CANDIDATE ID: 266

CANDIDATE ID: 266

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9978533e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7706 (gspG) (b3328)
   Products of gene:
     - G7706-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7705 (gspF) (b3327)
   Products of gene:
     - G7705-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7704 (gspE) (b3326)
   Products of gene:
     - G7704-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7703 (gspD) (b3325)
   Products of gene:
     - G7703-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 210
Effective number of orgs (counting one per cluster within 468 clusters): 154

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTHE300852 ncbi Thermus thermophilus HB83
TTHE262724 ncbi Thermus thermophilus HB274
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB43
TSP1755 Thermoanaerobacter sp.3
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332233
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SSP94122 ncbi Shewanella sp. ANA-34
SSP387093 ncbi Sulfurovum sp. NBC37-13
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SELO269084 ncbi Synechococcus elongatus PCC 63014
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2273
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB4
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RPAL316056 ncbi Rhodopseudomonas palustris BisB184
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RMET266264 ncbi Ralstonia metallidurans CH344
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP296591 ncbi Polaromonas sp. JS6664
PSP117 Pirellula sp.4
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO13
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23803
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
NSP35761 Nocardioides sp.3
NSP103690 ncbi Nostoc sp. PCC 71203
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN122587 ncbi Neisseria meningitidis Z24913
NHAM323097 ncbi Nitrobacter hamburgensis X144
NGON242231 ncbi Neisseria gonorrhoeae FA 10903
NEUT335283 ncbi Nitrosomonas eutropha C913
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16224
MTHE264732 ncbi Moorella thermoacetica ATCC 390733
MSP409 Methylobacterium sp.3
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MLOT266835 ncbi Mesorhizobium loti MAFF3030994
MFLA265072 ncbi Methylobacillus flagellatus KT4
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
MAER449447 ncbi Microcystis aeruginosa NIES-8433
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1304
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
LCHO395495 ncbi Leptothrix cholodnii SP-64
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1974
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5504
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)4
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)4
KRAD266940 ncbi Kineococcus radiotolerans SRS302163
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille3
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice13
HHAL349124 ncbi Halorhodospira halophila SL14
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf44
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GMET269799 ncbi Geobacter metallireducens GS-154
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-003
FTUL418136 ncbi Francisella tularensis tularensis WY96-34183
FTUL401614 ncbi Francisella novicida U1123
