CANDIDATE ID: 283

CANDIDATE ID: 283

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9984833e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    0.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6877 (tppB) (b1634)
   Products of gene:
     - B1634-MONOMER (TppB peptide POT Transporter)
       Reactions:
        a tripeptide[periplasmic space] + H+[periplasmic space]  ->  a tripeptide[cytosol] + H+[cytosol]

- G6378 (dtpD) (b0709)
   Products of gene:
     - B0709-MONOMER (DtpD peptide POT Transporter)
       Reactions:
        a dipeptide[periplasmic space] + H+[periplasmic space]  ->  a dipeptide[cytosol] + H+[cytosol]

- EG12469 (yjdL) (b4130)
   Products of gene:
     - YJDL-MONOMER (YjdL peptide transporter)
       Reactions:
        a dipeptide[periplasmic space] + H+[periplasmic space]  ->  a dipeptide[cytosol] + H+[cytosol]

- EG12232 (dtpB) (b3496)
   Products of gene:
     - YHIP-MONOMER (DtpB dipeptide transporter)
       Reactions:
        a dipeptide[periplasmic space] + H+[periplasmic space]  ->  a dipeptide[cytosol] + H+[cytosol]



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 224
Effective number of orgs (counting one per cluster within 468 clusters): 130

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM44
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE322159 ncbi Streptococcus thermophilus LMD-94
STHE299768 ncbi Streptococcus thermophilus CNRZ10664
STHE264199 ncbi Streptococcus thermophilus LMG 183114
SSP94122 ncbi Shewanella sp. ANA-34
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SRUB309807 ncbi Salinibacter ruber DSM 138554
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23384
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122284
SEPI176279 ncbi Staphylococcus epidermidis RP62A4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SAUR93062 ncbi Staphylococcus aureus aureus COL3
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83253
SAUR426430 ncbi Staphylococcus aureus aureus Newman3
SAUR418127 ncbi Staphylococcus aureus aureus Mu33
SAUR367830 Staphylococcus aureus aureus USA3003
SAUR359787 ncbi Staphylococcus aureus aureus JH13
SAUR359786 ncbi Staphylococcus aureus aureus JH93
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4763
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2523
SAUR273036 ncbi Staphylococcus aureus RF1223
SAUR196620 ncbi Staphylococcus aureus aureus MW23
SAUR158879 ncbi Staphylococcus aureus aureus N3153
SAUR158878 ncbi Staphylococcus aureus aureus Mu503
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SAGA211110 ncbi Streptococcus agalactiae NEM3164
SAGA208435 ncbi Streptococcus agalactiae 2603V/R4
SAGA205921 ncbi Streptococcus agalactiae A9094
RSP101510 ncbi Rhodococcus jostii RHA14
PSP56811 Psychrobacter sp.4
PPRO298386 ncbi Photobacterium profundum SS94
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257454
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PACN267747 ncbi Propionibacterium acnes KPA1712024
OTSU357244 ncbi Orientia tsutsugamushi Boryong4
NFAR247156 ncbi Nocardia farcinica IFM 101524
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16224
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-14
MSME246196 ncbi Mycobacterium smegmatis MC2 1554
MMAR394221 ncbi Maricaulis maris MCS104
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK4
LXYL281090 ncbi Leifsonia xyli xyli CTCB074
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53344
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LSAK314315 ncbi Lactobacillus sakei sakei 23K4
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LPLA220668 ncbi Lactobacillus plantarum WCFS14
LMON265669 ncbi Listeria monocytogenes 4b F23654
LMON169963 ncbi Listeria monocytogenes EGD-e4
LLAC272623 ncbi Lactococcus lactis lactis Il14034
LLAC272622 ncbi Lactococcus lactis cremoris SK114
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-004
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1304
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566014
LINN272626 ncbi Listeria innocua Clip112624
LCAS321967 ncbi Lactobacillus casei ATCC 3344
LBRE387344 ncbi Lactobacillus brevis ATCC 3674
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1974
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5504
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)4
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HNEP81032 Hyphomonas neptunium4
GVIO251221 ncbi Gloeobacter violaceus PCC 74213
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GOXY290633 ncbi Gluconobacter oxydans 621H4
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GFOR411154 ncbi Gramella forsetii KT08034
GBET391165 ncbi Granulibacter bethesdensis CGDNIH14
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FJOH376686 ncbi Flavobacterium johnsoniae UW1014
ESP42895 Enterobacter sp.4
ELIT314225 ncbi Erythrobacter litoralis HTCC25944
EFER585054 ncbi Escherichia fergusonii ATCC 354694
EFAE226185 ncbi Enterococcus faecalis V5834
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DRED349161 ncbi Desulfotomaculum reducens MI-14
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSP78 Caulobacter sp.3
CSAL290398 ncbi Chromohalobacter salexigens DSM 30433
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CJEJ407148 ncbi Campylobacter jejuni jejuni 811163
CJEJ360109 ncbi Campylobacter jejuni doylei 269.974
CJEJ195099 ncbi Campylobacter jejuni RM12213
CJEI306537 ncbi Corynebacterium jeikeium K4114
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130323
CEFF196164 ncbi Corynebacterium efficiens YS-3143
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131293
CDIF272563 ncbi Clostridium difficile 6303
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1114
CBUR360115 ncbi Coxiella burnetii RSA 3314
CBUR227377 ncbi Coxiella burnetii RSA 4934
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland3
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80523
CAULO ncbi Caulobacter crescentus CB153
CACE272562 ncbi Clostridium acetobutylicum ATCC 8243
BXEN266265 ncbi Burkholderia xenovorans LB4004
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54824
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUB ncbi Bacillus subtilis subtilis 1684
BSP36773 Burkholderia sp.4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
ASP1667 Arthrobacter sp.4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
ANAE240017 Actinomyces oris MG13
AHYD196024 Aeromonas hydrophila dhakensis4
AAUR290340 ncbi Arthrobacter aurescens TC14


