CANDIDATE ID: 240

CANDIDATE ID: 240

NUMBER OF GENES: 5
AVERAGE SCORE:    9.9963010e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7424 (ftsB) (b2748)
   Products of gene:
     - G7424-MONOMER (essential cell division protein FtsB)

- G7423 (ispD) (b2747)
   Products of gene:
     - G7423-MONOMER (4-diphosphocytidyl-2C-methyl-D-erythritol synthetase monomer)
     - CPLX0-234 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase)
       Reactions:
        2-C-methyl-D-erythritol-4-phosphate + CTP + H+  =  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol + diphosphate
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG11816 (ispF) (b2746)
   Products of gene:
     - EG11816-MONOMER (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase monomer)
     - CPLX0-721 (2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase)
       Reactions:
        2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol  ->  CMP + 2-C-methyl-D-erythritol-2,4-cyclodiphosphate
         In pathways
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG10810 (pyrG) (b2780)
   Products of gene:
     - CTPSYN-MONOMER (PyrG)
     - CTPSYN-CPLX (CTP synthetase)
       Reactions:
        ATP + UTP + L-glutamine + H2O  ->  ADP + phosphate + CTP + L-glutamate + 3 H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)
         PWY-5687 (pyrimidine ribonucleotides interconversion)

- EG10258 (eno) (b2779)
   Products of gene:
     - ENOLASE-MONOMER (Eno)
     - ENOLASE-CPLX (enolase)
       Reactions:
        2-phospho-D-glycerate  =  phosphoenolpyruvate + H2O
         In pathways
         PWY-5464 (PWY-5464)
         PWY-6146 (PWY-6146)
         GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)
         GLYCOLYSIS-TCA-GLYOX-BYPASS (superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass)
         ANAEROFRUCAT-PWY (ANAEROFRUCAT-PWY)
         P441-PWY (P441-PWY)
         PWY-3801 (PWY-3801)
         NPGLUCAT-PWY (NPGLUCAT-PWY)
         ANARESP1-PWY (respiration (anaerobic))
         PWY-2221 (PWY-2221)
         PWY-1042 (PWY-1042)
         P122-PWY (P122-PWY)
         PWY-1622 (PWY-1622)
         GLUCONEO-PWY (gluconeogenesis I)
         P341-PWY (P341-PWY)
         PWY-6142 (PWY-6142)
         ANAGLYCOLYSIS-PWY (ANAGLYCOLYSIS-PWY)
         GLYCOLYSIS (glycolysis I)
         P124-PWY (P124-PWY)
         PWY-5723 (PWY-5723)
         PWY-5484 (PWY-5484)
     - CPLX0-2381 (degradosome)



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ORGANISMS CONTAINING AT LEAST 4 GENES FROM THE GROUP:

Total number of orgs: 303
Effective number of orgs (counting one per cluster within 468 clusters): 216

