CANDIDATE ID: 298

CANDIDATE ID: 298

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9964500e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7705 (gspF) (b3327)
   Products of gene:
     - G7705-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7539 (pppA) (b2972)
   Products of gene:
     - G7539-MONOMER (prepilin peptidase)

- EG12106 (hofB) (b0107)
   Products of gene:
     - EG12106-MONOMER (protein involved in plasmid replication)

- EG11798 (hofC) (b0106)
   Products of gene:
     - EG11798-MONOMER (protein transport protein HofC)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 237
Effective number of orgs (counting one per cluster within 468 clusters): 170

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A4
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110184
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103314
XFAS405440 ncbi Xylella fastidiosa M124
XFAS183190 ncbi Xylella fastidiosa Temecula14
XFAS160492 ncbi Xylella fastidiosa 9a5c4
XCAM487884 Xanthomonas campestris pv. paulliniae4
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-104
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80044
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339134
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3064
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TTHE300852 ncbi Thermus thermophilus HB83
TTHE262724 ncbi Thermus thermophilus HB273
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB44
TSP1755 Thermoanaerobacter sp.4
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332234
TLET416591 ncbi Thermotoga lettingae TMO3
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen3
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT23
SSP94122 ncbi Shewanella sp. ANA-34
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab4
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4763
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B673
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91503
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT183
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty23
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1973
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SALA317655 ncbi Sphingopyxis alaskensis RB22564
SACI56780 ncbi Syntrophus aciditrophicus SB4
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99413
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RMET266264 ncbi Ralstonia metallidurans CH344
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RALB246199 Ruminococcus albus 83
PTHE370438 ncbi Pelotomaculum thermopropionicum SI4
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.4
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-13
PPUT351746 ncbi Pseudomonas putida F13
PPUT160488 ncbi Pseudomonas putida KT24403
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMEN399739 ncbi Pseudomonas mendocina ymp4
PMAR74546 ncbi Prochlorococcus marinus MIT 93123
PMAR167546 ncbi Prochlorococcus marinus MIT 93013
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO13
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-44
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
NSP35761 Nocardioides sp.3
NSP103690 ncbi Nostoc sp. PCC 71203
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251964
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C913
NEUR228410 ncbi Nitrosomonas europaea ATCC 197183
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124444
MXAN246197 ncbi Myxococcus xanthus DK 16224