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2003
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S853
FRANT ncbi Francisella tularensis tularensis SCHU S43
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DRED349161 ncbi Desulfotomaculum reducens MI-13
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DGEO319795 ncbi Deinococcus geothermalis DSM 113003
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSP78 Caulobacter sp.4
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE253
CPER195103 ncbi Clostridium perfringens ATCC 131243
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29013
CDIF272563 ncbi Clostridium difficile 6303
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C3
CAULO ncbi Caulobacter crescentus CB154
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSP376 Bradyrhizobium sp.4
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1004
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
AMET293826 ncbi Alkaliphilus metalliredigens QYMF3
AMAR329726 ncbi Acaryochloris marina MBIC110173
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-54
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  G7706   G7705   G7704   G7703   
YPSE349747 YPSIP31758_0956YPSIP31758_0955YPSIP31758_0954YPSIP31758_0953
YPSE273123 YPTB3062YPTB3063YPTB3064YPTB3065
YPES386656 YPDSF_0697YPDSF_0696YPDSF_0695YPDSF_0694
YPES377628 YPN_3017YPN_3018YPN_3019YPN_3020
YPES360102 YPA_0456YPA_0455YPA_0454YPA_0453
YPES349746 YPANGOLA_A3266YPANGOLA_A3267YPANGOLA_A3268YPANGOLA_A3269
YPES214092 YPO0813YPO3427YPO0815YPO0816
YPES187410 Y3201Y3202Y3203Y3204
YENT393305 YE3568YE3567YE3566YE3349
XORY360094 XOOORF_4562XOOORF_4563XOOORF_4564XOOORF_4554
XORY342109 XOO0773XOO0772XOO0771XOO0781
XORY291331 XOO0849XOO0848XOO0847XOO0857
XFAS405440 XFASM12_0858XFASM12_2108XFASM12_0856XFASM12_0866
XFAS183190 PD_0734PD_1923PD_0732PD_0742
XFAS160492 XF1519XF2538XF1517XF1527
XCAM487884 XCC-B100_0775XCC-B100_0774XCC-B100_0773XCC-B100_0772
XCAM316273 XCAORF_3762XCAORF_3763XCAORF_3764XCAORF_3765
XCAM314565 XC_0742XC_0741XC_0740XC_0739
XCAM190485 XCC3422XCC3423XCC3424XCC3425
XAXO190486 XAC0698XAC0697XAC0696XAC0695
XAUT78245 XAUT_2109XAUT_2108XAUT_2107XAUT_2106
VVUL216895 VV1_0874VV1_0875VV1_0876VV1_0877
VVUL196600 VV0217VV0216VV0215VV0214
VPAR223926 VP0136VP0135VP0134VP0133
VFIS312309 VF2471VF2472VF2473VF2474
VEIS391735 VEIS_3521VEIS_1631VEIS_0688VEIS_3529
VCHO345073 VC0395_A2303VC0395_A2304VC0395_A2305VC0395_A2306
VCHO VC2730VC2731VC2732VC2630
TTUR377629 TERTU_0268TERTU_0267TERTU_0266TERTU_0265
TTHE300852 TTHA0794TTHA0364TTHA1383
TTHE262724 TT_C0858TT_C0440TT_C1622TT_C1017
TTEN273068 TTE1265TTE1264TTE1262
TSP1755 TETH514_1507TETH514_1506TETH514_1504
TPSE340099 TETH39_1070TETH39_1069TETH39_1067
TDEN292415 TBD_1293TBD_0753TBD_0752TBD_0206
TCRU317025 TCR_0253TCR_0252TCR_0251TCR_0250
SSP94122 SHEWANA3_0154SHEWANA3_0153SHEWANA3_0152SHEWANA3_0151
SSP387093 SUN_0024SUN_0031SUN_0030
SSP321332 CYB_1272CYB_2141CYB_2143
SSP321327 CYA_1967CYA_1965CYA_0996
SSED425104 SSED_4355SSED_4356SSED_4357SSED_4358
SPRO399741 SPRO_4248SPRO_4249SPRO_4250SPRO_4251
SPEA398579 SPEA_0147SPEA_0146SPEA_0145SPEA_0144
SONE211586 SO_0169SO_0168SO_0167SO_0166
SLOI323850 SHEW_3616SHEW_3617SHEW_3618SHEW_3619
SHAL458817 SHAL_4171SHAL_4172SHAL_4173SHAL_4174
SFUM335543 SFUM_0102SFUM_0118SFUM_3666SFUM_3658
SELO269084 SYC1451_DSYC2024_DSYC2022_DSYC1656_D
SDYS300267 SDY_3096SDY_3095SDY_3094SDY_3093
