CANDIDATE ID: 229

CANDIDATE ID: 229

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9968650e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG10790 (purA) (b4177)
   Products of gene:
     - ADENYLOSUCCINATE-SYN-MONOMER (PurA)
     - ADENYLOSUCCINATE-SYN-DIMER (adenylosuccinate synthetase)
       Reactions:
        L-aspartate + inosine-5'-phosphate + GTP  ->  adenylo-succinate + phosphate + GDP + 2 H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         P121-PWY (P121-PWY)
         PWY-841 (PWY-841)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10438 (hfq) (b4172)
   Products of gene:
     - EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
     - CPLX0-1461 (HF-I, host factor for RNA phage Q β replication)

- EG10437 (hflX) (b4173)
   Products of gene:
     - EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
       Reactions:
        GTP + H2O  ->  GDP + phosphate + H+

- EG10436 (hflK) (b4174)
   Products of gene:
     - EG10436-MONOMER (regulator of FtsH protease)
     - CPLX0-1321 (HflK-HflC complex; regulator of FtsH protease)
     - CPLX0-2982 (HflB, integral membrane ATP-dependent zinc metallopeptidase)
       Reactions:
        EC# 3.4.24.-

- EG10435 (hflC) (b4175)
   Products of gene:
     - EG10435-MONOMER (regulator of FtsH protease)
     - CPLX0-1321 (HflK-HflC complex; regulator of FtsH protease)
     - CPLX0-2982 (HflB, integral membrane ATP-dependent zinc metallopeptidase)
       Reactions:
        EC# 3.4.24.-



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 280
Effective number of orgs (counting one per cluster within 468 clusters): 194