MTHE264732 ncbi Moorella thermoacetica ATCC 390734
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E3
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS104
MFLA265072 ncbi Methylobacillus flagellatus KT4
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
MAER449447 ncbi Microcystis aeruginosa NIES-8433
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LCHO395495 ncbi Leptothrix cholodnii SP-64
KRAD266940 ncbi Kineococcus radiotolerans SRS302164
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HNEP81032 Hyphomonas neptunium4
HMOD498761 ncbi Heliobacterium modesticaldum Ice14
HINF71421 ncbi Haemophilus influenzae Rd KW203
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP3
HHAL349124 ncbi Halorhodospira halophila SL14
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GVIO251221 ncbi Gloeobacter violaceus PCC 74214
GURA351605 ncbi Geobacter uraniireducens Rf44
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GMET269799 ncbi Geobacter metallireducens GS-154
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1984
FTUL393011 ncbi Francisella tularensis holarctica OSU184
FTUL351581 Francisella tularensis holarctica FSC2004
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S853
FRANT ncbi Francisella tularensis tularensis SCHU S44
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250174
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B13
ESP42895 Enterobacter sp.3
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9333
ECOL83334 Escherichia coli O157:H73
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough4
DSP255470 ncbi Dehalococcoides sp. CBDB13
DSP216389 ncbi Dehalococcoides sp. BAV13
DRED349161 ncbi Desulfotomaculum reducens MI-14
DRAD243230 ncbi Deinococcus radiodurans R13
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DNOD246195 ncbi Dichelobacter nodosus VCS1703A4
DGEO319795 ncbi Deinococcus geothermalis DSM 113003
DETH243164 ncbi Dehalococcoides ethenogenes 1953
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CSP78 Caulobacter sp.4
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CPER289380 ncbi Clostridium perfringens SM1013
CPER195103 ncbi Clostridium perfringens ATCC 131243
CPER195102 ncbi Clostridium perfringens 133
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10623
CNOV386415 ncbi Clostridium novyi NT3
CJAP155077 Cellvibrio japonicus4
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29014
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C4
CCUR360105 ncbi Campylobacter curvus 525.923
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80524
CAULO ncbi Caulobacter crescentus CB154
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHA271848 ncbi Burkholderia thailandensis E2644
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1004
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294133
ASP76114 ncbi Aromatoleum aromaticum EbN14
ASP62977 ncbi Acinetobacter sp. ADP14
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS424
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
AORE350688 ncbi Alkaliphilus oremlandii OhILAs4
AMET293826 ncbi Alkaliphilus metalliredigens QYMF4
AMAR329726 ncbi Acaryochloris marina MBIC110174
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACEL351607 ncbi Acidothermus cellulolyticus 11B4
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N3
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3454
AAVE397945 ncbi Acidovorax citrulli AAC00-14
AAEO224324 ncbi Aquifex aeolicus VF54


