435SMC01048SMC01049
SMED366394 SMED_0959SMED_0428SMED_2011SMED_1095SMED_1096
SLOI323850 SHEW_0563SHEW_0564SHEW_0565SHEW_0566SHEW_0567
SLAC55218 SL1157_2544SL1157_1337SL1157_2690SL1157_2691
SHIGELLA AMIBMUTLMIAAHFQHFLX
SHAL458817 SHAL_3637SHAL_3636SHAL_3635SHAL_3634SHAL_3633
SGLO343509 SG0334SG0335SG0336SG0337SG0338
SFUM335543 SFUM_0729SFUM_1919SFUM_1920SFUM_3183
SFLE373384 SFV_4327SFV_4328SFV_4329SFV_4330SFV_4331
SFLE198214 AAN45741.1AAN45742.1AAN45743.1AAN45744.1AAN45745.1
SENT454169 SEHA_C4776SEHA_C4777SEHA_C4778SEHA_C4779SEHA_C4780
SENT321314 SCH_4234SCH_4235SCH_4236SCH_4237SCH_4238
SENT295319 SPA4175SPA4176SPA4177SPA4178SPA4179
SENT220341 STY4715STY4716STY4717STY4718STY4719
SENT209261 T4409T4410T4411T4412T4413
SDYS300267 SDY_4420SDY_4419SDY_4418SDY_4417SDY_4416
SDEN318161 SDEN_3208SDEN_3207SDEN_3206SDEN_3205SDEN_3204
SDEG203122 SDE_2670SDE_2669SDE_2668SDE_2667SDE_2666
SBOY300268 SBO_4287SBO_4286SBO_4285SBO_4284SBO_4283
SBAL402882 SHEW185_3770SHEW185_3769SHEW185_3768SHEW185_3767SHEW185_3766
SBAL399599 SBAL195_3896SBAL195_3895SBAL195_3894SBAL195_3893SBAL195_3892
SALA317655 SALA_3173SALA_1626SALA_1469SALA_1272
SACI56780 SYN_02145SYN_02889SYN_02888SYN_01762
RSPH349102 RSPH17025_1858RSPH17025_2933RSPH17025_1493RSPH17025_1494
RSPH349101 RSPH17029_1625RSPH17029_2758RSPH17029_1451RSPH17029_1450
RSPH272943 RSP_2979RSP_1095RSP_2843RSP_2844
RSOL267608 RSC2539RSC2563RSC2564RSC1220RSC1221
RRUB269796 RRU_A2148RRU_A2946RRU_A0466RRU_A1684RRU_A1685
RPOM246200 SPO_2588SPO_3362SPO_2081SPO_2080
RPAL316058 RPB_3008RPB_4176RPB_3346RPB_2878RPB_2877
RPAL316057 RPD_2443RPD_4032RPD_2097RPD_2594RPD_2595
RPAL316056 RPC_2853RPC_1389RPC_3256RPC_2582RPC_2583
RPAL316055 RPE_2978RPE_1420RPE_2186RPE_2762RPE_2763
RPAL258594 RPA2451RPA4371RPA2030RPA2597RPA2598
RMET266264 RMET_0526RMET_2908RMET_2909RMET_2101RMET_2100
RLEG216596 RL1742RL0910RL3249RL2284RL2285
RFER338969 RFER_3303RFER_3308RFER_1535RFER_2302RFER_2301
REUT381666 H16_A0597H16_A3069H16_A3070H16_A2359H16_A2358
REUT264198 REUT_A0584REUT_A2769REUT_A2770REUT_A2081REUT_A2080
RETL347834 RHE_CH01646RHE_CH00848RHE_CH02793RHE_CH01954RHE_CH01955
RDEN375451 RD1_2821RD1_0662RD1_2755RD1_2754
PTHE370438 PTH_1342PTH_1344PTH_1345PTH_2120
PSYR223283 PSPTO_4945PSPTO_4944PSPTO_4943PSPTO_4942PSPTO_4941
PSYR205918 PSYR_0569PSYR_0570PSYR_0571PSYR_0572PSYR_0573
PSTU379731 PST_3671PST_3670PST_3669PST_3668PST_3667
PSP312153 PNUC_0595PNUC_1760PNUC_1286PNUC_1285
PSP296591 BPRO_3199BPRO_3209BPRO_3212BPRO_2603BPRO_2602
PPUT76869 PPUTGB1_4949PPUTGB1_4948PPUTGB1_4947PPUTGB1_4946PPUTGB1_4945
PPUT351746 PPUT_4773PPUT_4772PPUT_4771PPUT_4770PPUT_4769
PPUT160488 PP_4897PP_4896PP_4895PP_4894PP_4893
PPRO298386 PBPRA3353PBPRA3352PBPRA3351PBPRA3350PBPRA3349
PNAP365044 PNAP_1170PNAP_1157PNAP_1155PNAP_1877PNAP_1878
PMUL272843 PM0903PM0904PM0905PM0906PM0907
PMEN399739 PMEN_0632PMEN_0633PMEN_0634PMEN_0635PMEN_0636
PLUT319225 PLUT_2072PLUT_1981PLUT_1180PLUT_1355
PLUM243265 PLU4584PLU4583PLU4582PLU4581PLU4580
PING357804 PING_3241PING_3240PING_3239PING_3238PING_3237
PHAL326442 PSHAA0268PSHAA0269PSHAA0270PSHAA0271PSHAA0272
PFLU220664 PFL_0563PFL_0564PFL_0565PFL_0566PFL_0567
PFLU216595 PFLU0517PFLU0518PFLU0519PFLU0520PFLU0521
PFLU205922 PFL_0520PFL_0521PFL_0522PFL_0523PFL_0524
PENT384676 PSEEN4946PSEEN4945PSEEN4944PSEEN4943PSEEN4942
PCAR338963 PCAR_1511PCAR_1304PCAR_1305PCAR_1306PCAR_2043
PATL342610 PATL_3975PATL_3976PATL_3977PATL_3978PATL_3979
PAER208964 PA4947PA4946PA4945PA4944PA4943
PAER208963 PA14_65370PA14_65350PA14_65320PA14_65310PA14_65300
OIHE221109 OB1632OB1634OB1635OB1648
OCAR504832 OCAR_5986OCAR_7241OCAR_5283OCAR_6100OCAR_6101
OANT439375 OANT_2267OANT_3049OANT_1801OANT_2208OANT_2207
NWIN323098 NWI_1719NWI_2548NWI_2344NWI_1449NWI_1450
NOCE323261 NOC_0337NOC_0336NOC_2591NOC_2590NOC_2589
NMUL323848 NMUL_A2532NMUL_A1144NMUL_A0092NMUL_A0447NMUL_A0446
NMEN374833 NMCC_1687NMCC_1353NMCC_0877NMCC_0712NMCC_1154
NMEN272831 NMC1694NMC1378NMC0912NMC0702NMC1171
NMEN122587 NMA2028NMA1655NMA1130NMA0961NMA1445
NMEN122586 NMB_0456NMB_1442NMB_0935NMB_0748NMB_1041
NHAM323097 NHAM_1823NHAM_3169NHAM_2723NHAM_1841NHAM_1842
NGON242231 NGO1502NGO0744NGO0940NGO0326NGO0684
NEUT335283 NEUT_1896NEUT_1828NEUT_0386NEUT_0961NEUT_0962
NEUR228410 NE0656NE1742NE1976NE1287NE1286
NARO279238 SARO_2317SARO_2127SARO_1931SARO_1932
MXAN246197 MXAN_3886MXAN_4026MXAN_3731MXAN_1356
MTHE264732 MOTH_0517MOTH_1114MOTH_1115MOTH_1116
MSUC221988 MS1515MS1516MS1517MS1518MS1519
MSP409 M446_5842M446_6625M446_6189M446_5942M446_5943
MSP400668 MMWYL1_2635MMWYL1_2634MMWYL1_2633MMWYL1_2632MMWYL1_2631
MSP266779 MESO_1709MESO_0441MESO_1743MESO_1613MESO_1612