Names of the homologs of the genes in the group in each of these orgs
  G6877   G6378   EG12469   EG12232   
ZMOB264203 ZMO1001ZMO1001ZMO1001ZMO1001
YPSE349747 YPSIP31758_1778YPSIP31758_1778YPSIP31758_1778YPSIP31758_1778
YPSE273123 YPTB2278YPTB2278YPTB2278YPTB2278
YPES386656 YPDSF_0782YPDSF_0782YPDSF_0782YPDSF_0782
YPES377628 YPN_1821YPN_1821YPN_1821YPN_1821
YPES360102 YPA_1710YPA_1710YPA_1710YPA_1710
YPES349746 YPANGOLA_A2548YPANGOLA_A2548YPANGOLA_A2548YPANGOLA_A2548
YPES214092 YPO2361YPO2361YPO2361YPO2361
YPES187410 Y1971Y1971Y1971Y1971
YENT393305 YE2133YE2133YE2133YE2391
XORY360094 XOOORF_0800XOOORF_0800XOOORF_0800XOOORF_0800
XORY342109 XOO3849XOO3849XOO3849XOO3849
XORY291331 XOO4074XOO4074XOO4074XOO4074
XFAS405440 XFASM12_1074XFASM12_1074XFASM12_1074XFASM12_1074
XFAS183190 PD_0900PD_0900PD_0900PD_0900
XFAS160492 XF1891XF1891XF1891XF1891
XCAM487884 XCC-B100_0467XCC-B100_0467XCC-B100_0467XCC-B100_0467
XCAM316273 XCAORF_4076XCAORF_4076XCAORF_4076XCAORF_4076
XCAM314565 XC_0447XC_0447XC_0447XC_0447
XCAM190485 XCC0433XCC0433XCC0433XCC0433
XAXO190486 XAC0449XAC0449XAC0449XAC0449
VVUL216895 VV1_0185VV1_0185VV1_0185VV1_0185
VVUL196600 VV1005VV1005VV1005VV1005
VPAR223926 VP0824VP0824VP0824VP0824
VFIS312309 VFA0124VFA0123VFA0123VF1124
VCHO345073 VC0395_A0509VC0395_A0509VC0395_A0509VC0395_A0509
VCHO VC0988VC0988VC0988VC0988
STYP99287 STM1452STM0710STM0710STM1452
STHE322159 STER_0984STER_0984STER_0984STER_0984
STHE299768 STR0970STR0970STR0970STR0970
STHE264199 STU0970STU0970STU0970STU0970
SSP94122 SHEWANA3_3089SHEWANA3_3089SHEWANA3_3089SHEWANA3_3089
SSON300269 SSO_1524SSO_0660SSO_0660SSO_1524
SSED425104 SSED_3034SSED_3034SSED_3034SSED_3034
SSAP342451 SSP1991SSP1990SSP1990SSP1991
SRUB309807 SRU_1962SRU_1962SRU_1962SRU_1962
SPRO399741 SPRO_2233SPRO_3766SPRO_3766SPRO_2233
SPEA398579 SPEA_1393SPEA_1393SPEA_1393SPEA_1393
SONE211586 SO_1277SO_1277SO_1277SO_1277
SLOI323850 SHEW_1397SHEW_1397SHEW_1397SHEW_1397
SHIGELLA YDGRYBGHYBGHYDGR
SHAL458817 SHAL_1481SHAL_1481SHAL_1481SHAL_1481
SHAE279808 SH2170SH2166SH2170SH2166
SFLE373384 SFV_1651SFV_0626SFV_0626SFV_1651
SFLE198214 AAN43241.1AAN42230.1AAN42230.1AAN43241.1
SERY405948 SACE_3830SACE_3830SACE_3830SACE_3830
SEPI176280 SE_0509SE_0509SE_0509SE_0509
SEPI176279 SERP0392SERP0392SERP0392SERP0392
SENT454169 SEHA_C3905SEHA_C2823SEHA_C2823SEHA_C3905
SENT321314 SCH_3521SCH_2555SCH_2555SCH_3521
SENT295319 SPA3449SPA2031SPA2031SPA3449
SENT220341 STY4211STY0750STY0750STY4211
SENT209261 T1320T2166T2166T3924
SDYS300267 SDY_1857SDY_4467SDY_4467SDY_1857
SDEN318161 SDEN_1357SDEN_3303SDEN_1357SDEN_1357
SCO SCO3064SCO3064SCO3064SCO3064
SBOY300268 SBO_3494SBO_0568SBO_0568SBO_3494
SBAL402882 SHEW185_1174SHEW185_1551SHEW185_1174SHEW185_1174
SBAL399599 SBAL195_1207SBAL195_1585SBAL195_1207SBAL195_1207
SAVE227882 SAV3482SAV3482SAV3482SAV3482
SAUR93062 SACOL0788SACOL0788SACOL0788
SAUR93061 SAOUHSC_00738SAOUHSC_00738SAOUHSC_00738
SAUR426430 NWMN_0696NWMN_0696NWMN_0696
SAUR418127 SAHV_0724SAHV_0724SAHV_0724
SAUR367830 SAUSA300_0712SAUSA300_0712SAUSA300_0712
SAUR359787 SAURJH1_0767SAURJH1_0767SAURJH1_0767
SAUR359786 SAURJH9_0750SAURJH9_0750SAURJH9_0750
SAUR282459 SAS0692SAS0692SAS0692
SAUR282458 SAR0781SAR0781SAR0781
SAUR273036 SAB0676CSAB0676CSAB0676C
SAUR196620 MW0689MW0689MW0689
SAUR158879 SA0682SA0682SA0682
SAUR158878 SAV0727SAV0727SAV0727
SALA317655 SALA_0954SALA_0954SALA_0954SALA_0954
SAGA211110 GBS1513GBS1513GBS1513GBS1513
SAGA208435 SAG_1444SAG_1444SAG_1444SAG_1444
SAGA205921 SAK_1478SAK_1478SAK_1478SAK_1478
