CANDIDATE ID: 235

CANDIDATE ID: 235

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9967650e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    4.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10304 (fhuC) (b0151)
   Products of gene:
     - FHUC-MONOMER (FhuC)
     - ABC-11-CPLX (iron (III) hydroxamate ABC transporter)
       Reactions:
        ATP + iron (III) hydroxamate complex[periplasmic space] + H2O  ->  ADP + phosphate + iron (III) hydroxamate complex[cytosol]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]

- EG10298 (fepG) (b0589)
   Products of gene:
     - FEPG-MONOMER (FepG)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10296 (fepD) (b0590)
   Products of gene:
     - FEPD-MONOMER (FepD)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10295 (fepC) (b0588)
   Products of gene:
     - FEPC-MONOMER (FepC)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10290 (fecE) (b4287)
   Products of gene:
     - FECE-MONOMER (FecE)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 184
Effective number of orgs (counting one per cluster within 468 clusters): 117

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TWHI218496 ncbi Tropheryma whipplei TW08/274
TWHI203267 ncbi Tropheryma whipplei Twist4
TFUS269800 ncbi Thermobifida fusca YX5
TDEN243275 ncbi Treponema denticola ATCC 354054
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STRO369723 ncbi Salinispora tropica CNB-4405
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP644076 Silicibacter sp. TrichCH4B5
SSP1148 ncbi Synechocystis sp. PCC 68035
SSON300269 ncbi Shigella sonnei Ss0465
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153055
SPRO399741 ncbi Serratia proteamaculans 5685
SPNE488221 ncbi Streptococcus pneumoniae 705854
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-64
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-144
SPNE171101 ncbi Streptococcus pneumoniae R64
SPNE170187 ncbi Streptococcus pneumoniae G544
SPNE1313 Streptococcus pneumoniae4
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SDYS300267 ncbi Shigella dysenteriae Sd1975
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2275
SAVE227882 ncbi Streptomyces avermitilis MA-46805
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SARE391037 ncbi Salinispora arenicola CNS-2055
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSP101510 ncbi Rhodococcus jostii RHA15
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332095
RETL347834 ncbi Rhizobium etli CFN 424
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PPUT76869 ncbi Pseudomonas putida GB-15
PPRO298386 ncbi Photobacterium profundum SS94
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NSP103690 ncbi Nostoc sp. PCC 71205
NFAR247156 ncbi Nocardia farcinica IFM 101525
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MAQU351348 ncbi Marinobacter aquaeolei VT85
LXYL281090 ncbi Leifsonia xyli xyli CTCB075
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LPLA220668 ncbi Lactobacillus plantarum WCFS15
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LINN272626 ncbi Listeria innocua Clip112625
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
HSP64091 ncbi Halobacterium sp. NRC-14
HSAL478009 ncbi Halobacterium salinarum R14
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FSP1855 Frankia sp. EAN1pec5
FALN326424 ncbi Frankia alni ACN14a5
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DRAD243230 ncbi Deinococcus radiodurans R15
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DGEO319795 ncbi Deinococcus geothermalis DSM 113004
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CTET212717 ncbi Clostridium tetani E884
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT4
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3825
CMIC31964 ncbi Clavibacter michiganensis sepedonicus5
CJEI306537 ncbi Corynebacterium jeikeium K4115
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130325
CEFF196164 ncbi Corynebacterium efficiens YS-3145
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131295
CDIF272563 ncbi Clostridium difficile 6305
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BXEN266265 ncbi Burkholderia xenovorans LB4004
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BSUB ncbi Bacillus subtilis subtilis 1685
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP1667 Arthrobacter sp.5
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
ANAE240017 Actinomyces oris MG15
AMAR329726 ncbi Acaryochloris marina MBIC110175
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
AAUR290340 ncbi Arthrobacter aurescens TC15