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP28240 Thermotoga sp.4
TPET390874 ncbi Thermotoga petrophila RKU-14
TMAR243274 ncbi Thermotoga maritima MSB84
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STRO369723 ncbi Salinispora tropica CNB-4404
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SARE391037 ncbi Salinispora arenicola CNS-2054
SALA317655 ncbi Sphingopyxis alaskensis RB22564
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.4
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NSP35761 Nocardioides sp.4
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NHAM323097 ncbi Nitrobacter hamburgensis X145
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16224
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HNEP81032 Hyphomonas neptunium5
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
ESP42895 Enterobacter sp.5
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)4
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT4
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CJAP155077 Cellvibrio japonicus5
CDIF272563 ncbi Clostridium difficile 6304
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBLO203907 ncbi Candidatus Blochmannia floridanus4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTRI382640 ncbi Bartonella tribocorum CIP 1054765
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BQUI283165 ncbi Bartonella quintana Toulouse5
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-15
BHAL272558 ncbi Bacillus halodurans C-1254
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5835
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
ANAE240017 Actinomyces oris MG14
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  EG10790   EG10438   EG10437   EG10436   EG10435   
YPSE349747 YPSIP31758_3648YPSIP31758_3653YPSIP31758_3652YPSIP31758_3651YPSIP31758_3650
YPSE273123 YPTB0430YPTB0425YPTB0426YPTB0427YPTB0428
YPES386656 YPDSF_3596YPDSF_3601YPDSF_3600YPDSF_3599YPDSF_3598
YPES377628 YPN_3293YPN_3298YPN_3297YPN_3296YPN_3295
YPES360102 YPA_3906YPA_3911YPA_3910YPA_3909YPA_3908
YPES349746 YPANGOLA_A0694YPANGOLA_A0699YPANGOLA_A0698YPANGOLA_A0697YPANGOLA_A0696
YPES214092 YPO0378YPO0373YPO0374YPO0375YPO0376
YPES187410 Y0635Y0630Y0632Y0633Y0634
YENT393305 YE0382YE0377YE0378YE0379YE0380
XORY360094 XOOORF_4487XOOORF_1721XOOORF_1722XOOORF_4490XOOORF_4489
XORY342109 XOO0840XOO2798XOO2797XOO0837XOO0838
XORY291331 XOO0915XOO2946XOO2945XOO0912XOO0913
XFAS405440 XFASM12_1784XFASM12_0070XFASM12_0069XFASM12_1787XFASM12_1786
XFAS183190 PD_1627PD_0066PD_0065PD_1630PD_1629
XFAS160492 XF0455XF0089XF0088XF0452XF0453
XCAM487884 XCC-B100_3290XCC-B100_2543XCC-B100_2542XCC-B100_3294XCC-B100_3293
XCAM316273 XCAORF_1257XCAORF_1952XCAORF_1953XCAORF_1254XCAORF_1255
XCAM314565 XC_3193XC_2515XC_2514XC_3196XC_3195
XCAM190485 XCC1053XCC1716XCC1717XCC1050XCC1051
XAXO190486 XAC1158XAC1735XAC1736XAC1155XAC1156
XAUT78245 XAUT_0037XAUT_4393XAUT_4392XAUT_1664XAUT_3385
VVUL216895 VV1_1299VV1_1294VV1_1295VV1_1296VV1_1297
VVUL196600 VV3066VV3071VV3070VV3069VV3068
VPAR223926 VP2812VP2817VP2816VP2815VP2814
VFIS312309 VF2318VF2323VF2322VF2321VF2320
VEIS391735 VEIS_0075VEIS_0074VEIS_0073VEIS_0072
VCHO345073 VC0395_A2180VC0395_A2758VC0395_A2759VC0395_A2760VC0395_A2761
VCHO VC2602VC0347VC0348VC0349VC0350
TTUR377629 TERTU_3551TERTU_3558TERTU_3557TERTU_3556TERTU_3554
TTEN273068 TTE2696TTE1360TTE1127TTE0384
TSP28240 TRQ2_0411TRQ2_0410TRQ2_0999TRQ2_0998
TPET390874 TPET_0395TPET_0394TPET_1107TPET_1108
TMAR243274 TM_0526TM_0527TM_1822TM_1823
TDEN292415 TBD_0607TBD_1533TBD_0602TBD_0603TBD_0604
TCRU317025 TCR_1094TCR_1086TCR_1087TCR_1090TCR_1091
STYP99287 STM4366STM4361STM4362STM4363STM4364
STRO369723 STROP_0133STROP_1449STROP_3018STROP_3018
STHE292459 STH1746STH2123STH1977STH1976
SSP94122 SHEWANA3_0695SHEWANA3_0597SHEWANA3_0598SHEWANA3_0599SHEWANA3_0600
SSP644076 SCH4B_1764SCH4B_2287SCH4B_2288SCH4B_1779SCH4B_1780
SSP292414 TM1040_1969TM1040_1356TM1040_1355TM1040_1956TM1040_1955
SSON300269 SSO_4362SSO_4357SSO_4358SSO_4359SSO_4360
SSED425104 SSED_0750SSED_0797SSED_0798SSED_0799SSED_0800
SPRO399741 SPRO_0436SPRO_0431SPRO_0432SPRO_0433SPRO_0434
SPEA398579 SPEA_3592SPEA_3540SPEA_3539SPEA_3538SPEA_3537
SONE211586 SO_3937SO_0603SO_0604SO_0605SO_0606
SMEL266834 SMC00643SMC01048SMC01049SMC01441SMC01440
SMED366394 SMED_2616SMED_1095SMED_1096SMED_2018SMED_2017
SLOI323850 SHEW_3291SHEW_0566SHEW_0567SHEW_0568SHEW_0569
SLAC55218 SL1157_2333SL1157_2690SL1157_2691SL1157_2344SL1157_2345
SHIGELLA PURAHFQHFLXHFLKHFLC
SHAL458817 SHAL_3680SHAL_3634SHAL_3633SHAL_3632SHAL_3631
SGLO343509 SG0342SG0337SG0338SG0339SG0340
SFUM335543 SFUM_1271SFUM_3183SFUM_0184SFUM_0185
SFLE373384 SFV_4335SFV_4330SFV_4331SFV_4332SFV_4333
SFLE198214 AAN45749.1AAN45744.1AAN45745.1AAN45746.1AAN45747.1
SERY405948 SACE_7173SACE_1754SACE_2493SACE_2493
SENT454169 SEHA_C4784SEHA_C4779SEHA_C4780SEHA_C4781SEHA_C4782
SENT321314 SCH_4242SCH_4237SCH_4238SCH_4239SCH_4240
SENT295319 SPA4183SPA4178SPA4179SPA4180SPA4181
SENT220341 STY4723STY4718STY4719STY4720STY4721
SENT209261 T4417T4412T4413T4414T4415
SDYS300267 SDY_4412SDY_4417SDY_4416SDY_4415SDY_4414
SDEN318161 SDEN_0509SDEN_3205SDEN_3204SDEN_3203SDEN_3202
SDEG203122 SDE_2661SDE_2667SDE_2666SDE_2665SDE_2664
SCO SCO3629SCO5796SCO1796SCO7227
SBOY300268 SBO_4279SBO_4284SBO_4283SBO_4282SBO_4281
SBAL402882 SHEW185_0705SHEW185_3767SHEW185_3766SHEW185_3765SHEW185_3764
SBAL399599 SBAL195_0735SBAL195_3893SBAL195_3892SBAL195_3891SBAL195_3890
SARE391037 SARE_0139SARE_1407SARE_3244SARE_3244
SALA317655 SALA_0510SALA_1272SALA_2249SALA_2248
RSPH349102 RSPH17025_0875RSPH17025_1493RSPH17025_1494RSPH17025_0885RSPH17025_0886