Names of the homologs of the genes in the group in each of these orgs
  G7705   G7539   EG12106   EG11798   
YPSE349747 YPSIP31758_0955YPSIP31758_0963YPSIP31758_3371YPSIP31758_3372
YPSE273123 YPTB3063YPTB3055YPTB0706YPTB0705
YPES386656 YPDSF_0696YPDSF_0703YPDSF_2928YPDSF_2927
YPES377628 YPN_3018YPN_3010YPN_0662YPN_0661
YPES360102 YPA_0455YPA_0463YPA_2928YPA_2929
YPES349746 YPANGOLA_A3267YPANGOLA_A3259YPANGOLA_A1042YPANGOLA_A1043
YPES214092 YPO3427YPO0806YPO3426YPO3427
YPES187410 Y3202Y3195Y0760Y0759
YENT393305 YE3567YE3574YE0689YE0688
XORY360094 XOOORF_4563XOOORF_1525XOOORF_0389XOOORF_1526
XORY342109 XOO0772XOO1466XOO4144XOO1467
XORY291331 XOO0848XOO1584XOO4400XOO1585
XFAS405440 XFASM12_2108XFASM12_2107XFASM12_2114XFASM12_2108
XFAS183190 PD_1923PD_1922PD_0732PD_1923
XFAS160492 XF2538XF2537XF1517XF2538
XCAM487884 XCC-B100_0774XCC-B100_1087XCC-B100_4291XCC-B100_1088
XCAM316273 XCAORF_3763XCAORF_3447XCAORF_0159XCAORF_3763
XCAM314565 XC_0741XC_1056XC_4179XC_1057
XCAM190485 XCC3423XCC3101XCC4088XCC3100
XAXO190486 XAC0697XAC3243XAC4212XAC3242
VVUL216895 VV1_0875VV1_1623VV1_1625VV1_1624
VVUL196600 VV0216VV2781VV2779VV2780
VPAR223926 VP0135VP2526VP2524VP2525
VFIS312309 VF2472VF2188VF2186VF2187
VEIS391735 VEIS_1631VEIS_3921VEIS_0688VEIS_0687
VCHO345073 VC0395_A2304VC0395_A2002VC0395_A2000VC0395_A2001
VCHO VC2731VC2426VC2424VC2425
TTUR377629 TERTU_0267TERTU_3036TERTU_0266TERTU_3035
TTHE300852 TTHA0794TTHA0269TTHA0794
TTHE262724 TT_C0440TT_C1716TT_C0440
TTEN273068 TTE1264TTE1266TTE1262TTE1264
TSP1755 TETH514_1506TETH514_1508TETH514_1504TETH514_1506
TPSE340099 TETH39_1069TETH39_1071TETH39_1067TETH39_1069
TLET416591 TLET_0504TLET_0007TLET_1052
TDEN292415 TBD_0753TBD_2368TBD_0752TBD_2369
TCRU317025 TCR_0252TCR_1391TCR_0251TCR_0252
SWOL335541 SWOL_0533SWOL_0538SWOL_0533
STYP99287 STM3442STM0143STM0142
SSP94122 SHEWANA3_0153SHEWANA3_0417SHEWANA3_0419SHEWANA3_0418
SSP321332 CYB_2141CYB_0909CYB_2141
SSP321327 CYA_1967CYA_1318CYA_1965CYA_1967
SSED425104 SSED_4356SSED_0423SSED_0425SSED_0424
SPRO399741 SPRO_4249SPRO_4241SPRO_0777SPRO_0776
SPEA398579 SPEA_0146SPEA_0411SPEA_0413SPEA_0412
SONE211586 SO_0168SO_0414SO_0416SO_0415
SLOI323850 SHEW_3617SHEW_3440SHEW_3438SHEW_3439
SHAL458817 SHAL_4172SHAL_0468SHAL_0470SHAL_0469
SFUM335543 SFUM_0118SFUM_0214SFUM_0117SFUM_0118
SENT454169 SEHA_C3746SEHA_C0157SEHA_C0156
SENT321314 SCH_3376SCH_0142SCH_0141
SENT295319 SPA3308SPA0147SPA0146
SENT220341 STY4356STY0165STY0164
SENT209261 T4063T0149T0148
SELO269084 SYC2024_DSYC2159_DSYC2024_D
SDYS300267 SDY_3095SDY_0137SDY_3095
SDEN318161 SDEN_0123SDEN_3391SDEN_3389SDEN_3390
SDEG203122 SDE_3578SDE_0861SDE_3579SDE_0862
SBAL402882 SHEW185_0151SHEW185_3944SHEW185_3942SHEW185_3943
SBAL399599 SBAL195_0155SBAL195_4062SBAL195_4060SBAL195_4061
SALA317655 SALA_0317SALA_0326SALA_0316SALA_0317
SACI56780 SYN_01550SYN_00575SYN_01549SYN_01550
RXYL266117 RXYL_1164RXYL_1154RXYL_1164
RSOL267608 RSC3116RSC2827RSC3115RSC3116
RMET266264 RMET_3394RMET_3110RMET_3393RMET_3109
RFER338969 RFER_0544RFER_2904RFER_2902RFER_2903
REUT381666 H16_A3545H16_A3257H16_A3544H16_A3256
REUT264198 REUT_A3231REUT_A2962REUT_A3230REUT_A2961
RALB246199 GRAORF_3445GRAORF_0943GRAORF_0944
PTHE370438 PTH_1147PTH_1144PTH_1145PTH_1136
PSYR223283 PSPTO_3316PSPTO_0924PSPTO_0926PSPTO_0925
PSYR205918 PSYR_3150PSYR_0796PSYR_0798PSYR_0797
PSTU379731 PST_0126PST_1057PST_1055PST_1056
PSP56811 PSYCPRWF_0150PSYCPRWF_0149PSYCPRWF_0151PSYCPRWF_0150
PSP296591 BPRO_1331BPRO_0843BPRO_0841BPRO_0842
PPUT76869 PPUTGB1_1045PPUTGB1_0678PPUTGB1_1045
