CANDIDATE ID: 301

CANDIDATE ID: 301

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9941183e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   2.8000000e-41

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG12291 (yiaW) (b3587)
   Products of gene:
     - EG12291-MONOMER (conserved inner membrane protein)

- EG12290 (yiaV) (b3586)
   Products of gene:
     - EG12290-MONOMER (predicted membrane fusion protein (MFP) component of efflux pump, signal anchor)

- EG11765 (yibI) (b3598)
   Products of gene:
     - EG11765-MONOMER (predicted inner membrane protein)

- EG11764 (yibH) (b3597)
   Products of gene:
     - EG11764-MONOMER (putative membrane protein)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 54
Effective number of orgs (counting one per cluster within 468 clusters): 31

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
SSP94122 ncbi Shewanella sp. ANA-34
SSP387093 ncbi Sulfurovum sp. NBC37-14
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis4
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
RPAL316057 ncbi Rhodopseudomonas palustris BisB54
RMET266264 ncbi Ralstonia metallidurans CH344
REUT381666 ncbi Ralstonia eutropha H164
PSP117 Pirellula sp.4
PMEN399739 ncbi Pseudomonas mendocina ymp4
NHAM323097 ncbi Nitrobacter hamburgensis X144
MSP409 Methylobacterium sp.4
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
CPSY167879 ncbi Colwellia psychrerythraea 34H4
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
AHYD196024 Aeromonas hydrophila dhakensis4


Names of the homologs of the genes in the group in each of these orgs
  EG12291   EG12290   EG11765   EG11764   
XAUT78245 XAUT_3415XAUT_3414XAUT_3415XAUT_3414
VVUL216895 VV2_1536VV2_1535VV2_1536VV2_1535
VVUL196600 VVA0350VVA0349VVA0350VVA0349
VPAR223926 VPA1479VPA1480VPA1479VPA1480
VFIS312309 VFA0380VFA0379VFA0380VFA0379
VCHO345073 VC0395_0087VC0395_0088VC0395_0087VC0395_0088
VCHO VCA0048VCA0047VCA0048VCA0047
SSP94122 SHEWANA3_3194SHEWANA3_3193SHEWANA3_3194SHEWANA3_3193
SSP387093 SUN_1990SUN_1991SUN_1990SUN_1991
SSON300269 SSO_3810SSO_3812SSO_3810SSO_3812
SSED425104 SSED_0974SSED_0975SSED_0974SSED_0975
SPRO399741 SPRO_0114SPRO_0115SPRO_0114SPRO_0115
SPEA398579 SPEA_0872SPEA_0873SPEA_0872SPEA_0873
SLOI323850 SHEW_0889SHEW_0890SHEW_0889SHEW_0890
SLAC55218 SL1157_3163SL1157_3164SL1157_3163SL1157_3164
SHIGELLA YIBIYIBHYIBIYIBH
SHAL458817 SHAL_0925SHAL_0926SHAL_0925SHAL_0926
SFLE373384 SFV_3947SFV_3948SFV_3939SFV_3948
SFLE198214 AAN45079.1AAN45078.1AAN45079.1AAN45078.1
SBOY300268 SBO_3596SBO_3595SBO_3596SBO_3595
SBAL402882 SHEW185_1060SHEW185_1061SHEW185_1060SHEW185_1061
SBAL399599 SBAL195_1093SBAL195_1094SBAL195_1093SBAL195_1094
RPAL316057 RPD_2517RPD_2518RPD_2517RPD_2518
RMET266264 RMET_4621RMET_4620RMET_4621RMET_4620
REUT381666 H16_B1622H16_B1621H16_B1622H16_B1621
PSP117 RB9522RB9526RB9522RB9526
PMEN399739 PMEN_3251PMEN_3252PMEN_3251PMEN_3252
NHAM323097 NHAM_2978NHAM_2977NHAM_2978NHAM_2977
MSP409 M446_1211M446_1210M446_1211M446_1210
KPNE272620 GKPORF_B3303GKPORF_B3302GKPORF_B3303GKPORF_B3302
ESP42895 ENT638_0137ENT638_0138ENT638_0137ENT638_0138
EFER585054 EFER_3588EFER_3587EFER_3588EFER_3587
ECOO157 YIAWYIBHYIBIYIBH
ECOL83334 ECS4463ECS4473ECS4474ECS4473
ECOL585397 ECED1_4280ECED1_4279ECED1_4280ECED1_4279
ECOL585057 ECIAI39_4103ECIAI39_4112ECIAI39_4113ECIAI39_4112
ECOL585056 ECUMN_4109ECUMN_4108ECUMN_4109ECUMN_4108
ECOL585055 EC55989_4044EC55989_4061EC55989_4062EC55989_4061
ECOL585035 ECS88_4011ECS88_4010ECS88_4011ECS88_4010
ECOL585034 ECIAI1_3754ECIAI1_3767ECIAI1_3768ECIAI1_3767
ECOL481805 ECOLC_0126ECOLC_0127ECOLC_0114ECOLC_0127
ECOL469008 ECBD_0144ECBD_0145ECBD_0130ECBD_0145
ECOL439855 ECSMS35_3913ECSMS35_3930ECSMS35_3931ECSMS35_3930
ECOL413997 ECB_03442ECB_03452ECB_03453ECB_03452
ECOL409438 ECSE_3863ECSE_3875ECSE_3876ECSE_3875
ECOL405955 APECO1_2859APECO1_2860APECO1_2859APECO1_2860
ECOL364106 UTI89_C4136UTI89_C4135UTI89_C4136UTI89_C4135
ECOL362663 ECP_3696ECP_3695ECP_3696ECP_3695
ECOL331111 ECE24377A_4084ECE24377A_4095ECE24377A_4096ECE24377A_4095
ECOL316407 ECK3576:JW3559:B3587ECK3575:JW3558:B3586ECK3587:JW3572:B3598ECK3575:JW3558:B3586
ECOL199310 C4415C4414C4415C4414
CPSY167879 CPS_3030CPS_3029CPS_3030CPS_3029
ASAL382245 ASA_1690ASA_1689ASA_1690ASA_1689
AHYD196024 AHA_2621AHA_2622AHA_2621AHA_2622