RSPH349101 RSPH17029_2010RSPH17029_1451RSPH17029_1450RSPH17029_2001RSPH17029_2000
RSPH272943 RSP_0366RSP_2843RSP_2844RSP_0357RSP_0356
RSOL267608 RSC1226RSC1220RSC1221RSC1222RSC1223
RRUB269796 RRU_A1106RRU_A1684RRU_A1685RRU_A2203RRU_A2202
RPOM246200 SPO_1318SPO_2081SPO_2080SPO_1329SPO_1330
RPAL316058 RPB_1330RPB_2878RPB_2877RPB_2038RPB_2039
RPAL316057 RPD_3894RPD_2594RPD_2595RPD_3352RPD_3351
RPAL316056 RPC_4086RPC_2582RPC_2583RPC_3262RPC_3261
RPAL316055 RPE_4141RPE_2762RPE_2763RPE_2178RPE_2179
RPAL258594 RPA4295RPA2597RPA2598RPA3491RPA3490
RMET266264 RMET_2096RMET_2101RMET_2100RMET_2099RMET_2098
RLEG216596 RL3768RL2284RL2285RL3254RL3253
RFER338969 RFER_2302RFER_2301RFER_2300RFER_2299
REUT381666 H16_A2354H16_A2359H16_A2358H16_A2357H16_A2356
REUT264198 REUT_A2076REUT_A2081REUT_A2080REUT_A2079REUT_A2078
RETL347834 RHE_CH03344RHE_CH01954RHE_CH01955RHE_CH02797RHE_CH02796
RDEN375451 RD1_1912RD1_2755RD1_2754RD1_1920RD1_1921
PSYR223283 PSPTO_4937PSPTO_4942PSPTO_4941PSPTO_4940PSPTO_4939
PSYR205918 PSYR_0577PSYR_0572PSYR_0573PSYR_0574PSYR_0575
PSTU379731 PST_3663PST_3668PST_3667PST_3666PST_3665
PSP56811 PSYCPRWF_1810PSYCPRWF_0821PSYCPRWF_1868PSYCPRWF_2364
PSP312153 PNUC_1281PNUC_1286PNUC_1285PNUC_1284PNUC_1283
PSP296591 BPRO_2597BPRO_2603BPRO_2602BPRO_2601BPRO_2600
PPUT76869 PPUTGB1_4941PPUTGB1_4946PPUTGB1_4945PPUTGB1_4944PPUTGB1_4943
PPUT351746 PPUT_4765PPUT_4770PPUT_4769PPUT_4768PPUT_4767
PPUT160488 PP_4889PP_4894PP_4893PP_4892PP_4891
PPRO298386 PBPRA3345PBPRA3350PBPRA3349PBPRA3348PBPRA3347
PNAP365044 PNAP_1883PNAP_1877PNAP_1878PNAP_1879PNAP_1880
PMUL272843 PM0938PM0906PM0907PM0117PM0118
PMEN399739 PMEN_0641PMEN_0635PMEN_0636PMEN_0637PMEN_0638
PLUM243265 PLU4577PLU4581PLU4580PLU4579PLU4578
PING357804 PING_3234PING_3238PING_3237PING_3236PING_3235
PHAL326442 PSHAA0275PSHAA0271PSHAA0272PSHAA0273PSHAA0274
PFLU220664 PFL_0571PFL_0566PFL_0567PFL_0568PFL_0569
PFLU216595 PFLU0525PFLU0520PFLU0521PFLU0522PFLU0523
PFLU205922 PFL_0528PFL_0523PFL_0524PFL_0525PFL_0526
PENT384676 PSEEN4938PSEEN4943PSEEN4942PSEEN4941PSEEN4940
PCRY335284 PCRYO_0645PCRYO_1493PCRYO_0396PCRYO_2451
PCAR338963 PCAR_0203PCAR_1306PCAR_2043PCAR_2262PCAR_2263
PATL342610 PATL_0215PATL_3978PATL_3979PATL_3980PATL_3981
PARC259536 PSYC_0677PSYC_0921PSYC_0355PSYC_2127
PAER208964 PA4938PA4944PA4943PA4942PA4941
PAER208963 PA14_65230PA14_65310PA14_65300PA14_65280PA14_65270
OCAR504832 OCAR_7155OCAR_6100OCAR_6101OCAR_5278OCAR_5279
OANT439375 OANT_1231OANT_2208OANT_2207OANT_1794OANT_1795
NWIN323098 NWI_2965NWI_1449NWI_1450NWI_2349NWI_2348
NSP35761 NOCA_4344NOCA_3837NOCA_2578NOCA_4867
NOCE323261 NOC_2585NOC_2590NOC_2589NOC_2588NOC_2587
NMUL323848 NMUL_A0441NMUL_A0447NMUL_A0446NMUL_A0445NMUL_A0444
NHAM323097 NHAM_1123NHAM_1841NHAM_1842NHAM_2728NHAM_2727
NEUT335283 NEUT_0967NEUT_0961NEUT_0962NEUT_0963NEUT_0964
NEUR228410 NE1281NE1287NE1286NE1285NE1284
NARO279238 SARO_2683SARO_1931SARO_1932SARO_3333SARO_3332
MXAN246197 MXAN_2618MXAN_1356MXAN_3171MXAN_3172
MSUC221988 MS1621MS1518MS1519MS1619MS1620
MSP409 M446_6845M446_5942M446_5943M446_1089M446_1088
MSP400668 MMWYL1_2626MMWYL1_2632MMWYL1_2631MMWYL1_2630MMWYL1_2629
MSP266779 MESO_3159MESO_1613MESO_1612MESO_1749MESO_1748
MPET420662 MPE_A1985MPE_A1991MPE_A1990MPE_A1989MPE_A1988
MMAR394221 MMAR10_1448MMAR10_1449MMAR10_2024MMAR10_2023
MMAG342108 AMB3190AMB2372AMB2373AMB3489AMB3490
MLOT266835 MLL3873MLR0402MLR0403MLL1455MLL1454
MFLA265072 MFLA_1583MFLA_1589MFLA_1588MFLA_1587MFLA_1586
MEXT419610 MEXT_0999MEXT_2824MEXT_2825MEXT_2658MEXT_2657
MCAP243233 MCA_1978MCA_1983MCA_1982MCA_1981MCA_1980
MAQU351348 MAQU_2764MAQU_2769MAQU_2768MAQU_2767MAQU_2766
LSPH444177 BSPH_4762BSPH_4371BSPH_4114BSPH_4113
LPNE400673 LPC_2858LPC_0010LPC_0011LPC_2860LPC_2859
LPNE297246 LPP0550LPP0009LPP0010LPP0548LPP0549
LPNE297245 LPL0526LPL0009LPL0010LPL0524LPL0525
LPNE272624 LPG0486LPG0009LPG0010LPG0484LPG0485
LCHO395495 LCHO_2857LCHO_2863LCHO_2862LCHO_2861LCHO_2860
KPNE272620 GKPORF_B3936GKPORF_B3928GKPORF_B3929GKPORF_B3930GKPORF_B3931
JSP375286 MMA_2117MMA_2122MMA_2121MMA_2120MMA_2119
JSP290400 JANN_3179JANN_2244JANN_2245JANN_3173JANN_3172
ILOI283942 IL0337IL0333IL0334IL0335IL0336
HSOM228400 HSM_0287HSM_1074HSM_1075HSM_1785HSM_1784
HSOM205914 HS_1328HS_1105HS_1104HS_0487HS_0488
HNEP81032 HNE_3124HNE_2006HNE_2005HNE_0469HNE_0470
HINF71421 HI_1633HI_0411HI_0151HI_0150
HINF374930 CGSHIEE_05830CGSHIEE_00940CGSHIEE_02530CGSHIEE_02535
HINF281310 NTHI1407NTHI0535NTHI0239NTHI0237
HHAL349124 HHAL_0660HHAL_0666HHAL_0665HHAL_0664HHAL_0663
HDUC233412 HD_1807HD_0741HD_0740HD_1809HD_1808
HCHE349521 HCH_05377HCH_05383HCH_05382HCH_05381HCH_05380
HARS204773 HEAR1275HEAR1269HEAR1271HEAR1272HEAR1273
FTUL458234 FTA_0949FTA_0950FTA_0954FTA_0955
FTUL418136 FTW_1099FTW_1098FTW_1096FTW_1095
FTUL401614 FTN_1051FTN_1050FTN_1048FTN_1047
FTUL393115 FTF0630FTF0631FTF0633FTF0634
FTUL393011 FTH_0883FTH_0884FTH_0886FTH_0887
FTUL351581 FTL_0898FTL_0899FTL_0903FTL_0904
FRANT HFQHFLXHFLKHFLC
FPHI484022 FPHI_1538FPHI_1539FPHI_1542FPHI_1543
ESP42895 ENT638_0360ENT638_0355ENT638_0356ENT638_0357ENT638_0358
ELIT314225 ELI_01995ELI_06260ELI_06255ELI_11330ELI_11335
EFER585054 EFER_4230EFER_4225EFER_4226EFER_4227EFER_4228
ECOO157 PURAHFQHFLXHFLKHFLC
ECOL83334 ECS5153ECS5148ECS5149ECS5150ECS5151
ECOL585397 ECED1_4962ECED1_4957ECED1_4958ECED1_4959ECED1_4960
ECOL585057 ECIAI39_4642ECIAI39_4637ECIAI39_4638ECIAI39_4639ECIAI39_4640
ECOL585056 ECUMN_4710ECUMN_4705ECUMN_4706ECUMN_4707ECUMN_4708
ECOL585055 EC55989_4732EC55989_4727EC55989_4728EC55989_4729EC55989_4730
ECOL585035 ECS88_4763ECS88_4758ECS88_4759ECS88_4760ECS88_4761
ECOL585034 ECIAI1_4410ECIAI1_4405ECIAI1_4406ECIAI1_4407ECIAI1_4408