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10298   EG10296   EG10295   EG10290   
YPSE349747 YPSIP31758_3333YPSIP31758_2442YPSIP31758_2444YPSIP31758_2444
YPSE273123 YPTB0739YPTB1547YPTB1545YPTB1545
YPES377628 YPN_0698YPN_2445YPN_2447YPN_2447
YPES360102 YPA_2892YPA_0829YPA_0827YPA_0827
YPES349746 YPANGOLA_A0998YPANGOLA_A3184YPANGOLA_A3186YPANGOLA_A3186
YPES214092 YPO3392YPO1535YPO1533YPO1533
YPES187410 Y0796Y2635Y2637Y2637
YENT393305 YE0730YE3620YE3619YE3621YE3621
VPAR223926 VPA1436VPA1653VPA1652VPA1652
VCHO345073 VC0395_A2581VC0395_A0307VC0395_A0306VC0395_A0308VC0395_A0308
VCHO VC0201VC0778VC0777VC0779VC0779
TWHI218496 TW0064TW0065TW0063TW0063
TWHI203267 TW059TW060TW058TW058
TFUS269800 TFU_0336TFU_0337TFU_0338TFU_0336TFU_0336
TDEN243275 TDE_0625TDE_2357TDE_2357TDE_0625
STYP99287 STM0192STM0591STM0592STM0590STM0590
STRO369723 STROP_2555STROP_2554STROP_2553STROP_2555STROP_1628
STHE292459 STH1283STH1284STH1285STH1283STH1283
SSP644076 SCH4B_3664SCH4B_3539SCH4B_3538SCH4B_3664SCH4B_3664
SSP1148 SLR1318SLR1317SLR1316SLR1318SLR1318
SSON300269 SSO_0163SSO_0540SSO_0541SSO_0539SSO_4459
SSAP342451 SSP2073SSP2071SSP2072SSP2073SSP2073
SPRO399741 SPRO_3978SPRO_3425SPRO_3424SPRO_3426SPRO_3426
SPNE488221 SP70585_1115SP70585_1113SP70585_1115SP70585_1115
SPNE487214 SPH_1137SPH_1135SPH_1137SPH_1137
SPNE487213 SPT_1085SPT_1083SPT_1085SPT_1085
SPNE171101 SPR0938SPR0935SPR0938SPR0938
SPNE170187 SPN07054SPN07057SPN07054SPN07054
SPNE1313 SPJ_0972SPJ_0970SPJ_0972SPJ_0972
SMEL266834 SMA1741SMA1742SMA1745SMA1741SMA1741
SMED366394 SMED_2494SMED_2493SMED_2492SMED_2494SMED_2494
SLAC55218 SL1157_0504SL1157_0503SL1157_0502SL1157_0504SL1157_0504
SHIGELLA FHUCFEPGFEPDFEPCFEPC
SHAE279808 SH2247SH2246SH2247SH2247
SGLO343509 SGP1_0035SGP1_0036SGP1_0037SGP1_0035SGP1_0035
SFLE373384 SFV_0136SFV_0537SFV_0538SFV_0536SFV_0536
SFLE198214 AAN41806.1AAN42152.1AAN42153.1AAN42151.1AAN42151.1
SERY405948 SACE_0413SACE_0412SACE_0411SACE_0413SACE_0413
SENT454169 SEHA_C0225SEHA_C0703SEHA_C0704SEHA_C0702SEHA_C0702
SENT321314 SCH_0192SCH_0622SCH_0623SCH_0621SCH_0621
SENT295319 SPA0198SPA2143SPA2142SPA2144SPA2144
SENT220341 STY0219STY0635STY0636STY0634STY0634
SENT209261 T0200T2277T2276T2278T2278
SDYS300267 SDY_0167SDY_0520SDY_0521SDY_0519SDY_4293
SCO SCO1785SCO1786SCO1787SCO1785SCO0495
SBOY300268 SBO_0140SBO_0450SBO_0451SBO_0449SBO_0449
SAVE227882 SAV6493SAV6492SAV6491SAV6493SAV6493
SAUR93062 SACOL0704SACOL0098SACOL0704SACOL0704
SAUR93061 SAOUHSC_00652SAOUHSC_00072SAOUHSC_00652SAOUHSC_00652
SAUR426430 NWMN_0616NWMN_0058NWMN_0616NWMN_0616
SAUR418127 SAHV_0644SAHV_0113SAHV_0644SAHV_0644
SAUR367830 SAUSA300_0633SAUSA300_0116SAUSA300_0633SAUSA300_0633
SAUR359787 SAURJH1_0685SAURJH1_0105SAURJH1_0685SAURJH1_0685
SAUR359786 SAURJH9_0670SAURJH9_0101SAURJH9_0670SAURJH9_0670
SAUR282459 SAS0612SAS0088SAS0612SAS0612
SAUR282458 SAR0657SAR0117SAR0657SAR0657
SAUR273036 SAB0596SAB2056CSAB0053CSAB0596SAB0596
SAUR196620 MW0609MW0087MW0609MW0609
SAUR158879 SA0602SA0110SA0602SA0602
SAUR158878 SAV0647SAV0114SAV0647SAV0647
SARE391037 SARE_2744SARE_2743SARE_2742SARE_2744SARE_2744
RXYL266117 RXYL_0416RXYL_0415RXYL_0414RXYL_0416RXYL_0416
RSPH349102 RSPH17025_3334RSPH17025_3333RSPH17025_3332RSPH17025_3334RSPH17025_3334
RSPH349101 RSPH17029_0086RSPH17029_3059RSPH17029_3060RSPH17029_3058RSPH17029_3058
RSPH272943 RSP_1437RSP_3414RSP_3415RSP_3413RSP_3413
RSP101510 RHA1_RO07251RHA1_RO07252RHA1_RO07253RHA1_RO07251RHA1_RO07251
RSAL288705 RSAL33209_2862RSAL33209_3347RSAL33209_1683RSAL33209_2862RSAL33209_1681
RETL347834 RHE_PE00282RHE_CH03270RHE_CH03270RHE_PE00282
PSYR205918 PSYR_2593PSYR_2592PSYR_2591PSYR_2593PSYR_0664
PPUT76869 PPUTGB1_1803PPUTGB1_1806PPUTGB1_1805PPUTGB1_1803PPUTGB1_1803
PPRO298386 PBPRA1565PBPRB1816PBPRB1814PBPRB1814
PMUL272843 PM0128PM0129PM0128PM0128
PMEN399739 PMEN_2860PMEN_4564PMEN_4564PMEN_2860
PLUM243265 PLU4450PLU4449PLU4624PLU4626PLU4450
PFLU220664 PFL_3622PFL_3625PFL_3624PFL_3622PFL_3622
PCRY335284 PCRYO_1285PCRYO_1284PCRYO_1285PCRYO_1285
PAER208964 PA4158PA4161PA4160PA4158PA4158
PAER208963 PA14_55040PA14_10140PA14_10160PA14_10180PA14_10180
OIHE221109 OB0262OB0261OB0260OB0262OB0450
OANT439375 OANT_3476OANT_4082OANT_2826OANT_4085OANT_4085
NSP103690 ALL0389ALL2585ALL2586ALL2584ALL2584
NFAR247156 NFA25190NFA25200NFA25210NFA25190NFA25190
MSP400668 MMWYL1_1010MMWYL1_0465MMWYL1_3637MMWYL1_3639MMWYL1_0690
MSP266779 MESO_1443MESO_0134MESO_0136MESO_0136
MSME246196 MSMEG_0015MSMEG_0013MSMEG_0012MSMEG_0015MSMEG_0015
MAQU351348 MAQU_2188MAQU_3298MAQU_3297MAQU_3299MAQU_3299
LXYL281090 LXX17230LXX17240LXX17240LXX17230LXX17230
LWEL386043 LWE1986LWE2377LWE1984LWE1986LWE1986
LSPH444177 BSPH_2323BSPH_1674BSPH_0991BSPH_1675BSPH_1675
LPLA220668 LP_3104LP_3106LP_3105LP_3104LP_3104
LMON265669 LMOF2365_1990LMOF2365_2401LMOF2365_1988LMOF2365_1990LMOF2365_1990
LMON169963 LMO1960LMO2430LMO1958LMO1960LMO1960
LINN272626 LIN2074LIN2524LIN2072LIN2074LIN2074
KRAD266940 KRAD_1239KRAD_1240KRAD_1241KRAD_1239KRAD_1239
