CANDIDATE ID: 236

CANDIDATE ID: 236

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9962820e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10298 (fepG) (b0589)
   Products of gene:
     - FEPG-MONOMER (FepG)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10296 (fepD) (b0590)
   Products of gene:
     - FEPD-MONOMER (FepD)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10295 (fepC) (b0588)
   Products of gene:
     - FEPC-MONOMER (FepC)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10290 (fecE) (b4287)
   Products of gene:
     - FECE-MONOMER (FecE)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10289 (fecD) (b4288)
   Products of gene:
     - FECD-MONOMER (FecD)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 182
Effective number of orgs (counting one per cluster within 468 clusters): 118

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TWHI218496 ncbi Tropheryma whipplei TW08/274
TWHI203267 ncbi Tropheryma whipplei Twist4
TLET416591 ncbi Thermotoga lettingae TMO4
TFUS269800 ncbi Thermobifida fusca YX5
TDEN243275 ncbi Treponema denticola ATCC 354054
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STRO369723 ncbi Salinispora tropica CNB-4404
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP644076 Silicibacter sp. TrichCH4B5
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)4
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSP1148 ncbi Synechocystis sp. PCC 68035
SSON300269 ncbi Shigella sonnei Ss0465
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153055
SPRO399741 ncbi Serratia proteamaculans 5685
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1975
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2274
SAVE227882 ncbi Streptomyces avermitilis MA-46805
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
SARE391037 ncbi Salinispora arenicola CNS-2054
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSP101510 ncbi Rhodococcus jostii RHA14
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332094
RETL347834 ncbi Rhizobium etli CFN 424
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-15
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NSP103690 ncbi Nostoc sp. PCC 71205
NFAR247156 ncbi Nocardia farcinica IFM 101525
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MAQU351348 ncbi Marinobacter aquaeolei VT85
LXYL281090 ncbi Leifsonia xyli xyli CTCB074
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LPLA220668 ncbi Lactobacillus plantarum WCFS15
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LINN272626 ncbi Listeria innocua Clip112625
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP290400 ncbi Jannaschia sp. CCS14
HSP64091 ncbi Halobacterium sp. NRC-14
HSAL478009 ncbi Halobacterium salinarum R14
HMAR272569 ncbi Haloarcula marismortui ATCC 430494
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FSP1855 Frankia sp. EAN1pec4
FALN326424 ncbi Frankia alni ACN14a4
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DRAD243230 ncbi Deinococcus radiodurans R15
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DGEO319795 ncbi Deinococcus geothermalis DSM 113004
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CTET212717 ncbi Clostridium tetani E885
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT5
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3825
CMIC31964 ncbi Clavibacter michiganensis sepedonicus5
CJEI306537 ncbi Corynebacterium jeikeium K4115
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130325
CEFF196164 ncbi Corynebacterium efficiens YS-3145
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131295
CDIF272563 ncbi Clostridium difficile 6305
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto5
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
CBOT441771 ncbi Clostridium botulinum A str. Hall5
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BXEN266265 ncbi Burkholderia xenovorans LB4004
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BSUB ncbi Bacillus subtilis subtilis 1685
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145795
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP1667 Arthrobacter sp.5
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
ANAE240017 Actinomyces oris MG14
AMAR329726 ncbi Acaryochloris marina MBIC110175
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
AAUR290340 ncbi Arthrobacter aurescens TC15