PPUT351746 PPUT_1089PPUT_0673PPUT_0674
PPUT160488 PP_1048PP_0632PP_0633
PPRO298386 PBPRA3479PBPRA3203PBPRA3201PBPRA3202
PNAP365044 PNAP_0754PNAP_0768PNAP_0766PNAP_0767
PMEN399739 PMEN_2924PMEN_0773PMEN_0775PMEN_0774
PMAR74546 PMT9312_1187PMT9312_1186PMT9312_1187
PMAR167546 P9301ORF_0705P9301ORF_0704P9301ORF_0705
PLUM243265 PLU1733PLU3639PLU3640
PING357804 PING_0099PING_3325PING_0480PING_0481
PHAL326442 PSHAA0234PSHAA0380PSHAA0378PSHAA0381
PFLU220664 PFL_2758PFL_5289PFL_2757PFL_5288
PFLU216595 PFLU3230PFLU0790PFLU4080PFLU0791
PFLU205922 PFL_3173PFL_4822PFL_4820PFL_4821
PENT384676 PSEEN2334PSEEN4668PSEEN2333PSEEN4667
PCRY335284 PCRYO_0256PCRYO_0067PCRYO_0069PCRYO_0068
PCAR338963 PCAR_2147PCAR_2139PCAR_2149PCAR_2147
PATL342610 PATL_0233PATL_3342PATL_0232PATL_3343
PARC259536 PSYC_0063PSYC_0062PSYC_0064PSYC_0063
PAER208964 PA3102PA4528PA4526PA4527
PAER208963 PA14_24010PA14_58770PA14_58750PA14_58760
NSP35761 NOCA_1127NOCA_1136NOCA_1127
NSP103690 ALL2442ALR1315ALL2442
NOCE323261 NOC_2894NOC_0310NOC_2895NOC_0311
NMUL323848 NMUL_A1904NMUL_A2131NMUL_A1903NMUL_A1904
NMEN374833 NMCC_1810NMCC_1811NMCC_1814NMCC_1810
NMEN272831 NMC1838NMC1839NMC1844NMC1838
NMEN122587 NMA2155NMA2156NMA2159NMA2155
NMEN122586 NMB_0333NMB_0332NMB_0329NMB_0333
NGON242231 NGO1669NGO1670NGO1673NGO1669
NEUT335283 NEUT_1043NEUT_1044NEUT_1043
NEUR228410 NE0596NE0597NE0596
NARO279238 SARO_2651SARO_2305SARO_2652SARO_2651
MXAN246197 MXAN_2512MXAN_5779MXAN_5788MXAN_2512
MTHE264732 MOTH_1552MOTH_1550MOTH_1554MOTH_1552
MSUC221988 MS0360MS0363MS0361
MPET420662 MPE_A3138MPE_A0507MPE_A0509MPE_A0508
MMAR394221 MMAR10_0383MMAR10_0392MMAR10_0382MMAR10_0383
MFLA265072 MFLA_2142MFLA_2225MFLA_2141MFLA_2142
MCAP243233 MCA_1115MCA_2094MCA_2096MCA_2095
MAQU351348 MAQU_1350MAQU_2683MAQU_2648MAQU_2682
MAER449447 MAE_04110MAE_57525MAE_04110
LPNE400673 LPC_0779LPC_0943LPC_0941LPC_0942
LPNE297246 LPP1317LPP1481LPP1479LPP1480
LPNE297245 LPL1314LPL1502LPL1504LPL1503
LPNE272624 LPG1363LPG1524LPG1522LPG1523
LCHO395495 LCHO_3429LCHO_0548LCHO_0550LCHO_3098
KRAD266940 KRAD_3026KRAD_3020KRAD_1156KRAD_3026
KPNE272620 GKPORF_B4443GKPORF_B4434GKPORF_B4390GKPORF_B4389
JSP375286 MMA_2997MMA_2998MMA_2996MMA_2997
ILOI283942 IL2024IL0450IL2025IL2024
HNEP81032 HNE_1867HNE_2653HNE_1866HNE_1867
HMOD498761 HM1_0251HM1_0253HM1_0249HM1_0251
HINF71421 HI_0296HI_0298HI_0297
HINF374930 CGSHIEE_01575CGSHIEE_01565CGSHIEE_01570
HINF281310 NTHI0406NTHI0408NTHI0407
HHAL349124 HHAL_2371HHAL_2022HHAL_2020HHAL_2371
HCHE349521 HCH_03936HCH_05280HCH_05278HCH_05279
HARS204773 HEAR1952HEAR2791HEAR0759HEAR2790
GVIO251221 GLL2665GLR2433GLL0921GLL2665
GURA351605 GURA_0681GURA_1800GURA_2682GURA_2680
GTHE420246 GTNG_2557GTNG_2555GTNG_2559GTNG_2557
GSUL243231 GSU_0327GSU_2043GSU_1491GSU_1493
GMET269799 GMET_3366GMET_0959GMET_1393GMET_1395
GKAU235909 GK2627GK2625GK2629GK2627
GBET391165 GBCGDNIH1_1757GBCGDNIH1_1690GBCGDNIH1_1756
FTUL458234 FTA_0876FTA_1010FTA_0877FTA_0876
FTUL418136 FTW_1167FTW_1045FTW_1166FTW_1167
FTUL401614 FTN_1116FTN_1000FTN_1115FTN_1116
FTUL393115 FTF1134FTF0683CFTF1133FTF1134
FTUL393011 FTH_0817FTH_0937FTH_0818FTH_0817
FTUL351581 FTL_0827FTL_0959FTL_0828FTL_0827
FSUC59374 FSU1504FSU2552FSU1504
FRANT PILCPILDPILBPILC
FPHI484022 FPHI_0118FPHI_1587FPHI_0117FPHI_0118
FNOD381764 FNOD_1271FNOD_1009FNOD_0138
ESP42895 ENT638_0650ENT638_0651ENT638_0650
EFER585054 EFER_2917EFER_2912EFER_0127EFER_0126
ECOO157 HOPDHOFBHOFC
ECOL83334 ECS4188ECS0111ECS0110
ECOL585397 ECED1_3992ECED1_3615ECED1_0105ECED1_0104