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317585
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329535
YPES386656 ncbi Yersinia pestis Pestoides F5
YPES377628 ncbi Yersinia pestis Nepal5165
YPES360102 ncbi Yersinia pestis Antiqua5
YPES349746 ncbi Yersinia pestis Angola5
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 105
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80815
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen4
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT25
STHE292459 ncbi Symbiobacterium thermophilum IAM 148634
SSP94122 ncbi Shewanella sp. ANA-35
SSP84588 ncbi Synechococcus sp. WH 81024
SSP64471 ncbi Synechococcus sp. CC93114
SSP644076 Silicibacter sp. TrichCH4B4
SSP292414 ncbi Ruegeria sp. TM10404
SSON300269 ncbi Shigella sonnei Ss0465
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5685
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SMEL266834 ncbi Sinorhizobium meliloti 10214
SMED366394 ncbi Sinorhizobium medicae WSM4194
SLOI323850 ncbi Shewanella loihica PV-45
SHIGELLA ncbi Shigella flexneri 2a str. 2457T5
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SFLE198214 ncbi Shigella flexneri 2a str. 3015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4765
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B675
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91505
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty25
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2275
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111704
RPAL316058 ncbi Rhodopseudomonas palustris HaA24
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA534
RPAL258594 ncbi Rhodopseudomonas palustris CGA0094
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38414
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 424
RDEN375451 ncbi Roseobacter denitrificans OCh 1144
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP56811 Psychrobacter sp.5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PMAR74547 ncbi Prochlorococcus marinus MIT 93134
PMAR167555 ncbi Prochlorococcus marinus NATL1A4
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13754
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO15
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OCAR504832 ncbi Oligotropha carboxidovorans OM54
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2554
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.4
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS104
MMAG342108 ncbi Magnetospirillum magneticum AMB-14
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA14
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1304
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
LINN272626 ncbi Listeria innocua Clip112624
LCHO395495 ncbi Leptothrix cholodnii SP-65
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1974
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5504
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785785
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS14
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GOXY290633 ncbi Gluconobacter oxydans 621H4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.5
EFER585054 ncbi Escherichia fergusonii ATCC 354695
ECOO157 ncbi Escherichia coli O157:H7 EDL9335
ECOL83334 Escherichia coli O157:H75
ECOL585397 ncbi Escherichia coli ED1a5
ECOL585057 ncbi Escherichia coli IAI395
ECOL585056 ncbi Escherichia coli UMN0265
ECOL585055 ncbi Escherichia coli 559895
ECOL585035 ncbi Escherichia coli S885
ECOL585034 ncbi Escherichia coli IAI15
ECOL481805 ncbi Escherichia coli ATCC 87395
ECOL469008 ncbi Escherichia coli BL21(DE3)5
ECOL439855 ncbi Escherichia coli SMS-3-55
ECOL413997 ncbi Escherichia coli B str. REL6065
ECOL409438 ncbi Escherichia coli SE115
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI895
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31105
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DRED349161 ncbi Desulfotomaculum reducens MI-14
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G204
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSP78 Caulobacter sp.4
CSP501479 Citreicella sp. SE454
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPHY357809 ncbi Clostridium phytofermentans ISDg4
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT4
CKLU431943 ncbi Clostridium kluyveri DSM 5554
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto4
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB154
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTRI382640 ncbi Bartonella tribocorum CIP 1054764
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234454
BSUI204722 ncbi Brucella suis 13304
BSUB ncbi Bacillus subtilis subtilis 1684
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.5
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BQUI283165 ncbi Bartonella quintana Toulouse4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis4
BMEL359391 ncbi Brucella melitensis biovar Abortus 23084
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M4
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1104
BHEN283166 ncbi Bartonella henselae Houston-14
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCIC186490 Candidatus Baumannia cicadellinicola4
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233654
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5834
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)5
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9414
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4495
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AHYD196024 Aeromonas hydrophila dhakensis5
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ACAU438753 ncbi Azorhizobium caulinodans ORS 5714
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  G7424   G7423   EG11816   EG10810   EG10258   
ZMOB264203 ZMO1128ZMO1128ZMO0462ZMO1608
YPSE349747 YPSIP31758_3300YPSIP31758_3299YPSIP31758_3298YPSIP31758_3317YPSIP31758_3316
YPSE273123 YPTB0769YPTB0770YPTB0771YPTB0754YPTB0755
YPES386656 YPDSF_2998YPDSF_2999YPDSF_3000YPDSF_2982YPDSF_2983
YPES377628 YPN_0731YPN_0732YPN_0733YPN_0715YPN_0716
YPES360102 YPA_2781YPA_2782YPA_2783YPA_2875YPA_2874
YPES349746 YPANGOLA_A0965YPANGOLA_A0964YPANGOLA_A0963YPANGOLA_A0980YPANGOLA_A0979
YPES214092 YPO3362YPO3361YPO3360YPO3377YPO3376
YPES187410 Y0827Y0828Y0829Y0813Y0814
YENT393305 YE0768YE0769YE0770YE0746YE0747
XORY360094 XOOORF_1706XOOORF_1707XOOORF_1708XOOORF_1702XOOORF_1705
XORY342109 XOO2813XOO2812XOO2811XOO2817XOO2814
XORY291331 XOO2962XOO2961XOO2960XOO2967XOO2963
XFAS405440 XFASM12_0617XFASM12_0618XFASM12_0619XFASM12_0614XFASM12_0616
XFAS183190 PD_0544PD_0545PD_0546PD_0541PD_0543
XFAS160492 XF1292XF1293XF1294XF1288XF1291
XCAM487884 XCC-B100_2558XCC-B100_2557XCC-B100_2556XCC-B100_2562XCC-B100_2559
XCAM316273 XCAORF_1937XCAORF_1938XCAORF_1939XCAORF_1933XCAORF_1936
XCAM314565 XC_2530XC_2529XC_2528XC_2534XC_2531
XCAM190485 XCC1701XCC1702XCC1703XCC1697XCC1700
XAXO190486 XAC1720XAC1721XAC1722XAC1716XAC1719
XAUT78245 XAUT_4402XAUT_4402XAUT_4200XAUT_4289
VVUL216895 VV1_1581VV1_1582VV1_1583VV1_1578VV1_1579
VVUL196600 VV2817VV2816VV2814VV2819VV2818
VPAR223926 VP2560VP2559VP2558VP2562VP2561