RSP101510 RHA1_RO05158RHA1_RO05158RHA1_RO05158RHA1_RO05158
PSP56811 PSYCPRWF_2335PSYCPRWF_2335PSYCPRWF_2335PSYCPRWF_2335
PPRO298386 PBPRA1529PBPRA2644PBPRA2644PBPRA1529
PPEN278197 PEPE_1534PEPE_1534PEPE_1534PEPE_1534
PLUM243265 PLU0973PLU0973PLU1813PLU0973
PHAL326442 PSHAA2166PSHAA2166PSHAA2166PSHAA2166
PCRY335284 PCRYO_2274PCRYO_2274PCRYO_2274PCRYO_2274
PATL342610 PATL_3244PATL_3244PATL_3244PATL_3244
PACN267747 PPA0138PPA0138PPA0138PPA0138
OTSU357244 OTBS_0662OTBS_0662OTBS_0662OTBS_0662
NFAR247156 NFA48510NFA48510NFA48510NFA48510
NARO279238 SARO_0163SARO_0163SARO_0163SARO_0163
MXAN246197 MXAN_2607MXAN_2607MXAN_2607MXAN_2607
MVAN350058 MVAN_3792MVAN_3792MVAN_3792MVAN_3792
MSME246196 MSMEG_3533MSMEG_3533MSMEG_3533MSMEG_3533
MMAR394221 MMAR10_2239MMAR10_2239MMAR10_2239MMAR10_2239
MGIL350054 MFLV_2746MFLV_2746MFLV_2746MFLV_2746
LXYL281090 LXX02570LXX02570LXX02570LXX02570
LWEL386043 LWE0520LWE0520LWE0520LWE0520
LSPH444177 BSPH_4370BSPH_4370BSPH_4370BSPH_4370
LSAK314315 LSA1592LSA1592LSA1592LSA1592
LPNE400673 LPC_3091LPC_3091LPC_3091LPC_3091
LPNE297246 LPP2851LPP2851LPP2851LPP2851
LPNE297245 LPL2720LPL2720LPL2720LPL2720
LPNE272624 LPG2805LPG2805LPG2805LPG2805
LPLA220668 LP_0551LP_0551LP_0551LP_0551
LMON265669 LMOF2365_0584LMOF2365_0584LMOF2365_0584LMOF2365_0584
LMON169963 LMO0555LMO0555LMO0555LMO0555
LLAC272623 L104437L104437L104437L104437
LLAC272622 LACR_0734LACR_0734LACR_0734LACR_0734
LINT363253 LIC090LIC090LIC090LIC090
LINT267671 LIC_11535LIC_11535LIC_11535LIC_11535
LINT189518 LA2414LA2414LA2414LA2414
LINN272626 LIN0564LIN0564LIN0564LIN0564
LCAS321967 LSEI_1813LSEI_1813LSEI_1813LSEI_1813
LBRE387344 LVIS_0534LVIS_0534LVIS_0534LVIS_0534
LBOR355277 LBJ_1261LBJ_1261LBJ_1261LBJ_1261
LBOR355276 LBL_1486LBL_1486LBL_1486LBL_1486
LBIF456481 LEPBI_I1870LEPBI_I1870LEPBI_I1870LEPBI_I1870
LBIF355278 LBF_1815LBF_1815LBF_1815LBF_1815
KPNE272620 GKPORF_B1070GKPORF_B5147GKPORF_B5147GKPORF_B3211
ILOI283942 IL1430IL1430IL1430IL1430
HNEP81032 HNE_1376HNE_1376HNE_1376HNE_1376
GVIO251221 GLL2262GLL2262GLL2262
GTHE420246 GTNG_1910GTNG_1910GTNG_1910GTNG_1910
GOXY290633 GOX1415GOX1415GOX1415GOX1415
GKAU235909 GK2020GK2020GK2020GK2020
GFOR411154 GFO_2971GFO_2971GFO_2971GFO_2970
GBET391165 GBCGDNIH1_1861GBCGDNIH1_1861GBCGDNIH1_1861GBCGDNIH1_1861
FTUL458234 FTA_1325FTA_1325FTA_1325FTA_1325
FTUL418136 FTW_0851FTW_0851FTW_0851FTW_0851
FTUL401614 FTN_0832FTN_1251FTN_1251FTN_0832
FTUL393115 FTF0953CFTF1233CFTF1233CFTF0953C
FTUL393011 FTH_1228FTH_1228FTH_1228FTH_1228
FTUL351581 FTL_1251FTL_1251FTL_1251FTL_1251
FRANT FT.0954CYJDLYJDLFT.0954C
FPHI484022 FPHI_1782FPHI_0253FPHI_0253FPHI_1782
FJOH376686 FJOH_1421FJOH_1421FJOH_1421FJOH_1421
ESP42895 ENT638_1814ENT638_1814ENT638_1814ENT638_1814
ELIT314225 ELI_12485ELI_12485ELI_12485ELI_12485
EFER585054 EFER_3489EFER_2408EFER_2408EFER_3489
EFAE226185 EF_0440EF_0440EF_0440EF_0440
ECOO157 YHIPYBGHYBGHYHIP
ECOL83334 ECS2343ECS0734ECS0734ECS2343
ECOL585397 ECED1_1835ECED1_0681ECED1_0681ECED1_1835
ECOL585057 ECIAI39_3986ECIAI39_0661ECIAI39_0661ECIAI39_3986
ECOL585056 ECUMN_1925ECUMN_0787ECUMN_0787ECUMN_1925
ECOL585055 EC55989_3934EC55989_4623EC55989_4623EC55989_3934
ECOL585035 ECS88_3901ECS88_4634ECS88_4634ECS88_3901
ECOL585034 ECIAI1_3641ECIAI1_4363ECIAI1_4363ECIAI1_3641
ECOL481805 ECOLC_1995ECOLC_3897ECOLC_3897ECOLC_1995
ECOL469008 ECBD_2009ECBD_3900ECBD_3900ECBD_2009
ECOL439855 ECSMS35_1565ECSMS35_0724ECSMS35_0724ECSMS35_1565
ECOL413997 ECB_03345ECB_04001ECB_04001ECB_03345