ECOL585057 ECIAI39_3454ECIAI39_3459ECIAI39_0107ECIAI39_0106
ECOL585056 ECUMN_3442ECUMN_3447ECUMN_0104ECUMN_0103
ECOL585055 EC55989_3376EC55989_3381EC55989_0100EC55989_0099
ECOL585035 ECS88_3715ECS88_3347ECS88_0109ECS88_0108
ECOL585034 ECIAI1_3108ECIAI1_3113ECIAI1_0104ECIAI1_0103
ECOL481805 ECOLC_0386ECOLC_0378ECOLC_3552ECOLC_3553
ECOL469008 ECBD_0424ECBD_0766ECBD_3512ECBD_3513
ECOL439855 ECSMS35_3245ECSMS35_3250ECSMS35_0110ECSMS35_0109
ECOL413997 ECB_03178ECB_02841ECB_00106ECB_00105
ECOL409438 ECSE_3243ECSE_3248ECSE_0107ECSE_0106
ECOL405955 APECO1_3125APECO1_3455APECO1_1882APECO1_1883
ECOL364106 UTI89_C3782UTI89_C3388UTI89_C0114UTI89_C0113
ECOL362663 ECP_3415ECP_3049ECP_0107ECP_0106
ECOL331111 ECE24377A_3425ECE24377A_3430ECE24377A_0109ECE24377A_3425
ECOL316407 ECK3314:JW3289:B3327ECK2967:JW2939:B2972ECK0106:JW0103:B0107ECK0105:JW0102:B0106
ECOL199310 C4098C4106C0126C0125
ECAR218491 ECA3107ECA3098ECA3799ECA3800
DVUL882 DVU_1271DVU_1263DVU_1272DVU_1271
DSP255470 CBDBA1303CBDBA1313CBDBA1303
DSP216389 DEHABAV1_1164DEHABAV1_1173DEHABAV1_1164
DRED349161 DRED_1036DRED_1047DRED_1034DRED_1036
DRAD243230 DR_1863DR_2065DR_1863
DPSY177439 DP2782DP3017DP2226DP2782
DOLE96561 DOLE_1045DOLE_1855DOLE_2849
DNOD246195 DNO_1125DNO_1124DNO_1126DNO_1125
DGEO319795 DGEO_0757DGEO_0374DGEO_0757
DETH243164 DET_1352DET_1362DET_1352
DARO159087 DARO_0880DARO_0637DARO_0879DARO_0638
CVIO243365 CV_3812CV_3826CV_3813CV_3827
CSP78 CAUL_2090CAUL_2122CAUL_2089CAUL_2090
CSAL290398 CSAL_2175CSAL_2176CSAL_2174CSAL_2175
CPSY167879 CPS_4589CPS_4449CPS_4447CPS_4448
CPER289380 CPR_2271CPR_2273CPR_2272
CPER195103 CPF_2569CPF_2571CPF_2570
CPER195102 CPE2285CPE2287CPE2286
CPEL335992 SAR11_0058SAR11_0065SAR11_0058
CNOV386415 NT01CX_1595NT01CX_1602NT01CX_1594
CJAP155077 CJA_3330CJA_2732CJA_3331CJA_2731
CHYD246194 CHY_0632CHY_0634CHY_0630CHY_0632
CDES477974 DAUD_0970DAUD_0967DAUD_0968DAUD_0970
CCUR360105 CCV52592_1963CCV52592_1264CCV52592_1964
CBUR434922 COXBU7E912_1953COXBU7E912_1951COXBU7E912_1952
CBUR360115 COXBURSA331_A0245COXBURSA331_A0247COXBURSA331_A0246
CBUR227377 CBU_0153CBU_0155CBU_0154
CBOT508765 CLL_A3301CLL_A3303CLL_A3302CLL_A3301
CBEI290402 CBEI_4217CBEI_4219CBEI_4218CBEI_4217
CAULO CC0175CC0184CC0174CC0175
BVIE269482 BCEP1808_0068BCEP1808_0551BCEP1808_0069BCEP1808_5248
BTHA271848 BTH_I0009BTH_I1134BTH_I0008BTH_I0009
BSP376 BRADO6347BRADO6338BRADO6348
BSP36773 BCEP18194_B1071BCEP18194_A3661BCEP18194_A3243BCEP18194_B1071
BPSE320373 BURPS668_0009BURPS668_3508BURPS668_0008BURPS668_0009
BPSE320372 BURPS1710B_A0234BURPS1710B_A3811BURPS1710B_A0233BURPS1710B_A0234
BPSE272560 BPSL0009BPSL3010BPSL0008BPSL0009
BPET94624 BPET2866BPET0532BPET2864
BMAL320389 BMA10247_2664BMA10247_3249BMA10247_2663BMA10247_2664
BMAL320388 BMASAVP1_A3516BMASAVP1_A0455BMASAVP1_A3517BMASAVP1_A3516
BMAL243160 BMA_2784BMA_2533BMA_2785BMA_2784
BCEN331272 BCEN2424_0060BCEN2424_0576BCEN2424_0061BCEN2424_0060
BCEN331271 BCEN_0010BCEN_0094BCEN_0009BCEN_0010
BBAC264462 BD1595BD0862BD1509BD1595
BAMB398577 BAMMC406_0060BAMMC406_0504BAMMC406_0061BAMMC406_0060
BAMB339670 BAMB_0050BAMB_0479BAMB_0051BAMB_0050
AVAR240292 AVA_0374AVA_2985AVA_0374
ASP76114 EBA4913EBA4343EBA1622EBA1619
ASP62977 ACIAD0411ACIAD0360ACIAD0362ACIAD0361
ASP62928 AZO3235AZO3236AZO3234AZO3235
ASP232721 AJS_0663AJS_0803AJS_0666AJS_0804
ASAL382245 ASA_3777ASA_0411ASA_0413ASA_3777
AORE350688 CLOS_1636CLOS_1634CLOS_1638CLOS_1636
AMET293826 AMET_3480AMET_3475AMET_3482AMET_3480
AMAR329726 AM1_0417AM1_2419AM1_2467AM1_0417
AHYD196024 AHA_0571AHA_3871AHA_3869AHA_3870