SDEN318161 SDEN_0124SDEN_0123SDEN_0122SDEN_0121
SDEG203122 SDE_3577SDE_3578SDE_3579SDE_3580
SBOY300268 SBO_3015SBO_3014SBO_3013
SBAL402882 SHEW185_0152SHEW185_0151SHEW185_0150SHEW185_0149
SBAL399599 SBAL195_0156SBAL195_0155SBAL195_0154SBAL195_0153
SALA317655 SALA_0318SALA_0317SALA_0316SALA_0315
SACI56780 SYN_01551SYN_01550SYN_01549SYN_01548
RXYL266117 RXYL_1158RXYL_1164RXYL_1166
RSOL267608 RSC3106RSC3116RSC3115RSC3114
RPAL316056 RPC_3007RPC_3008RPC_3009RPC_3010
RPAL316055 RPE_2661RPE_2663RPE_2669
RMET266264 RMET_3384RMET_3394RMET_3393RMET_3392
RFER338969 RFER_0534RFER_0544RFER_0543RFER_0542
REUT381666 H16_A3535H16_A3545H16_A3544H16_A3543
REUT264198 REUT_A3221REUT_A3231REUT_A3230REUT_A3229
PSYR223283 PSPTO_3315PSPTO_3316PSPTO_3317PSPTO_5128
PSYR205918 PSYR_3149PSYR_3150PSYR_3151PSYR_0407
PSTU379731 PST_0127PST_0126PST_0125PST_1786
PSP296591 BPRO_1321BPRO_1331BPRO_1330BPRO_1329
PSP117 RB5519RB3484RB12768RB13291
PPUT76869 PPUTGB1_1046PPUTGB1_1045PPUTGB1_1044PPUTGB1_1043
PPUT351746 PPUT_1090PPUT_1089PPUT_1088PPUT_1087
PPUT160488 PP_1049PP_1048PP_1047PP_1046
PPRO298386 PBPRA3478PBPRA3479PBPRA3480PBPRA3481
PNAP365044 PNAP_0764PNAP_0754PNAP_0755PNAP_0756
PMEN399739 PMEN_2923PMEN_2924PMEN_2925PMEN_2927
PLUM243265 PLU3638PLU3639PLU0091
PING357804 PING_0100PING_0099PING_0098PING_0097
PHAL326442 PSHAA0235PSHAA0234PSHAA0233PSHAA0232
PFLU220664 PFL_2752PFL_2758PFL_2757PFL_2756
PFLU216595 PFLU2419PFLU3230PFLU2424PFLU2423
PFLU205922 PFL_3179PFL_3173PFL_3174PFL_3175
PENT384676 PSEEN4278PSEEN2334PSEEN4280PSEEN4281
PCRY335284 PCRYO_0257PCRYO_0256PCRYO_0249PCRYO_1954
PCAR338963 PCAR_2147PCAR_0388PCAR_2134
PATL342610 PATL_0234PATL_0233PATL_0232PATL_0231
PAER208964 PA3101PA3102PA3103PA3105
PAER208963 PA14_24020PA14_24010PA14_23990PA14_23970
NSP35761 NOCA_1121NOCA_1127NOCA_1128
NSP103690 ALL0563ALL2442ALL2444
NOCE323261 NOC_2893NOC_2894NOC_2895NOC_0761
NMUL323848 NMUL_A1898NMUL_A1904NMUL_A1903NMUL_A1902
NMEN374833 NMCC_0852NMCC_1810NMCC_1814NMCC_0416
NMEN122587 NMA1110NMA2155NMA0650
NHAM323097 NHAM_0739NHAM_0740NHAM_0741NHAM_0742
NGON242231 NGO0456NGO1669NGO0094
NEUT335283 NEUT_0506NEUT_1043NEUT_1803
NEUR228410 NE1611NE0596NE1257NE0705
NARO279238 SARO_2650SARO_2651SARO_2652SARO_2653
MXAN246197 MXAN_3824MXAN_2512MXAN_2513MXAN_2514
MTHE264732 MOTH_1551MOTH_1552MOTH_1554
MSP409 M446_2021M446_2028M446_1175
MPET420662 MPE_A3128MPE_A3138MPE_A3137MPE_A3136
MMAR394221 MMAR10_0384MMAR10_0383MMAR10_0382MMAR10_0381
MLOT266835 MLL6827MLR6821MLR6819MLL6829
MFLA265072 MFLA_2421MFLA_2142MFLA_2141MFLA_2457
MCAP243233 MCA_1116MCA_1115MCA_1114MCA_1123
MAQU351348 MAQU_1351MAQU_1350MAQU_1349MAQU_2027
MAER449447 MAE_46550MAE_04110MAE_04090
LPNE400673 LPC_0778LPC_0779LPC_0734LPC_0735
LPNE297246 LPP1316LPP1317LPP1274LPP1275
LPNE297245 LPL1313LPL1314LPL1273LPL1274
LPNE272624 LPG1362LPG1363LPG1319LPG1320
LINT267671 LIC_11573LIC_11572LIC_11571LIC_11570
LINT189518 LA2372LA2373LA2374LA2375
LCHO395495 LCHO_3419LCHO_3429LCHO_3428LCHO_3427
LBOR355277 LBJ_1418LBJ_1419LBJ_1420LBJ_1421
LBOR355276 LBL_1642LBL_1643LBL_1644LBL_1645
LBIF456481 LEPBI_I1678LEPBI_I1677LEPBI_I1676LEPBI_I1675
LBIF355278 LBF_1628LBF_1627LBF_1626LBF_1625
KRAD266940 KRAD_3025KRAD_3026KRAD_1156
KPNE272620 GKPORF_B4442GKPORF_B4443GKPORF_B4444GKPORF_B4445
JSP375286 MMA_2997MMA_2996MMA_3364
ILOI283942 IL2023IL2024IL2025IL2026
HNEP81032 HNE_1868HNE_1867HNE_1866HNE_1865
HMOD498761 HM1_0252HM1_0251HM1_0249