KPNE272620 GKPORF_B4454GKPORF_B5026GKPORF_B5027GKPORF_B5025GKPORF_B5025
HSP64091 VNG2558GVNG2560GVNG2558GVNG2558G
HSAL478009 OE4587ROE4591ROE4587ROE4587R
HCHE349521 HCH_01396HCH_03793HCH_03792HCH_03795HCH_03795
HAUR316274 HAUR_1737HAUR_1736HAUR_1735HAUR_1737HAUR_1737
GTHE420246 GTNG_0175GTNG_1319GTNG_1318GTNG_1320GTNG_0175
GKAU235909 GK0194GK1460GK1459GK1461GK1461
FSP1855 FRANEAN1_3047FRANEAN1_3046FRANEAN1_5947FRANEAN1_3047FRANEAN1_3047
FALN326424 FRAAL5294FRAAL4162FRAAL4163FRAAL5294FRAAL5294
ESP42895 ENT638_0691ENT638_1121ENT638_1122ENT638_1120ENT638_1120
EFER585054 EFER_0174EFER_2505EFER_2504EFER_2506EFER_2506
EFAE226185 EF_3083EF_0193EF_0192EF_0191
ECOO157 FHUCFEPGFEPDFEPCFEPC
ECOL83334 ECS0155ECS0628ECS0629ECS0627ECS0627
ECOL585397 ECED1_0157ECED1_0586ECED1_0587ECED1_0585ECED1_5151
ECOL585057 ECIAI39_0155ECIAI39_0566ECIAI39_0567ECIAI39_0565ECIAI39_4765
ECOL585056 ECUMN_0148ECUMN_0683ECUMN_0684ECUMN_0682ECUMN_4855
ECOL585055 EC55989_0145EC55989_0581EC55989_0582EC55989_0580EC55989_4959
ECOL585035 ECS88_0162ECS88_0628ECS88_0629ECS88_0627ECS88_4860
ECOL585034 ECIAI1_0149ECIAI1_0573ECIAI1_0574ECIAI1_0572ECIAI1_0572
ECOL481805 ECOLC_3508ECOLC_3055ECOLC_3054ECOLC_3056ECOLC_0739
ECOL469008 ECBD_3467ECBD_3066ECBD_3065ECBD_3067ECBD_3751
ECOL439855 ECSMS35_0163ECSMS35_0609ECSMS35_0610ECSMS35_0607ECSMS35_0607
ECOL413997 ECB_00150ECB_00556ECB_00557ECB_00555ECB_04153
ECOL409438 ECSE_0152ECSE_0656ECSE_0657ECSE_0655ECSE_0655
ECOL405955 APECO1_1834APECO1_1460APECO1_1459APECO1_1461APECO1_1461
ECOL364106 UTI89_C0167UTI89_C0591UTI89_C0592UTI89_C0590UTI89_C0590
ECOL362663 ECP_0161ECP_0621ECP_0622ECP_0620ECP_0620
ECOL331111 ECE24377A_0156ECE24377A_0609ECE24377A_0610ECE24377A_0607ECE24377A_4864
ECOL316407 ECK0150:JW0147:B0151ECK0582:JW0581:B058ECK0583:JW0582:B0590ECK0581:JW0580:B0588ECK4277:JW4247:B4287
ECOL199310 C0186C0676C0677C0675C0675
ECAR218491 ECA3312ECA2807ECA2808ECA2806ECA1073
DRAD243230 DR_B0121DR_B0015DR_B0123DR_B0121DR_B0121
DHAF138119 DSY1005DSY1004DSY1003DSY1005DSY3570
DGEO319795 DGEO_2759DGEO_2756DGEO_2759DGEO_2759
CVIO243365 CV_2234CV_2235CV_2236CV_2234CV_2234
CTET212717 CTC_01196CTC_01196CTC_01197CTC_01197
CSP501479 CSE45_0698CSE45_2871CSE45_0696CSE45_0698CSE45_0698
CSAL290398 CSAL_1051CSAL_1041CSAL_1042CSAL_2702CSAL_2702
CPER289380 CPR_0797CPR_0796CPR_0795CPR_0797CPR_0797
CPER195103 CPF_0810CPF_0809CPF_0808CPF_0810CPF_0810
CPER195102 CPE0813CPE0812CPE0811CPE0813CPE0813
CNOV386415 NT01CX_1447NT01CX_1447NT01CX_1448NT01CX_1448
CMIC443906 CMM_2928CMM_2929CMM_2930CMM_2928CMM_2928
CMIC31964 CMS3063CMS3064CMS3065CMS3063CMS3063
CJEI306537 JK1293JK1773JK1772JK1818JK1806
CGLU196627 CG0768CG0590CG0591CG0589CG0589
CEFF196164 CE0684CE0685CE0686CE0684CE0684
CDIP257309 DIP0585DIP1060DIP1061DIP1059DIP1059
CDIF272563 CD2875CD2876CD2877CD2875CD2875
CBOT536232 CLM_0381CLM_0805CLM_0804CLM_0381CLM_0381
CBOT515621 CLJ_B0366CLJ_B0760CLJ_B0839CLJ_B0366CLJ_B0366
CBOT508765 CLL_A2113CLL_A2114CLL_A2115CLL_A2113CLL_A2113
CBOT498213 CLD_0440CLD_0078CLD_0079CLD_0440CLD_0440
CBOT441772 CLI_0383CLI_0757CLI_0756CLI_0383CLI_0383
CBOT441771 CLC_0371CLC_0742CLC_0741CLC_0371CLC_0371
CBOT441770 CLB_0356CLB_0727CLB_0726CLB_0356CLB_0356
CBOT36826 CBO0313CBO0688CBO0687CBO0313CBO0313
CBEI290402 CBEI_3760CBEI_3761CBEI_3762CBEI_3760CBEI_2141
CACE272562 CAC0791CAC0789CAC0791CAC0791
BXEN266265 BXE_B1929BXE_B0521BXE_B0520BXE_B0520
BWEI315730 BCERKBAB4_5174BCERKBAB4_0531BCERKBAB4_0530BCERKBAB4_0532BCERKBAB4_5174
BTHU412694 BALH_4877BALH_0555BALH_0554BALH_0556BALH_4877
BTHU281309 BT9727_5061BT9727_0527BT9727_0526BT9727_0528BT9727_5061
BSUB BSU33290BSU01610BSU08450BSU32940BSU33290
BPUM315750 BPUM_2990BPUM_2909BPUM_2992BPUM_2949BPUM_2990
BMAL243160 BMA_1188BMA_1187BMA_1188BMA_1188
BLIC279010 BL00705BL01088BL02185BL02183BL00705
BHAL272558 BH1081BH3789BH3790BH1039BH1081
BCLA66692 ABC1084ABC1083ABC1082ABC1084ABC1084
BCER572264 BCA_5531BCA_0651BCA_0650BCA_0652BCA_5531
BCER405917 BCE_5510BCE_0685BCE_0684BCE_0686BCE_5510
BCER315749 BCER98_3902BCER98_3903BCER98_3904BCER98_3902BCER98_3902
BCER288681 BCE33L5078BCE33L0527BCE33L0526BCE33L0528BCE33L5078
BCER226900 BC_5381BC_0618BC_3468BC_0619BC_5381
BANT592021 BAA_5655BAA_0699BAA_0698BAA_0700BAA_5655
BANT568206 BAMEG_5673BAMEG_3970BAMEG_3971BAMEG_3969BAMEG_5673
BANT261594 GBAA5629GBAA0617GBAA0616GBAA0618GBAA5629
BANT260799 BAS5230BAS0583BAS0582BAS0584BAS5230
BAMY326423 RBAM_030410RBAM_030420RBAM_030430RBAM_030060RBAM_030410
BAMB398577 BAMMC406_1553BAMMC406_1554BAMMC406_1553BAMMC406_1553
BAMB339670 BAMB_1532BAMB_1695BAMB_1532BAMB_1532
AVAR240292 AVA_2830AVA_2828AVA_2830AVA_2830
ASP1667 ARTH_3932ARTH_3933ARTH_3934ARTH_3932ARTH_3932
ASAL382245 ASA_4365ASA_1849ASA_1847ASA_1847
AORE350688 CLOS_2428CLOS_2429CLOS_2430CLOS_2428CLOS_2810
ANAE240017 ANA_2757ANA_1458ANA_2754ANA_2757ANA_1461
AMAR329726 AM1_3348AM1_3414AM1_A0163AM1_A0161AM1_A0161
ACAU438753 AZC_3237AZC_0185AZC_0184AZC_0183AZC_0183
AAUR290340 AAUR_0389AAUR_0558AAUR_0559AAUR_0557AAUR_3763