ECOL409438 ECSE_3761ECSE_4430ECSE_4430ECSE_3761
ECOL405955 APECO1_717APECO1_1366APECO1_1366APECO1_717
ECOL364106 UTI89_C4015UTI89_C4727UTI89_C4727UTI89_C4015
ECOL362663 ECP_3586ECP_4374ECP_4374ECP_3586
ECOL331111 ECE24377A_3978ECE24377A_0734ECE24377A_0734ECE24377A_3978
ECOL316407 ECK3481:JW3463:B3496ECK4124:JW4091:B4130ECK4124:JW4091:B4130ECK3481:JW3463:B3496
ECOL199310 C4295C5139C5139C4295
ECAR218491 ECA2283ECA2283ECA2283ECA2283
DRED349161 DRED_0623DRED_0623DRED_0623DRED_0623
CVIO243365 CV_3755CV_1162CV_3755CV_3755
CSP78 CAUL_0374CAUL_0374CAUL_0374
CSAL290398 CSAL_2925CSAL_2925CSAL_2925
CPSY167879 CPS_3369CPS_3369CPS_3647CPS_3647
CPER289380 CPR_0510CPR_0510CPR_0510CPR_0510
CPER195103 CPF_0523CPF_0523CPF_0523CPF_0523
CPER195102 CPE0544CPE0544CPE0544CPE0544
CJEJ407148 C8J_0614C8J_0613C8J_0614
CJEJ360109 JJD26997_1344JJD26997_1344JJD26997_1344JJD26997_1344
CJEJ195099 CJE_0757CJE_0757CJE_0757
CJEI306537 JK1242JK1242JK1242JK1242
CGLU196627 CG3382CG2884CG3382
CEFF196164 CE2903CE1423CE2903
CDIP257309 DIP1190DIP1190DIP1190
CDIF272563 CD2262CD2262CD2262
CBUR434922 COXBU7E912_1525COXBU7E912_1572COXBU7E912_1525COXBU7E912_1525
CBUR360115 COXBURSA331_A0652COXBURSA331_A0615COXBURSA331_A0652COXBURSA331_A0652
CBUR227377 CBU_0539CBU_0504CBU_0539CBU_0539
CBOT536232 CLM_1774CLM_1924CLM_1924
CBOT515621 CLJ_B1639CLJ_B1945CLJ_B1945CLJ_B1639
CBOT498213 CLD_3016CLD_2875CLD_2875
CBOT441772 CLI_1618CLI_1759CLI_1759
CBOT441771 CLC_1571CLC_1707CLC_1707CLC_1571
CBOT441770 CLB_1560CLB_1699CLB_1699CLB_1560
CBOT36826 CBO1539CBO1764CBO1764CBO1539
CBEI290402 CBEI_2122CBEI_2122CBEI_2122
CAULO CC3413CC3413CC3413
CACE272562 CAC0751CAC0751CAC0751
BXEN266265 BXE_B0759BXE_B0759BXE_B0759BXE_B0759
BWEI315730 BCERKBAB4_0604BCERKBAB4_0604BCERKBAB4_0528BCERKBAB4_0528
BVIE269482 BCEP1808_3708BCEP1808_3708BCEP1808_3708BCEP1808_3708
BTHU412694 BALH_0628BALH_0628BALH_0551BALH_0551
BTHU281309 BT9727_0599BT9727_0599BT9727_0524BT9727_0524
BTHE226186 BT_4385BT_4385BT_4385BT_4385
BTHA271848 BTH_II2221BTH_II2221BTH_II2221BTH_II2221
BSUB BSU03670BSU03670BSU03670BSU03670
BSP36773 BCEP18194_B0113BCEP18194_B0113BCEP18194_B0113BCEP18194_B0113
BPUM315750 BPUM_0343BPUM_0343BPUM_0343BPUM_0343
BPSE320373 BURPS668_A3023BURPS668_A3023BURPS668_A3023BURPS668_A3023
BPSE320372 BURPS1710B_B1488BURPS1710B_B1488BURPS1710B_B1488BURPS1710B_B1488
BPSE272560 BPSS2143BPSS2143BPSS2143BPSS2143
BMAL320389 BMA10247_A0382BMA10247_A0382BMA10247_A0382BMA10247_A0382
BMAL320388 BMASAVP1_1531BMASAVP1_1531BMASAVP1_1531BMASAVP1_1531
BMAL243160 BMA_A0348BMA_A0348BMA_A0348BMA_A0348
BLIC279010 BL01845BL01845BL01845BL01845
BCER572264 BCA_0725BCA_0725BCA_0648BCA_0648
BCER405917 BCE_0757BCE_0757BCE_0682BCE_0757
BCER315749 BCER98_0531BCER98_0531BCER98_0531BCER98_0531
BCER288681 BCE33L0600BCE33L0600BCE33L0524BCE33L0524
BCER226900 BC_0684BC_0684BC_0615BC_0615
BCEN331272 BCEN2424_5544BCEN2424_5544BCEN2424_5544BCEN2424_5544
BCEN331271 BCEN_5316BCEN_5316BCEN_5316BCEN_5316
BANT592021 BAA_0772BAA_0772BAA_0772BAA_0772
BANT568206 BAMEG_3897BAMEG_3897BAMEG_3897BAMEG_3897
BANT261594 GBAA0689GBAA0689GBAA0689GBAA0689
BANT260799 BAS0655BAS0655BAS0655BAS0655
BAMY326423 RBAM_003840RBAM_003840RBAM_003840RBAM_003840
BAMB398577 BAMMC406_5415BAMMC406_5415BAMMC406_5415BAMMC406_5415
BAMB339670 BAMB_4868BAMB_4868BAMB_4868BAMB_4868
ASP1667 ARTH_0134ARTH_0134ARTH_0134ARTH_0134
ASAL382245 ASA_0817ASA_0817ASA_0817
ANAE240017 ANA_2770ANA_2770ANA_2770
AHYD196024 AHA_3132AHA_3500AHA_3500AHA_3132
AAUR290340 AAUR_0097AAUR_0097AAUR_0097AAUR_0097