HHAL349124 HHAL_2372HHAL_2371HHAL_2377HHAL_2370
HCHE349521 HCH_03935HCH_03936HCH_03937HCH_04610
HARS204773 HEAR3117HEAR1952HEAR2789HEAR3121
GVIO251221 GLR3426GLL2665GLL2667GLL0920
GURA351605 GURA_0680GURA_0681GURA_0682GURA_0683
GSUL243231 GSU_0326GSU_0327GSU_0328GSU_0329
GMET269799 GMET_3367GMET_3366GMET_3365GMET_3364
GBET391165 GBCGDNIH1_1767GBCGDNIH1_1757GBCGDNIH1_1756GBCGDNIH1_1765
FTUL458234 FTA_0195FTA_0876FTA_0845
FTUL418136 FTW_1859FTW_1167FTW_1195
FTUL401614 FTN_0070FTN_1116FTN_1137
FTUL393115 FTF0230CFTF1134FTF1156C
FTUL393011 FTH_0175FTH_0817FTH_0793
FTUL351581 FTL_0181FTL_0827FTL_0800
FSUC59374 FSU0174FSU1504FSU0658
FRANT FT.0230CPILCPILQ
EFER585054 EFER_2918EFER_2917EFER_2916EFER_2915
ECOL585397 ECED1_3993ECED1_3992ECED1_3991ECED1_3990
ECOL585057 ECIAI39_3453ECIAI39_3454ECIAI39_3455ECIAI39_3456
ECOL585056 ECUMN_3441ECUMN_3442ECUMN_3443ECUMN_3444
ECOL585055 EC55989_3375EC55989_3376EC55989_3377EC55989_3378
ECOL585035 ECS88_3716ECS88_3715ECS88_3714ECS88_3713
ECOL585034 ECIAI1_3107ECIAI1_3108ECIAI1_3109ECIAI1_3110
ECOL481805 ECOLC_0385ECOLC_0386ECOLC_0387ECOLC_0388
ECOL469008 ECBD_0423ECBD_0424ECBD_0425ECBD_0426
ECOL439855 ECSMS35_3244ECSMS35_3245ECSMS35_3246ECSMS35_3247
ECOL413997 ECB_03179ECB_03178ECB_03177ECB_03176
ECOL409438 ECSE_3242ECSE_3243ECSE_3244ECSE_3245
ECOL405955 APECO1_3124APECO1_3125APECO1_3126APECO1_3127
ECOL364106 UTI89_C3783UTI89_C3782UTI89_C3781UTI89_C3780
ECOL362663 ECP_3416ECP_3415ECP_3414ECP_3413
ECOL331111 ECE24377A_3424ECE24377A_3425ECE24377A_3426ECE24377A_3427
ECOL316407 ECK3315:JW3290:B3328ECK3314:JW3289:B3327ECK3313:JW3288:B3326ECK3312:JW5707:B3325
ECOL199310 C4099C4098C4097C4096
ECAR218491 ECA3106ECA3107ECA3108ECA3109
DRED349161 DRED_1024DRED_1036DRED_1034
DOLE96561 DOLE_1032DOLE_1045DOLE_1042DOLE_1041
DGEO319795 DGEO_2038DGEO_0757DGEO_0263
DARO159087 DARO_3221DARO_0880DARO_0966DARO_0214
CVIO243365 CV_3811CV_3812CV_3813CV_3814
CSP78 CAUL_2091CAUL_2090CAUL_2089CAUL_2098
CSAL290398 CSAL_2173CSAL_2175CSAL_2174CSAL_0612
CPSY167879 CPS_4588CPS_4589CPS_4590CPS_4591
CPRO264201 PC1896PC1897PC1475
CPER195103 CPF_2566CPF_2569CPF_2570
CJAP155077 CJA_3329CJA_3330CJA_3331CJA_3332
CHYD246194 CHY_0633CHY_0632CHY_0630
CDIF272563 CD2305CD3511CD3512
CDES477974 DAUD_0957DAUD_0970DAUD_0968
CAULO CC0176CC0175CC0174CC0173
BVIE269482 BCEP1808_0066BCEP1808_0068BCEP1808_0069BCEP1808_0070
BTHA271848 BTH_I0011BTH_I0009BTH_I0008BTH_I0007
BSP376 BRADO1295BRADO6347BRADO6348BRADO1291
BSP36773 BCEP18194_A3240BCEP18194_B1071BCEP18194_A3243BCEP18194_A3244
BPSE320373 BURPS668_0012BURPS668_0009BURPS668_0008BURPS668_0007
BPSE320372 BURPS1710B_A0236BURPS1710B_A0234BURPS1710B_A0233BURPS1710B_A0232
BPSE272560 BPSL0011BPSL0009BPSL0008BPSL0007
BPET94624 BPET2856BPET2866BPET2864BPET2865
BMAL320389 BMA10247_2666BMA10247_2664BMA10247_2663BMA10247_2662
BMAL320388 BMASAVP1_A3514BMASAVP1_A3516BMASAVP1_A3517BMASAVP1_A3518
BMAL243160 BMA_2781BMA_2784BMA_2785BMA_2786
BJAP224911 BLL6019BLL6021BLR6022
BCEN331272 BCEN2424_0058BCEN2424_0060BCEN2424_0061BCEN2424_0062
BCEN331271 BCEN_0012BCEN_0010BCEN_0009BCEN_0008
BBAC264462 BD1591BD1595BD1596BD1597
BAMB398577 BAMMC406_0058BAMMC406_0060BAMMC406_0061BAMMC406_0062
BAMB339670 BAMB_0048BAMB_0050BAMB_0051BAMB_0052
AVAR240292 AVA_0345AVA_0374AVA_0376
ASP76114 EBB170EBA4913EBA4914EBA4915
ASP62977 ACIAD0412ACIAD0411ACIAD3024ACIAD0294
ASP62928 AZO2097AZO3235AZO3234AZO3646