Names of the homologs of the genes in the group in each of these orgs
  EG10298   EG10296   EG10295   EG10290   EG10289   
YPSE349747 YPSIP31758_2442YPSIP31758_2444YPSIP31758_2444YPSIP31758_3804
YPSE273123 YPTB1547YPTB1545YPTB1545YPTB0337
YPES386656 YPDSF_1441YPDSF_1443YPDSF_1443YPDSF_3690
YPES377628 YPN_2445YPN_2447YPN_2447YPN_3387
YPES360102 YPA_0829YPA_0827YPA_0827YPA_4002
YPES349746 YPANGOLA_A3184YPANGOLA_A3186YPANGOLA_A3186YPANGOLA_A0647
YPES214092 YPO1535YPO1533YPO1533YPO0280
YPES187410 Y2635Y2637Y2637Y0540
YENT393305 YE3620YE3619YE3621YE3621YE0328
VPAR223926 VPA1653VPA1652VPA1652VPA1653
VCHO345073 VC0395_A0307VC0395_A0306VC0395_A0308VC0395_A0308
VCHO VC0778VC0777VC0779VC0779
TWHI218496 TW0064TW0065TW0063TW0063
TWHI203267 TW059TW060TW058TW058
TLET416591 TLET_1250TLET_1249TLET_1249TLET_1250
TFUS269800 TFU_0337TFU_0338TFU_0336TFU_0336TFU_2385
TDEN243275 TDE_2357TDE_2357TDE_0625TDE_2357
STYP99287 STM0591STM0592STM0590STM0590
STRO369723 STROP_2554STROP_2553STROP_2555STROP_1628
STHE292459 STH1284STH1285STH1283STH1283STH1285
SSP644076 SCH4B_3539SCH4B_3538SCH4B_3664SCH4B_3664SCH4B_3538
SSP321332 CYB_2729CYB_2728CYB_2728CYB_2729
SSP321327 CYA_2033CYA_2032CYA_2032CYA_2033
SSP1148 SLR1317SLR1316SLR1318SLR1318SLR1317
SSON300269 SSO_0540SSO_0541SSO_0539SSO_4459SSO_4460
SSAP342451 SSP2071SSP2072SSP2073SSP2073SSP0711
SPRO399741 SPRO_3425SPRO_3424SPRO_3426SPRO_3426SPRO_2166
SMEL266834 SMA1742SMA1745SMA1741SMA1741SMC01511
SMED366394 SMED_2493SMED_2492SMED_2494SMED_2494SMED_4080
SLAC55218 SL1157_0503SL1157_0502SL1157_0504SL1157_0504
SHIGELLA FEPGFEPDFEPCFEPC
SHAE279808 SH2246SH2247SH2247SH0865
SGLO343509 SGP1_0036SGP1_0037SGP1_0035SGP1_0035
SFLE373384 SFV_0537SFV_0538SFV_0536SFV_0536
SFLE198214 AAN42152.1AAN42153.1AAN42151.1AAN42151.1
SERY405948 SACE_0412SACE_0411SACE_0413SACE_0413SACE_4374
SENT454169 SEHA_C0703SEHA_C0704SEHA_C0702SEHA_C0702
SENT321314 SCH_0622SCH_0623SCH_0621SCH_0621
SENT295319 SPA2143SPA2142SPA2144SPA2144
SENT220341 STY0635STY0636STY0634STY0634
SENT209261 T2277T2276T2278T2278
SDYS300267 SDY_0520SDY_0521SDY_0519SDY_4293SDY_4294
SCO SCO1786SCO1787SCO1785SCO0495SCO0997
SBOY300268 SBO_0450SBO_0451SBO_0449SBO_0449
SAVE227882 SAV6492SAV6491SAV6493SAV6493SAV6492
SAUR93062 SACOL0098SACOL0704SACOL0704SACOL2165
SAUR93061 SAOUHSC_00072SAOUHSC_00652SAOUHSC_00652SAOUHSC_02427
SAUR426430 NWMN_0058NWMN_0616NWMN_0616NWMN_2076
SAUR418127 SAHV_0113SAHV_0644SAHV_0644SAHV_2159
SAUR367830 SAUSA300_0116SAUSA300_0633SAUSA300_0633SAUSA300_2134
SAUR359787 SAURJH1_0105SAURJH1_0685SAURJH1_0685SAURJH1_2244
SAUR359786 SAURJH9_0101SAURJH9_0670SAURJH9_0670SAURJH9_2206
SAUR282459 SAS0088SAS0612SAS0612SAS2076
SAUR282458 SAR0117SAR0657SAR0657SAR2266
SAUR273036 SAB2056CSAB0053CSAB0596SAB0596SAB2056C
SAUR196620 MW0087MW0609MW0609MW2101
SAUR158879 SA0110SA0602SA0602SA1977
SAUR158878 SAV0114SAV0647SAV0647SAV2175
SARE391037 SARE_2743SARE_2742SARE_2744SARE_2744
RXYL266117 RXYL_0415RXYL_0414RXYL_0416RXYL_0416RXYL_0415
RSPH349102 RSPH17025_3333RSPH17025_3332RSPH17025_3334RSPH17025_3334RSPH17025_1384
RSPH349101 RSPH17029_3059RSPH17029_3060RSPH17029_3058RSPH17029_3058RSPH17029_3060
RSPH272943 RSP_3414RSP_3415RSP_3413RSP_3413RSP_3415
RSP101510 RHA1_RO07252RHA1_RO07253RHA1_RO07251RHA1_RO07251
RSAL288705 RSAL33209_3347RSAL33209_1683RSAL33209_2862RSAL33209_1681
RETL347834 RHE_CH03270RHE_CH03270RHE_PE00282RHE_CH03270
PSYR205918 PSYR_2592PSYR_2591PSYR_2593PSYR_0664PSYR_0665
PSP296591 BPRO_4778BPRO_4777BPRO_4777BPRO_4778
PPUT76869 PPUTGB1_1806PPUTGB1_1805PPUTGB1_1803PPUTGB1_1803PPUTGB1_1805
PMUL272843 PM0129PM0128PM0128PM0129
PMEN399739 PMEN_4564PMEN_4564PMEN_2860PMEN_2866
PLUM243265 PLU4449PLU4624PLU4626PLU4450PLU4449
PFLU220664 PFL_3625PFL_3624PFL_3622PFL_3622PFL_3624
PCRY335284 PCRYO_1284PCRYO_1285PCRYO_1285PCRYO_1284
PAER208964 PA4161PA4160PA4158PA4158PA4160
PAER208963 PA14_10140PA14_10160PA14_10180PA14_10180PA14_10160
OIHE221109 OB0261OB0260OB0262OB0450OB0453
OANT439375 OANT_4082OANT_2826OANT_4085OANT_4085OANT_2826
NSP103690 ALL2585ALL2586ALL2584ALL2584ALL2585
NFAR247156 NFA25200NFA25210NFA25190NFA25190NFA18240
MSP400668 MMWYL1_0465MMWYL1_3637MMWYL1_3639MMWYL1_0690MMWYL1_0691
MSP266779 MESO_1443MESO_0134MESO_0136MESO_0136MESO_1443
MSME246196 MSMEG_0013MSMEG_0012MSMEG_0015MSMEG_0015MSMEG_6063
MAQU351348 MAQU_3298MAQU_3297MAQU_3299MAQU_3299MAQU_0275
LXYL281090 LXX17240LXX17240LXX17230LXX17230
LWEL386043 LWE2377LWE1984LWE1986LWE1986LWE2377
LSPH444177 BSPH_1674BSPH_0991BSPH_1675BSPH_1675BSPH_0992
LPLA220668 LP_3106LP_3105LP_3104LP_3104LP_3106
LMON265669 LMOF2365_2401LMOF2365_1988LMOF2365_1990LMOF2365_1990LMOF2365_2401
LMON169963 LMO2430LMO1958LMO1960LMO1960LMO2430
LINN272626 LIN2524LIN2072LIN2074LIN2074LIN2524
KRAD266940 KRAD_1240KRAD_1241KRAD_1239KRAD_1239KRAD_1240
KPNE272620 GKPORF_B5026GKPORF_B5027GKPORF_B5025GKPORF_B5025GKPORF_B2423