AFER243159 AFE_2075AFE_2840AFE_2843AFE_2075
AEHR187272 MLG_2392MLG_2081MLG_2079MLG_2080
ADEH290397 ADEH_0684ADEH_0637ADEH_0685ADEH_0624
ACEL351607 ACEL_1320ACEL_1314ACEL_1823ACEL_1320
ABOR393595 ABO_1313ABO_0612ABO_0614ABO_0613
ABAU360910 BAV0332BAV0331BAV0332
ABAC204669 ACID345_1390ACID345_1591ACID345_1392ACID345_1390
AAVE397945 AAVE_3974AAVE_3682AAVE_3680AAVE_3681
AAEO224324 AQ_747AQ_1601AQ_1971AQ_747


Organism features enriched in list (features available for 222 out of the 237 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.600e-71492
Arrangment:Clusters 0.0027312117
Disease:Bubonic_plague 0.002922366
Disease:Gastroenteritis 0.00006331213
Disease:Tularemia 0.007783955
Endospores:No 2.702e-1144211
GC_Content_Range4:0-40 2.608e-2031213
GC_Content_Range4:40-60 8.133e-11122224
GC_Content_Range4:60-100 0.003383768145
GC_Content_Range7:0-30 0.0002231747
GC_Content_Range7:30-40 7.196e-1524166
GC_Content_Range7:50-60 2.206e-968107
GC_Content_Range7:60-70 0.001551065134
Genome_Size_Range5:0-2 1.712e-1520155
Genome_Size_Range5:4-6 2.592e-8100184
Genome_Size_Range5:6-10 0.00242022747
Genome_Size_Range9:1-2 4.094e-1020128
Genome_Size_Range9:3-4 0.00951463877
Genome_Size_Range9:4-5 0.00305264896
Genome_Size_Range9:5-6 7.819e-65288
Genome_Size_Range9:6-8 0.00074462438
Gram_Stain:Gram_Neg 6.730e-19177333
Gram_Stain:Gram_Pos 1.082e-1321150
Habitat:Aquatic 0.00151974791
Habitat:Host-associated 7.939e-752206
Habitat:Multiple 0.003779681178
Motility:No 5.289e-733151
Motility:Yes 9.484e-8132267
Optimal_temp.:- 0.0001763118257
Optimal_temp.:25-35 0.0098649114
Optimal_temp.:30-37 0.0017627118
Optimal_temp.:37 0.000222725106
Pathogenic_in:Plant 0.00449071115
Shape:Coccus 0.00002041582
Shape:Rod 1.340e-9166347
Shape:Spiral 0.0004172434
Temp._range:Psychrophilic 0.000152099



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 358
Effective number of orgs (counting one per cluster within 468 clusters): 276

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP644076 Silicibacter sp. TrichCH4B0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96050
SSON300269 ncbi Shigella sonnei Ss0461
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1591
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHIGELLA ncbi Shigella flexneri 2a str. 2457T1
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111701
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP400668 ncbi Marinomonas sp. MWYL11
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM1
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E881
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1681
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7705   G7539   EG12106   EG11798   
ZMOB264203
XAUT78245 XAUT_2108
WSUC273121 WS0674
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_1138
TROS309801 TRD_A0872
TPET390874 TPET_0992
TPEN368408
TPAL243276
TMAR243274 TM_1696
TKOD69014
TFUS269800
TDEN326298 TMDEN_0996
TDEN243275
TACI273075
STRO369723 STROP_4495
STOK273063
STHE322159
STHE299768 STR0722
STHE292459
STHE264199 STU0722
SSUI391296 SSU98_1682
SSUI391295 SSU05_1671
SSP644076
SSP292414
SSP1148 SLR1120
SSP1131
SSON300269 SSO_0114
SSOL273057
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007 SMU_539C
SMEL266834
SMED366394
SMAR399550
SLAC55218
SHIGELLA HOFC
SHAE279808
SGOR29390
SGLO343509 SG0462
SERY405948 SACE_2064
SEPI176280
SEPI176279
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435
SAGA205921
SACI330779
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808 ROSERS_1565