Organism features enriched in list (features available for 210 out of the 224 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 9.390e-61517
Arrangment:Pairs 6.645e-967112
Disease:Botulism 0.005880255
Disease:Bubonic_plague 0.002085566
Disease:Dysentery 0.002085566
Disease:Gastroenteritis 0.00251491013
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00001121111
Disease:Tularemia 0.005880255
Endospores:Yes 2.356e-63553
Genome_Size_Range5:0-2 9.650e-1716155
Genome_Size_Range5:4-6 3.429e-10100184
Genome_Size_Range9:1-2 2.281e-1116128
Genome_Size_Range9:4-5 0.00080814896
Genome_Size_Range9:5-6 9.966e-75288
Gram_Stain:Gram_Pos 1.453e-678150
Habitat:Aquatic 0.00034581991
Habitat:Multiple 4.072e-688178
Habitat:Specialized 0.0000198653
Habitat:Terrestrial 0.00557181831
Motility:Yes 0.0000141120267
Optimal_temp.:20-30 0.009437367
Optimal_temp.:28-30 0.009437367
Optimal_temp.:30-37 2.233e-71718
Oxygen_Req:Anaerobic 1.728e-617102
Oxygen_Req:Facultative 2.326e-12111201
Pathogenic_in:Animal 3.004e-64166
Pathogenic_in:Human 4.850e-9109213
Pathogenic_in:No 3.696e-1440226
Shape:Rod 2.277e-10160347
Shape:Sphere 0.0019579119
Temp._range:Mesophilic 1.104e-7193473
Temp._range:Thermophilic 0.0006538435