Organism features enriched in list (features available for 48 out of the 54 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0017782192
Arrangment:Pairs 0.000348319112
Disease:Cholera 0.006648922
Disease:Dysentery 0.000017256
Disease:Gastroenteritis 0.0002328613
Disease:Urinary_tract_infection 0.001942334
Disease:primary_septicemia 0.006648922
Disease:wound_infections 0.006648922
GC_Content_Range4:0-40 4.879e-82213
GC_Content_Range4:40-60 3.129e-1140224
GC_Content_Range7:30-40 0.00001022166
GC_Content_Range7:50-60 5.368e-1027107
Genome_Size_Range5:2-4 2.449e-81197
Genome_Size_Range5:4-6 3.270e-2145184
Genome_Size_Range9:2-3 0.00012731120
Genome_Size_Range9:4-5 0.00047241796
Genome_Size_Range9:5-6 2.552e-132888
Gram_Stain:Gram_Neg 1.843e-1147333
Motility:No 5.152e-61151
Motility:Yes 3.372e-941267
Optimal_temp.:10 0.006648922
Optimal_temp.:20-30 0.001127347
Oxygen_Req:Aerobic 1.306e-62185
Oxygen_Req:Facultative 7.033e-2146201
Pathogenic_in:No 0.007298711226
Shape:Rod 2.555e-946347



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 443
Effective number of orgs (counting one per cluster within 468 clusters): 347

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317581
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329531
YPES386656 ncbi Yersinia pestis Pestoides F1
YPES377628 ncbi Yersinia pestis Nepal5161
YPES360102 ncbi Yersinia pestis Antiqua1
YPES349746 ncbi Yersinia pestis Angola1
YPES214092 ncbi Yersinia pestis CO921
YPES187410 ncbi Yersinia pestis KIM 101
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80811
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT20
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4760
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B670
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91500
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT180
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty20
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDYS300267 ncbi Shigella dysenteriae Sd1971
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO10
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10431
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHA271848 ncbi Burkholderia thailandensis E2640
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG12291   EG12290   EG11765   EG11764   
ZMOB264203
YPSE349747 YPSIP31758_0535
YPSE273123 YPTB3436
YPES386656 YPDSF_0404
YPES377628 YPN_0482
YPES360102 YPA_3171
YPES349746 YPANGOLA_A1061
YPES214092 YPO0619
YPES187410 Y3558
YENT393305 YE3242
XFAS405440
XFAS183190
XFAS160492
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STYP99287
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SHAE279808
SGOR29390
SGLO343509
SFUM335543
SERY405948
SEPI176280
SEPI176279
SENT454169
SENT321314
SENT295319
SENT220341
SENT209261
SELO269084
SDYS300267 SDY_1867
SDEN318161
SDEG203122
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655 SALA_2082
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSP357808
RSP101510
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFER338969
RFEL315456
RCON272944
RCAS383372
RCAN293613 A1E_01400
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSP312153
PSP296591
PRUM264731
PPEN278197
PNAP365044
PMUL272843
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PLUM243265
PISL384616
PINT246198
PING357804
PHOR70601
PGIN242619
PFUR186497
PCAR338963
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NFAR247156
NEUT335283
NEUR228410
NARO279238 SARO_1715
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
JSP375286
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HAUR316274
HARS204773
HACI382638
GVIO251221
GTHE420246
GKAU235909
GFOR411154
FSUC59374
FSP1855
FSP106370
FNUC190304
FNOD381764
FMAG334413
FALN326424
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAR218491 ECA3512
ECAN269484
DVUL882
DSP255470
DSP216389
DRED349161
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087
CVIO243365
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_0646
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974
CCUR360105
CCON360104
CCAV227941
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402
CACE272562
CABO218497
BWEI315730
BTUR314724
BTHU412694
BTHU281309
BTHA271848
BSUB
BSP107806
BPUM315750
BPER257313
BPAR257311
BMEL359391 BAB2_0764
BLON206672
BLIC279010
BHER314723
BHAL272558
BGAR290434
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BBUR224326
BBRO257310
BBAC264462
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
BABO262698 BRUAB2_0750
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62928
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AFUL224325
AEHR187272
ACEL351607
ABUT367737
ABAU360910
ABAC204669 ACID345_3323
AAVE397945
AAUR290340
AAEO224324