MPET420662 MPE_A2027MPE_A2031MPE_A2034MPE_A1991MPE_A1990
MMAR394221 MMAR10_1297MMAR10_0616MMAR10_2021MMAR10_1448MMAR10_1449
MMAG342108 AMB3238AMB4416AMB3506AMB2372AMB2373
MLOT266835 MLR0213MLL8278MLL1448MLR0402MLR0403
MFLA265072 MFLA_1381MFLA_1384MFLA_1385MFLA_1589MFLA_1588
MEXT419610 MEXT_3661MEXT_4265MEXT_2654MEXT_2824MEXT_2825
MCAP243233 MCA_1296MCA_1692MCA_1691MCA_1983MCA_1982
MAQU351348 MAQU_2772MAQU_2771MAQU_2770MAQU_2769MAQU_2768
LSPH444177 BSPH_3903BSPH_1656BSPH_1660BSPH_4371
LPNE400673 LPC_0437LPC_0438LPC_0439LPC_0010LPC_0011
LPNE297246 LPP2753LPP2752LPP2751LPP0009LPP0010
LPNE297245 LPL2626LPL2625LPL2624LPL0009LPL0010
LPNE272624 LPG2698LPG2697LPG2696LPG0009LPG0010
LCHO395495 LCHO_1129LCHO_1125LCHO_1285LCHO_2863LCHO_2862
KPNE272620 GKPORF_B3925GKPORF_B3926GKPORF_B3927GKPORF_B3928GKPORF_B3929
JSP375286 MMA_0464MMA_0462MMA_0461MMA_2122MMA_2121
JSP290400 JANN_2536JANN_4047JANN_2244JANN_2245
ILOI283942 IL0330IL0331IL0332IL0333IL0334
HSOM228400 HSM_1567HSM_1568HSM_1569HSM_1074HSM_1075
HSOM205914 HS_1082HS_1083HS_1084HS_1105HS_1104
HNEP81032 HNE_0674HNE_0913HNE_0452HNE_2006HNE_2005
HMOD498761 HM1_2720HM1_2583HM1_2581HM1_2580HM1_2573
HINF71421 HI_0066HI_0067HI_0068HI_0411
HINF374930 CGSHIEE_02965CGSHIEE_02960CGSHIEE_02955CGSHIEE_00940
HINF281310 NTHI0079NTHI0080NTHI0081NTHI0535
HHAL349124 HHAL_0669HHAL_0668HHAL_0667HHAL_0666HHAL_0665
HDUC233412 HD_0450HD_0743HD_0742HD_0741HD_0740
HCHE349521 HCH_05387HCH_05385HCH_05384HCH_05383HCH_05382
HARS204773 HEAR0408HEAR0406HEAR0405HEAR1269HEAR1271
GURA351605 GURA_2385GURA_1770GURA_1771GURA_1772GURA_0905
GTHE420246 GTNG_1161GTNG_1167GTNG_1168GTNG_1179
GSUL243231 GSU_1821GSU_2001GSU_2000GSU_1999GSU_1009
GOXY290633 GOX1732GOX1252GOX1086GOX0465
GMET269799 GMET_1425GMET_2053GMET_2052GMET_2051GMET_2557
GKAU235909 GK3255GK1307GK1312GK1313GK1324
GBET391165 GBCGDNIH1_0282GBCGDNIH1_0463GBCGDNIH1_1482GBCGDNIH1_1123GBCGDNIH1_1124
FTUL458234 FTA_1661FTA_0948FTA_0949FTA_0950
FTUL418136 FTW_1584FTW_1100FTW_1099FTW_1098
FTUL401614 FTN_0577FTN_1052FTN_1051FTN_1050
FTUL393115 FTF0486FTF0629FTF0630FTF0631
FTUL393011 FTH_1523FTH_0882FTH_0883FTH_0884
FTUL351581 FTL_1576FTL_0897FTL_0898FTL_0899
FRANT MUTLMIAAHFQHFLX
FPHI484022 FPHI_0261FPHI_1537FPHI_1538FPHI_1539
ESP42895 ENT638_0352ENT638_0353ENT638_0354ENT638_0355ENT638_0356
ELIT314225 ELI_06765ELI_05795ELI_05520ELI_06260ELI_06255
EFER585054 EFER_4222EFER_4223EFER_4224EFER_4225EFER_4226
ECOO157 AMIBMUTLMIAAHFQHFLX
ECOL83334 ECS5145ECS5146ECS5147ECS5148ECS5149
ECOL585397 ECED1_4954ECED1_4955ECED1_4956ECED1_4957ECED1_4958
ECOL585057 ECIAI39_4633ECIAI39_4634ECIAI39_4636ECIAI39_4637ECIAI39_4638
ECOL585056 ECUMN_4702ECUMN_4703ECUMN_4704ECUMN_4705ECUMN_4706
ECOL585055 EC55989_4724EC55989_4725EC55989_4726EC55989_4727EC55989_4728
ECOL585035 ECS88_4755ECS88_4756ECS88_4757ECS88_4758ECS88_4759
ECOL585034 ECIAI1_4402ECIAI1_4403ECIAI1_4404ECIAI1_4405ECIAI1_4406
ECOL481805 ECOLC_3844ECOLC_3843ECOLC_3842ECOLC_3841ECOLC_3840
ECOL469008 ECBD_3865ECBD_3864ECBD_3863ECBD_3862ECBD_3861
ECOL439855 ECSMS35_4640ECSMS35_4641ECSMS35_4642ECSMS35_4643ECSMS35_4644
ECOL413997 ECB_04036ECB_04037ECB_04038ECB_04039ECB_04040
ECOL409438 ECSE_4466ECSE_4467ECSE_4468ECSE_4469ECSE_4470
ECOL405955 APECO1_2222APECO1_2221APECO1_2220APECO1_2219APECO1_2218
ECOL364106 UTI89_C4769UTI89_C4770UTI89_C4771UTI89_C4772UTI89_C4773
ECOL362663 ECP_4414ECP_4415ECP_4416ECP_4417ECP_4418
ECOL331111 ECE24377A_4727ECE24377A_4728ECE24377A_4729ECE24377A_4730ECE24377A_4731
ECOL316407 ECK4165:JW4127:B4169ECK4166:JW4128:B4170ECK4167:JW4129:B4171ECK4168:JW4130:B4172ECK4169:JW4131:B4173
ECOL199310 C5253C5254C5255C5256C5257
ECAR218491 ECA3937ECA3936ECA3935ECA3934ECA3933
DVUL882 DVU_2371DVU_0483DVU_1533DVU_3236
DSHI398580 DSHI_1169DSHI_0363DSHI_1567DSHI_1566
DRED349161 DRED_2693DRED_1884DRED_1882DRED_1881DRED_1259
DNOD246195 DNO_0311DNO_1116DNO_1117DNO_0595DNO_0596
DARO159087 DARO_3049DARO_3164DARO_3171DARO_2980DARO_2979
CVIO243365 CV_3822CV_1342CV_3389CV_3533CV_3532
CTEP194439 CT_0054CT_2028CT_0973CT_1384
CSP78 CAUL_2573CAUL_4062CAUL_3349CAUL_2610CAUL_2611
CSP501479 CSE45_2376CSE45_3238CSE45_1387CSE45_1388
CSAL290398 CSAL_1274CSAL_1275CSAL_1276CSAL_1277CSAL_1278
CPSY167879 CPS_0322CPS_0323CPS_0324CPS_0325CPS_0326
CPER195102 CPE1156CPE1157CPE1158CPE1959
CJAP155077 CJA_3082CJA_3081CJA_3080CJA_3079CJA_3078
CHUT269798 CHU_0750CHU_0014CHU_2776CHU_3840
CDIF272563 CD2761CD1975CD1974CD0788
CDES477974 DAUD_1509DAUD_0554DAUD_0556DAUD_0557DAUD_1110
CCHL340177 CAG_0076CAG_0145CAG_1394CAG_1174
CBUR434922 COXBU7E912_1188COXBU7E912_1186COXBU7E912_1185COXBU7E912_1048