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 392
Effective number of orgs (counting one per cluster within 468 clusters): 334

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79011
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-400
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H160
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30000
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU220664 ncbi Pseudomonas fluorescens Pf-50
PFLU216595 ncbi Pseudomonas fluorescens SBW250
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO10
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM181
NMEN122587 ncbi Neisseria meningitidis Z24911
NMEN122586 ncbi Neisseria meningitidis MC581
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GMET269799 ncbi Geobacter metallireducens GS-150
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6877   G6378   EG12469   EG12232   
XAUT78245
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629 TERTU_2100
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063
STHE292459
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMEL266834
SMED366394
SMAR399550
SLAC55218
SGOR29390
SGLO343509
SFUM335543
SELO269084
SDEG203122
SARE391037
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSOL267608
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RLEG216596
RFER338969
RFEL315456
REUT381666
REUT264198
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSYR223283
PSYR205918
PSTU379731
PSP312153
PSP296591
PSP117
PRUM264731
PPUT76869
PPUT351746
PPUT160488
PNAP365044
PMUL272843
PMOB403833
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PING357804
PHOR70601
PGIN242619
PFUR186497
PFLU220664
PFLU216595
PFLU205922
PENT384676
PDIS435591
PCAR338963
PAST100379
PARS340102
PARC259536
PAER208964
PAER208963
PAER178306
PABY272844
OIHE221109
OCAR504832
OANT439375
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833 NMCC_2095
NMEN272831 NMC2114
NMEN122587 NMA0222
NMEN122586 NMB_2136
NEUT335283
NEUR228410
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP409
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108
MLOT266835
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LREU557436 LREU_0277
LMES203120
LHEL405566
LDEL390333
LDEL321956
LCHO395495
KRAD266940
JSP375286
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HCHE349521
HBUT415426
HAUR316274
HARS204773
HACI382638
GURA351605
GSUL243231
GMET269799
FSUC59374
FSP1855
FSP106370
FNUC190304
FNOD381764
FMAG334413
FALN326424
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP501479
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ354242
CJEJ192222
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBOT508765
CBLO291272
CBLO203907
CABO218497
BTUR314724
BTRI382640
BSUI470137
BSUI204722
BSP376
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BLON206672
BJAP224911
BHER314723
BHEN283166
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BAPH372461
BAPH198804
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
APLE434271
APLE416269
APHA212042
APER272557
AORE350688
AMET293826
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669
AAVE397945
AAEO224324