RSP101510
RSAL288705
RRUB269796 RRU_A0108
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316055 RPE_2663
RPAL258594
RMAS416276
RLEG216596
RFEL315456
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PSP312153 PNUC_0184
PRUM264731
PPEN278197
PMOB403833
PMAR93060
PMAR59920
PMAR167555
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225 PLUT_0792
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109 OB0617
OCAR504832
OANT439375
NWIN323098
NSEN222891
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSP400668 MMWYL1_2315
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108
MLOT266835 MLR6821
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MEXT419610
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177 BSPH_1682
LSAK314315 LSA1771
LREU557436 LREU_1489
LPLA220668 LP_1023
LMON265669
LMON169963
LMES203120
LLAC272623 L0332
LLAC272622
LJOH257314
LINT363253
LINN272626
LHEL405566 LHV_0307
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621 LBA0286
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400 HSM_0756
HSOM205914 HS_0458
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HDUC233412
HBUT415426
HAUR316274
HACI382638
GOXY290633
GFOR411154
FSP1855
FSP106370
FNUC190304
FMAG334413
FJOH376686
FALN326424
ERUM302409
ERUM254945
ELIT314225
EFAE226185 EF_3236
ECHA205920
ECAN269484
DSHI398580
DDES207559
CVES412965
CTRA471473 CTLON_0828
CTRA471472 CTL0834
CTET212717 CTC_02411
CTEP194439
CSUL444179
CSP501479
CRUT413404
CPNE182082 CPB0845
CPNE138677 CPJ0816
CPNE115713 CPN0816
CPNE115711 CP_1055
CPHY357809 CPHY_2819
CMUR243161 TC_0860
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1111
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHUT269798
CGLU196627
CFEL264202 CF0067
CEFF196164
CDIP257309
CCHL340177
CCAV227941 CCA_00947
CBOT536232 CLM_1491
CBOT515621 CLJ_B1429
CBOT498213 CLD_3243
CBOT441772 CLI_1409
CBOT441771 CLC_1353
CBOT441770 CLB_1343
CBOT36826 CBO1316
CBLO291272
CBLO203907
CACE272562 CAC2784
CABO218497 CAB916
BXEN266265
BWEI315730 BCERKBAB4_1221
BTUR314724
BTRI382640
BTHU412694 BALH_1168
BTHU281309 BT9727_1197
BTHE226186
BSUI470137
BSUI204722
BSUB BSU28070
BSP107806
BQUI283165
BPUM315750 BPUM_2447
BPER257313 BP3818
BPAR257311 BPP3962
BOVI236
BMEL359391
BMEL224914
BLON206672
BLIC279010 BL00633
BJAP224911
BHER314723
BHEN283166
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264 BCA_1357
BCER405917 BCE_1419
BCER315749 BCER98_1027
BCER288681 BCE33L1199
BCER226900 BC_1306
BCAN483179
BBUR224326
BBRO257310 BB0792
BBAC360095
BAPH372461
BAPH198804
BANT592021 BAA_1385
BANT568206 BAMEG_3279
BANT261594 GBAA1318
BANT260799 BAS1219
BAMY326423 RBAM_025120
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP1667
APLE434271 APJL_0891
APLE416269 APL_0879
APHA212042
APER272557
ANAE240017
AMAR234826
ALAI441768
AFUL224325
ACAU438753
ABUT367737
AAUR290340


Organism features enriched in list (features available for 334 out of the 358 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.729e-77492
Arrangment:Clusters 0.00085901617
Arrangment:Singles 0.0066215151286
Disease:Food_poisoning 0.006345199
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00203141111
Disease:Wide_range_of_infections 0.00203141111
Endospores:No 3.113e-11158211
GC_Content_Range4:0-40 2.002e-18171213
GC_Content_Range4:40-60 7.554e-1289224
GC_Content_Range7:0-30 0.00007633947
GC_Content_Range7:30-40 1.398e-12132166
GC_Content_Range7:50-60 4.329e-1131107
GC_Content_Range7:60-70 0.008096766134
Genome_Size_Range5:0-2 1.074e-17132155