CBUR360115 COXBURSA331_A0843COXBURSA331_A0845COXBURSA331_A0846COXBURSA331_A0940
CBUR227377 CBU_1085CBU_1083CBU_1082CBU_0999
CBOT508765 CLL_A1818CLL_A1817CLL_A1816CLL_A1004
CBOT498213 CLD_2841CLD_2842CLD_2843CLD_1460
CBLO291272 BPEN_080BPEN_081BPEN_082BPEN_083
CBEI290402 CBEI_0188CBEI_2565CBEI_2564CBEI_2563CBEI_4227
CAULO CC1876CC0695CC2098CC1745CC1746
CACE272562 CAC1836CAC1835CAC1834CAC2299
BWEI315730 BCERKBAB4_3539BCERKBAB4_3479BCERKBAB4_3478BCERKBAB4_3472
BVIE269482 BCEP1808_2656BCEP1808_0724BCEP1808_0723BCEP1808_1734BCEP1808_1733
BTRI382640 BT_1192BT_0298BT_1323BT_1322
BTHU412694 BALH_3396BALH_3341BALH_3340BALH_3334
BTHU281309 BT9727_3509BT9727_3459BT9727_3458BT9727_3452
BTHA271848 BTH_I0722BTH_I1320BTH_I1319BTH_I2239BTH_I2240
BSUI470137 BSUIS_A0955BSUIS_B0222BSUIS_A1441BSUIS_A1160BSUIS_A1159
BSUI204722 BR_0915BR_A0218BR_1390BR_1111BR_1110
BSUB BSU24190BSU17050BSU17330BSU17340BSU17430
BSP376 BRADO3513BRADO6079BRADO5567BRADO3855BRADO3854
BSP36773 BCEP18194_A5895BCEP18194_A3853BCEP18194_A3852BCEP18194_A5108BCEP18194_A5107
BQUI283165 BQ05880BQ02570BQ05340BQ05350
BPUM315750 BPUM_1609BPUM_1624BPUM_1625BPUM_1634
BPSE320373 BURPS668_0907BURPS668_3264BURPS668_3265BURPS668_2184BURPS668_2183
BPSE320372 BURPS1710B_A1122BURPS1710B_A3583BURPS1710B_A3584BURPS1710B_A2551BURPS1710B_A2550
BPSE272560 BPSL0859BPSL2814BPSL2815BPSL1518BPSL1519
BPET94624 BPET0830BPET0827BPET0826BPET2025BPET2026
BPER257313 BP0246BP0244BP0243BP2193BP2192
BPAR257311 BPP3621BPP3623BPP3624BPP2849BPP2848
BOVI236 GBOORF0941GBOORFA0215GBOORF1404GBOORF1112GBOORF1111
BMEL359391 BAB1_0931BAB2_0212BAB1_1409BAB1_1134BAB1_1133
BMEL224914 BMEI1056BMEII1026BMEI0616BMEI0872BMEI0873
BMAL320389 BMA10247_0114BMA10247_2192BMA10247_2193BMA10247_1101BMA10247_1100
BMAL320388 BMASAVP1_A0665BMASAVP1_A0514BMASAVP1_A0513BMASAVP1_A1829BMASAVP1_A1828
BMAL243160 BMA_0365BMA_2314BMA_2315BMA_1340BMA_1339
BLIC279010 BL01120BL03664BL05174BL05175BL03236
BJAP224911 BLR4306BLR7493BLL6504BSR4491BLR4492
BHEN283166 BH08710BH02690BH07490BH07500
BCLA66692 ABC3448ABC2186ABC2184ABC2183
BCIC186490 BCI_0585BCI_0584BCI_0583BCI_0581BCI_0580
BCER572264 BCA_3865BCA_3804BCA_3803BCA_3797
BCER405917 BCE_3802BCE_3741BCE_3740BCE_3734
BCER315749 BCER98_2420BCER98_2391BCER98_2390BCER98_2384
BCER288681 BCE33L3527BCE33L3473BCE33L3472BCE33L3465
BCER226900 BC_3768BC_3714BC_3713BC_3708
BCEN331272 BCEN2424_2563BCEN2424_0765BCEN2424_0764BCEN2424_1807BCEN2424_1806
BCEN331271 BCEN_1952BCEN_0281BCEN_0280BCEN_6272
BCAN483179 BCAN_A0927BCAN_B0219BCAN_A1422BCAN_A1130BCAN_A1129
BBRO257310 BB4056BB4058BB4059BB3170BB3169
BBAC360095 BARBAKC583_0802BARBAKC583_1201BARBAKC583_0624BARBAKC583_0625
BANT592021 BAA_3929BAA_3866BAA_3865BAA_1898
BANT568206 BAMEG_0727BAMEG_0790BAMEG_0791BAMEG_2763
BANT261594 GBAA3904GBAA3843GBAA3842GBAA1828
BANT260799 BAS3617BAS3560BAS3559BAS1693
BAMB398577 BAMMC406_2482BAMMC406_0685BAMMC406_0684BAMMC406_1718BAMMC406_1717
BAMB339670 BAMB_2611BAMB_0660BAMB_0659BAMB_1745BAMB_1744
BABO262698 BRUAB1_0925BRUAB2_0214BRUAB1_1386BRUAB1_1117BRUAB1_1116
ASP76114 EBA4451EBA658EBA7097EBA1255EBA1254
ASP62977 ACIAD2375ACIAD2374ACIAD2373ACIAD3005
ASP62928 AZO1243AZO3126AZO3131AZO0932AZO0933
ASP232721 AJS_0983AJS_0978AJS_3111AJS_1175AJS_1176
ASAL382245 ASA_3372ASA_3371ASA_3370ASA_3369ASA_3368
APLE434271 APJL_1155APJL_2005APJL_2007APJL_2008APJL_2009
APLE416269 APL_1136APL_1958APL_1960APL_1961APL_1962
AORE350688 CLOS_1553CLOS_1552CLOS_1551CLOS_1786
AMET293826 AMET_1982AMET_2543AMET_2542AMET_2541
AHYD196024 AHA_0921AHA_0922AHA_0923AHA_0924AHA_0925
AFER243159 AFE_0742AFE_1163AFE_1162AFE_1202AFE_1201
AEHR187272 MLG_0570MLG_0571MLG_0572MLG_0573MLG_0574
ADEH290397 ADEH_1694ADEH_1715ADEH_1512ADEH_0203
ACRY349163 ACRY_2027ACRY_0628ACRY_1762ACRY_1761
ACAU438753 AZC_3626AZC_2393AZC_2575AZC_3080AZC_3079
ABOR393595 ABO_2206ABO_2205ABO_2204ABO_2203ABO_2202
ABAU360910 BAV0731BAV0725BAV0724BAV2338BAV2337
ABAC204669 ACID345_1153ACID345_3219ACID345_4559ACID345_4341ACID345_4340
AAVE397945 AAVE_1305AAVE_1300AAVE_1294AAVE_1429AAVE_1430


Organism features enriched in list (features available for 274 out of the 293 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00597813392
Endospores:No 3.226e-2047211
GC_Content_Range4:0-40 4.386e-2048213
GC_Content_Range4:40-60 2.075e-6132224
GC_Content_Range4:60-100 3.324e-794145
GC_Content_Range7:0-30 2.272e-7647
GC_Content_Range7:30-40 1.087e-1142166
GC_Content_Range7:50-60 8.728e-1180107
GC_Content_Range7:60-70 1.624e-993134
GC_Content_Range7:70-100 0.0085840111
Genome_Size_Range5:0-2 1.959e-2916155
Genome_Size_Range5:2-4 0.008888581197
Genome_Size_Range5:4-6 2.770e-28147184