Organism features enriched in list (features available for 366 out of the 392 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0000150217
Arrangment:Pairs 3.370e-943112
Disease:Gastroenteritis 0.0033210313
Disease:Wide_range_of_infections 0.00563981111
Endospores:Yes 5.801e-61853
Genome_Size_Range5:0-2 1.851e-15136155
Genome_Size_Range5:4-6 5.310e-1082184
Genome_Size_Range9:0-1 2.396e-62727
Genome_Size_Range9:1-2 3.532e-10109128
Genome_Size_Range9:4-5 0.00046314696
Genome_Size_Range9:5-6 3.417e-63688
Gram_Stain:Gram_Pos 5.406e-769150
Habitat:Aquatic 0.00014577291
Habitat:Multiple 5.061e-688178
Habitat:Specialized 9.346e-64753
Habitat:Terrestrial 0.00308621231
Motility:Yes 0.0000182144267
Optimal_temp.:25-35 0.0074023414
Optimal_temp.:30-37 3.911e-7118
Oxygen_Req:Anaerobic 4.963e-785102
Oxygen_Req:Facultative 4.051e-1386201
Pathogenic_in:Animal 8.161e-62566
Pathogenic_in:Human 2.733e-8103213
Pathogenic_in:No 1.361e-12181226
Shape:Irregular_coccus 0.00031711717
Shape:Rod 1.204e-10182347
Shape:Sphere 0.00142691819
Temp._range:Hyperthermophilic 0.00001712323
Temp._range:Mesophilic 2.597e-8273473
Temp._range:Thermophilic 0.00040433135