JSP290400 JANN_2124JANN_2123JANN_2125JANN_2135
HSP64091 VNG2560GVNG2558GVNG2558GVNG1370G
HSAL478009 OE4591ROE4587ROE4587ROE2952F
HMAR272569 PNG7275PNG7276PNG7276RRNAC3374
HCHE349521 HCH_03793HCH_03792HCH_03795HCH_03795HCH_03457
HAUR316274 HAUR_1736HAUR_1735HAUR_1737HAUR_1737HAUR_1736
GTHE420246 GTNG_1319GTNG_1318GTNG_1320GTNG_0175GTNG_1319
GKAU235909 GK1460GK1459GK1461GK1461GK1460
FSP1855 FRANEAN1_3046FRANEAN1_5947FRANEAN1_3047FRANEAN1_3047
FALN326424 FRAAL4162FRAAL4163FRAAL5294FRAAL5294
ESP42895 ENT638_1121ENT638_1122ENT638_1120ENT638_1120ENT638_1738
EFER585054 EFER_2505EFER_2504EFER_2506EFER_2506
EFAE226185 EF_0193EF_0192EF_0191EF_0192
ECOO157 FEPGFEPDFEPCFEPCZ4384
ECOL83334 ECS0628ECS0629ECS0627ECS0627ECS3915
ECOL585397 ECED1_0586ECED1_0587ECED1_0585ECED1_5151ECED1_5153
ECOL585057 ECIAI39_0566ECIAI39_0567ECIAI39_0565ECIAI39_4765ECIAI39_4766
ECOL585056 ECUMN_0683ECUMN_0684ECUMN_0682ECUMN_4855ECUMN_4857
ECOL585055 EC55989_0581EC55989_0582EC55989_0580EC55989_4959EC55989_4961
ECOL585035 ECS88_0628ECS88_0629ECS88_0627ECS88_4860ECS88_4861
ECOL585034 ECIAI1_0573ECIAI1_0574ECIAI1_0572ECIAI1_0572
ECOL481805 ECOLC_3055ECOLC_3054ECOLC_3056ECOLC_0739ECOLC_0740
ECOL469008 ECBD_3066ECBD_3065ECBD_3067ECBD_3751ECBD_3750
ECOL439855 ECSMS35_0609ECSMS35_0610ECSMS35_0607ECSMS35_0607ECSMS35_3321
ECOL413997 ECB_00556ECB_00557ECB_00555ECB_04153ECB_04154
ECOL409438 ECSE_0656ECSE_0657ECSE_0655ECSE_0655
ECOL405955 APECO1_1460APECO1_1459APECO1_1461APECO1_1461APECO1_3386
ECOL364106 UTI89_C0591UTI89_C0592UTI89_C0590UTI89_C0590UTI89_C3461
ECOL362663 ECP_0621ECP_0622ECP_0620ECP_0620ECP_3119
ECOL331111 ECE24377A_0609ECE24377A_0610ECE24377A_0607ECE24377A_4864ECE24377A_4865
ECOL316407 ECK0582:JW0581:B058ECK0583:JW0582:B0590ECK0581:JW0580:B0588ECK4277:JW4247:B4287ECK4278:JW4248:B4288
ECOL199310 C0676C0677C0675C0675C3773
ECAR218491 ECA2807ECA2808ECA2806ECA1073ECA1074
DRAD243230 DR_B0015DR_B0123DR_B0121DR_B0121DR_B0122
DHAF138119 DSY1004DSY1003DSY1005DSY3570DSY3571
DGEO319795 DGEO_2756DGEO_2759DGEO_2759DGEO_2758
CVIO243365 CV_2235CV_2236CV_2234CV_2234CV_1794
CTET212717 CTC_01196CTC_01196CTC_01197CTC_01197CTC_01196
CSP501479 CSE45_2871CSE45_0696CSE45_0698CSE45_0698CSE45_1083
CSAL290398 CSAL_1041CSAL_1042CSAL_2702CSAL_2702CSAL_1041
CPER289380 CPR_0796CPR_0795CPR_0797CPR_0797CPR_0796
CPER195103 CPF_0809CPF_0808CPF_0810CPF_0810CPF_0809
CPER195102 CPE0812CPE0811CPE0813CPE0813CPE0812
CNOV386415 NT01CX_1447NT01CX_1447NT01CX_1448NT01CX_1448NT01CX_1447
CMIC443906 CMM_2929CMM_2930CMM_2928CMM_2928CMM_2350
CMIC31964 CMS3064CMS3065CMS3063CMS3063CMS1571
CJEI306537 JK1773JK1772JK1818JK1806JK1294
CGLU196627 CG0590CG0591CG0589CG0589CG0778
CEFF196164 CE0685CE0686CE0684CE0684CE0694
CDIP257309 DIP1060DIP1061DIP1059DIP1059DIP0584
CDIF272563 CD2876CD2877CD2875CD2875CD2876
CBOT536232 CLM_0805CLM_0804CLM_0381CLM_0381CLM_0805
CBOT515621 CLJ_B0760CLJ_B0839CLJ_B0366CLJ_B0366CLJ_B0760
CBOT508765 CLL_A2114CLL_A2115CLL_A2113CLL_A2113CLL_A2114
CBOT498213 CLD_0078CLD_0079CLD_0440CLD_0440CLD_0078
CBOT441772 CLI_0757CLI_0756CLI_0383CLI_0383CLI_0757
CBOT441771 CLC_0742CLC_0741CLC_0371CLC_0371CLC_0742
CBOT441770 CLB_0727CLB_0726CLB_0356CLB_0356CLB_0727
CBOT36826 CBO0688CBO0687CBO0313CBO0313CBO0688
CBEI290402 CBEI_3761CBEI_3762CBEI_3760CBEI_2141
CACE272562 CAC0789CAC0791CAC0791CAC0788
BXEN266265 BXE_B0521BXE_B0520BXE_B0520BXE_B0521
BWEI315730 BCERKBAB4_0531BCERKBAB4_0530BCERKBAB4_0532BCERKBAB4_5174BCERKBAB4_5175
BTHU412694 BALH_0555BALH_0554BALH_0556BALH_4877BALH_4879
BTHU281309 BT9727_0527BT9727_0526BT9727_0528BT9727_5061BT9727_5062
BSUB BSU01610BSU08450BSU32940BSU33290BSU07500
BPUM315750 BPUM_2909BPUM_2992BPUM_2949BPUM_2990BPUM_2991
BLIC279010 BL01088BL02185BL02183BL00705BL01088
BHAL272558 BH3789BH3790BH1039BH1081BH1082
BCLA66692 ABC1083ABC1082ABC1084ABC1084ABC1083
BCER572264 BCA_0651BCA_0650BCA_0652BCA_5531BCA_5532
BCER405917 BCE_0685BCE_0684BCE_0686BCE_5510BCE_5511
BCER315749 BCER98_3903BCER98_3904BCER98_3902BCER98_3902BCER98_3903
BCER288681 BCE33L0527BCE33L0526BCE33L0528BCE33L5078BCE33L5079
BCER226900 BC_0618BC_3468BC_0619BC_5381BC_5382
BANT592021 BAA_0699BAA_0698BAA_0700BAA_5655BAA_5656
BANT568206 BAMEG_3970BAMEG_3971BAMEG_3969BAMEG_5673BAMEG_5674
BANT261594 GBAA0617GBAA0616GBAA0618GBAA5629GBAA5630
BANT260799 BAS0583BAS0582BAS0584BAS5230BAS5231
BAMY326423 RBAM_030420RBAM_030430RBAM_030060RBAM_030410RBAM_030420
BAMB398577 BAMMC406_1554BAMMC406_1553BAMMC406_1553BAMMC406_1554
BAMB339670 BAMB_1695BAMB_1532BAMB_1532BAMB_1533
AVAR240292 AVA_2828AVA_2830AVA_2830AVA_2828
ASP1667 ARTH_3933ARTH_3934ARTH_3932ARTH_3932ARTH_3934
AORE350688 CLOS_2429CLOS_2430CLOS_2428CLOS_2810CLOS_0319
ANAE240017 ANA_1458ANA_2754ANA_2757ANA_1461
AMAR329726 AM1_3414AM1_A0163AM1_A0161AM1_A0161AM1_A0162
ACAU438753 AZC_0185AZC_0184AZC_0183AZC_0183
AAUR290340 AAUR_0558AAUR_0559AAUR_0557AAUR_3763AAUR_3765