Genome_Size_Range5:6-10 0.00677043047
Genome_Size_Range9:0-1 5.378e-7127
Genome_Size_Range9:1-2 1.595e-2115128
Genome_Size_Range9:2-3 0.000129439120
Genome_Size_Range9:4-5 8.808e-127596
Genome_Size_Range9:5-6 3.276e-137288
Genome_Size_Range9:6-8 0.00119042738
Gram_Stain:Gram_Neg 5.673e-32225333
Gram_Stain:Gram_Pos 1.128e-1431150
Habitat:Host-associated 0.000328878206
Habitat:Multiple 0.0000880104178
Habitat:Specialized 0.00026341353
Habitat:Terrestrial 0.00342232231
Motility:No 1.236e-1530151
Motility:Yes 1.095e-15173267
Optimal_temp.:- 0.0058439134257
Optimal_temp.:25-30 4.178e-71919
Optimal_temp.:35-37 0.00004681313
Optimal_temp.:37 0.001876237106
Oxygen_Req:Aerobic 0.0011969103185
Oxygen_Req:Anaerobic 5.214e-628102
Oxygen_Req:Facultative 0.0006498112201
Pathogenic_in:Animal 0.00169724266
Shape:Coccobacillus 0.00022171111
Shape:Coccus 3.116e-111282
Shape:Rod 1.295e-27226347
Shape:Sphere 0.0006647219
Shape:Spiral 0.0000427534
Temp._range:Hyperthermophilic 6.709e-6123
Temp._range:Mesophilic 0.0012099236473
Temp._range:Thermophilic 0.0045063935



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 177
Effective number of orgs (counting one per cluster within 468 clusters): 155

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SPNE488221 ncbi Streptococcus pneumoniae 705851
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  EG11363   EG11281   EG10595   EG10438   EG10437   
WSUC273121 WS0243
WPIP955 WD_0509
WPIP80849 WB_0593
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0572
TTHE262724 TT_C0204
TPEN368408
TPAL243276
TKOD69014
TELO197221 TLR0648
TDEN326298 TMDEN_0722
TDEN243275 TDE_0057
TACI273075
STOK273063
STHE322159 STER_1195
STHE299768 STR1228
STHE264199 STU1228
SSP84588 SYNW0094OR2354
SSP64471 GSYN0100
SSP387093 SUN_1742
SSP1131 SYNCC9605_0086
SSOL273057
SPNE488221 SP70585_0731
SMAR399550
SACI330779
RXYL266117 RXYL_0293
RTYP257363 RT0871
RSAL288705 RSAL33209_0731
RRIC452659 RRIOWA_1592
RRIC392021 A1G_07470
RPRO272947 RP880
RMAS416276 RMA_1345
RFEL315456 RF_1387
RCON272944 RC1361
RCAN293613 A1E_05630
RBEL391896 A1I_07705
RBEL336407 RBE_1387
RAKA293614 A1C_06805
PTOR263820
PRUM264731 GFRORF0036
PPEN278197 PEPE_1273
PMAR93060
PMAR74547 PMT0120
PMAR74546
PMAR59920 PMN2A_1214
PMAR167555 NATL1_20891
PMAR167546
PMAR167542
PMAR167540
PMAR167539 PRO_1797
PMAR146891
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244 OTBS_1956
NSP387092 NIS_0763
NSEN222891
NPHA348780 NP0536A
MVAN350058 MVAN_2436
MTHE349307 MTHE_1478
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM1682
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML0997
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1703
MBAR269797 MBAR_A1494
MART243272
MAEO419665
MACE188937 MA0522
LXYL281090 LXX15960
LSAK314315 LSA0363
LMES203120 LEUM_1575
LLAC272623 L0276
LLAC272622 LACR_2517
LJOH257314 LJ_0466
LHEL405566 LHV_0428
LGAS324831 LGAS_0413
LDEL390333 LDB1615
LDEL321956 LBUL_1494
LCAS321967 LSEI_2234
LBRE387344 LVIS_0992
LBIF456481 LEPBI_I0479
LBIF355278 LBF_0461
LACI272621 LBA0409
IHOS453591
HWAL362976 HQ1456A
HSP64091 VNG0159G
HSAL478009 OE1267R
HPYL85963 JHP0709
HPYL357544 HPAG1_0757
HPY
HMUK485914 HMUK_0376
HMAR272569 RRNAC2550
HHEP235279 HH_0828
HBUT415426
HACI382638
FSUC59374
ERUM302409 ERGA_CDS_02100
ERUM254945 ERWE_CDS_02150
ECHA205920 ECH_0884
ECAN269484 ECAJ_0216
DRAD243230 DR_1690
DGEO319795 DGEO_0860
CVES412965 COSY_0703
CSUL444179
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMIC443906 CMM_2019
CMIC31964 CMS1214
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_1213
CJEJ360109 JJD26997_0456
CJEJ354242 CJJ81176_1285
CJEJ195099 CJE_1405
CJEJ192222 CJ1269C
CHOM360107 CHAB381_1278
CFET360106 CFF8240_1209
CFEL264202 CF0631
CCUR360105 CCV52592_0486
CCON360104 CCC13826_0497
CABO218497 CAB364
BXEN266265
BTUR314724
BTHE226186 BT_2141
BLON206672 BL1409
BHER314723
BGAR290434
BFRA295405 BF3823
BFRA272559 BF3615
BBUR224326
BAPH372461 BCC_371
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557
AMAR234826 AM332
ALAI441768
AFUL224325
ABUT367737 ABU_0642


Organism features enriched in list (features available for 169 out of the 177 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000548519112
Arrangment:Singles 0.001640198286
Arrangment:Tetrads 0.006883744
Disease:Pharyngitis 0.008017868
Disease:bronchitis_and_pneumonitis 0.008017868
Endospores:No 5.805e-787211
GC_Content_Range4:0-40 8.579e-1196213
GC_Content_Range4:40-60 0.009091254224
GC_Content_Range4:60-100 5.709e-818145
GC_Content_Range7:0-30 3.780e-62847
GC_Content_Range7:30-40 0.000032268166
GC_Content_Range7:50-60 0.000280717107