ECOL481805 ECOLC_3836ECOLC_3841ECOLC_3840ECOLC_3839ECOLC_3838
ECOL469008 ECBD_3857ECBD_3862ECBD_3861ECBD_3860ECBD_3859
ECOL439855 ECSMS35_4648ECSMS35_4643ECSMS35_4644ECSMS35_4645ECSMS35_4646
ECOL413997 ECB_04044ECB_04039ECB_04040ECB_04041ECB_04042
ECOL409438 ECSE_4474ECSE_4469ECSE_4470ECSE_4471ECSE_4472
ECOL405955 APECO1_2215APECO1_2219APECO1_2218APECO1_2217APECO1_2216
ECOL364106 UTI89_C4777UTI89_C4772UTI89_C4773UTI89_C4774UTI89_C4775
ECOL362663 ECP_4422ECP_4417ECP_4418ECP_4419ECP_4420
ECOL331111 ECE24377A_4736ECE24377A_4730ECE24377A_4731ECE24377A_4732ECE24377A_4733
ECOL316407 ECK4173:JW4135:B4177ECK4168:JW4130:B4172ECK4169:JW4131:B4173ECK4170:JW4132:B4174ECK4171:JW4133:B4175
ECOL199310 C5261C5256C5257C5258C5259
ECAR218491 ECA3929ECA3934ECA3933ECA3932ECA3931
DVUL882 DVU_3204DVU_3236DVU_0684DVU_0683
DSHI398580 DSHI_2742DSHI_1567DSHI_1566DSHI_2736DSHI_2735
DPSY177439 DP1480DP2918DP1092DP1091
DNOD246195 DNO_0600DNO_0595DNO_0596DNO_0597DNO_0598
DDES207559 DDE_0176DDE_0376DDE_2946DDE_2947
DARO159087 DARO_2974DARO_2980DARO_2979DARO_2978DARO_2977
CVIO243365 CV_3528CV_3533CV_3532CV_3531CV_3530
CSP78 CAUL_0658CAUL_2610CAUL_2611CAUL_3344CAUL_3345
CSP501479 CSE45_1077CSE45_1387CSE45_1388CSE45_1025CSE45_1026
CSAL290398 CSAL_1282CSAL_1277CSAL_1278CSAL_1279CSAL_1280
CRUT413404 RMAG_0531RMAG_0207RMAG_0534RMAG_0533
CPSY167879 CPS_0330CPS_0325CPS_0326CPS_0327CPS_0328
CPER289380 CPR_2641CPR_1174CPR_1927CPR_1132
CPER195103 CPF_2958CPF_1361CPF_2215CPF_1316
CPER195102 CPE2622CPE1158CPE1959CPE1060
CNOV386415 NT01CX_0905NT01CX_2108NT01CX_0101NT01CX_0101
CKLU431943 CKL_0087CKL_1577CKL_0994CKL_0994
CJAP155077 CJA_3073CJA_3079CJA_3078CJA_3077CJA_3076
CDIF272563 CD3655CD1974CD0788CD0881
CBOT536232 CLM_4121CLM_1954CLM_0641CLM_0641
CBOT515621 CLJ_B3955CLJ_B1975CLJ_B0616CLJ_B0616
CBOT508765 CLL_A3576CLL_A1816CLL_A1004CLL_A1091
CBOT498213 CLD_0858CLD_2843CLD_1460CLD_0210CLD_0210
CBOT441772 CLI_3861CLI_1792CLI_0618CLI_0618
CBOT441771 CLC_3615CLC_1739CLC_0463CLC_0463
CBOT441770 CLB_3709CLB_1732CLB_0579CLB_0579
CBOT36826 CBO3616CBO1797CBO0539CBO0539
CBLO291272 BPEN_086BPEN_082BPEN_083BPEN_084BPEN_085
CBLO203907 BFL083BFL080BFL081BFL082
CBEI290402 CBEI_5074CBEI_2563CBEI_4227CBEI_1046
CACE272562 CAC3593CAC1834CAC2299CAC1052CAC1052
BWEI315730 BCERKBAB4_5260BCERKBAB4_3478BCERKBAB4_3472BCERKBAB4_1924BCERKBAB4_1924
BVIE269482 BCEP1808_1728BCEP1808_1734BCEP1808_1733BCEP1808_1732BCEP1808_1731
BTRI382640 BT_0567BT_1323BT_1322BT_1566BT_1565
BTHU412694 BALH_4974BALH_3340BALH_3334BALH_1834BALH_1834
BTHU281309 BT9727_5148BT9727_3458BT9727_3452BT9727_1890BT9727_1890
BTHA271848 BTH_I2245BTH_I2239BTH_I2240BTH_I2241BTH_I2242
BSUI470137 BSUIS_B1158BSUIS_A1160BSUIS_A1159BSUIS_A1448BSUIS_A1447
BSUI204722 BR_1683BR_1111BR_1110BR_1397BR_1396
BSP376 BRADO5935BRADO3855BRADO3854BRADO5575BRADO5574
BSP36773 BCEP18194_A5102BCEP18194_A5108BCEP18194_A5107BCEP18194_A5106BCEP18194_A5105
BQUI283165 BQ02800BQ05340BQ05350BQ08610BQ08600
BPSE320373 BURPS668_2178BURPS668_2184BURPS668_2183BURPS668_2182BURPS668_2181
BPSE320372 BURPS1710B_A2545BURPS1710B_A2551BURPS1710B_A2550BURPS1710B_A2549BURPS1710B_A2548
BPSE272560 BPSL1524BPSL1518BPSL1519BPSL1520BPSL1521
BPET94624 BPET2031BPET2025BPET2026BPET2027BPET2028
BPER257313 BP2188BP2193BP2192BP2191BP2190
BPAR257311 BPP2844BPP2849BPP2848BPP2847BPP2846
BOVI236 GBOORF1691GBOORF1112GBOORF1111GBOORF1410GBOORF1409
BMEL359391 BAB1_1695BAB1_1134BAB1_1133BAB1_1416BAB1_1415
BMEL224914 BMEI0351BMEI0872BMEI0873BMEI0610BMEI0611
BMAL320389 BMA10247_1095BMA10247_1101BMA10247_1100BMA10247_1099BMA10247_1098
BMAL320388 BMASAVP1_A1823BMASAVP1_A1829BMASAVP1_A1828BMASAVP1_A1827BMASAVP1_A1826
BMAL243160 BMA_1333BMA_1340BMA_1339BMA_1338BMA_1337
BJAP224911 BLL7052BSR4491BLR4492BLL6509BLL6508
BHEN283166 BH03790BH07490BH07500BH10960BH10950
BHAL272558 BH4028BH2365BH3155BH3154
BCIC186490 BCI_0577BCI_0581BCI_0580BCI_0579BCI_0578
BCER572264 BCA_5622BCA_3803BCA_3797BCA_2145BCA_2145
BCER405917 BCE_5617BCE_3740BCE_3734BCE_2146BCE_2146
BCER315749 BCER98_4007BCER98_2390BCER98_2384BCER98_1560BCER98_1560
BCER288681 BCE33L5164BCE33L3472BCE33L3465BCE33L1880BCE33L1880
BCER226900 BC_5468BC_3713BC_3708BC_2057BC_2057
BCEN331272 BCEN2424_1801BCEN2424_1807BCEN2424_1806BCEN2424_1805BCEN2424_1804
BCEN331271 BCEN_6278BCEN_6272BCEN_6274BCEN_6275
BCAN483179 BCAN_A1721BCAN_A1130BCAN_A1129BCAN_A1429BCAN_A1428
BBRO257310 BB3165BB3170BB3169BB3168BB3167
BBAC360095 BARBAKC583_0285BARBAKC583_0624BARBAKC583_0625BARBAKC583_0924BARBAKC583_0923
BANT592021 BAA_5751BAA_3865BAA_1898BAA_2141BAA_2141
BANT568206 BAMEG_5768BAMEG_0791BAMEG_2763BAMEG_2516BAMEG_2516
BANT261594 GBAA5716GBAA3842GBAA1828GBAA2075GBAA2075
BANT260799 BAS5320BAS3559BAS1693BAS1928BAS1928
BAMB398577 BAMMC406_1712BAMMC406_1718BAMMC406_1717BAMMC406_1716BAMMC406_1715
BAMB339670 BAMB_1739BAMB_1745BAMB_1744BAMB_1743BAMB_1742
BABO262698 BRUAB1_1668BRUAB1_1117BRUAB1_1116BRUAB1_1392BRUAB1_1391
ASP76114 EBA1249EBA1255EBA1254EBA1253EBA1252
ASP62977 ACIAD1258ACIAD2373ACIAD3005ACIAD2967
ASP62928 AZO0938AZO0932AZO0933AZO0934AZO0935
ASP232721 AJS_1175AJS_1176AJS_1177AJS_1178
ASAL382245 ASA_3369ASA_3368ASA_3367ASA_3366
APLE434271 APJL_1091APJL_2008APJL_2009APJL_1093APJL_1092
APLE416269 APL_1075APL_1961APL_1962APL_1077APL_1076
ANAE240017 ANA_2615ANA_0425ANA_0582ANA_1141
AHYD196024 AHA_0924AHA_0925AHA_0926AHA_0927
AFER243159 AFE_1197AFE_1202AFE_1201AFE_1200AFE_1199
AEHR187272 MLG_0578MLG_0573MLG_0574MLG_0575MLG_0576
ADEH290397 ADEH_1265ADEH_0203ADEH_3522ADEH_3523
ACAU438753 AZC_4670AZC_3080AZC_3079AZC_2569AZC_2570
ABOR393595 ABO_2197ABO_2203ABO_2202ABO_2201ABO_2200
ABAU360910 BAV2333BAV2338BAV2337BAV2336BAV2335
AAVE397945 AAVE_1429AAVE_1430AAVE_1431AAVE_1432