Organism features enriched in list (features available for 171 out of the 182 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 4.662e-71517
Arrangment:Filaments 0.0074933710
Arrangment:Pairs 1.711e-1366112
Disease:Anthrax 0.007218544
Disease:Botulism 0.002082055
Disease:Bubonic_plague 0.000597966
Disease:Dysentery 0.000597966
Disease:Opportunistic_infections 0.002082055
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0003908911
Disease:Urinary_tract_infection 0.007218544
Endospores:Yes 2.383e-164353
GC_Content_Range4:0-40 0.004606050213
GC_Content_Range7:30-40 0.002888436166
GC_Content_Range7:50-60 0.001350044107
GC_Content_Range7:70-100 0.0003908911
Genome_Size_Range5:0-2 4.062e-252155
Genome_Size_Range5:4-6 1.161e-1189184
Genome_Size_Range5:6-10 0.00156922347
Genome_Size_Range9:0-1 0.0044767227
Genome_Size_Range9:4-5 1.604e-75096
Genome_Size_Range9:5-6 0.00048493988
Gram_Stain:Gram_Neg 0.000111678333
Gram_Stain:Gram_Pos 6.047e-1481150
Habitat:Aquatic 0.00044781491
Habitat:Host-associated 0.001672746206
Habitat:Multiple 3.875e-880178
Habitat:Terrestrial 0.00416631631
Motility:Yes 0.000116898267
Optimal_temp.:- 0.008310364257
Optimal_temp.:25-35 0.0052277914
Optimal_temp.:30-37 1.446e-71618
Oxygen_Req:Anaerobic 0.002777719102
Oxygen_Req:Facultative 7.901e-989201
Pathogenic_in:Human 8.536e-788213
Pathogenic_in:No 0.005297754226
Shape:Branched_filament 0.007218544
Shape:Rod 5.767e-10134347
Shape:Spiral 0.0000755134
Temp._range:Hyperthermophilic 0.0028522123
Temp._range:Mesophilic 0.0000405155473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 362
Effective number of orgs (counting one per cluster within 468 clusters): 303