GC_Content_Range7:60-70 2.648e-815134
Genome_Size_Range5:0-2 1.028e-36108155
Genome_Size_Range5:4-6 3.191e-256184
Genome_Size_Range5:6-10 0.0000701347
Genome_Size_Range9:0-1 9.391e-82127
Genome_Size_Range9:1-2 4.414e-2687128
Genome_Size_Range9:4-5 2.766e-12396
Genome_Size_Range9:5-6 5.741e-11388
Genome_Size_Range9:6-8 0.0001868238
Gram_Stain:Gram_Neg 0.000014074333
Gram_Stain:Gram_Pos 0.000170927150
Habitat:Host-associated 0.007604771206
Habitat:Multiple 5.138e-630178
Habitat:Specialized 0.00062192653
Habitat:Terrestrial 0.0015650231
Motility:Yes 0.000063457267
Optimal_temp.:85 0.006883744
Oxygen_Req:Aerobic 0.008823643185
Oxygen_Req:Anaerobic 0.000140045102
Oxygen_Req:Facultative 0.000013537201
Oxygen_Req:Microaerophilic 0.00070631218
Pathogenic_in:Animal 0.0004000866
Pathogenic_in:Human 0.002452848213
Shape:Irregular_coccus 3.916e-71517
Shape:Pleomorphic 0.008017868
Shape:Rod 4.507e-1854347
Shape:Sphere 5.535e-71619
Shape:Spiral 3.267e-82534
Temp._range:Hyperthermophilic 6.074e-61723
Temp._range:Mesophilic 0.0001114121473
Temp._range:Thermophilic 0.00584091735



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462210.6928
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002410.6430
PWY-5918 (heme biosynthesis I)2722240.6230
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181940.6168
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951800.6123
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862280.6034
PWY-1269 (CMP-KDO biosynthesis I)3252460.5997
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912280.5875
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962290.5782
TYRFUMCAT-PWY (tyrosine degradation I)1841680.5743
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491460.5724
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251910.5703
PWY-4041 (γ-glutamyl cycle)2792180.5613
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902220.5520
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482480.5462
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831630.5432
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162750.5418
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392420.5331
PWY-5028 (histidine degradation II)1301280.5291
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222740.5196
PWY-5913 (TCA cycle variation IV)3012210.5112
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911630.5104
DAPLYSINESYN-PWY (lysine biosynthesis I)3422380.4987
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982610.4942
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262300.4937
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911600.4894
AST-PWY (arginine degradation II (AST pathway))1201160.4857
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551940.4845
PWY-5340 (sulfate activation for sulfonation)3852540.4827
PWY-5386 (methylglyoxal degradation I)3052180.4796
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491890.4720
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491890.4720
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292280.4720
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761480.4659
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652430.4658
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561350.4575
VALDEG-PWY (valine degradation I)2902070.4552
PWY0-862 (cis-dodecenoyl biosynthesis)3432310.4505
PROSYN-PWY (proline biosynthesis I)4752830.4504
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002110.4500
PWY0-501 (lipoate biosynthesis and incorporation I)3852490.4496
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112160.4485
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96950.4440
GLUCONSUPER-PWY (D-gluconate degradation)2291740.4422
REDCITCYC (TCA cycle variation II)1741420.4313
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081610.4308
GLYOXYLATE-BYPASS (glyoxylate cycle)1691390.4305
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121040.4298
PWY-5148 (acyl-CoA hydrolysis)2271710.4293
GALACTARDEG-PWY (D-galactarate degradation I)1511280.4276
PWY-5194 (siroheme biosynthesis)3122130.4262
PWY-561 (superpathway of glyoxylate cycle)1621340.4238
ARO-PWY (chorismate biosynthesis I)5102900.4185
P344-PWY (acrylonitrile degradation)2101600.4166
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2902010.4166
PWY-5938 ((R)-acetoin biosynthesis I)3762400.4153
GALACTCAT-PWY (D-galactonate degradation)104970.4147
P601-PWY (D-camphor degradation)95910.4144
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2892000.4132