Genome_Size_Range5:4-6 8.756e-974184
Genome_Size_Range5:6-10 0.00657331947
Genome_Size_Range9:0-1 1.839e-72727
Genome_Size_Range9:1-2 2.256e-11105128
Genome_Size_Range9:3-4 0.00448353477
Genome_Size_Range9:4-5 0.00031404096
Genome_Size_Range9:5-6 0.00006493488
Genome_Size_Range9:6-8 0.00175051338
Gram_Stain:Gram_Neg 1.456e-20137333
Gram_Stain:Gram_Pos 3.201e-17128150
Habitat:Aquatic 0.00191634091
Habitat:Host-associated 0.0000193141206
Motility:No 4.625e-8114151
Motility:Yes 2.003e-9118267
Optimal_temp.:- 0.0000316124257
Optimal_temp.:25-35 0.00395621314
Optimal_temp.:30-37 0.00051101718
Optimal_temp.:37 0.001284874106
Pathogenic_in:Animal 0.00723242966
Pathogenic_in:Human 0.0079498134213
Shape:Coccus 4.585e-66582
Shape:Irregular_coccus 0.00534261517
Shape:Rod 2.234e-8167347
Shape:Sphere 0.00937911619
Temp._range:Hyperthermophilic 0.00670881923



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181620.5481
AST-PWY (arginine degradation II (AST pathway))1201110.5479
GLYCOCAT-PWY (glycogen degradation I)2461690.5101
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001870.4822
PWY-4041 (γ-glutamyl cycle)2791770.4712
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951400.4693
PWY-5918 (heme biosynthesis I)2721730.4635
PWY-5386 (methylglyoxal degradation I)3051860.4628
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482010.4569
PWY-1269 (CMP-KDO biosynthesis I)3251920.4525
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391960.4450
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861750.4392
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982150.4377
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551620.4370
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251490.4364
TYRFUMCAT-PWY (tyrosine degradation I)1841300.4349
PWY-5913 (TCA cycle variation IV)3011800.4333
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911330.4327
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911750.4261
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961760.4197
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901730.4155
PROSYN-PWY (proline biosynthesis I)4752330.4063
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761220.4042



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7539   EG12106   EG11798   
G77050.9993440.999630.999708
G75390.99960.999779
EG121060.999809
EG11798



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PAIRWISE BLAST SCORES:

  G7705   G7539   EG12106   EG11798   
G77050.0f0---
G7539-0.0f0--
EG12106--0.0f0-
EG11798---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11798 EG12106 (centered at EG12106)
G7539 (centered at G7539)
G7705 (centered at G7705)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7705   G7539   EG12106   EG11798   
237/623317/623237/623238/623
AAEO224324:0:Tyes06018690
AAVE397945:0:Tyes289201
ABAC204669:0:Tyes020120
ABAU360910:0:Tyes10-1
ABOR393595:0:Tyes719021
ACEL351607:0:Tyes605096
ACRY349163:8:Tyes02--
ADEH290397:0:Tyes6013610
AEHR187272:0:Tyes311201
AFER243159:0:Tyes07547570
AHYD196024:0:Tyes0318231803181
AMAR329726:9:Tyes0197620240
AMET293826:0:Tyes5075
AORE350688:0:Tyes2042
APLE416269:0:Tyes--0-
APLE434271:0:Tno--0-
ASAL382245:5:Tyes3243013243
ASP232721:2:Tyes01403141
ASP62928:0:Tyes1201
ASP62977:0:Tyes47021
ASP76114:2:Tyes1946159910
AVAR240292:3:Tyes02622-0
BAMB339670:3:Tno045010
BAMB398577:3:Tno045610
BAMY326423:0:Tyes-0--
BANT260799:0:Tno-0--
BANT261594:2:Tno-0--
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