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP61
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB271
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP292414 ncbi Ruegeria sp. TM10401
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111701
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1340
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N1
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10298   EG10296   EG10295   EG10290   EG10289   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245 XAUT_4193
WSUC273121
WPIP955
WPIP80849
VVUL216895 VV2_1011
VEIS391735
UURE95667
UURE95664
UPAR505682
TVOL273116
TTUR377629
TTHE300852
TTHE262724 TT_P0178
TSP28240 TRQ2_0758
TROS309801
TPET390874 TPET_0734
TPEN368408
TPAL243276
TMAR243274 TM_0190
TERY203124
TELO197221
TDEN326298
TDEN292415
TCRU317025 TCR_0179
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391295 SSU05_0647
SSP94122 SHEWANA3_3240
SSP84588
SSP64471
SSP387093
SSP292414 TM1040_0344
SSP1131
SSOL273057
SSED425104
SPEA398579
SONE211586 SO_3674
SMUT210007
SMAR399550
SLOI323850
SHAL458817
SGOR29390
SFUM335543 SFUM_2134
SELO269084
SDEN318161 SDEN_1117
SDEG203122
SBAL402882 SHEW185_1016
SBAL399599 SBAL195_1049
SALA317655
SACI56780
SACI330779
RTYP257363
RSOL267608
RRUB269796 RRU_A0490
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057 RPD_2349
RPAL316056 RPC_4254
RPAL316055
RPAL258594
RMAS416276
RFER338969
RFEL315456
REUT381666 H16_A2971
REUT264198
RDEN375451 RD1_4190
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811
PSP312153
PSP117
PRUM264731
PPUT351746
PPUT160488
PPEN278197
PNAP365044
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHAL326442
PGIN242619
PFUR186497
PFLU205922
PENT384676
PDIS435591
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844 PAB0677
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSP35761
NSEN222891
NPHA348780 NP3816A
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307 MTHE_0443
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP409
MSP189918
MSP164757
MSP164756
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358 MLAB_1378
MKAN190192
MJAN243232 MJ_0087
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_3883
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937 MA2149
MABS561007
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
ILOI283942 IL0114
IHOS453591
HWAL362976
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761
HINF71421
HINF374930
HINF281310
HHEP235279
HDUC233412
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DRED349161
DPSY177439
DOLE96561
DNOD246195
DETH243164 DET_0685
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTHE226186
BSP376
BSP107806
BPET94624
BPER257313
BPAR257311
BLON206672
BJAP224911
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBRO257310
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977
ASP62928
ASP232721
APLE434271
APLE416269
APHA212042
APER272557
AMAR234826
ALAI441768
AFUL224325
AFER243159
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABOR393595
ABAU360910 BAV2654
ABAC204669
AAVE397945
AAEO224324