GLUTAMINDEG-PWY (glutamine degradation I)1911490.4127
PWY-5188 (tetrapyrrole biosynthesis I)4392650.4126
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582720.4125
PWY-3162 (tryptophan degradation V (side chain pathway))94900.4114
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351160.4099
GLUCARDEG-PWY (D-glucarate degradation I)1521260.4082
KDOSYN-PWY (KDO transfer to lipid IVA I)1801420.4069
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791410.4038
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381170.4035
LIPASYN-PWY (phospholipases)2121590.4025
FAO-PWY (fatty acid β-oxidation I)4572700.4006
PWY-6196 (serine racemization)102940.4000



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11281   EG10595   EG10438   EG10437   
EG113630.999660.9995550.9994480.999393
EG112810.9998930.9997060.999353
EG105950.9998850.999736
EG104380.999961
EG10437



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PAIRWISE BLAST SCORES:

  EG11363   EG11281   EG10595   EG10438   EG10437   
EG113630.0f0----
EG11281-0.0f0---
EG10595--0.0f0--
EG10438---0.0f0-
EG10437----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10437 EG10438 EG10595 EG11281 EG11363 (centered at EG10595)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11363   EG11281   EG10595   EG10438   EG10437   
308/623415/623410/623332/623394/623
AAEO224324:0:Tyes1111-6690-
AAUR290340:2:Tyes--0-3
AAVE397945:0:Tyes1160135136
ABAC204669:0:Tyes02079343732143213
ABAU360910:0:Tyes71016211620
ABOR393595:0:Tyes43210
ABUT367737:0:Tyes0----
ACAU438753:0:Tyes12450182693692
ACEL351607:0:Tyes--2-0
ACRY349163:8:Tyes14070-11351134
ADEH290397:0:Tyes150615271317-0
AEHR187272:0:Tyes01234
AFER243159:0:Tyes0417416455454
AHYD196024:0:Tyes01234
AMAR234826:0:Tyes-0---
AMAR329726:9:Tyes--1052-0
AMET293826:0:Tyes0552551550-
ANAE240017:0:Tyes--0-5
AORE350688:0:Tyes-210233
APLE416269:0:Tyes0863865866867
APLE434271:0:Tno0897899900901
ASAL382245:5:Tyes43210
ASP1667:3:Tyes--0-3
ASP232721:2:Tyes502051190191
ASP62928:0:Tyes3252233223801
ASP62977:0:Tyes-210574
ASP76114:2:Tyes222003747342341
AVAR240292:3:Tyes0-1052-369
BABO262698:0:Tno-0---
BABO262698:1:Tno0-441176175
BAMB339670:3:Tno20041011121111
BAMB398577:3:Tno18271010461045
BAMY326423:0:Tyes-02425-
BANT260799:0:Tno-1911185418530
BANT261594:2:Tno-1892183518340
BANT568206:2:Tyes-063642027
BANT592021:2:Tno-2021195819570
BAPH198804:0:Tyes60---
BAPH372461:0:Tyes--0--
BBAC264462:0:Tyes1057-0-249
BBAC360095:0:Tyes163527-01
BBRO257310:0:Tyes90290490510
BCAN483179:0:Tno-0---
BCAN483179:1:Tno0-478198197
BCEN331271:0:Tno---0-
BCEN331271:2:Tno169710--
BCEN331272:3:Tyes17961010411040
BCER226900:1:Tyes-56540
BCER288681:0:Tno-61760
BCER315749:1:Tyes-34760
BCER405917:1:Tyes-66760
BCER572264:1:Tno-68760
BCIC186490:0:Tyes54310
BCLA66692:0:Tyes1276310-
BFRA272559:1:Tyes0----
BFRA295405:0:Tno0----
BHAL272558:0:Tyes-310-
BHEN283166:0:Tyes5680-451452
BJAP224911:0:Fyes032142220190191
BLIC279010:0:Tyes9260293057
BLON206672:0:Tyes--0--
BMAL243160:1:Tno017201721852851
BMAL320388:1:Tno1521012891288
BMAL320389:1:Tyes020292030965964
BMEL224914:0:Tno-0---
BMEL224914:1:Tno452-0261262
BMEL359391:0:Tno-0---
BMEL359391:1:Tno0-425171170
BOVI236:0:Tyes-0---
BOVI236:1:Tyes0-387146145
BPAR257311:0:Tno73974174210
BPER257313:0:Tyes31017381737
BPET94624:0:Tyes41012041205
BPSE272560:1:Tyes019721973671672
BPSE320372:1:Tno02339234014111410
BPSE320373:1:Tno02262226312371236
BPUM315750:0:Tyes-0151625
BQUI283165:0:Tyes2930-244245
BSP107806:2:Tyes710--
BSP36773:2:Tyes20861012781277
BSP376:0:Tyes024541959329328
BSUB:0:Tyes7460282938
BSUI204722:0:Tyes-0---
BSUI204722:1:Tyes0-461190189
BSUI470137:0:Tno-0---
BSUI470137:1:Tno0-473203202
BTHA271848:1:Tno059058914851486
BTHE226186:0:Tyes0----
BTHU281309:1:Tno-56650
BTHU412694:1:Tno-59760
BTRI382640:1:Tyes7990-923922
BVIE269482:7:Tyes19131010031002
BWEI315730:4:Tyes-67760
CABO218497:0:Tyes0----
CACE272562:1:Tyes-210457
CAULO:0:Tyes11990142510681069
CBEI290402:0:Tyes02344234323423961
CBLO203907:0:Tyes0-1-2
CBLO291272:0:Tno0-123
CBOT36826:1:Tno--10-
CBOT441770:0:Tyes-210-
CBOT441771:0:Tno-210-
CBOT441772:1:Tno-210-
CBOT498213:1:Tno-2101371
CBOT508765:1:Tyes-8078068050
CBOT515621:2:Tyes-210-
CBOT536232:0:Tno-210-
CBUR227377:1:Tyes797776-0
CBUR360115:1:Tno023-87
CBUR434922:2:Tno134132131-0
CCAV227941:1:Tyes109---0
CCHL340177:0:Tyes0701328-1106
CCON360104:2:Tyes0----
CCUR360105:0:Tyes0----
CDES477974:0:Tyes943023534
CDIF272563:1:Tyes2012-121712160
CDIP257309:0:Tyes--4-0
CEFF196164:0:Fyes--5-0
CFEL264202:1:Tyes0----
CFET360106:0:Tyes0----
CGLU196627:0:Tyes--4-0
CHOM360107:1:Tyes0----
CHUT269798:0:Tyes72902718-3767