ASP232721 AJS_0675AJS_0663AJS_0666AJS_0667
ASAL382245 ASA_3778ASA_3777ASA_3776ASA_3775
AMET293826 AMET_3479AMET_3480AMET_3482
AMAR329726 AM1_1355AM1_0417AM1_2467
AHYD196024 AHA_0572AHA_0571AHA_0570AHA_0569
AFER243159 AFE_2075AFE_2843AFE_2305
AEHR187272 MLG_2391MLG_2392MLG_2399MLG_2401
ADEH290397 ADEH_0683ADEH_0684ADEH_0685ADEH_0686
ACRY349163 ACRY_0883ACRY_0892ACRY_0893ACRY_0885
ABOR393595 ABO_1314ABO_1313ABO_1312ABO_0433
ABAU360910 BAV0342BAV0332BAV0334BAV0333
ABAC204669 ACID345_1177ACID345_1390ACID345_1392ACID345_1473
AAVE397945 AAVE_0925AAVE_3974AAVE_0916AAVE_0917
AAEO224324 AQ_418AQ_747AQ_1474AQ_1288


Organism features enriched in list (features available for 197 out of the 210 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 4.214e-81092
Arrangment:Clusters 0.0072338117
Disease:Bubonic_plague 0.001414566
Disease:Gastroenteritis 0.00145011013
Disease:Tularemia 0.004258455
Endospores:No 7.468e-843211
Endospores:Yes 0.0009042853
GC_Content_Range4:0-40 9.017e-2222213
GC_Content_Range4:40-60 1.110e-6102224
GC_Content_Range4:60-100 2.212e-672145
GC_Content_Range7:0-30 4.998e-7247
GC_Content_Range7:30-40 1.133e-1320166
GC_Content_Range7:50-60 7.814e-758107
GC_Content_Range7:60-70 6.639e-769134
Genome_Size_Range5:0-2 2.153e-237155
Genome_Size_Range5:4-6 1.378e-12100184
Genome_Size_Range5:6-10 0.00003042947
Genome_Size_Range9:1-2 2.142e-177128
Genome_Size_Range9:2-3 0.001023727120
Genome_Size_Range9:4-5 0.00014284896
Genome_Size_Range9:5-6 7.916e-85288
Genome_Size_Range9:6-8 0.00002412538
Gram_Stain:Gram_Neg 4.031e-21164333
Gram_Stain:Gram_Pos 5.690e-1910150
Habitat:Aquatic 0.00483664191
Habitat:Host-associated 8.457e-744206
Habitat:Multiple 0.000264578178
Motility:No 1.159e-824151
Motility:Yes 1.694e-11128267
Optimal_temp.:- 3.895e-6112257
Optimal_temp.:28-30 0.000468277
Optimal_temp.:37 4.115e-715106
Oxygen_Req:Aerobic 0.000024984185
Oxygen_Req:Anaerobic 0.000015017102
Pathogenic_in:Human 0.000584655213
Pathogenic_in:Plant 0.00152831115
Shape:Coccus 5.484e-61182
Shape:Rod 1.551e-9150347
Temp._range:Psychrophilic 0.007563779



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 367
Effective number of orgs (counting one per cluster within 468 clusters): 282

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT21
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP644076 Silicibacter sp. TrichCH4B0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1131 Synechococcus sp. CC96050
SSON300269 ncbi Shigella sonnei Ss0461
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4761
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B671
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91501
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT181
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty21
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm701
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM1
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW201
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP1
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP1
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GOXY290633 ncbi Gluconobacter oxydans 621H1
GFOR411154 ncbi Gramella forsetii KT08030
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ESP42895 Enterobacter sp.1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE451
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7706   G7705   G7704   G7703   