VFIS312309 VF2074VF2073VF2072VF2076VF2075
VEIS391735 VEIS_2649VEIS_4360VEIS_4361VEIS_2653VEIS_2650
VCHO345073 VC0395_A0055VC0395_A0056VC0395_A0057VC0395_A2026VC0395_A2025
VCHO VC0527VC0528VC0529VC2448VC2447
TTEN273068 TTE2322TTE2320TTE2609TTE1759
TSP1755 TETH514_0839TETH514_0841TETH514_2304TETH514_1310
TPSE340099 TETH39_0346TETH39_0348TETH39_0147TETH39_0735
TDEN292415 TBD_0622TBD_1003TBD_1004TBD_0619TBD_0621
SWOL335541 SWOL_2361SWOL_2360SWOL_2418SWOL_0276
STYP99287 STM2931STM2930STM2929STM2953STM2952
STHE292459 STH3123STH3122STH40STH249
SSP94122 SHEWANA3_1117SHEWANA3_1118SHEWANA3_1119SHEWANA3_1115SHEWANA3_1116
SSP84588 SYNW1849OR2911SYNW1610OR3091SYNW2428OR1041SYNW2348OR0982
SSP64471 GSYN2274GSYN0826GSYN3027GSYN2888
SSP644076 SCH4B_2279SCH4B_2279SCH4B_1759SCH4B_4319
SSP292414 TM1040_1364TM1040_1364TM1040_1973TM1040_0931
SSON300269 SSO_2896SSO_2895SSO_2894SSO_2937SSO_2936
SSED425104 SSED_1291SSED_1292SSED_1293SSED_1289SSED_1290
SPRO399741 SPRO_0825SPRO_0826SPRO_0827SPRO_0794SPRO_0795
SPEA398579 SPEA_1186SPEA_1187SPEA_1188SPEA_1184SPEA_1185
SONE211586 SO_3439SO_3438SO_3437SO_3441SO_3440
SMEL266834 SMC01040SMC01040SMC01025SMC01028
SMED366394 SMED_1087SMED_1087SMED_1069SMED_1072
SLOI323850 SHEW_1206SHEW_1207SHEW_1208SHEW_1204SHEW_1205
SHIGELLA S2964YGBPYGBBPYRGENO
SHAL458817 SHAL_1223SHAL_1224SHAL_1225SHAL_1221SHAL_1222
SGLO343509 SG0525SG0526SG0527SG0512SG0513
SFUM335543 SFUM_1637SFUM_1636SFUM_2075SFUM_0078
SFLE373384 SFV_2750SFV_2751SFV_2752SFV_2675SFV_2676
SFLE198214 AAN44260.1AAN44259.1AAN44258.1AAN44283.1AAN44282.1
SENT454169 SEHA_C3121SEHA_C3120SEHA_C3119SEHA_C3150SEHA_C3149
SENT321314 SCH_2863SCH_2862SCH_2861SCH_2887SCH_2886
SENT295319 SPA2787SPA2786SPA2785SPA2810SPA2809
SENT220341 STY3056STY3055STY3054STY3082STY3081
SENT209261 T2832T2831T2830T2854T2853
SELO269084 SYC0848_DSYC0380_DSYC2140_DSYC0886_C
SDYS300267 SDY_2947SDY_2946SDY_2945SDY_2997SDY_2996
SDEN318161 SDEN_1197SDEN_1198SDEN_1199SDEN_1195SDEN_1196
SDEG203122 SDE_1246SDE_1247SDE_1248SDE_1243SDE_1245
SBOY300268 SBO_2772SBO_2773SBO_2774SBO_2661SBO_2660
SBAL402882 SHEW185_3135SHEW185_3134SHEW185_3133SHEW185_3137SHEW185_3136
SBAL399599 SBAL195_3278SBAL195_3277SBAL195_3276SBAL195_3280SBAL195_3279
SACI56780 SYN_01401SYN_01400SYN_02922SYN_01733
RSPH349101 RSPH17029_1459RSPH17029_1460RSPH17029_2012RSPH17029_1159
RSPH272943 RSP_2835RSP_6071RSP_0368RSP_2491
RSOL267608 RSC1130RSC1643RSC1644RSC1126RSC1129
RRUB269796 RRU_A1674RRU_A1674RRU_A1887RRU_A1885
RPAL316058 RPB_2885RPB_2885RPB_2790RPB_2778
RPAL316057 RPD_2587RPD_2587RPD_2824RPD_2816
RPAL316056 RPC_2575RPC_2575RPC_2473RPC_2483
RPAL316055 RPE_2755RPE_2755RPE_2595RPE_2607
RPAL258594 RPA2590RPA2590RPA2886RPA2874
RMET266264 RMET_1056RMET_1954RMET_1953RMET_1052RMET_1055
RLEG216596 RL2254RL2254RL2511RL2239
RFER338969 RFER_2651RFER_1332RFER_1332RFER_2648RFER_2650
REUT381666 H16_A1189H16_A1456H16_A1457H16_A1185H16_A1188
REUT264198 REUT_A1092REUT_A1361REUT_A1362REUT_A1088REUT_A1091
RETL347834 RHE_CH01945RHE_CH01945RHE_CH02184RHE_CH01931
RDEN375451 RD1_2766RD1_2767RD1_1906RD1_3142
PSYR223283 PSPTO_1555PSPTO_1556PSPTO_1560PSPTO_1552PSPTO_1554
PSYR205918 PSYR_1364PSYR_1365PSYR_1369PSYR_1361PSYR_1363
PSTU379731 PST_1558PST_1559PST_1566PST_1555PST_1557
PSP56811 PSYCPRWF_1663PSYCPRWF_1662PSYCPRWF_0962PSYCPRWF_1670PSYCPRWF_1664
PSP312153 PNUC_0948PNUC_0930PNUC_0931PNUC_0945PNUC_0947
PSP296591 BPRO_3185BPRO_2716BPRO_2715BPRO_3181BPRO_3184
PPUT76869 PPUTGB1_1167PPUTGB1_1168PPUTGB1_1172PPUTGB1_1164PPUTGB1_1166
PPUT351746 PPUT_4164PPUT_4163PPUT_4159PPUT_4167PPUT_1850
PPUT160488 PP_1613PP_1614PP_1618PP_1610PP_1612
PPRO298386 PBPRA3078PBPRA3077PBPRA3076PBPRA3080PBPRA3079
PNAP365044 PNAP_1182PNAP_2549PNAP_2548PNAP_1185PNAP_1183
PMUL272843 PM1607PM1608PM1609PM1872PM1871
PMEN399739 PMEN_3032PMEN_3031PMEN_3026PMEN_3035PMEN_3033
PMAR74547 PMT1330PMT0356PMT2219PMT2083
PMAR167555 NATL1_05091NATL1_17001NATL1_21631NATL1_02841
PMAR167539 PRO_0453PRO_1354PRO_1853PRO_0235
PLUM243265 PLU0712PLU0713PLU0714PLU0912PLU0913
PING357804 PING_0671PING_0672PING_0673PING_0668PING_0669
PHAL326442 PSHAA0683PSHAA0684PSHAA0685PSHAA0741PSHAA0742
PFLU220664 PFL_1197PFL_1198PFL_1202PFL_1194PFL_1196
PFLU216595 PFLU1292PFLU1293PFLU1297PFLU1289PFLU1291
PFLU205922 PFL_1122PFL_1123PFL_1127PFL_1119PFL_1121
PENT384676 PSEEN4199PSEEN4198PSEEN4194PSEEN4202PSEEN4200
PCRY335284 PCRYO_1869PCRYO_1868PCRYO_1149PCRYO_1875PCRYO_1870
PCAR338963 PCAR_0103PCAR_0102PCAR_1945PCAR_1230
PATL342610 PATL_3856PATL_3857PATL_3858PATL_3265PATL_3266
PARC259536 PSYC_1635PSYC_1634PSYC_1243PSYC_1641PSYC_1636
PAER208964 PA3634PA3633PA3627PA3637PA3635
PAER208963 PA14_17330PA14_17340PA14_17420PA14_17290PA14_17320
OCAR504832 OCAR_6093OCAR_6093OCAR_6300OCAR_6292
OANT439375 OANT_2069OANT_2069OANT_2054OANT_2056
NWIN323098 NWI_1442NWI_1442NWI_1833NWI_1827
NOCE323261 NOC_0853NOC_0854NOC_0855NOC_0850NOC_0852
NMUL323848 NMUL_A1229NMUL_A2127NMUL_A2126NMUL_A1227NMUL_A1228
NMEN374833 NMCC_1199NMCC_1418NMCC_1417NMCC_1456NMCC_1198
NMEN272831 NMC1221NMC1442NMC1441NMC1471NMC1220
NMEN122587 NMA1496NMA1713NMA1712NMA1742NMA1495
NMEN122586 NMB_1286NMB_1513NMB_1512NMB_1554NMB_1285
NHAM323097 NHAM_1834NHAM_1834NHAM_1738NHAM_1743
NGON242231 NGO0616NGO0972NGO0971NGO1212NGO0617
NEUT335283 NEUT_2481NEUT_1525NEUT_1300NEUT_2483NEUT_2482
NEUR228410 NE1043NE1412NE1402NE1045NE1044
NARO279238 SARO_1925SARO_1925SARO_2017SARO_2223
MTHE264732 MOTH_2487MOTH_2486MOTH_2409MOTH_0266
MSUC221988 MS2276MS2275MS2274MS0255MS0256
MSP409 M446_5927M446_5927M446_5402M446_5894
MSP400668 MMWYL1_1300MMWYL1_1301MMWYL1_1302MMWYL1_1298MMWYL1_1299
MSP266779 MESO_1621MESO_1621MESO_1634MESO_1632
MPET420662 MPE_A2848MPE_A1570MPE_A1571MPE_B0218MPE_A2847
MMAR394221 MMAR10_1439MMAR10_1439MMAR10_1408MMAR10_1413
MMAG342108 AMB2363AMB2363AMB1821AMB1823
MLOT266835 MLL0395MLL0395MLL0606MLR0378
MFLA265072 MFLA_1908MFLA_1116MFLA_1117MFLA_1911MFLA_1909
MEXT419610 MEXT_2817MEXT_2817MEXT_4661MEXT_2784
MCAP243233 MCA_2516MCA_2517MCA_2518MCA_2513MCA_2515
MAQU351348 MAQU_0922MAQU_0923MAQU_0924MAQU_0919MAQU_0921
LSPH444177 BSPH_4646BSPH_4645BSPH_0979BSPH_0468
LMON265669 LMOF2365_0247LMOF2365_0248LMOF2365_2531LMOF2365_2428
LMON169963 LMO0235LMO0236LMO2559LMO2455
LINT267671 LIC_12617LIC_10610LIC_11540LIC_11954
LINT189518 LA1048LA3590LA2409LA1951
LINN272626 LIN0267LIN0268LIN2704LIN2549
LCHO395495 LCHO_1173LCHO_2295LCHO_2293LCHO_1176LCHO_1174
LBOR355277 LBJ_0280LBJ_0323LBJ_1451LBJ_1561
LBOR355276 LBL_2796LBL_2753LBL_1675LBL_1785
KPNE272620 GKPORF_B2441GKPORF_B2440GKPORF_B2439GKPORF_B2458GKPORF_B2457
JSP375286 MMA_1271MMA_1409MMA_1410MMA_1269MMA_1270
JSP290400 JANN_2235JANN_2235JANN_3181JANN_1797
ILOI283942 IL0753IL0752IL0751IL0773IL0772
HSOM228400 HSM_0506HSM_0505HSM_0503HSM_1668HSM_1613
HSOM205914 HS_1495HS_1496HS_1498HS_0552HS_0561
HNEP81032 HNE_2014HNE_2014HNE_1794HNE_1980
HMOD498761 HM1_1354HM1_1354HM1_1068HM1_1316
HINF71421 HI_0673HI_0672HI_0671HI_1077HI_0932
HINF374930 CGSHIEE_08810CGSHIEE_08815CGSHIEE_08820CGSHIEE_06690CGSHIEE_07310
HINF281310 NTHI0795NTHI0794NTHI0793NTHI1238NTHI1103
HHAL349124 HHAL_1436HHAL_1435HHAL_1434HHAL_1439HHAL_1437
HDUC233412 HD_1330HD_1329HD_1328HD_0373HD_0477
HCHE349521 HCH_01868HCH_01869HCH_01870HCH_01865HCH_01867
HARS204773 HEAR2187HEAR1912HEAR1911HEAR2189HEAR2188