CHYD246194:0:Tyes--10-
CJAP155077:0:Tyes43210
CJEI306537:0:Tyes--3-0
CJEJ192222:0:Tyes0----
CJEJ195099:0:Tno0----
CJEJ354242:2:Tyes0----
CJEJ360109:0:Tyes0----
CJEJ407148:0:Tno0----
CKLU431943:1:Tyes-012-
CMIC31964:2:Tyes----0
CMIC443906:2:Tyes----0
CMUR243161:1:Tyes0---116
CNOV386415:0:Tyes--01-
CPER195102:1:Tyes-012809
CPER195103:0:Tno--01834
CPER289380:3:Tyes--01741
CPHY357809:0:Tyes--1824-0
CPRO264201:0:Fyes-01130-1660
CPSY167879:0:Tyes01234
CRUT413404:0:Tyes--514-0
CSAL290398:0:Tyes01234
CSP501479:7:Fyes-0---
CSP501479:8:Fyes972--01
CSP78:2:Tyes015197913738
CTEP194439:0:Tyes01946909-1310
CTET212717:0:Tyes--0-843
CTRA471472:0:Tyes0---114
CTRA471473:0:Tno0---114
CVES412965:0:Tyes--0--
CVIO243365:0:Tyes25390209222452244
DARO159087:0:Tyes7018519210
DDES207559:0:Tyes-31381428-0
DETH243164:0:Tyes-4354-0
DGEO319795:1:Tyes--0--
DHAF138119:0:Tyes-310-
DNOD246195:0:Tyes0777778280281
DOLE96561:0:Tyes99401634--
DPSY177439:2:Tyes--0-1005
DRAD243230:3:Tyes--0--
DRED349161:0:Tyes14456256236220
DSHI398580:5:Tyes8220-12241223
DSP216389:0:Tyes-3564-0
DSP255470:0:Tno-37423-0
DVUL882:1:Tyes187601045-2738
ECAN269484:0:Tyes-0---
ECAR218491:0:Tyes43210
ECHA205920:0:Tyes-0---
ECOL199310:0:Tno01234
ECOL316407:0:Tno01234
ECOL331111:6:Tno02345
ECOL362663:0:Tno01234
ECOL364106:1:Tno01234
ECOL405955:2:Tyes01234
ECOL409438:6:Tyes01234
ECOL413997:0:Tno01234
ECOL439855:4:Tno01234
ECOL469008:0:Tno43210
ECOL481805:0:Tno43210
ECOL585034:0:Tno01234
ECOL585035:0:Tno01234
ECOL585055:0:Tno01234
ECOL585056:2:Tno01234
ECOL585057:0:Tno01234
ECOL585397:0:Tno01234
ECOL83334:0:Tno01234
ECOLI:0:Tno01234
ECOO157:0:Tno01234
EFAE226185:3:Tyes-9470--
EFER585054:1:Tyes01234
ELIT314225:0:Tyes252560150149
ERUM254945:0:Tyes-0---
ERUM302409:0:Tno-0---
ESP42895:1:Tyes01234
FALN326424:0:Tyes--5-0
FJOH376686:0:Tyes43990--970
FMAG334413:1:Tyes-01--
FNOD381764:0:Tyes--1540-
FNUC190304:0:Tyes15466740--
FPHI484022:1:Tyes-0132913301331
FRANT:0:Tno-0127128129
FSP106370:0:Tyes--5-0
FSP1855:0:Tyes--0-3
FTUL351581:0:Tno-595012
FTUL393011:0:Tno-525012
FTUL393115:0:Tyes-0126127128
FTUL401614:0:Tyes-0471470469
FTUL418136:0:Tno-378210
FTUL458234:0:Tno-529012
GBET391165:0:Tyes01811200841842
GFOR411154:0:Tyes-1370-2463
GKAU235909:1:Tyes198605617
GMET269799:1:Tyes06386376361134
GOXY290633:5:Tyes12587846210-
GSUL243231:0:Tyes8079869859840
GTHE420246:1:Tyes-04516
GURA351605:0:Tyes14798608618620
GVIO251221:0:Tyes--0-904
HARS204773:0:Tyes310815816
HAUR316274:2:Tyes-741350-0
HCHE349521:0:Tyes53210
HDUC233412:0:Tyes0246245244243
HHAL349124:0:Tyes43210
HHEP235279:0:Tyes0----
HINF281310:0:Tyes012420-
HINF374930:0:Tyes3443433420-
HINF71421:0:Tno012328-
HMAR272569:8:Tyes-0---
HMOD498761:0:Tyes14711870
HMUK485914:1:Tyes-0---
HNEP81032:0:Tyes221458015291528
HPYL357544:1:Tyes0----
HPYL85963:0:Tno0----
HSAL478009:4:Tyes-0---
HSOM205914:1:Tyes0122322
HSOM228400:0:Tno49349449501
HSP64091:2:Tno-0---
HWAL362976:1:Tyes-0---
ILOI283942:0:Tyes01234
JSP290400:1:Tyes3011834-01
JSP375286:0:Tyes31016911690
KPNE272620:2:Tyes01234
KRAD266940:2:Fyes--3-0
LACI272621:0:Tyes-0---
LBIF355278:2:Tyes---0-
LBIF456481:2:Tno---0-
LBOR355276:1:Tyes01521-1243-
LBOR355277:1:Tno769461-0-
LBRE387344:2:Tyes--0--
LCAS321967:1:Tyes-0---
LCHO395495:0:Tyes4016017631762
LDEL321956:0:Tyes-0---
LDEL390333:0:Tyes-0---
LGAS324831:0:Tyes-0---
LHEL405566:0:Tyes-0---
LINN272626:1:Tno-10901-
LINT189518:1:Tyes22770-344-
LINT267671:1:Tno01741-1477-
LINT363253:3:Tyes-3450--
LJOH257314:0:Tyes-0---
LLAC272622:5:Tyes-0---
LLAC272623:0:Tyes-0---
LMES203120:1:Tyes-0---
LMON169963:0:Tno-11001-
LMON265669:0:Tyes-11201-
LPLA220668:0:Tyes-6260--
LPNE272624:0:Tno26832682268101
LPNE297245:1:Fno26122611261001
LPNE297246:1:Fyes27432742274101
LPNE400673:0:Tno42242342401
LREU557436:0:Tyes-0710--
LSAK314315:0:Tyes-0---
LSPH444177:1:Tyes212104-2603
LWEL386043:0:Tyes-11101-
LXYL281090:0:Tyes----0
MABS561007:1:Tyes--2-0
MACE188937:0:Tyes-0---
MAER449447:0:Tyes5216-0-2129
MAQU351348:2:Tyes43210
MAVI243243:0:Tyes--2-0
MBAR269797:1:Tyes-0---
MBOV233413:0:Tno--2-0
MBOV410289:0:Tno--2-0
MBUR259564:0:Tyes-0---
MCAP243233:0:Tyes0377376657656
MEXT419610:0:Tyes99916010170171
MFLA265072:0:Tyes034208207
MGIL350054:3:Tyes--2-0
MLEP272631:0:Tyes----0
MLOT266835:2:Tyes06399988149150
MMAG342108:0:Tyes8662044113401
MMAR394221:0:Tyes68001404831832
MMAZ192952:0:Tyes-0---
MPET420662:1:Tyes37414410
MSME246196:0:Tyes--0-2
MSP164756:1:Tno--0-2
MSP164757:0:Tno--0-2
MSP189918:2:Tyes--0-2
MSP266779:3:Tyes12800131311841183
MSP400668:0:Tyes43210
MSP409:2:Tyes07653319596
MSUC221988:0:Tyes01234
MTBCDC:0:Tno--2-0
MTBRV:0:Tno--2-0
MTHE264732:0:Tyes0581582583-