Organism features enriched in list (features available for 257 out of the 280 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0005961117
Arrangment:Pairs 0.006824360112
Disease:Bubonic_plague 0.007100166
Disease:Dysentery 0.007100166
Endospores:No 1.236e-1745211
Endospores:Yes 0.00243153353
GC_Content_Range4:0-40 1.462e-1254213
GC_Content_Range4:40-60 0.0075597111224
GC_Content_Range4:60-100 3.451e-892145
GC_Content_Range7:30-40 7.152e-1139166
GC_Content_Range7:50-60 0.000057065107
GC_Content_Range7:60-70 1.857e-989134
Genome_Size_Range5:0-2 9.397e-2220155
Genome_Size_Range5:2-4 3.336e-759197
Genome_Size_Range5:4-6 2.603e-32146184
Genome_Size_Range5:6-10 0.00032853247
Genome_Size_Range9:0-1 0.0000238227
Genome_Size_Range9:1-2 4.200e-1618128
Genome_Size_Range9:2-3 3.007e-1122120
Genome_Size_Range9:4-5 5.719e-137496
Genome_Size_Range9:5-6 3.673e-157288
Genome_Size_Range9:6-8 0.00035092738
Gram_Stain:Gram_Neg 2.881e-25207333
Gram_Stain:Gram_Pos 1.606e-1132150
Habitat:Host-associated 0.000309372206
Habitat:Multiple 0.0000183101178
Habitat:Specialized 0.00040901253
Habitat:Terrestrial 0.00966232031
Motility:No 3.820e-1133151
Motility:Yes 1.592e-17168267
Optimal_temp.:- 0.0047519127257
Optimal_temp.:25-30 0.00003741719
Oxygen_Req:Aerobic 0.008775193185
Oxygen_Req:Anaerobic 0.000029127102
Oxygen_Req:Facultative 0.0003910107201
Pathogenic_in:Animal 0.00081444166
Shape:Coccus 5.040e-14782
Shape:Rod 4.320e-30218347
Shape:Sphere 0.0014880219
Shape:Spiral 0.0000308434
Temp._range:Hyperthermophilic 0.0011469323
Temp._range:Mesophilic 0.0023809221473
Temp._range:Psychrophilic 0.000580599
Temp._range:Thermophilic 2.849e-7235