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
OTSU357244 ncbi Orientia tsutsugamushi Boryong 0.00423542744


Names of the homologs of the genes in the group in each of these orgs
  G6877   G6378   EG12469   EG12232   
OTSU357244 OTBS_0662OTBS_0662OTBS_0662OTBS_0662


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Scrub_typhus 0.001715311



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
THREONINE-DEG2-PWY (threonine degradation II)2141420.4582
RIBOKIN-PWY (ribose degradation)2791670.4486
SERDEG-PWY (L-serine degradation)3491900.4348
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121940.4269
GLUTAMINDEG-PWY (glutamine degradation I)1911270.4231
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3561900.4191



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6378   EG12469   EG12232   
G68770.9998250.9998310.999878
G63780.9999050.999818
EG124690.999833
EG12232



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PAIRWISE BLAST SCORES:

  G6877   G6378   EG12469   EG12232   
G68770.0f01.1e-492.6e-500
G63784.9e-490.0f005.1e-47
EG124694.4e-4800.0f01.2e-40
EG1223205.1e-471.6e-430.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6877 (centered at G6877)
G6378 (centered at G6378)
EG12469 (centered at EG12469)
EG12232 (centered at EG12232)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6877   G6378   EG12469   EG12232   
206/623235/623231/623216/623
AAUR290340:2:Tyes0000
AHYD196024:0:Tyes03423420
ANAE240017:0:Tyes00-0
ASAL382245:5:Tyes-000
ASP1667:3:Tyes0000
BAMB339670:2:Tno0000
BAMB398577:2:Tno0000
BAMY326423:0:Tyes0000
BANT260799:0:Tno0000
BANT261594:2:Tno0000
BANT568206:2:Tyes0000
BANT592021:2:Tno0000
BBAC264462:0:Tyes-00-
BCEN331271:1:Tno0000
BCEN331272:2:Tyes0000
BCER226900:1:Tyes656500
BCER288681:0:Tno767600
BCER315749:1:Tyes0000
BCER405917:1:Tyes7373073
BCER572264:1:Tno777700
BLIC279010:0:Tyes0000
BMAL243160:0:Tno0000
BMAL320388:0:Tno0000
BMAL320389:0:Tyes0000
BPSE272560:0:Tyes0000
BPSE320372:0:Tno0000
BPSE320373:0:Tno0000
BPUM315750:0:Tyes0000
BSP36773:1:Tyes0000
BSUB:0:Tyes0000
BTHA271848:0:Tno0000
BTHE226186:0:Tyes0000
BTHU281309:1:Tno747400
BTHU412694:1:Tno737300
BVIE269482:6:Tyes0000
BWEI315730:4:Tyes757500
BXEN266265:1:Tyes0000
CACE272562:1:Tyes-000
CAULO:0:Tyes-000
CBEI290402:0:Tyes000-
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