ZMOB264203
WSUC273121 WS0543
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_0090
TROS309801
TPEN368408
TPAL243276
TMAR243274 TM_0837
TKOD69014
TFUS269800
TERY203124 TERY_1748
TDEN326298 TMDEN_1387
TDEN243275
TACI273075
STYP99287 STM3488
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471 GSYN0691
SSP644076
SSP292414
SSP1131
SSON300269 SSO_0116
SSOL273057
SSAP342451
SRUB309807
SPYO370554 MGAS10750_SPY0095
SPYO370553 MGAS2096_SPY0091
SPYO370552 MGAS10270_SPY0090
SPYO370551 MGAS9429_SPY0089
SPYO319701 M28_SPY0086
SPYO293653 M5005_SPY0088
SPYO286636 M6_SPY0136
SPYO198466 SPYM3_0080
SPYO193567
SPYO186103 SPYM18_0105
SPYO160490 SPY0103
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313 SPJ_2057
SMUT210007 SMU_1984
SMEL266834
SMED366394
SMAR399550
SLAC55218
SHAE279808
SGOR29390
SGLO343509 SG1282
SERY405948
SEPI176280
SEPI176279
SENT454169 SEHA_C3794
SENT321314 SCH_3420
SENT295319 SPA3353
SENT220341 STY4308
SENT209261 T4018
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435
SAGA205921
SACI330779
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSP101510
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL258594
RMAS416276
RLEG216596
RFEL315456
RETL347834 RHE_PE00306
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PSP56811 PSYCPRWF_0150
PSP312153
PRUM264731
PPEN278197
PMUL272843 PM1225
PMOB403833
PMAR93060
PMAR74546 PMT9312_1187
PMAR59920
PMAR167555
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225 PLUT_0659
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109 OB1910
OCAR504832
OANT439375
NWIN323098
NSEN222891
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988 MS1970
MSTA339860
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MEXT419610 MEXT_0031
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177 BSPH_3614
LSAK314315
LREU557436
LPLA220668 LP_2247
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622 LACR_2425
LJOH257314
LINT363253
LINN272626
LHEL405566 LHV_0780
LGAS324831
LDEL390333 LDB0681
LDEL321956 LBUL_0612
LCAS321967
LBRE387344
LACI272621 LBA0737
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400 HSM_1067
HSOM205914 HS_1112
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HINF71421 HI_0435
HINF374930 CGSHIEE_00815
HINF281310 NTHI0560
HHEP235279
HDUC233412 HD_0434
HBUT415426
HAUR316274
HACI382638
GOXY290633 GOX0992
GFOR411154
FSP1855 FRANEAN1_2610
FSP106370
FNUC190304
FJOH376686
FALN326424
ESP42895 ENT638_0650
ERUM302409
ERUM254945
ELIT314225
EFAE226185 EF_2044
ECHA205920
ECAN269484
DSP255470 CBDBA1303
DSP216389 DEHABAV1_1164
DSHI398580
DDES207559
CVES412965
CTRA471473 CTLON_0828
CTRA471472 CTL0834
CTET212717
CTEP194439
CSUL444179
CSP501479 CSE45_5461
CRUT413404
CPNE182082 CPB0845
CPNE138677 CPJ0816
CPNE115713 CPN0816
CPNE115711 CP_1055
CPHY357809
CPEL335992 SAR11_0058
CMUR243161 TC_0860
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1113
CJEJ407148 C8J_1259
CJEJ360109 JJD26997_0367
CJEJ354242 CJJ81176_1342
CJEJ195099 CJE_1532
CJEJ192222 CJ1343C
CJEI306537
CHUT269798
CHOM360107 CHAB381_1565
CGLU196627
CFEL264202 CF0067
CEFF196164
CDIP257309
CCUR360105 CCV52592_1963
CCON360104 CCC13826_1109
CCHL340177
CCAV227941 CCA_00947
CBUR434922
CBUR360115 COXBURSA331_A2096
CBUR227377 CBU_1891
CBLO291272
CBLO203907
CACE272562 CAC0989
BXEN266265
BWEI315730
BTUR314724
BTRI382640
BTHU412694 BALH_3838
BTHU281309 BT9727_3983
BTHE226186
BSUI470137
BSUI204722