Organism features enriched in list (features available for 172 out of the 184 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00150123992
Arrangment:Clusters 5.083e-71517
Arrangment:Filaments 0.0077543710
Arrangment:Pairs 2.467e-1366112
Disease:Anthrax 0.007390344
Disease:Botulism 0.002144355
Disease:Bubonic_plague 0.009148756
Disease:Dysentery 0.000619666
Disease:Opportunistic_infections 0.002144355
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0004104911
Disease:Urinary_tract_infection 0.007390344
Endospores:Yes 3.100e-164353
GC_Content_Range7:50-60 0.001536744107
GC_Content_Range7:70-100 0.0004104911
Genome_Size_Range5:0-2 8.648e-243155
Genome_Size_Range5:4-6 2.171e-1087184
Genome_Size_Range5:6-10 0.00065512447
Genome_Size_Range9:0-1 0.0042546227
Genome_Size_Range9:1-2 2.293e-211128
Genome_Size_Range9:4-5 5.405e-64796
Genome_Size_Range9:5-6 0.00024804088
Genome_Size_Range9:6-8 0.00755331838
Gram_Stain:Gram_Neg 8.812e-675333
Gram_Stain:Gram_Pos 1.850e-1685150
Habitat:Aquatic 0.00014941391
Habitat:Host-associated 0.002377247206
Habitat:Multiple 6.996e-1084178
Habitat:Specialized 0.0022993753
Habitat:Terrestrial 0.00442631631
Motility:Yes 0.000160198267
Optimal_temp.:25-35 0.0054494914
Optimal_temp.:30-37 1.586e-71618
Oxygen_Req:Anaerobic 0.001201318102
Oxygen_Req:Facultative 1.354e-1093201
Pathogenic_in:Human 2.823e-892213
Pathogenic_in:No 0.000300049226
Shape:Branched_filament 0.007390344
Shape:Rod 3.567e-8131347
Shape:Spiral 0.0000698134
Temp._range:Mesophilic 3.662e-6158473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 384
Effective number of orgs (counting one per cluster within 468 clusters): 320