Organism features enriched in list (features available for 338 out of the 362 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.878e-63392
Arrangment:Pairs 2.104e-937112
Endospores:Yes 1.499e-10953
GC_Content_Range7:50-60 0.002985450107
GC_Content_Range7:70-100 0.0071401211
Genome_Size_Range5:0-2 1.279e-18134155
Genome_Size_Range5:4-6 1.697e-681184
Genome_Size_Range5:6-10 4.611e-71147
Genome_Size_Range9:0-1 0.00005522527
Genome_Size_Range9:1-2 1.227e-13109128
Genome_Size_Range9:4-5 0.00008283996
Genome_Size_Range9:6-8 7.983e-6938
Gram_Stain:Gram_Neg 4.348e-6219333
Gram_Stain:Gram_Pos 2.569e-1743150
Habitat:Aquatic 0.00006116991
Habitat:Multiple 0.000311585178
Habitat:Terrestrial 0.0005951931
Motility:Yes 0.0066232142267
Optimal_temp.:35-37 0.00075731313
Oxygen_Req:Anaerobic 0.000353874102
Oxygen_Req:Facultative 1.564e-1375201
Oxygen_Req:Microaerophilic 0.00398491618
Pathogenic_in:Human 1.226e-1087213
Pathogenic_in:No 0.0000963152226
Shape:Coccus 0.00209993682
Shape:Rod 0.0000124177347
Shape:Sphere 0.00253821719
Shape:Spiral 1.535e-63234
Temp._range:Hyperthermophilic 0.00793061923
Temp._range:Mesophilic 0.0001722258473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 2
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TWHI218496 ncbi Tropheryma whipplei TW08/27 0.00569081994
TWHI203267 ncbi Tropheryma whipplei Twist 0.00616262034