BSUB
BSP107806
BQUI283165
BPUM315750
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BLON206672
BLIC279010
BHER314723
BHEN283166
BHAL272558 BH2827
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264 BCA_4351
BCER405917
BCER315749 BCER98_2926
BCER288681
BCER226900
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP1667
APLE434271 APJL_0201
APLE416269 APL_0200
APHA212042
APER272557
ANAE240017
AMAR234826
ALAI441768
AFUL224325
ACAU438753
ABUT367737 ABU_1833
AAUR290340


Organism features enriched in list (features available for 343 out of the 367 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00020886992
Arrangment:Clusters 0.00127941617
Disease:Food_poisoning 0.008083899
Disease:Gastroenteritis 0.0076359313
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00273361111
Disease:Wide_range_of_infections 0.00273361111
Endospores:No 9.168e-12162211
GC_Content_Range4:0-40 2.045e-16171213
GC_Content_Range4:40-60 1.254e-7102224
GC_Content_Range4:60-100 0.000958670145
GC_Content_Range7:30-40 2.301e-14137166
GC_Content_Range7:50-60 4.475e-838107
GC_Content_Range7:60-70 0.000295562134
Genome_Size_Range5:0-2 3.148e-21138155
Genome_Size_Range5:4-6 1.206e-1073184
Genome_Size_Range5:6-10 0.00158361847
Genome_Size_Range9:0-1 3.882e-72727
Genome_Size_Range9:1-2 1.728e-14111128
Genome_Size_Range9:2-3 0.002871083120
Genome_Size_Range9:3-4 0.00020163177
Genome_Size_Range9:4-5 0.00009404096
Genome_Size_Range9:5-6 6.627e-63388
Genome_Size_Range9:6-8 0.00094461338
Gram_Stain:Gram_Neg 3.678e-16149333
Gram_Stain:Gram_Pos 3.065e-12123150
Habitat:Aquatic 0.00484174391
Habitat:Host-associated 1.998e-8152206
Habitat:Multiple 0.000220786178
Motility:No 4.700e-10120151
Motility:Yes 6.265e-11119267
Optimal_temp.:- 0.0003434132257
Optimal_temp.:25-35 0.00542171314
Optimal_temp.:30-37 0.00078261718
Optimal_temp.:37 0.000956176106
Oxygen_Req:Aerobic 0.003207695185
Pathogenic_in:Human 0.0025649140213
Pathogenic_in:Plant 0.0087871415
Shape:Coccus 0.00001636582
Shape:Irregular_coccus 0.00127941617
Shape:Rod 6.490e-11167347



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2461620.5493
PWY-4041 (γ-glutamyl cycle)2791730.5391
AST-PWY (arginine degradation II (AST pathway))1201020.5300
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181470.5234
TYRFUMCAT-PWY (tyrosine degradation I)1841310.5134
PWY-5918 (heme biosynthesis I)2721660.5088
PWY-1269 (CMP-KDO biosynthesis I)3251840.5061
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551590.5044
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481910.5040
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861700.5015
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951340.4999
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391870.4959
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001720.4817
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982020.4796
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251420.4677
PWY-5386 (methylglyoxal degradation I)3051680.4428
PWY-6087 (4-chlorocatechol degradation)2231370.4380
PWY-5340 (sulfate activation for sulfonation)3851920.4349
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891610.4329
PWY-5913 (TCA cycle variation IV)3011650.4318
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911610.4282
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491040.4281
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651850.4272