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP292414 ncbi Ruegeria sp. TM10401
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H160
REUT264198 ncbi Ralstonia eutropha JMP1340
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL11
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse1
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-11
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233651
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5831
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-11
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10298   EG10296   EG10295   EG10290   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245 XAUT_2780
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160 RRC301
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TSP28240 TRQ2_0758
TROS309801
TPET390874 TPET_0734
TPEN368408
TPAL243276
TMAR243274 TM_0190
TKOD69014 TK2019
TERY203124
TELO197221
TDEN326298
TDEN292415
TCRU317025 TCR_0179
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391295 SSU05_0647
SSP94122 SHEWANA3_3280
SSP84588
SSP64471
SSP387093
SSP292414 TM1040_0344
SSP1131
SSOL273057
SSED425104
SPEA398579
SONE211586
SMUT210007
SMAR399550
SLOI323850 SHEW_0712
SHAL458817
SGOR29390
SFUM335543
SELO269084
SDEN318161 SDEN_1117
SDEG203122
SBAL402882
SBAL399599
SALA317655
SACI56780
SACI330779
RTYP257363
RSP357808 ROSERS_3566
RSOL267608
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056 RPC_4254
RPAL316055
RPAL258594
RMET266264 RMET_5377
RMAS416276
RFER338969
RFEL315456
REUT381666
REUT264198
RDEN375451 RD1_4190
RCON272944
RCAS383372 RCAS_4371
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811 PSYCPRWF_1102
PSP312153
PSP117
PRUM264731
PPUT351746
PPUT160488
PPEN278197
PNAP365044
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PING357804 PING_3342
PHOR70601 PH1236
PHAL326442
PGIN242619
PFUR186497
PFLU205922
PENT384676
PDIS435591
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSP35761
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307 MTHE_0443
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988 MS1201
MSTA339860
MSP409
MSP189918
MSP164757
MSP164756
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358 MLAB_1378
MKAN190192
MJAN243232 MJ_0087
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_3883
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937 MA2149
MABS561007
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
ILOI283942 IL0114
IHOS453591
HWAL362976
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761
HINF71421
HINF374930 CGSHIEE_08770
HINF281310
HHEP235279
HHAL349124 HHAL_1353
HDUC233412
HBUT415426
HARS204773
HACI382638
GVIO251221 GLL0579
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470 CBDBA635
DSP216389 DEHABAV1_0621
DSHI398580 DSHI_0572
DRED349161
DPSY177439
DOLE96561
DNOD246195
DETH243164 DET_0685
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109 JJD26997_0753
CJEJ354242
CJEJ195099
CJEJ192222
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTRI382640 BT_0771
BTHE226186
BSUI470137 BSUIS_A1396
BSUI204722 BR_1345
BSP376
BSP107806
BQUI283165 BQ04130
BPET94624 BPETPSEUDO_17
BPER257313
BPAR257311
BOVI236 GBOORF1356
BMEL359391 BAB1_1365
BMEL224914 BMEI0659
BLON206672
BJAP224911
BHER314723
BHEN283166 BH04940
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BCAN483179 BCAN_A1372
BBUR224326
BBRO257310
BBAC360095 BARBAKC583_0456
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP76114 EBA4019
ASP62977
ASP62928
ASP232721
APLE434271 APJL_2063
APLE416269 APL_2013
APHA212042
APER272557
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272 MLG_2821
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABOR393595
ABAC204669
AAVE397945
AAEO224324