GURA351605 GURA_4163GURA_4164GURA_2979GURA_1780
GTHE420246 GTNG_0081GTNG_0082GTNG_3334GTNG_3003
GSUL243231 GSU_3368GSU_3367GSU_1895GSU_2286
GOXY290633 GOX1669GOX1669GOX2282GOX2279
GMET269799 GMET_0060GMET_0059GMET_1276GMET_2372
GKAU235909 GK0081GK0082GK3389GK3054
GBET391165 GBCGDNIH1_1019GBCGDNIH1_1019GBCGDNIH1_0828GBCGDNIH1_1181
FTUL458234 FTA_1610FTA_1609FTA_0882FTA_1386FTA_1611
FTUL418136 FTW_1531FTW_1530FTW_1161FTW_1708FTW_1532
FTUL401614 FTN_0622FTN_0623FTN_1110FTN_0270FTN_0621
FTUL393115 FTF0710FTF0711FTF1128FTF0374CFTF0709
FTUL393011 FTH_1476FTH_1475FTH_0823FTH_1283FTH_1477
FTUL351581 FTL_1526FTL_1525FTL_0833FTL_1311FTL_1527
FRANT FTSBISPDISPFPYRGENO
FPHI484022 FPHI_0220FPHI_0219FPHI_1496FPHI_0550FPHI_0221
ESP42895 ENT638_3219ENT638_3218ENT638_3217ENT638_3234ENT638_3233
EFER585054 EFER_0320EFER_0321EFER_0322EFER_0284EFER_0285
ECOO157 Z4056YGBPYGBBPYRGENO
ECOL83334 ECS3602ECS3601ECS3600ECS3640ECS3639
ECOL585397 ECED1_3204ECED1_3203ECED1_3202ECED1_3233ECED1_3232
ECOL585057 ECIAI39_2937ECIAI39_2936ECIAI39_2935ECIAI39_3199ECIAI39_3198
ECOL585056 ECUMN_3072ECUMN_3071ECUMN_3070ECUMN_3111ECUMN_3110
ECOL585055 EC55989_3020EC55989_3019EC55989_3018EC55989_3055EC55989_3054
ECOL585035 ECS88_3018ECS88_3017ECS88_3016ECS88_3048ECS88_3047
ECOL585034 ECIAI1_2849ECIAI1_2848ECIAI1_2847ECIAI1_2888ECIAI1_2887
ECOL481805 ECOLC_0964ECOLC_0965ECOLC_0966ECOLC_0932ECOLC_0933
ECOL469008 ECBD_0976ECBD_0977ECBD_0978ECBD_0949ECBD_0950
ECOL439855 ECSMS35_2873ECSMS35_2872ECSMS35_2871ECSMS35_2918ECSMS35_2917
ECOL413997 ECB_02598ECB_02597ECB_02596ECB_02625ECB_02624
ECOL409438 ECSE_3000ECSE_2999ECSE_2998ECSE_3038ECSE_3037
ECOL405955 APECO1_3775APECO1_3776APECO1_3777APECO1_3750APECO1_3751
ECOL364106 UTI89_C3119UTI89_C3118UTI89_C3117UTI89_C3149UTI89_C3148
ECOL362663 ECP_2730ECP_2729ECP_2728ECP_2761ECP_2760
ECOL331111 ECE24377A_3049ECE24377A_3048ECE24377A_3047ECE24377A_3084ECE24377A_3083
ECOL316407 ECK2743:JW2718:B2748ECK2742:JW2717:B2747ECK2741:JW2716:B2746ECK2774:JW2751:B2780ECK2773:JW2750:B2779
ECOL199310 C3315C3314C3313C3345C3344
ECAR218491 ECA3536ECA3535ECA3534ECA3567ECA3566
DVUL882 DVU_1454DVU_1454DVU_1623DVU_0322
DSHI398580 DSHI_1577DSHI_1577DSHI_2744DSHI_2145
DRED349161 DRED_0187DRED_0188DRED_3181DRED_2987
DOLE96561 DOLE_2147DOLE_1666DOLE_0341DOLE_0339
DHAF138119 DSY0443DSY0444DSY4944DSY4838
DDES207559 DDE_1726DDE_1726DDE_1765DDE_0295
DARO159087 DARO_2363DARO_1973DARO_1974DARO_2366DARO_2364
CVIO243365 CV_3460CV_1258CV_1259CV_3457
CSP78 CAUL_2603CAUL_2603CAUL_2765CAUL_2762
CSP501479 CSE45_1378CSE45_1378CSE45_0613CSE45_2022
CSAL290398 CSAL_2639CSAL_2638CSAL_2637CSAL_0617CSAL_0619
CPSY167879 CPS_1071CPS_1072CPS_1073CPS_4108CPS_4106
CPHY357809 CPHY_0353CPHY_3326CPHY_0325CPHY_3001
CPER289380 CPR_2426CPR_2302CPR_2182CPR_1295
CPER195103 CPF_2739CPF_2616CPF_2472CPF_1505
CPER195102 CPE2429CPE2316CPE2208CPE1299
CNOV386415 NT01CX_1092NT01CX_0736NT01CX_0555NT01CX_1414
CKLU431943 CKL_0200CKL_3774CKL_3715CKL_3378
CJAP155077 CJA_2224CJA_2223CJA_2222CJA_2227CJA_2225
CHYD246194 CHY_2342CHY_2341CHY_0125CHY_0284
CDES477974 DAUD_0186DAUD_0186DAUD_2180DAUD_0306
CBOT536232 CLM_3975CLM_0110CLM_0175CLM_0280
CBOT515621 CLJ_B3816CLJ_B0100CLJ_B0170CLJ_B0278
CBOT508765 CLL_A0216CLL_A0353CLL_A0476CLL_A3055
CBOT498213 CLD_0997CLD_0719CLD_0654CLD_0545
CBOT441772 CLI_3691CLI_0123CLI_0187CLI_0295
CBOT441771 CLC_3453CLC_0114CLC_0180CLC_0286
CBOT441770 CLB_3564CLB_0102CLB_0168CLB_0271
CBOT36826 CBO3504CBO0066CBO0132CBO0230
CBLO291272 BPEN_170BPEN_171BPEN_172BPEN_161BPEN_162
CBEI290402 CBEI_0129CBEI_0297CBEI_0398CBEI_0602
CAULO CC1738CC1738CC1720CC1724
CACE272562 CAC3184CAC0434CAC2892CAC0713
BWEI315730 BCERKBAB4_0080BCERKBAB4_0081BCERKBAB4_5136BCERKBAB4_4927
BVIE269482 BCEP1808_2185BCEP1808_1870BCEP1808_1869BCEP1808_2188BCEP1808_2186
BTRI382640 BT_0870BT_0870BT_0854BT_0856
BTHU412694 BALH_0085BALH_0086BALH_4836BALH_4627
BTHU281309 BT9727_0082BT9727_0083BT9727_5022BT9727_4814
BTHA271848 BTH_I1895BTH_I2089BTH_I2090BTH_I1892BTH_I1894
BSUI470137 BSUIS_A1169BSUIS_A1169BSUIS_A1183BSUIS_A1181
BSUI204722 BR_1120BR_1120BR_1134BR_1132
BSUB BSU00900BSU00910BSU37150BSU33900
BSP376 BRADO3869BRADO3869BRADO4103BRADO4094
BSP36773 BCEP18194_A5412BCEP18194_A5254BCEP18194_A5253BCEP18194_A5415BCEP18194_A5413
BSP107806 BU421BU420BU419BU416BU417
BQUI283165 BQ04980BQ04980BQ04860BQ04880
BPUM315750 BPUM_0075BPUM_0076BPUM_3360BPUM_3053
BPSE320373 BURPS668_2576BURPS668_2358BURPS668_2357BURPS668_2579BURPS668_2577
BPSE272560 BPSL2269BPSL2099BPSL2098BPSL2272BPSL2270
BPET94624 BPET1803BPET1695BPET1696BPET1800BPET1802
BPER257313 BP2385BP0865BP0866BP2389BP2386
BPAR257311 BPP3251BPP3366BPP3365BPP3255BPP3252
BOVI236 GBOORF1120GBOORF1120GBOORF1136GBOORF1134
BMEL359391 BAB1_1143BAB1_1143BAB1_1157BAB1_1155
BMEL224914 BMEI0863BMEI0863BMEI0849BMEI0851
BMAL320389 BMA10247_1465BMA10247_1259BMA10247_1258BMA10247_1468BMA10247_1466
BMAL320388 BMASAVP1_A2192BMASAVP1_A1987BMASAVP1_A1986BMASAVP1_A2195BMASAVP1_A2193
BMAL243160 BMA_1688BMA_1490BMA_1489BMA_1691BMA_1689
BLIC279010 BL03265BL03266BL03966BL03468
BJAP224911 BLL4485BLL4485BLL4805BLL4794
BHEN283166 BH05820BH05820BH05700BH05720
BHAL272558 BH0107BH0108BH3792BH3556
BCLA66692 ABC0125ABC0126ABC3886ABC3017
BCIC186490 BCI_0211BCI_0210BCI_0222BCI_0221
BCER572264 BCA_0114BCA_0115BCA_5488BCA_5246
BCER405917 BCE_0085BCE_0086BCE_5468BCE_5238
BCER315749 BCER98_0080BCER98_0081BCER98_3859BCER98_3678
BCER288681 BCE33L0081BCE33L0082BCE33L5038BCE33L4824
BCER226900 BC_0106BC_0107BC_5338BC_5135
BCEN331272 BCEN2424_2106BCEN2424_1943BCEN2424_1942BCEN2424_2109BCEN2424_2107
BCEN331271 BCEN_5971BCEN_6136BCEN_6137BCEN_5968BCEN_5970
BCAN483179 BCAN_A1139BCAN_A1139BCAN_A1153BCAN_A1151
BBRO257310 BB3702BB3817BB3816BB3706BB3703
BBAC360095 BARBAKC583_0540BARBAKC583_0540BARBAKC583_0530BARBAKC583_0532
BAPH198804 BUSG406BUSG405BUSG404BUSG399BUSG400
BANT592021 BAA_0101BAA_0102BAA_5608BAA_5394
BANT568206 BAMEG_0101BAMEG_0102BAMEG_5627BAMEG_5417
BANT261594 GBAA0084GBAA0085GBAA5583GBAA5364
BANT260799 BAS0085BAS0086BAS5187BAS4985
BAMY326423 RBAM_001150RBAM_001160RBAM_034310RBAM_031260
BAMB398577 BAMMC406_2016BAMMC406_1858BAMMC406_1857BAMMC406_2019BAMMC406_2017
BAMB339670 BAMB_2143BAMB_1931BAMB_1930BAMB_2146BAMB_2144
BABO262698 BRUAB1_1126BRUAB1_1126BRUAB1_1140BRUAB1_1138
ASP76114 EBD109EBA6543EBA6542EBA6159EBA6162
ASP62977 ACIAD2000ACIAD1999ACIAD1996ACIAD2003ACIAD2001
ASP62928 AZO2143AZO1682AZO1683AZO2146AZO2144
ASP232721 AJS_0996AJS_3156AJS_3155AJS_1000AJS_0997
ASAL382245 ASA_3474ASA_3473ASA_3472ASA_3476ASA_3475
APLE434271 APJL_0806APJL_0807APJL_0808APJL_0137APJL_1132
APLE416269 APL_0801APL_0802APL_0803APL_0136APL_1113
AMET293826 AMET_4506AMET_4505AMET_0183AMET_3576
AHYD196024 AHA_0822AHA_0823AHA_0824AHA_0820AHA_0821
AFER243159 AFE_2191AFE_2662AFE_2661AFE_2194AFE_2192
AEHR187272 MLG_1838MLG_1837MLG_1836MLG_1841MLG_1839
ADEH290397 ADEH_1272ADEH_1272ADEH_4174ADEH_1642
ACRY349163 ACRY_0551ACRY_2031ACRY_1238ACRY_0167
ACAU438753 AZC_3089AZC_3089AZC_3067AZC_3061
ABOR393595 ABO_1165ABO_1166ABO_1167ABO_1162ABO_1164
ABAU360910 BAV1167BAV1060BAV1059BAV1165BAV1166
ABAC204669 ACID345_0188ACID345_0187ACID345_3670ACID345_1070
AAVE397945 AAVE_1321AAVE_1581AAVE_1582AAVE_1327AAVE_1322
AAEO224324 AQ_1323AQ_957AQ_1334AQ_484