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961620.4231
PWY0-501 (lipoate biosynthesis and incorporation I)3851900.4209
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911210.4170
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901590.4169
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831170.4124
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221990.4122
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291710.4088
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911190.4022
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111640.4018



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7705   G7704   G7703   
G77060.9998220.9998110.999688
G77050.9999120.999691
G77040.999788
G7703



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PAIRWISE BLAST SCORES:

  G7706   G7705   G7704   G7703   
G77060.0f0---
G7705-0.0f0--
G7704--0.0f0-
G7703---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-3382 (GspC-O secreton  complex) (degree of match pw to cand: 0.333, degree of match cand to pw: 1.000, average score: 0.987)
  Genes in pathway or complex:
             0.9965 0.9947 EG11359 (gspO) EG11359-MONOMER (leader peptidase, integral membrane protein)
             0.9857 0.9800 EG12173 (gspM) EG12173-MONOMER (putative protein secretion protein)
             0.9985 0.9984 G7711 (gspL) G7711-MONOMER (putative protein secretion protein for export)
             0.9993 0.9992 G7710 (gspK) G7710-MONOMER (putative protein secretion protein for export)
             0.9992 0.9991 G7709 (gspJ) G7709-MONOMER (putative protein secretion protein for export)
             0.9992 0.9991 G7708 (gspI) G7708-MONOMER (putative protein secretion protein for export)
             0.9556 0.9495 G7707 (gspH) G7707-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9998 0.9997 G7706 (gspG) G7706-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9999 0.9997 G7705 (gspF) G7705-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9999 0.9998 G7704 (gspE) G7704-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9998 0.9997 G7703 (gspD) G7703-MONOMER (putative protein secretion protein for export)
             0.9982 0.9980 G7702 (gspC) G7702-MONOMER (putative protein secretion protein for export)
  All candidate genes found in this pathway



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7703 G7704 G7705 G7706 (centered at G7705)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7706   G7705   G7704   G7703   
265/623237/623248/623225/623
AAEO224324:0:Tyes0223741604
AAVE397945:0:Tyes9300301
ABAC204669:0:Tyes0213215296
ABAU360910:0:Tyes10021
ABOR393595:0:Tyes9019008990
ABUT367737:0:Tyes---0
ACEL351607:0:Tyes-02-
ACRY349163:8:Tyes09102
ADEH290397:0:Tyes0123
AEHR187272:0:Tyes01810
AFER243159:0:Tyes-0757225
AHYD196024:0:Tyes3210
AMAR329726:9:Tyes92202024-
AMET293826:0:Tyes013-
AORE350688:0:Tyes-02-
APLE416269:0:Tyes---0
APLE434271:0:Tno---0
ASAL382245:5:Tyes3210
ASP232721:2:Tyes12034
ASP62928:0:Tyes0115011491565
ASP62977:0:Tyes10710625400
ASP76114:2:Tyes0123
AVAR240292:3:Tyes02931-
BAMB339670:3:Tno0234
BAMB398577:3:Tno0234
BBAC264462:0:Tyes0456
BCEN331271:2:Tno4210
BCEN331272:3:Tyes0234
BCER315749:1:Tyes0---
BCER572264:1:Tno0---
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YPSE273123:2:Tno0123
YPSE349747:2:Tno3210



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