Organism features enriched in list (features available for 359 out of the 384 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 3.819e-73592
Arrangment:Pairs 4.502e-1040112
Disease:Gastroenteritis 0.0043333313
Disease:Pneumonia 0.0088526312
Endospores:Yes 3.326e-12953
GC_Content_Range7:70-100 0.0035460211
Genome_Size_Range5:0-2 4.262e-20140155
Genome_Size_Range5:4-6 3.236e-786184
Genome_Size_Range5:6-10 1.515e-71247
Genome_Size_Range9:0-1 0.00021992527
Genome_Size_Range9:1-2 1.468e-15115128
Genome_Size_Range9:4-5 0.00011604396
Genome_Size_Range9:5-6 0.00293514388
Genome_Size_Range9:6-8 4.494e-61038
Gram_Stain:Gram_Neg 1.535e-6232333
Gram_Stain:Gram_Pos 7.497e-2144150
Habitat:Aquatic 0.00005827291
Habitat:Multiple 6.190e-686178
Habitat:Terrestrial 0.00161761131
Motility:No 0.005272381151
Motility:Yes 0.0021427149267
Oxygen_Req:Anaerobic 0.000093279102
Oxygen_Req:Facultative 4.176e-1580201
Oxygen_Req:Microaerophilic 0.00892381618
Pathogenic_in:Human 3.563e-1194213
Pathogenic_in:No 0.0000861160226
Shape:Coccobacillus 0.00454691111
Shape:Coccus 0.00100923882
Shape:Irregular_coccus 0.00022671717
Shape:Rod 5.652e-7186347
Shape:Sphere 0.00605481719
Shape:Spiral 8.597e-73334
Temp._range:Hyperthermophilic 0.00120282123
Temp._range:Mesophilic 2.906e-6271473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 2
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TWHI218496 ncbi Tropheryma whipplei TW08/27 0.00569081994
TWHI203267 ncbi Tropheryma whipplei Twist 0.00616262034