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 161
Effective number of orgs (counting one per cluster within 468 clusters): 142

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPEN368408 ncbi Thermofilum pendens Hrk 51
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 71
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P21
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP357808 ncbi Roseiflexus sp. RS-11
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma0
PAER178306 ncbi Pyrobaculum aerophilum IM20
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71201
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT1
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A0
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GFOR411154 ncbi Gramella forsetii KT08031
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
EFAE226185 ncbi Enterococcus faecalis V5831
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BLON206672 ncbi Bifidobacterium longum NCC27051
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K11
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ABUT367737 ncbi Arcobacter butzleri RM40180


Names of the homologs of the genes in the group in each of these orgs
  EG10790   EG10438   EG10437   EG10436   EG10435   
WSUC273121 WS2056
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0767
TWHI203267 TW792
TVOL273116
TTHE300852
TTHE262724
TROS309801 TRD_0861
TPEN368408 TPEN_0832
TDEN326298
TACI273075
STOK273063 ST2208
SSUI391295 SSU05_1315
SSP84588
SSP64471
SSP387093
SSP1131
SSOL273057 SSO2195
SPYO370553 MGAS2096_SPY0795
SACI330779
RSP357808 ROSERS_2334
RCAS383372 RCAS_3144
RALB246199 GRAORF_1499
PTOR263820
PSP117 RB7008
PRUM264731 GFRORF1225
PPEN278197 PEPE_1345
PMAR93060
PMAR74547 PMT1261
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539 PRO_0506
PMAR146891
PLUT319225 PLUT_1355
PISL384616
PINT246198
PGIN242619 PG_1886
PFUR186497 PF1534
PDIS435591 BDI_3288
PAST100379
PAER178306
NSP387092
NSP103690 ALL3862
NPHA348780 NP1126A
MTHE349307 MTHE_1730
MSYN262723
MSTA339860
MSED399549
MPUL272635 MYPU_0680
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_1623
MMAR426368 MMARC7_0290
MMAR402880 MMARC5_0557
MMAR368407 MEMAR_0502
MMAR267377 MMP1036
MLAB410358 MLAB_1703
MKAN190192 MK0847
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665 MAEO_0253
MACE188937
LSAK314315 LSA0063
LREU557436 LREU_0069
LMES203120 LEUM_1460
LLAC272623 L12179
LLAC272622 LACR_2207
LJOH257314
LINT267671 LIC_12245
LINT189518 LA1517
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBOR355277 LBJ_1702
LBOR355276 LBL_1921
LBIF456481 LEPBI_I0479
LBIF355278 LBF_0461
LACI272621
IHOS453591
HSP64091 VNG0321G
HSAL478009 OE1490R
HPYL85963
HPYL357544
HPY
HMUK485914 HMUK_2990
HMAR272569 RRNAC1803
HHEP235279
HBUT415426 HBUT_1010
HAUR316274 HAUR_2926
HACI382638
GFOR411154 GFO_3123
FSUC59374 FSU2115
FNUC190304 FN1549
FMAG334413
FJOH376686 FJOH_1171
EFAE226185 EF_0014
DSP255470 CBDBA691
DSP216389 DEHABAV1_0667
DRAD243230 DR_2143
DGEO319795
DETH243164 DET_0737
CTRA471473 CTLON_0631
CTRA471472 CTL0634
CTEP194439 CT_1384
CSUL444179
CPRO264201 PC1766
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161 TC_0658
CMIC443906 CMM_2019
CMIC31964 CMS1214
CMET456442
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHUT269798 CHU_3840
CHOM360107
CFET360106
CFEL264202
CCUR360105
CCON360104
CCAV227941 CCA_00265
CABO218497
BXEN266265
BTHE226186
BLON206672 BL0549
BFRA295405
BFRA272559
BAPH372461
AYEL322098
AURANTIMONAS
APER272557 APE2153
ALAI441768 ACL_0837
AFUL224325 AF_1420
ABUT367737