Organism features enriched in list (features available for 283 out of the 303 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001381968112
Endospores:No 1.635e-2247211
Endospores:Yes 0.00002024053
GC_Content_Range4:0-40 7.424e-1559213
GC_Content_Range4:40-60 6.059e-7137224
GC_Content_Range4:60-100 0.000481187145
GC_Content_Range7:0-30 0.00713341547
GC_Content_Range7:30-40 6.376e-1244166
GC_Content_Range7:50-60 4.563e-1182107
GC_Content_Range7:60-70 0.000015386134
GC_Content_Range7:70-100 0.0065677111
Genome_Size_Range5:0-2 2.984e-2720155
Genome_Size_Range5:2-4 0.008802784197
Genome_Size_Range5:4-6 1.524e-29151184
Genome_Size_Range9:0-1 0.0000282327
Genome_Size_Range9:1-2 3.813e-2117128
Genome_Size_Range9:2-3 0.000070040120
Genome_Size_Range9:4-5 8.953e-147996
Genome_Size_Range9:5-6 2.961e-127288
Genome_Size_Range9:6-8 0.00540912638
Gram_Stain:Gram_Neg 2.329e-20216333
Gram_Stain:Gram_Pos 6.268e-943150
Habitat:Host-associated 0.000023777206
Habitat:Multiple 8.595e-6110178
Habitat:Specialized 0.00011421353
Habitat:Terrestrial 0.00191462331
Motility:No 1.113e-1335151
Motility:Yes 3.469e-16178267
Optimal_temp.:- 0.0039578139257
Optimal_temp.:25-30 7.882e-71919
Optimal_temp.:30-37 0.0039613318
Optimal_temp.:35-37 0.00007191313
Optimal_temp.:37 0.006888141106
Oxygen_Req:Anaerobic 0.000561735102
Oxygen_Req:Facultative 0.0029532112201
Shape:Coccus 4.027e-91682
Shape:Rod 1.181e-24228347
Shape:Sphere 0.0004232219
Shape:Spiral 0.0013935834
Temp._range:Hyperthermophilic 0.0002759323
Temp._range:Mesophilic 0.0004004245473
Temp._range:Thermophilic 0.0002548735