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10298   EG10296   EG10295   EG10290   
TWHI218496 TW0064TW0065TW0063TW0063
TWHI203267 TW059TW060TW058TW058


Organism features enriched in list (features available for 2 out of the 2 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Whipple's_disease 5.894e-622
Genome_Size_Range9:0-1 0.0020689227



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241400.5414
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121940.5182
MANNIDEG-PWY (mannitol degradation I)99770.4597
IDNCAT-PWY (L-idonate degradation)2461350.4488
RHAMCAT-PWY (rhamnose degradation)91710.4396
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3561640.4185
RIBOKIN-PWY (ribose degradation)2791400.4075
PWY-3722 (glycine betaine biosynthesis II (Gram-positive bacteria))141900.4066



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10298   EG10296   EG10295   EG10290   
EG103040.9994290.9994220.9997090.99971
EG102980.9997860.9997860.999685
EG102960.9997480.999645
EG102950.999845
EG10290



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PAIRWISE BLAST SCORES:

  EG10304   EG10298   EG10296   EG10295   EG10290   
EG103040.0f0--1.1e-512.4e-49
EG10298-0.0f0---
EG10296--0.0f0--
EG102952.7e-48--0.0f07.3e-55
EG102905.8e-46--3.2e-540.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-1944 (Ferric Enterobactin Transport System) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.600, average score: 0.650)
  Genes in pathway or complex:
             0.4017 0.3046 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.2069 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5712 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
             0.9642 0.8354 EG10293 (fepA) EG10293-MONOMER (FepA, outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D)
   *in cand* 0.9998 0.9997 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9997 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9997 0.9994 EG10298 (fepG) FEPG-MONOMER (FepG)
             0.9992 0.9988 EG10294 (fepB) FEPB-MONOMER (FepB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9997 0.9994 EG10304 (fhuC) FHUC-MONOMER (FhuC)