Organism features enriched in list (features available for 152 out of the 161 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000465216112
Arrangment:Singles 0.000335692286
Arrangment:Tetrads 0.004486444
Disease:Leptospirosis 0.004486444
Disease:Pharyngitis 0.000018688
Disease:bronchitis_and_pneumonitis 0.000018688
Endospores:No 9.142e-882211
GC_Content_Range4:0-40 2.583e-679213
GC_Content_Range4:60-100 3.286e-618145
GC_Content_Range7:30-40 0.000110761166
GC_Content_Range7:40-50 0.008109040117
GC_Content_Range7:50-60 0.000196614107
GC_Content_Range7:60-70 4.489e-616134
Genome_Size_Range5:0-2 4.645e-2085155
Genome_Size_Range5:4-6 2.428e-1512184
Genome_Size_Range5:6-10 0.0045553547
Genome_Size_Range9:0-1 5.693e-61827
Genome_Size_Range9:1-2 1.991e-1367128
Genome_Size_Range9:4-5 4.019e-7796
Genome_Size_Range9:5-6 1.232e-7588
Gram_Stain:Gram_Neg 0.001449972333
Gram_Stain:Gram_Pos 0.001378526150
Habitat:Multiple 0.005146435178
Habitat:Specialized 0.00076382453
Habitat:Terrestrial 0.0042321231
Motility:Yes 0.004343357267
Optimal_temp.:37 0.004340938106
Oxygen_Req:Aerobic 0.002066235185
Oxygen_Req:Anaerobic 0.000042443102
Oxygen_Req:Facultative 0.001228638201
Oxygen_Req:Microaerophilic 0.00124541118
Pathogenic_in:Human 0.000365639213
Shape:Irregular_coccus 1.249e-61417
Shape:Oval 0.001146855
Shape:Rod 1.650e-1549347
Shape:Sphere 1.052e-71619
Shape:Spiral 9.686e-72234
Temp._range:Hyperthermophilic 0.00420281223
Temp._range:Thermophilic 0.00497681635