MTHE349307:0:Tyes-0---
MTUB336982:0:Tno--2-0
MTUB419947:0:Tyes--2-0
MVAN350058:0:Tyes----0
MXAN246197:0:Tyes243125682282-0
NARO279238:0:Tyes395203-01
NEUR228410:0:Tyes010971339636635
NEUT335283:2:Tyes149414270567568
NFAR247156:2:Tyes--3-0
NGON242231:0:Tyes10683895630339
NHAM323097:2:Tyes012918821819
NMEN122586:0:Tno0950469287571
NMEN122587:0:Tyes10206421640443
NMEN272831:0:Tno8445761910407
NMEN374833:0:Tno9626331630437
NMUL323848:3:Tyes242010460354353
NOCE323261:1:Tyes10221822172216
NPHA348780:2:Tyes-0---
NSP103690:6:Tyes0-5226-3804
NSP35761:1:Tyes--6-0
NSP387092:0:Tyes0----
NWIN323098:0:Tyes276111590701
OANT439375:4:Tyes-0---
OANT439375:5:Tyes478-0416415
OCAR504832:0:Tyes70219540816817
OIHE221109:0:Tyes-02316
OTSU357244:0:Fyes-0---
PACN267747:0:Tyes--0-2
PAER208963:0:Tyes43210
PAER208964:0:Tno43210
PARC259536:0:Tyes--5645650
PATL342610:0:Tyes01234
PCAR338963:0:Tyes214012753
PCRY335284:1:Tyes--109410930
PDIS435591:0:Tyes15800--900
PENT384676:0:Tyes43210
PFLU205922:0:Tyes01234
PFLU216595:1:Tyes01234
PFLU220664:0:Tyes01234
PGIN242619:0:Tyes5610--1282
PHAL326442:1:Tyes01234
PING357804:0:Tyes43210
PINT246198:1:Tyes19100---
PLUM243265:0:Fyes43210
PLUT319225:0:Tyes8727810-172
PMAR167539:0:Tyes--0--
PMAR167555:0:Tyes--0--
PMAR59920:0:Tno--0--
PMAR74547:0:Tyes--0--
PMEN399739:0:Tyes01234
PMOB403833:0:Tyes--01-
PMUL272843:1:Tyes01234
PNAP365044:8:Tyes1520726727
PPEN278197:0:Tyes-0---
PPRO298386:2:Tyes43210
PPUT160488:0:Tno43210
PPUT351746:0:Tyes43210
PPUT76869:0:Tno43210
PRUM264731:0:Tyes-0---
PSP117:0:Tyes-36450-3144
PSP296591:2:Tyes60361361610
PSP312153:0:Tyes0-1185710709
PSP56811:2:Tyes--011057
PSTU379731:0:Tyes43210
PSYR205918:0:Tyes01234
PSYR223283:2:Tyes43210
PTHE370438:0:Tyes-023787
RAKA293614:0:Fyes-0---
RALB246199:0:Tyes-012-
RBEL336407:0:Tyes-0---
RBEL391896:0:Fno-0---
RCAN293613:0:Fyes-0---
RCAS383372:0:Tyes-04151-3000
RCON272944:0:Tno-0---
RDEN375451:4:Tyes20160-19531952
RETL347834:5:Tyes7930192611001101
REUT264198:3:Tyes02204220514951494
REUT381666:2:Tyes02399240017091708
RFEL315456:2:Tyes-0---
RFER338969:1:Tyes176817730767766
RLEG216596:6:Tyes8310233013761377
RMAS416276:1:Tyes-0---
RMET266264:2:Tyes02369237015681567
RPAL258594:0:Tyes42023590571572
RPAL316055:0:Tyes1543075813271328
RPAL316056:0:Tyes14660186811931194
RPAL316057:0:Tyes35019550505506
RPAL316058:0:Tyes136130347110
RPOM246200:1:Tyes4921250-10
RPRO272947:0:Tyes-0---
RRIC392021:0:Fno-0---
RRIC452659:0:Tyes-0---
RRUB269796:1:Tyes16772472012131214
RSAL288705:0:Tyes----0
RSOL267608:1:Tyes13451369137001
RSP101510:3:Fyes--0-3
RSP357808:0:Tyes-2186993-0
RSPH272943:4:Tyes1781339-10
RSPH349101:2:Tno1781322-10
RSPH349102:5:Tyes3621432-01
RTYP257363:0:Tno-0---
RXYL266117:0:Tyes-0---
SACI56780:0:Tyes0880879-1587
SAGA205921:0:Tno-720--0
SAGA208435:0:Tno-873--0
SAGA211110:0:Tyes-761--0
SALA317655:1:Tyes19273672020-
SARE391037:0:Tyes--0-4
SAUR158878:1:Tno-078-
SAUR158879:1:Tno-078-
SAUR196620:0:Tno-078-
SAUR273036:0:Tno--01-
SAUR282458:0:Tno-078-
SAUR282459:0:Tno-078-
SAUR359786:1:Tno--01-
SAUR359787:1:Tno-067-
SAUR367830:3:Tno-067-
SAUR418127:0:Tyes-078-
SAUR426430:0:Tno-067-
SAUR93061:0:Fno-067-
SAUR93062:1:Tno-078-
SAVE227882:1:Fyes--5-0
SBAL399599:3:Tyes43210
SBAL402882:1:Tno43210
SBOY300268:1:Tyes43210
SCO:2:Fyes--0-5
SDEG203122:0:Tyes43210
SDEN318161:0:Tyes43210
SDYS300267:1:Tyes43210
SELO269084:0:Tyes--0-43
SENT209261:0:Tno01234
SENT220341:0:Tno01234
SENT295319:0:Tno01234
SENT321314:2:Tno01234
SENT454169:2:Tno01234
SEPI176279:1:Tyes-067-
SEPI176280:0:Tno-067-
SERY405948:0:Tyes--0-2
SFLE198214:0:Tyes01234
SFLE373384:0:Tno01234
SFUM335543:0:Tyes011771178-2429
SGLO343509:3:Tyes01234
SGOR29390:0:Tyes-1025--0
SHAE279808:0:Tyes-1110-
SHAL458817:0:Tyes43210
SHIGELLA:0:Tno01234
SLAC55218:1:Fyes11880-13331334
SLOI323850:0:Tyes01234
SMED366394:3:Tyes52701559661662
SMEL266834:2:Tyes52001327660661
SMUT210007:0:Tyes-583--0
SONE211586:1:Tyes01234
SPEA398579:0:Tno43210
SPNE1313:0:Tyes-0--411
SPNE170187:0:Tyes-0--485
SPNE171101:0:Tno-0--430
SPNE487213:0:Tno-0--466
SPNE487214:0:Tno-0--470
SPNE488221:0:Tno----0
SPRO399741:1:Tyes01234
SPYO160490:0:Tno-950--0
SPYO186103:0:Tno-1008--0
SPYO193567:0:Tno-597--0
SPYO198466:0:Tno-1170--0
SPYO286636:0:Tno-1076--0
SPYO293653:0:Tno-1090--0
SPYO319701:0:Tyes-1094--0
SPYO370551:0:Tno-1050--0
SPYO370552:0:Tno-1107--0
SPYO370553:0:Tno-1058--0
SPYO370554:0:Tyes-1095--0
SRUB309807:1:Tyes9762090-892
SSAP342451:2:Tyes-810-
SSED425104:0:Tyes01234
SSON300269:1:Tyes01234
SSP1131:0:Tyes--0--
SSP1148:0:Tyes0-334-251
SSP292414:2:Tyes7770-12751274
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