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 163
Effective number of orgs (counting one per cluster within 468 clusters): 136

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4111
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B311
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  G7424   G7423   EG11816   EG10810   EG10258   
WPIP80849 WB_0617
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_1436
TPET390874 TPET_1390
TPEN368408
TPAL243276 TP_0512
TMAR243274 TM_1393
TLET416591
TKOD69014
TDEN326298 TMDEN_1487
TACI273075
STOK273063
STHE322159 STER_0684
STHE299768 STR0635
STHE264199 STU0635
SSUI391296 SSU98_1513
SSUI391295
SSP387093 SUN_0522
SSOL273057
SPYO293653
SPYO286636 M6_SPY1618
SMAR399550
SAGA211110 GBS0608
SAGA208435 SAG_0628
SAGA205921 SAK_0713
SACI330779
RTYP257363
RSP357808 ROSERS_3115
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_2963
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PPEN278197 PEPE_0462
PMOB403833 PMOB_1218
PISL384616
PHOR70601
PFUR186497
PAST100379 PAM284
PARS340102
PAER178306
PABY272844
OTSU357244
NPHA348780
NFAR247156 NFA4360
MXAN246197 MXAN_1096
MVAN350058 MVAN_4129
MTUB419947 MRA_3621
MTUB336982 TBFG_13615
MTHE349307
MTHE187420
MTBRV RV3582C
MTBCDC MT3688
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158 MMARC6_1762
MMAR426368 MMARC7_0141
MMAR402880 MMARC5_0701
MMAR368407
MMAR267377 MMP0893
MLAB410358
MKAN190192 MK0205
MJAN243232 MJ_1174
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_2529
MGEN243273
MFLO265311
MCAP340047 MCAP_0213
MBUR259564
MBOV410289 BCG_3647C
MBOV233413 MB3613C
MBAR269797
MART243272
MAEO419665
MACE188937
MABS561007 MAB_0569
LREU557436 LREU_0230
LPLA220668 LP_0792
LMES203120 LEUM_0240
LLAC272623 L0007
LLAC272622 LACR_0668
LJOH257314 LJ_0875
LHEL405566
LGAS324831 LGAS_1305
LDEL390333
LDEL321956
LBRE387344 LVIS_0664
LACI272621
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0404
HPYL357544 HPAG1_0427
HPY HP1020
HMUK485914
HMAR272569
HHEP235279 HH_1582
HBUT415426
HAUR316274 HAUR_1743
HACI382638 HAC_1124
FNOD381764 FNOD_0183
FJOH376686 FJOH_0368
ERUM302409 ERGA_CDS_00950
ERUM254945 ERWE_CDS_00990
CTRA471473 CTLON_0718
CTRA471472 CTL0722
CSUL444179
CPRO264201 PC0327
CPNE182082 CPB0603
CPNE138677 CPJ0579
CPNE115713 CPN0579
CPNE115711 CP_0169
CMUR243161 TC_0747
CMET456442
CMAQ397948
CKOR374847
CJEI306537 JK0871
CGLU196627 CG2945
CFEL264202 CF0845
CDIP257309 DIP1973
CCAV227941 CCA_00162
CABO218497 CAB160
BXEN266265
BTUR314724
BLON206672 BL0324
BHER314723
BGAR290434
BBUR224326 BB_0337
BBAC264462 BD0808
BAPH372461 BCC_264
BAFZ390236
AYEL322098 AYWB_437
AURANTIMONAS
APHA212042 APH_1276
APER272557
ANAE240017 ANA_1973
ALAI441768 ACL_0402
AFUL224325
ABUT367737 ABU_0126