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462130.6762
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951790.6357
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002290.6081
PWY-5918 (heme biosynthesis I)2722120.5839
TYRFUMCAT-PWY (tyrosine degradation I)1841650.5822
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251870.5769
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491430.5752
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862160.5663
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912180.5641
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962190.5555
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181800.5549
PWY-4041 (γ-glutamyl cycle)2792100.5490
PWY-1269 (CMP-KDO biosynthesis I)3252310.5486
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902150.5477
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392350.5354
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002170.5306
PWY-5028 (histidine degradation II)1301250.5286
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162640.5277
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831560.5225
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482350.5107
PWY-5148 (acyl-CoA hydrolysis)2271780.5094
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292260.5051
PWY-5913 (TCA cycle variation IV)3012130.5019
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911570.4980
AST-PWY (arginine degradation II (AST pathway))1201140.4915
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222600.4855
PWY-5386 (methylglyoxal degradation I)3052110.4772
PWY0-862 (cis-dodecenoyl biosynthesis)3432260.4660
DAPLYSINESYN-PWY (lysine biosynthesis I)3422250.4623
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551850.4620
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911510.4560
P344-PWY (acrylonitrile degradation)2101610.4547
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96940.4545
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742360.4474
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262150.4424
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351170.4412
VALDEG-PWY (valine degradation I)2901980.4377
GLUTAMINDEG-PWY (glutamine degradation I)1911480.4350
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381180.4350
REDCITCYC (TCA cycle variation II)1741380.4301
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081560.4278
PWY-46 (putrescine biosynthesis III)1381170.4272
GALACTCAT-PWY (D-galactonate degradation)104960.4262
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982420.4241
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112050.4209
PWY-561 (superpathway of glyoxylate cycle)1621300.4207
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652280.4190
PWY-5340 (sulfate activation for sulfonation)3852360.4182
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121000.4173
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561260.4163
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491750.4156
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491750.4156
GALACTARDEG-PWY (D-galactarate degradation I)1511230.4152
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891940.4148
GLYOXYLATE-BYPASS (glyoxylate cycle)1691330.4140
PWY-5194 (siroheme biosynthesis)3122040.4116
GLUCARDEG-PWY (D-glucarate degradation I)1521230.4109
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761360.4078
PWY0-501 (lipoate biosynthesis and incorporation I)3852340.4049
ARO-PWY (chorismate biosynthesis I)5102770.4002



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10438   EG10437   EG10436   EG10435   
EG107900.9993280.9993830.9996410.999691
EG104380.9999610.9997030.999675
EG104370.9997730.999716
EG104360.999994
EG10435



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PAIRWISE BLAST SCORES:

  EG10790   EG10438   EG10437   EG10436   EG10435   
EG107900.0f0----
EG10438-0.0f0---
EG10437--0.0f0--
EG10436---0.0f0-
EG10435----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2982 (HflB, integral membrane ATP-dependent zinc metallopeptidase) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.400, average score: 0.943)
  Genes in pathway or complex:
             0.8664 0.7440 EG11506 (ftsH) EG11506-MONOMER (ATP-dependent zinc metalloprotease FtsH)
   *in cand* 0.9998 0.9996 EG10436 (hflK) EG10436-MONOMER (regulator of FtsH protease)
   *in cand* 0.9998 0.9997 EG10435 (hflC) EG10435-MONOMER (regulator of FtsH protease)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10437 (hflX) EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
   *in cand* 0.9997 0.9993 EG10438 (hfq) EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
   *in cand* 0.9996 0.9993 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)

- CPLX0-1321 (HflK-HflC complex; regulator of FtsH protease) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.400, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9997 EG10435 (hflC) EG10435-MONOMER (regulator of FtsH protease)
   *in cand* 0.9998 0.9996 EG10436 (hflK) EG10436-MONOMER (regulator of FtsH protease)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10437 (hflX) EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
   *in cand* 0.9997 0.9993 EG10438 (hfq) EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
   *in cand* 0.9996 0.9993 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10435 EG10436 EG10437 EG10438 EG10790 (centered at EG10436)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10790   EG10438   EG10437   EG10436   EG10435   
410/623332/623394/623345/623353/623
AAEO224324:0:Tyes8310---
AAUR290340:2:Tyes--0573-
AAVE397945:0:Tyes-0123
ABAC204669:0:Tyes-10--
ABAU360910:0:Tyes05432
ABOR393595:0:Tyes06543
ACAU438753:0:Tyes213651751601
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LLAC272622:5:Tyes0----
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MLEP272631:0:Tyes0-427--
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MMAG342108:0:Tyes8180111171118
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MMAR394221:0:Tyes-01576575
MMAR402880:1:Tyes----0
MMAR426368:0:Tyes----0
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MSME246196:0:Tyes0-1966--
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PING357804:0:Tyes04321
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PNAP365044:8:Tyes60123
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PTHE370438:0:Tyes-0784--
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RFEL315456:2:Tyes---10
RFER338969:1:Tyes-3210
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RSPH272943:4:Tyes58910579578
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RSPH349102:5:Tyes06096101011
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SAUR158878:1:Tno01310---
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SCO:2:Fyes1850-404605466
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SELO269084:0:Tyes39-0--
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SEPI176279:1:Tyes16260---
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SGOR29390:0:Tyes962-0--
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TWHI203267:0:Tyes0----
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VCHO:0:Tyes22930123
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VEIS391735:1:Tyes-3210
VFIS312309:2:Tyes05432
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WPIP80849:0:Tyes---02
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YPES187410:5:Tno50134
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YPES377628:2:Tno05432
YPES386656:2:Tno05432
YPSE273123:2:Tno50123
YPSE349747:2:Tno05432
ZMOB264203:0:Tyes137901--



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