Names of the homologs of the genes in the group in each of these orgs
  EG10298   EG10296   EG10295   EG10290   EG10289   
TWHI218496 TW0064TW0065TW0063TW0063
TWHI203267 TW059TW060TW058TW058


Organism features enriched in list (features available for 2 out of the 2 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Whipple's_disease 5.894e-622
Genome_Size_Range9:0-1 0.0020689227



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241330.4970
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121890.4787
RIBOKIN-PWY (ribose degradation)2791400.4152
RHAMCAT-PWY (rhamnose degradation)91680.4139
IDNCAT-PWY (L-idonate degradation)2461290.4126
MANNIDEG-PWY (mannitol degradation I)99710.4063



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10296   EG10295   EG10290   EG10289   
EG102980.9997860.9997860.9996850.999501
EG102960.9997480.9996450.999433
EG102950.9998450.999316
EG102900.999537
EG10289



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PAIRWISE BLAST SCORES:

  EG10298   EG10296   EG10295   EG10290   EG10289   
EG102980.0f0----
EG10296-0.0f0---
EG10295--0.0f07.3e-55-
EG10290--3.2e-540.0f0-
EG10289----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2001 (ferric dicitrate uptake system) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.400, average score: 0.720)
  Genes in pathway or complex:
             0.9197 0.7384 EG10286 (fecA) EG10286-MONOMER (outer membrane receptor; citrate-dependent iron transport, outer membrane receptor)
             0.4497 0.3216 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.2685 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.6027 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
   *in cand* 0.9997 0.9995 EG10290 (fecE) FECE-MONOMER (FecE)
             0.9995 0.9992 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9996 0.9993 EG10289 (fecD) FECD-MONOMER (FecD)
             0.9991 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9997 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9998 0.9995 EG10298 (fepG) FEPG-MONOMER (FepG)

- ABC-9-CPLX (iron dicitrate ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.400, average score: 0.999)
  Genes in pathway or complex:
             0.9991 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
   *in cand* 0.9996 0.9993 EG10289 (fecD) FECD-MONOMER (FecD)
             0.9995 0.9992 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9997 0.9995 EG10290 (fecE) FECE-MONOMER (FecE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9993 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9997 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9998 0.9995 EG10298 (fepG) FEPG-MONOMER (FepG)

- CPLX0-1944 (Ferric Enterobactin Transport System) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.600, average score: 0.650)
  Genes in pathway or complex:
             0.4497 0.3216 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.2685 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.6027 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
             0.9785 0.9069 EG10293 (fepA) EG10293-MONOMER (FepA, outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D)
   *in cand* 0.9997 0.9993 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9997 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9998 0.9995 EG10298 (fepG) FEPG-MONOMER (FepG)
             0.9992 0.9989 EG10294 (fepB) FEPB-MONOMER (FepB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9997 0.9995 EG10290 (fecE) FECE-MONOMER (FecE)