- ABC-10-CPLX (ferric enterobactin ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.600, average score: 1.000)
  Genes in pathway or complex:
             0.9992 0.9988 EG10294 (fepB) FEPB-MONOMER (FepB)
   *in cand* 0.9997 0.9994 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9997 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9998 0.9997 EG10295 (fepC) FEPC-MONOMER (FepC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9996 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9997 0.9994 EG10304 (fhuC) FHUC-MONOMER (FhuC)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10295 EG10296 EG10298 (centered at EG10298)
EG10304 (centered at EG10304)
EG10290 (centered at EG10290)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10304   EG10298   EG10296   EG10295   EG10290   
227/623187/623213/623223/623227/623
AAUR290340:2:Tyes01651661643299
ABAU360910:0:Tyes0---0
ACAU438753:0:Tyes30912100
AEHR187272:0:Tyes--0--
AHYD196024:0:Tyes2199-2-0
AMAR329726:8:Tyes--200
AMAR329726:9:Tyes066---
AMET293826:0:Tyes0--00
ANAE240017:0:Tyes11900118811903
AORE350688:0:Tyes0120381
APLE416269:0:Tyes0----
APLE434271:0:Tno0----
ASAL382245:5:Tyes2427-200
ASP1667:3:Tyes01200
ASP76114:2:Tyes--0--
AVAR240292:3:Tyes20-22
BABO262698:0:Tno----0
BABO262698:1:Tno--0--
BAMB339670:3:Tno0162-00
BAMB398577:3:Tno01-00
BAMY326423:0:Tyes353637035
BANT260799:0:Tno46601024660
BANT261594:2:Tno46241024624
BANT568206:2:Tyes16351201635
BANT592021:2:Tno48541024854
BBAC360095:0:Tyes--0--
BCAN483179:1:Tno--0--
BCEN331271:2:Tno0--00
BCEN331272:3:Tyes0--00
BCER226900:1:Tyes46610279314661
BCER288681:0:Tno45681024568
BCER315749:1:Tyes01200
BCER405917:1:Tyes45751024575
BCER572264:1:Tno47731024773
BCLA66692:0:Tyes21022
BHAL272558:0:Tyes4227692770042
BHEN283166:0:Tyes--0--
BLIC279010:0:Tyes23260228222802326
BMAL243160:1:Tno10-11
BMAL320388:1:Tno0--00
BMAL320389:1:Tyes0--00
BMEL224914:1:Tno--0--
BMEL359391:1:Tno--0--
BOVI236:1:Tyes--0--
BPSE272560:1:Tyes0--00
BPSE320372:1:Tno0--00
BPSE320373:1:Tno0--00
BPUM315750:0:Tyes800823980
BQUI283165:0:Tyes--0--
BSP36773:2:Tyes0--00
BSUB:0:Tyes3354071833173354
BSUI204722:1:Tyes--0--
BSUI470137:1:Tno--0--
BTHA271848:1:Tno0--00
BTHU281309:1:Tno44981024498
BTHU412694:1:Tno41581024158
BTRI382640:1:Tyes--0--
BVIE269482:7:Tyes0--00
BWEI315730:4:Tyes45771024577
BXEN266265:1:Tyes01385-13861386
CACE272562:1:Tyes2-022
CBEI290402:0:Tyes15711572157315710
CBOT36826:1:Tno037237100
CBOT441770:0:Tyes035935800
CBOT441771:0:Tno036035900
CBOT441772:1:Tno035935800
CBOT498213:1:Tno035435300
CBOT508765:1:Tyes01200
CBOT515621:2:Tyes037945800
CBOT536232:0:Tno040740600
CDES477974:0:Tyes-00--
CDIF272563:1:Tyes01200
CDIP257309:0:Tyes0468469467467
CEFF196164:0:Fyes01200
CGLU196627:0:Tyes1591200
CJEI306537:0:Tyes0491490536524
CJEJ360109:0:Tyes0----
CMIC31964:2:Tyes01200
CMIC443906:2:Tyes01200
CNOV386415:0:Tyes-0011
CPER195102:1:Tyes21022
CPER195103:0:Tno21022
CPER289380:3:Tyes21022
CSAL290398:0:Tyes100116911691
CSP501479:8:Fyes22142022
CTET212717:0:Tyes-0011
CVIO243365:0:Tyes01200
DETH243164:0:Tyes--0--
DGEO319795:0:Tyes0-300
DHAF138119:0:Tyes21022603
DRAD243230:1:Tyes930959393
DSHI398580:5:Tyes--0--
DSP216389:0:Tyes--0--
DSP255470:0:Tno--0--
ECAR218491:0:Tyes22571740174117390
ECOL199310:0:Tno0471472470470
ECOL316407:0:Tno04334344324118
ECOL331111:6:Tno04294304284508
ECOL362663:0:Tno0455456454454
ECOL364106:1:Tno0421422420420
ECOL405955:2:Tyes0383384382382
ECOL409438:6:Tyes0513514512512
ECOL413997:0:Tno04084094074043
ECOL439855:4:Tno0431432430430
ECOL469008:0:Tno405102682
ECOL481805:0:Tno27822328232723290
ECOL585034:0:Tno0416417415415
ECOL585035:0:Tno04544554534528
ECOL585055:0:Tno04314324304737
ECOL585056:2:Tno05325335314692
ECOL585057:0:Tno04054064044616
ECOL585397:0:Tno04034044024838
ECOL83334:0:Tno0483484482482
ECOLI:0:Tno04464474454212
ECOO157:0:Tno0480481479479
EFAE226185:3:Tyes2717210-
EFER585054:1:Tyes02312231123132313
ESP42895:1:Tyes0431432430430
FALN326424:0:Tyes11020111021102
FSP1855:0:Tyes10285011
GKAU235909:1:Tyes01309130813101310
GTHE420246:1:Tyes01130112911310
GVIO251221:0:Tyes-0---
HAUR316274:2:Tyes21022
HCHE349521:0:Tyes02290228922912291
HHAL349124:0:Tyes--0--
HINF374930:0:Tyes0----
HMAR272569:7:Tyes-0-11
HMUK485914:1:Tyes-1-00
HSAL478009:4:Tyes01-00
HSP64091:2:Tno01-00
ILOI283942:0:Tyes--0--
JSP290400:1:Tyes-102-
KPNE272620:2:Tyes0561562560560
KRAD266940:2:Fyes21022
LINN272626:1:Tno2473022
LMON169963:0:Tno2496022
LMON265669:0:Tyes2409022
LPLA220668:0:Tyes02100
LSAK314315:0:Tyes0-1-0
LSPH444177:1:Tyes12816670668668
LWEL386043:0:Tyes2393022
LXYL281090:0:Tyes01100
MACE188937:0:Tyes--0--
MAQU351348:2:Tyes01102110111031103
MGIL350054:3:Tyes--0--
MJAN243232:2:Tyes-0---
MLAB410358:0:Tyes----0
MLOT266835:2:Tyes-00--
MSME246196:0:Tyes21022
MSP266779:3:Tyes-1320022
MSP400668:0:Tyes542032183220224
MSUC221988:0:Tyes0----
MTHE349307:0:Tyes-0---
NFAR247156:2:Tyes01200
NSP103690:6:Tyes02215221622142214
OANT439375:4:Tyes6471250012531253
OIHE221109:0:Tyes2102190
PACN267747:0:Tyes-087--
PAER208963:0:Tyes36470133
PAER208964:0:Tno03200
PCAR338963:0:Tyes-00--
PCRY335284:1:Tyes10-11
PFLU216595:1:Tyes0--00
PFLU220664:0:Tyes03200
PHOR70601:0:Tyes-0---
PING357804:0:Tyes-0---
PLUM243265:0:Fyes101811831
PMEN399739:0:Tyes0172517250-
PMUL272843:1:Tyes01-00
PPRO298386:1:Tyes--200
PPRO298386:2:Tyes0----
PPUT76869:0:Tno03200
PSP296591:2:Tyes-1-00
PSP56811:2:Tyes0----
PSYR205918:0:Tyes19311930192919310
PSYR223283:2:Tyes0--00
RCAS383372:0:Tyes-0---
RDEN375451:4:Tyes-0---
RETL347834:3:Tyes0---0
RETL347834:5:Tyes-00--
RLEG216596:3:Tyes0----
RLEG216596:6:Tyes-00--
RMET266264:1:Tyes-0---
RPAL316056:0:Tyes--0--
RSAL288705:0:Tyes11811666211810
RSP101510:3:Fyes01200
RSP357808:0:Tyes-0---
RSPH272943:3:Tyes-1200
RSPH272943:4:Tyes0----
RSPH349101:1:Tno-1200
RSPH349101:2:Tno0----
RSPH349102:4:Tyes21022
RXYL266117:0:Tyes21022
SAGA205921:0:Tno0--00
SAGA208435:0:Tno0--00
SAGA211110:0:Tyes0--00
SARE391037:0:Tyes21022
SAUR158878:1:Tno550-0550550
SAUR158879:1:Tno525-0525525
SAUR196620:0:Tno542-0542542
SAUR273036:0:Tno53120030531531
SAUR282458:0:Tno538-0538538
SAUR282459:0:Tno549-0549549
SAUR359786:1:Tno585-0585585
SAUR359787:1:Tno575-0575575
SAUR367830:3:Tno503-0503503
SAUR418127:0:Tyes548-0548548
SAUR426430:0:Tno574-0574574
SAUR93061:0:Fno547-0547547
SAUR93062:1:Tno593-0593593
SAVE227882:1:Fyes21022
SBOY300268:1:Tyes0290291289289
SCO:2:Fyes12951296129712950
SDEN318161:0:Tyes-0---
SDYS300267:1:Tyes03333343323867
SENT209261:0:Tno01975197419761976
SENT220341:0:Tno0368369367367
SENT295319:0:Tno01862186118631863
SENT321314:2:Tno0438439437437
SENT454169:2:Tno0462463461461
SEPI176279:1:Tyes0--00
SEPI176280:0:Tno0--00
SERY405948:0:Tyes21022
SFLE198214:0:Tyes0357358356356
SFLE373384:0:Tno0379380378378
SGLO343509:2:Tyes01200
SHAE279808:0:Tyes1-011
SHIGELLA:0:Tno0346347345345
SLAC55218:1:Fyes21022
SLOI323850:0:Tyes0----
SMED366394:3:Tyes21022
SMEL266834:0:Tyes01200
SPNE1313:0:Tyes2-022
SPNE170187:0:Tyes3-033
SPNE171101:0:Tno3-033
SPNE487213:0:Tno2-022
SPNE487214:0:Tno2-022
SPNE488221:0:Tno2-022
SPRO399741:1:Tyes5601022
SPYO160490:0:Tno0--00
SPYO186103:0:Tno0--00
SPYO193567:0:Tno0--00
SPYO198466:0:Tno0--00
SPYO286636:0:Tno0--00
SPYO293653:0:Tno0--00
SPYO319701:0:Tyes0--00
SPYO370551:0:Tno0--00
SPYO370552:0:Tno0--00
SPYO370553:0:Tno0--00
SPYO370554:0:Tyes0--00
SRUB309807:1:Tyes-00--
SSAP342451:2:Tyes20122
SSON300269:1:Tyes03583593574070
SSP1148:0:Tyes21022
SSP292414:2:Tyes-0---
SSP321327:0:Tyes-1-00
SSP321332:0:Tyes-1-00
SSP644076:3:Fyes12410124124
SSP94122:1:Tyes0----
SSUI391295:0:Tyes--0--
SSUI391296:0:Tyes3-0-3
STHE292459:0:Tyes01200
STRO369723:0:Tyes9109099089100
STYP99287:1:Tyes0396397395395
TCRU317025:0:Tyes-0---
TDEN243275:0:Tyes0171817180-
TFUS269800:0:Tyes01200
TKOD69014:0:Tyes-0---
TLET416591:0:Tyes-1-00
TMAR243274:0:Tyes-0---
TPET390874:0:Tno-0---
TPSE340099:0:Tyes-01224--
TSP1755:0:Tyes-0780--
TSP28240:0:Tyes-0---
TTEN273068:0:Tyes-14300--
TWHI203267:0:Tyes-1200
TWHI218496:0:Tno-1200
UMET351160:0:Tyes--0--
VCHO:0:Tyes0615614616616
VCHO345073:1:Tno21991022
VFIS312309:1:Tyes0--00
VPAR223926:0:Tyes0217-216216
VVUL196600:1:Tyes0--00
VVUL216895:0:Tno0---0
XAUT78245:1:Tyes0----
YENT393305:1:Tyes02804280328052805
YPES187410:5:Tno0-184118431843
YPES214092:3:Tno1769-200
YPES349746:2:Tno0-213421362136
YPES360102:3:Tyes2093-200
YPES377628:2:Tno0-177817801780
YPES386656:2:Tno--022
YPSE273123:2:Tno0-826824824
YPSE349747:2:Tno879-022



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