Organism features enriched in list (features available for 156 out of the 163 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000623717112
Disease:Pharyngitis 0.000023088
Disease:bronchitis_and_pneumonitis 0.000023088
Endospores:No 4.099e-1394211
Endospores:Yes 6.335e-6253
GC_Content_Range4:0-40 3.022e-783213
GC_Content_Range4:60-100 0.000182623145
GC_Content_Range7:0-30 0.00001062647
GC_Content_Range7:30-40 0.002947157166
GC_Content_Range7:50-60 0.000284715107
GC_Content_Range7:60-70 0.000616222134
Genome_Size_Range5:0-2 8.624e-2794155
Genome_Size_Range5:2-4 0.008260042197
Genome_Size_Range5:4-6 2.192e-1414184
Genome_Size_Range5:6-10 0.0094274647
Genome_Size_Range9:0-1 1.882e-82127
Genome_Size_Range9:1-2 5.626e-1773128
Genome_Size_Range9:3-4 0.0000337777
Genome_Size_Range9:4-5 3.977e-6996
Genome_Size_Range9:5-6 5.954e-8588
Genome_Size_Range9:6-8 0.0081682438
Gram_Stain:Gram_Neg 4.307e-763333
Habitat:Host-associated 0.000679071206
Habitat:Multiple 7.525e-627178
Habitat:Specialized 0.00004982753
Habitat:Terrestrial 0.0033709231
Motility:No 0.004222752151
Motility:Yes 0.000336854267
Optimal_temp.:- 0.000014447257
Optimal_temp.:37 0.000018546106
Optimal_temp.:85 0.004982844
Oxygen_Req:Anaerobic 0.000440241102
Pathogenic_in:Swine 0.001308155
Shape:Irregular_coccus 1.187e-71517
Shape:Rod 2.563e-864347
Shape:Sphere 1.584e-71619
Temp._range:Hyperthermophilic 1.064e-92023
Temp._range:Mesophilic 0.0002989112473
Temp._range:Thermophilic 0.00643101635



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462120.6068
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951770.5690
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002310.5469
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181870.5452
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491430.5310
PWY-1269 (CMP-KDO biosynthesis I)3252390.5203
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862180.5085
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222790.5067
PWY-4041 (γ-glutamyl cycle)2792140.5057
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251850.5053
PWY-5918 (heme biosynthesis I)2722100.5032
TYRFUMCAT-PWY (tyrosine degradation I)1841600.4964
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162750.4955
PWY-5386 (methylglyoxal degradation I)3052250.4925
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912180.4922
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392410.4909
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482450.4899
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962190.4826
PWY-5340 (sulfate activation for sulfonation)3852590.4743
PWY-5194 (siroheme biosynthesis)3122250.4705
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652490.4660
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831550.4653
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902130.4633
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112230.4608
PWY-5913 (TCA cycle variation IV)3012180.4602
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982620.4575
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081680.4552
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551930.4505
PWY-5028 (histidine degradation II)1301200.4487
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582840.4458
PWY0-862 (cis-dodecenoyl biosynthesis)3432350.4402
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911560.4395
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292280.4374
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002120.4248
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491850.4189
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491850.4189
GLUTAMINDEG-PWY (glutamine degradation I)1911530.4186
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911530.4186
PROSYN-PWY (proline biosynthesis I)4752860.4149
PWY-5938 ((R)-acetoin biosynthesis I)3762460.4145
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262230.4144
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5052960.4130
ARO-PWY (chorismate biosynthesis I)5102970.4080
PANTO-PWY (pantothenate biosynthesis I)4722840.4080
PWY-6317 (galactose degradation I (Leloir pathway))4642810.4076
NONMEVIPP-PWY (methylerythritol phosphate pathway)4842880.4058
PWY-5148 (acyl-CoA hydrolysis)2271710.4044
AST-PWY (arginine degradation II (AST pathway))1201080.4042
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96920.4030
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761420.4023
GALACTARDEG-PWY (D-galactarate degradation I)1511270.4014



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7423   EG11816   EG10810   EG10258   
G74240.9997230.9996080.9996920.99979
G74230.9999890.9994180.999504
EG118160.9993450.999377
EG108100.999855
EG10258



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PAIRWISE BLAST SCORES:

  G7424   G7423   EG11816   EG10810   EG10258   
G74240.0f0----
G7423-0.0f0---
EG11816--0.0f0--
EG10810---0.0f0-
EG10258----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- NONMEVIPP-PWY (methylerythritol phosphate pathway) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.400, average score: 0.646)
  Genes in pathway or complex:
             0.0310 0.0019 G6237 (dxs) DXS-MONOMER (Dxs)
             0.9869 0.9816 EG12715 (dxr) DXPREDISOM-MONOMER (Dxr)
             0.5414 0.2804 EG10370 (ispG) EG10370-MONOMER (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
             0.2915 0.0688 EG11081 (ispH) EG11081-MONOMER (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase)
   *in cand* 0.9997 0.9994 G7423 (ispD) G7423-MONOMER (4-diphosphocytidyl-2C-methyl-D-erythritol synthetase monomer)
             0.5924 0.0592 EG11294 (ispE) EG11294-MONOMER (IspE)
   *in cand* 0.9997 0.9993 EG11816 (ispF) EG11816-MONOMER (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase monomer)
             0.8882 0.8331 G7508 (idi) IPPISOM-MONOMER (isopentenyl diphosphate isomerase)
             0.9790 0.9597 EG11328 (fdx) OX-FERREDOXIN (oxidized ferredoxin)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9994 EG10258 (eno) ENOLASE-MONOMER (Eno)
   *in cand* 0.9997 0.9993 EG10810 (pyrG) CTPSYN-MONOMER (PyrG)
   *in cand* 0.9998 0.9996 G7424 (ftsB) G7424-MONOMER (essential cell division protein FtsB)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11816 G7423 G7424 (centered at G7423)
EG10258 EG10810 (centered at EG10810)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7424   G7423   EG11816   EG10810   EG10258   
188/623418/623415/623416/623408/623
AAEO224324:0:Tyes-5823255920
AAUR290340:2:Tyes--0740359
AAVE397945:0:Tyes025825961
ABAC204669:0:Tyes-103510893
ABAU360910:0:Tyes10710105106
ABOR393595:0:Tyes34502
ABUT367737:0:Tyes--0--
ACAU438753:0:Tyes-282860
ACEL351607:0:Tyes-144801158-
ACRY349163:8:Tyes-384187110690
ADEH290397:0:Tyes-002931377
AEHR187272:0:Tyes21053
AFER243159:0:Tyes046546431
AHYD196024:0:Tyes23401
ALAI441768:0:Tyes----0
AMAR234826:0:Tyes-10--
AMAR329726:9:Tyes-106320-
AMET293826:0:Tyes-4274427303315
ANAE240017:0:Tyes--0--
AORE350688:0:Tyes-01-503
APHA212042:0:Tyes--0--
APLE416269:0:Tyes6656666670977
APLE434271:0:Tno6386396400964
ASAL382245:5:Tyes21043
ASP1667:3:Tyes--0803423
ASP232721:2:Tyes02080207931
ASP62928:0:Tyes46801471469
ASP62977:0:Tyes43075
ASP76114:2:Tyes322222102
AVAR240292:3:Tyes-6030456-
AYEL322098:4:Tyes----0
BABO262698:1:Tno-001311
BAMB339670:3:Tno22110224222
BAMB398577:3:Tno16610169167
BAMY326423:0:Tyes-0133103006
BANT260799:0:Tno-0151624959
BANT261594:2:Tno-0150794876
BANT568206:2:Tyes-0153425135
BANT592021:2:Tno-0153315120
BAPH198804:0:Tyes65401
BAPH372461:0:Tyes----0
BBAC264462:0:Tyes---0-
BBAC360095:0:Tyes-101002
BBRO257310:0:Tyes011511441
BBUR224326:21:Fno----0
BCAN483179:1:Tno-001412
BCEN331271:0:Tno317517602
BCEN331272:3:Tyes16410167165
BCER226900:1:Tyes-0151244926
BCER288681:0:Tno-0150254812
BCER315749:1:Tyes-0135913420
BCER405917:1:Tyes-0151094892
BCER572264:1:Tno-0151824943
BCIC186490:0:Tyes-101211
BCLA66692:0:Tyes-0138062942
BFRA272559:1:Tyes-25422592-0
BFRA295405:0:Tno-28092858-0
BHAL272558:0:Tyes-0137573521
BHEN283166:0:Tyes-121202
BJAP224911:0:Fyes-00322311
BLIC279010:0:Tyes-0137313438
BLON206672:0:Tyes-0---
BMAL243160:1:Tno17110174172
BMAL320388:1:Tno19810201199
BMAL320389:1:Tyes20110204202
BMEL224914:1:Tno-141402
BMEL359391:1:Tno-001311
BOVI236:1:Tyes-001412
BPAR257311:0:Tno011311241
BPER257313:0:Tyes13680113721369
BPET94624:0:Tyes10801105107
BPSE272560:1:Tyes17410177175
BPSE320372:1:Tno0--31
BPSE320373:1:Tno20810211209
BPUM315750:0:Tyes-0133183012
BQUI283165:0:Tyes-121202
BSP107806:2:Tyes54301
BSP36773:2:Tyes16710170168
BSP376:0:Tyes-00225216
BSUB:0:Tyes-0138333506
BSUI204722:1:Tyes-001412
BSUI470137:1:Tno-001412
BTHA271848:1:Tno319119202
BTHE226186:0:Tyes-390-694
BTHU281309:1:Tno-0148934685
BTHU412694:1:Tno-0146004399
BTRI382640:1:Tyes-141402
BVIE269482:7:Tyes31510318316
BWEI315730:4:Tyes-0150514843
CABO218497:0:Tyes-0---
CACE272562:1:Tyes-275102462278
CAULO:0:Tyes-181804
CBEI290402:0:Tyes-0166267470
CBLO203907:0:Tyes9--01
CBLO291272:0:Tno9101101
CBOT36826:1:Tno-3401065160
CBOT441770:0:Tyes-3361066162
CBOT441771:0:Tno-3226067163
CBOT441772:1:Tno-3436064162
CBOT498213:1:Tno-3455065167
CBOT508765:1:Tyes-01362362781
CBOT515621:2:Tyes-3606070169
CBOT536232:0:Tno-3706065161
CBUR227377:1:Tyes0--9-
CBUR360115:1:Tno0--8-
CBUR434922:2:Tno8--0-
CCAV227941:1:Tyes-0---
CCHL340177:0:Tyes-0861--
CCON360104:2:Tyes--01299-
CCUR360105:0:Tyes--0621-
CDES477974:0:Tyes-001959121
CDIF272563:1:Tyes-01-3180
CDIP257309:0:Tyes-0---
CEFF196164:0:Fyes-1521--0
CFEL264202:1:Tyes-0---
CFET360106:0:Tyes--01304-
CGLU196627:0:Tyes-0---
CHOM360107:1:Tyes--7790-
CHUT269798:0:Tyes-081-33
CHYD246194:0:Tyes-215421530159
CJAP155077:0:Tyes21053
CJEI306537:0:Tyes---0-
CJEJ192222:0:Tyes--15250-
CJEJ195099:0:Tno--16970-
CJEJ354242:2:Tyes--14860-
CJEJ360109:0:Tyes--18090-
CJEJ407148:0:Tno--15190-
CKLU431943:1:Tyes-0352634673148
CMIC31964:2:Tyes-141714170-
CMIC443906:2:Tyes-5165160-
CMUR243161:1:Tyes-0---
CNOV386415:0:Tyes-020261845320
CPEL335992:0:Tyes--80-
CPER195102:1:Tyes-118510629250
CPER195103:0:Tno-117010589380
CPER289380:3:Tyes-10749618650
CPHY357809:0:Tyes-28297302652
CPNE115711:1:Tyes-0---
CPNE115713:0:Tno-0---
CPNE138677:0:Tno-0---
CPNE182082:0:Tno-0---
CPRO264201:0:Fyes-0---
CPSY167879:0:Tyes01229492947
CRUT413404:0:Tyes-368-3020
CSAL290398:0:Tyes20622061206002
CSP501479:8:Fyes-75575501387
CSP78:2:Tyes-00163160
CTEP194439:0:Tyes-0281--
CTET212717:0:Tyes-21960-139
CTRA471472:0:Tyes-0---
CTRA471473:0:Tno-0---
CVES412965:0:Tyes-352-2770
CVIO243365:0:Tyes2254012251-
DARO159087:0:Tyes38601389387
DDES207559:0:Tyes-1449144914900
DETH243164:0:Tyes-01-523
DGEO319795:1:Tyes-176--0
DHAF138119:0:Tyes-0145444438
DNOD246195:0:Tyes---02
DOLE96561:0:Tyes-1827134020
DPSY177439:2:Tyes-00531-
DRAD243230:3:Tyes-23300-2360
DRED349161:0:Tyes-0130202827
DSHI398580:5:Tyes-001183581
DSP216389:0:Tyes-01-515
DSP255470:0:Tno-01-429
DVUL882:1:Tyes-1127112712960
ECAN269484:0:Tyes-10--
ECAR218491:0:Tyes2103332
ECHA205920:0:Tyes-10--
ECOL199310:0:Tno2103130
ECOL316407:0:Tno2103332
ECOL331111:6:Tno2103534
ECOL362663:0:Tno2103332
ECOL364106:1:Tno2103231
ECOL405955:2:Tyes2102827
ECOL409438:6:Tyes2104039
ECOL413997:0:Tno2102928
ECOL439855:4:Tno2104746
ECOL469008:0:Tno27282901
ECOL481805:0:Tno32333401
ECOL585034:0:Tno2103837
ECOL585035:0:Tno2102928
ECOL585055:0:Tno2103534
ECOL585056:2:Tno2103837
ECOL585057:0:Tno210279278
ECOL585397:0:Tno2103029
ECOL83334:0:Tno2104039
ECOLI:0:Tno2103433
ECOO157:0:Tno2104039
EFAE226185:3:Tyes--0-1796
EFER585054:1:Tyes31323301
ELIT314225:0:Tyes--1121470
ERUM254945:0:Tyes--0--
ERUM302409:0:Tno--0--
ESP42895:1:Tyes2101716
FALN326424:0:Tyes-10--
FJOH376686:0:Tyes----0
FMAG334413:1:Tyes-447446-0
FNOD381764:0:Tyes-0---
FNUC190304:0:Tyes-0208-184
FPHI484022:1:Tyes1013303432
FRANT:0:Tno3083096940307
FSP106370:0:Tyes-10--
FSP1855:0:Tyes-01--
FSUC59374:0:Tyes-019281597-
FTUL351581:0:Tno6146130423615
FTUL393011:0:Tno5305290379531
FTUL393115:0:Tyes3053066890304
FTUL401614:0:Tyes3483498320347
FTUL418136:0:Tno2812800431282
FTUL458234:0:Tno5445430376545
GBET391165:0:Tyes-1911910353
GFOR411154:0:Tyes---0591
GKAU235909:1:Tyes-0133983062
GMET269799:1:Tyes-1012152324
GOXY290633:5:Tyes-00613610
GSUL243231:0:Tyes-146714660391
GTHE420246:1:Tyes-0132052880
GURA351605:0:Tyes-2369237012020
GVIO251221:0:Tyes-128120480-
HACI382638:1:Tyes--0--
HARS204773:0:Tyes25510257256
HAUR316274:2:Tyes---0-
HCHE349521:0:Tyes67802
HDUC233412:0:Tyes832831830093
HHAL349124:0:Tyes21053
HHEP235279:0:Tyes--0--
HINF281310:0:Tyes210394280
HINF374930:0:Tyes3803813820108
HINF71421:0:Tno210397259
HMOD498761:0:Tyes-6936932450
HNEP81032:0:Tyes-2152150182
HPY:0:Tno--0--
HPYL357544:1:Tyes--0--
HPYL85963:0:Tno--0--
HSOM205914:1:Tyes94294394509
HSOM228400:0:Tno32011801125
ILOI283942:0:Tyes2102221
JSP290400:1:Tyes-44344314060
JSP375286:0:Tyes214514601
KPNE272620:2:Tyes2101918
KRAD266940:2:Fyes-10--
LBIF355278:2:Tyes--012661323
LBIF456481:2:Tno--013081367
LBOR355276:1:Tyes-10209790105
LBOR355277:1:Tno-03810251132
LBRE387344:2:Tyes----0
LCAS321967:1:Tyes-122--0
LCHO395495:0:Tyes01138113631
LGAS324831:0:Tyes----0
LINN272626:1:Tno-0124812326
LINT189518:1:Tyes-025651373910
LINT267671:1:Tno-197009171322
LINT363253:3:Tyes--3533580
LJOH257314:0:Tyes----0
LLAC272622:5:Tyes----0
LLAC272623:0:Tyes----0
LMES203120:1:Tyes----0
LMON169963:0:Tno-0123772272
LMON265669:0:Tyes-0122632161
LPLA220668:0:Tyes----0
LPNE272624:0:Tno855--0-
LPNE297245:1:Fno827--0-
LPNE297246:1:Fyes843--0-
LPNE400673:0:Tno860--0-
LREU557436:0:Tyes---0-
LSAK314315:0:Tyes---10350
LSPH444177:1:Tyes-406540645260
LWEL386043:0:Tyes-0-23102204
LXYL281090:0:Tyes-00--
MABS561007:1:Tyes-0---
MAER449447:0:Tyes-316217600-
MAQU351348:2:Tyes34502
MAVI243243:0:Tyes-01--
MBOV233413:0:Tno-0---
MBOV410289:0:Tno-0---
MCAP243233:0:Tyes34502
MCAP340047:0:Tyes----0
MEXT419610:0:Tyes-323218690
MFLA265072:0:Tyes79101794792
MGIL350054:3:Tyes-0---
MJAN243232:2:Tyes---0-
MKAN190192:0:Tyes---0-
MLEP272631:0:Tyes-01--
MLOT266835:2:Tyes-14141950
MMAG342108:0:Tyes-54254202
MMAR267377:0:Tyes---0-
MMAR394221:0:Tyes-313105
MMAR402880:1:Tyes---0-
MMAR426368:0:Tyes---0-
MMAR444158:0:Tyes---0-
MPET420662:0:Tyes---0-
MPET420662:1:Tyes127201-1271
MSME246196:0:Tyes-10--
MSP164756:1:Tno-10--
MSP164757:0:Tno-10--
MSP189918:2:Tyes-10--
MSP266779:3:Tyes-001311
MSP400668:0:Tyes23401
MSP409:2:Tyes-4944940465
MSUC221988:0:Tyes20862085208401
MTBCDC:0:Tno-0---
MTBRV:0:Tno-0---
MTHE264732:0:Tyes-2168216720900
MTUB336982:0:Tno-0---
MTUB419947:0:Tyes-0---
MVAN350058:0:Tyes-0---
MXAN246197:0:Tyes---0-
NARO279238:0:Tyes-0098306
NEUR228410:0:Tyes037636621
NEUT335283:2:Tyes1155220011571156
NFAR247156:2:Tyes-0---
NGON242231:0:Tyes03143135271
NHAM323097:2:Tyes-979705
NMEN122586:0:Tno12172162570
NMEN122587:0:Tyes12132122430
NMEN272831:0:Tno11831822100
NMEN374833:0:Tno12172162540
NMUL323848:3:Tyes289088901
NOCE323261:1:Tyes34502
NSEN222891:0:Tyes-390--
NSP103690:6:Tyes-130201134-
NSP35761:1:Tyes-155415400-
NSP387092:0:Tyes--4600-
NWIN323098:0:Tyes-00400394
OANT439375:5:Tyes-151502
OCAR504832:0:Tyes-00207199
OIHE221109:0:Tyes---5740
PACN267747:0:Tyes-011055-
PAER208963:0:Tyes341002
PAER208964:0:Tno760108
PARC259536:0:Tyes4014000407402
PAST100379:0:Tyes----0
PATL342610:0:Tyes58858959001
PCAR338963:0:Tyes-1018641136
PCRY335284:1:Tyes7167150722717
PDIS435591:0:Tyes--223-0
PENT384676:0:Tyes54086
PFLU205922:0:Tyes34802
PFLU216595:1:Tyes34802
PFLU220664:0:Tyes34802
PGIN242619:0:Tyes-12280-1569
PHAL326442:1:Tyes0125758
PING357804:0:Tyes34501
PINT246198:1:Tyes-310-1746
PLUM243265:0:Fyes012200201
PLUT319225:0:Tyes-0278--
PMAR146891:0:Tyes-09661386-
PMAR167539:0:Tyes-231114416580
PMAR167540:0:Tyes-08401262-
PMAR167542:0:Tyes-0944--
PMAR167546:0:Tyes-0990--
PMAR167555:0:Tyes-235143519120
PMAR59920:0:Tno-9620457-
PMAR74546:0:Tyes-09351358-
PMAR74547:0:Tyes-981018941757
PMAR93060:0:Tyes-09811451-
PMEN399739:0:Tyes65097
PMOB403833:0:Tyes-0---
PMUL272843:1:Tyes012265264
PNAP365044:8:Tyes01372137131
PPEN278197:0:Tyes----0
PPRO298386:2:Tyes21043
PPUT160488:0:Tno34802
PPUT351746:0:Tyes23232322231823260
PPUT76869:0:Tno34802
PRUM264731:0:Tyes-8271556-0
PSP117:0:Tyes-323004835-
PSP296591:2:Tyes47410470473
PSP312153:0:Tyes20011719
PSP56811:2:Tyes7067050713707
PSTU379731:0:Tyes341102
PSYR205918:0:Tyes34802
PSYR223283:2:Tyes34802
PTHE370438:0:Tyes-012596-
RALB246199:0:Tyes-0430--
RCAS383372:0:Tyes---0-
RDEN375451:4:Tyes-79479501151
RETL347834:5:Tyes-14142500
REUT264198:3:Tyes427127203
REUT381666:2:Tyes426526603
RFER338969:1:Tyes13190013161318
RLEG216596:6:Tyes-15152640
RMET266264:2:Tyes489589403
RPAL258594:0:Tyes-00297285
RPAL316055:0:Tyes-159159012
RPAL316056:0:Tyes-104104010
RPAL316057:0:Tyes-00238230
RPAL316058:0:Tyes-108108120
RPOM246200:1:Tyes--76501137
RRUB269796:1:Tyes-00213211
RSAL288705:0:Tyes-7778-0
RSOL267608:1:Tyes453853903
RSP101510:3:Fyes-01--
RSP357808:0:Tyes---0-
RSPH272943:4:Tyes-3223239040
RSPH349101:2:Tno-3023038610
RSPH349102:5:Tyes-547546-0
RXYL266117:0:Tyes-10--
SACI56780:0:Tyes-132513231660
SAGA205921:0:Tno----0
SAGA208435:0:Tno----0
SAGA211110:0:Tyes----0
SALA317655:1:Tyes--7576500
SARE391037:0:Tyes-10--
SAUR158878:1:Tno---13970
SAUR158879:1:Tno---12960
SAUR196620:0:Tno---13610
SAUR273036:0:Tno---12850
SAUR282458:0:Tno---13820
SAUR282459:0:Tno---13350
SAUR359786:1:Tno---13900
SAUR359787:1:Tno---13570
SAUR367830:3:Tno---12650
SAUR418127:0:Tyes---13870
SAUR426430:0:Tno---13310
SAUR93061:0:Fno---15310
SAUR93062:1:Tno---12490
SAVE227882:1:Fyes-440--0
SBAL399599:3:Tyes21043
SBAL402882:1:Tno21043
SBOY300268:1:Tyes10410510610
SCO:2:Fyes-1159--0
SDEG203122:0:Tyes34502
SDEN318161:0:Tyes23401
SDYS300267:1:Tyes2104948
SELO269084:0:Tyes-47601807515
SENT209261:0:Tno2102423
SENT220341:0:Tno2102423
SENT295319:0:Tno2102120
SENT321314:2:Tno2102625
SENT454169:2:Tno2103130
SEPI176279:1:Tyes---12610
SEPI176280:0:Tno---12110
SERY405948:0:Tyes-01--
SFLE198214:0:Tyes2102524
SFLE373384:0:Tno73747501
SFUM335543:0:Tyes-1543154219770
SGLO343509:3:Tyes13141501
SGOR29390:0:Tyes-565-3150
SHAE279808:0:Tyes---01242
SHAL458817:0:Tyes23401
SHIGELLA:0:Tno2102423
SLAC55218:1:Fyes-6464-0
SLOI323850:0:Tyes23401
SMED366394:3:Tyes-161603
SMEL266834:2:Tyes-161603
SMUT210007:0:Tyes---01074
SONE211586:1:Tyes21043
SPEA398579:0:Tno23401
SPNE1313:0:Tyes---0572
SPNE170187:0:Tyes---160
SPNE171101:0:Tno---0603
SPNE487213:0:Tno---0590
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