- ABC-10-CPLX (ferric enterobactin ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.600, average score: 1.000)
  Genes in pathway or complex:
             0.9992 0.9989 EG10294 (fepB) FEPB-MONOMER (FepB)
   *in cand* 0.9998 0.9995 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9997 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9997 0.9993 EG10295 (fepC) FEPC-MONOMER (FepC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9997 0.9995 EG10290 (fecE) FECE-MONOMER (FecE)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10295 EG10296 EG10298 (centered at EG10298)
EG10289 EG10290 (centered at EG10289)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10298   EG10296   EG10295   EG10290   EG10289   
187/623213/623223/623227/623205/623
AAUR290340:2:Tyes12031353137
ABAU360910:0:Tyes---0-
ACAU438753:0:Tyes2100-
AEHR187272:0:Tyes-0--0
AHYD196024:0:Tyes-2-0-
AMAR329726:8:Tyes-2001
AMAR329726:9:Tyes0----
AMET293826:0:Tyes--00-
ANAE240017:0:Tyes0118811903-
AORE350688:0:Tyes21782179217725580
ASAL382245:5:Tyes-200-
ASP1667:3:Tyes12002
ASP76114:2:Tyes-0--0
AVAR240292:3:Tyes0-220
BABO262698:0:Tno---0-
BABO262698:1:Tno-0--0
BAMB339670:3:Tno162-001
BAMB398577:3:Tno1-001
BAMY326423:0:Tyes363703536
BANT260799:0:Tno10246604661
BANT261594:2:Tno10246244625
BANT568206:2:Tyes12016351636
BANT592021:2:Tno10248544855
BBAC360095:0:Tyes-0--0
BCAN483179:1:Tno-0--0
BCEN331271:2:Tno--001
BCEN331272:3:Tyes--001
BCER226900:1:Tyes02793146614662
BCER288681:0:Tno10245684569
BCER315749:1:Tyes12001
BCER405917:1:Tyes10245754576
BCER572264:1:Tno10247734774
BCLA66692:0:Tyes10221
BHAL272558:0:Tyes2769277004243
BHEN283166:0:Tyes-0--0
BLIC279010:0:Tyes02282228023260
BMAL243160:1:Tno0-11-
BMAL320388:1:Tno--00-
BMAL320389:1:Tyes--00-
BMEL224914:1:Tno-0--0
BMEL359391:1:Tno-0--0
BOVI236:1:Tyes-0--0
BPSE272560:1:Tyes--00-
BPSE320372:1:Tno--00-
BPSE320373:1:Tno--00-
BPUM315750:0:Tyes082398081
BQUI283165:0:Tyes-0--0
BSP36773:2:Tyes--001
BSUB:0:Tyes071833173354625
BSUI204722:1:Tyes-0--0
BSUI470137:1:Tno-0--0
BTHA271848:1:Tno--00-
BTHU281309:1:Tno10244984499
BTHU412694:1:Tno10241584159
BTRI382640:1:Tyes-0--0
BVIE269482:7:Tyes--001
BWEI315730:4:Tyes10245774578
BXEN266265:1:Tyes0-110
CACE272562:1:Tyes-1330
CBEI290402:0:Tyes1572157315710-
CBOT36826:1:Tno37237100372
CBOT441770:0:Tyes35935800359
CBOT441771:0:Tno36035900360
CBOT441772:1:Tno35935800359
CBOT498213:1:Tno35435300354
CBOT508765:1:Tyes12001
CBOT515621:2:Tyes37945800379
CBOT536232:0:Tno40740600407
CDES477974:0:Tyes00--0
CDIF272563:1:Tyes12001
CDIP257309:0:Tyes4694704684680
CEFF196164:0:Fyes120010
CGLU196627:0:Tyes1200169
CJEI306537:0:Tyes4904895355230
CMIC31964:2:Tyes14081409140714070
CMIC443906:2:Tyes5915925905900
CNOV386415:0:Tyes00110
CPER195102:1:Tyes10221
CPER195103:0:Tno10221
CPER289380:3:Tyes10221
CSAL290398:0:Tyes01169116910
CSP501479:8:Fyes2142022381
CTET212717:0:Tyes00110
CVIO243365:0:Tyes4474484464460
DETH243164:0:Tyes-0---
DGEO319795:0:Tyes-3001
DHAF138119:0:Tyes10226032604
DRAD243230:1:Tyes095939394
DSHI398580:5:Tyes-0--0
DSP216389:0:Tyes-0--0
DSP255470:0:Tno-0--0
ECAR218491:0:Tyes17401741173901
ECOL199310:0:Tno12003037
ECOL316407:0:Tno12036863687
ECOL331111:6:Tno12040804081
ECOL362663:0:Tno12002500
ECOL364106:1:Tno12002867
ECOL405955:2:Tyes12002582
ECOL409438:6:Tyes1200-
ECOL413997:0:Tno12036363637
ECOL439855:4:Tno12002623
ECOL469008:0:Tno102682681
ECOL481805:0:Tno23282327232901
ECOL585034:0:Tno1200-
ECOL585035:0:Tno12040754076
ECOL585055:0:Tno12043074309
ECOL585056:2:Tno12041614163
ECOL585057:0:Tno12042124213
ECOL585397:0:Tno12044364438
ECOL83334:0:Tno12003367
ECOLI:0:Tno12037673768
ECOO157:0:Tno12003378
EFAE226185:3:Tyes210-1
EFER585054:1:Tyes1022-
ESP42895:1:Tyes1200632
FALN326424:0:Tyes0111021102-
FSP1855:0:Tyes0285011-
GKAU235909:1:Tyes10221
GTHE420246:1:Tyes11301129113101130
GVIO251221:0:Tyes0---0
HAUR316274:2:Tyes10221
HCHE349521:0:Tyes3213203223220
HHAL349124:0:Tyes-0--575
HMAR272569:7:Tyes0-11-
HMAR272569:8:Tyes----0
HMUK485914:1:Tyes1-00-
HSAL478009:4:Tyes963-9629620
HSP64091:2:Tno939-9389380
ILOI283942:0:Tyes-0---
JSP290400:1:Tyes102-12
KPNE272620:2:Tyes25412542254025400
KRAD266940:2:Fyes10221
LINN272626:1:Tno473022473
LMON169963:0:Tno496022496
LMON265669:0:Tyes409022409
LPLA220668:0:Tyes21002
LSAK314315:0:Tyes-1-02
LSPH444177:1:Tyes66706686681
LWEL386043:0:Tyes393022393
LXYL281090:0:Tyes1100-
MACE188937:0:Tyes-0---
MAQU351348:2:Tyes29882987298929890
MGIL350054:3:Tyes-0---
MJAN243232:2:Tyes0----
MLAB410358:0:Tyes---0-
MLOT266835:2:Tyes00---
MSME246196:0:Tyes10225998
MSP266779:3:Tyes13200221320
MSP400668:0:Tyes032183220224225
MTHE349307:0:Tyes0----
NFAR247156:2:Tyes7027037017010
NPHA348780:2:Tyes----0
NSP103690:6:Tyes12001
OANT439375:4:Tyes12500125312530
OIHE221109:0:Tyes102190193
PABY272844:0:Tyes----0
PACN267747:0:Tyes257344--0
PAER208963:0:Tyes01331
PAER208964:0:Tno32002
PCAR338963:0:Tyes00---
PCRY335284:1:Tyes0-110
PFLU216595:1:Tyes--001
PFLU220664:0:Tyes32002
PHOR70601:0:Tyes0---0
PING357804:0:Tyes0---0
PLUM243265:0:Fyes018118310
PMEN399739:0:Tyes172517250-6
PMUL272843:1:Tyes1-001
PPRO298386:1:Tyes-200-
PPUT76869:0:Tno32002
PSP296591:2:Tyes1-001
PSYR205918:0:Tyes19301929193101
PSYR223283:2:Tyes--001
RCAS383372:0:Tyes0---0
RDEN375451:4:Tyes0----
RETL347834:3:Tyes---0-
RETL347834:5:Tyes00--0
REUT381666:2:Tyes----0
RLEG216596:6:Tyes645645--0
RMET266264:1:Tyes0----
RMET266264:2:Tyes----0
RPAL316056:0:Tyes-0---
RPAL316057:0:Tyes----0
RRUB269796:1:Tyes----0
RSAL288705:0:Tyes1666211810-
RSP101510:3:Fyes1200-
RSP357808:0:Tyes0---0
RSPH272943:3:Tyes12002
RSPH349101:1:Tno12002
RSPH349102:4:Tyes1022-
RSPH349102:5:Tyes----0
RXYL266117:0:Tyes10221
SAGA205921:0:Tno--00-
SAGA208435:0:Tno--00-
SAGA211110:0:Tyes--00-
SARE391037:0:Tyes1022-
SAUR158878:1:Tno-05505502134
SAUR158879:1:Tno-05255252014
SAUR196620:0:Tno-05425422092
SAUR273036:0:Tno200305315312003
SAUR282458:0:Tno-05385382133
SAUR282459:0:Tno-05495492066
SAUR359786:1:Tno-05855852157
SAUR359787:1:Tno-05755752105
SAUR367830:3:Tno-05035031937
SAUR418127:0:Tyes-05485482122
SAUR426430:0:Tno-05745742089
SAUR93061:0:Fno-05475472284
SAUR93062:1:Tno-05935932018
SAVE227882:1:Fyes10221
SBAL399599:3:Tyes----0
SBAL402882:1:Tno----0
SBOY300268:1:Tyes1200-
SCO:2:Fyes1296129712950496
SDEN318161:0:Tyes0----
SDYS300267:1:Tyes12035353536
SENT209261:0:Tno1022-
SENT220341:0:Tno1200-
SENT295319:0:Tno1022-
SENT321314:2:Tno1200-
SENT454169:2:Tno1200-
SEPI176279:1:Tyes--001439
SEPI176280:0:Tno--001402
SERY405948:0:Tyes10223914
SFLE198214:0:Tyes1200-
SFLE373384:0:Tno1200-
SFUM335543:0:Tyes----0
SGLO343509:2:Tyes1200-
SHAE279808:0:Tyes-1429143014300
SHIGELLA:0:Tno1200-
SLAC55218:1:Fyes1022-
SMED366394:2:Tyes----0
SMED366394:3:Tyes1022-
SMEL266834:0:Tyes1200-
SMEL266834:2:Tyes----0
SONE211586:1:Tyes----0
SPNE1313:0:Tyes-022-
SPNE170187:0:Tyes-033-
SPNE171101:0:Tno-033-
SPNE487213:0:Tno-022-
SPNE487214:0:Tno-022-
SPNE488221:0:Tno-022-
SPRO399741:1:Tyes12761275127712770
SPYO160490:0:Tno--00-
SPYO186103:0:Tno--00-
SPYO193567:0:Tno--00-
SPYO198466:0:Tno--00-
SPYO286636:0:Tno--00-
SPYO293653:0:Tno--00-
SPYO319701:0:Tyes--00-
SPYO370551:0:Tno--00-
SPYO370552:0:Tno--00-
SPYO370553:0:Tno--00-
SPYO370554:0:Tyes--00-
SRUB309807:1:Tyes14741474--0
SSAP342451:2:Tyes14091410141114110
SSON300269:1:Tyes12037133714
SSP1148:0:Tyes10221
SSP292414:2:Tyes0----
SSP321327:0:Tyes1-001
SSP321332:0:Tyes1-001
SSP644076:3:Fyes101241240
SSP94122:1:Tyes----0
SSUI391295:0:Tyes-0---
SSUI391296:0:Tyes-0-3-
STHE292459:0:Tyes12002
STRO369723:0:Tyes9099089100-
STYP99287:1:Tyes1200-
TCRU317025:0:Tyes0----
TDEN243275:0:Tyes171817180-1718
TFUS269800:0:Tyes12002075
TKOD69014:0:Tyes0---0
TLET416591:0:Tyes1-001
TMAR243274:0:Tyes0----
TPET390874:0:Tno0----
TPSE340099:0:Tyes01224---
TSP1755:0:Tyes0780---
TSP28240:0:Tyes0----
TTEN273068:0:Tyes14300---
TTHE262724:0:Tyes----0
TWHI203267:0:Tyes1200-
TWHI218496:0:Tno1200-
UMET351160:0:Tyes-0--0
VCHO:0:Tyes1022-
VCHO345073:1:Tno1022-
VFIS312309:1:Tyes--00814
VPAR223926:0:Tyes1-001
VVUL196600:1:Tyes--00-
VVUL216895:0:Tno---0-
XAUT78245:1:Tyes----0
YENT393305:1:Tyes31883187318931890
YPES187410:5:Tno-2102210421040
YPES214092:3:Tno-1213121112110
YPES349746:2:Tno-2477247924790
YPES360102:3:Tyes-2003223
YPES377628:2:Tno-022964
YPES386656:2:Tno-0222276
YPSE273123:2:Tno-1234123212320
YPSE349747:2:Tno-0221349



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