Organism features enriched in list (features available for 419 out of the 443 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.428e-78592
Arrangment:Clusters 0.00331671717
Disease:Dysentery 0.007329216
Endospores:No 3.233e-7177211
Endospores:Yes 2.509e-65153
GC_Content_Range4:0-40 1.538e-17195213
GC_Content_Range4:40-60 0.0008166145224
GC_Content_Range4:60-100 3.335e-878145
GC_Content_Range7:0-30 8.334e-84747
GC_Content_Range7:30-40 4.087e-10148166
GC_Content_Range7:50-60 7.187e-658107
GC_Content_Range7:60-70 1.366e-968134
Genome_Size_Range5:0-2 1.766e-14145155
Genome_Size_Range5:2-4 0.0000477161197
Genome_Size_Range5:4-6 5.444e-1297184
Genome_Size_Range5:6-10 1.556e-81647
Genome_Size_Range9:0-1 0.00010482727
Genome_Size_Range9:1-2 2.589e-10118128
Genome_Size_Range9:2-3 0.0000345103120
Genome_Size_Range9:5-6 4.614e-123588
Genome_Size_Range9:6-8 1.750e-91038
Gram_Stain:Gram_Neg 1.204e-32180333
Gram_Stain:Gram_Pos 9.149e-23148150
Habitat:Multiple 0.0001528110178
Habitat:Specialized 0.00418614653
Motility:No 9.715e-9134151
Motility:Yes 6.505e-10159267
Optimal_temp.:- 0.0029708171257
Optimal_temp.:25-30 8.488e-10119
Optimal_temp.:30-37 0.00235561818
Oxygen_Req:Aerobic 0.0000400113185
Oxygen_Req:Anaerobic 3.506e-894102
Salinity:Non-halophilic 0.005699286106
Shape:Coccus 0.00004397382
Shape:Irregular_coccus 0.00331671717
Shape:Rod 4.473e-16208347
Shape:Sphere 0.00167191919
Shape:Spiral 0.00089693234
Temp._range:Hyperthermophilic 0.00042112323
Temp._range:Mesophilic 0.0007038327473
Temp._range:Psychrophilic 0.002416429
Temp._range:Thermophilic 0.00067063335



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
HEXITOLDEGSUPER-PWY (superpathway of hexitol degradation)37230.4777
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45250.4650
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50260.4549
PWY0-1277 (3-phenylpropionate and 3-(3-hydroxyphenyl)propionate degradation)19150.4430
FUC-RHAMCAT-PWY (superpathway of fucose and rhamnose degradation)19150.4430
SORBDEG-PWY (sorbitol degradation II)53260.4377
HCAMHPDEG-PWY (3-phenylpropionate and 3-(3-hydroxyphenyl)propionate degradation to 2-oxopent-4-enoate)22160.4356
PWY0-1355 (formate to trimethylamine N-oxide electron transfer)31190.4280
PWY-46 (putrescine biosynthesis III)138430.4264
GALACTITOLCAT-PWY (galactitol degradation)73300.4199
AST-PWY (arginine degradation II (AST pathway))120390.4137



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12290   EG11765   EG11764   
EG122910.9993130.9993150.999313
EG122900.9993220.999886
EG117650.999322
EG11764



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PAIRWISE BLAST SCORES:

  EG12291   EG12290   EG11765   EG11764   
EG122910.0f0-5.6e-41-
EG12290-0.0f0-0
EG117655.6e-41-0.0f0-
EG11764-0-0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11764 EG11765 (centered at EG11765)
EG12290 EG12291 (centered at EG12291)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12291   EG12290   EG11765   EG11764   
55/623193/62355/623185/623
ABAC204669:0:Tyes---0
ABOR393595:0:Tyes-0-0
ACAU438753:0:Tyes-0-0
ACRY349163:8:Tyes-0-0
ADEH290397:0:Tyes-0-0
AFER243159:0:Tyes-0-0
AHYD196024:0:Tyes0101
ASAL382245:5:Tyes1010
ASP232721:2:Tyes-0-0
ASP62977:0:Tyes-3085-0
BABO262698:0:Tno-0--
BAMB339670:1:Tno-0-0
BAMB398577:1:Tno-0-0
BBAC360095:0:Tyes-0-0
BCAN483179:1:Tno-0-0
BCEN331271:2:Tno-0-0
BCEN331272:1:Tyes-0-0
BFRA272559:1:Tyes-0-0
BFRA295405:0:Tno-0-0
BHEN283166:0:Tyes-0-0
BJAP224911:0:Fyes-0-0
BMAL243160:1:Tno-0-0
BMAL320388:1:Tno-0-0
BMAL320389:1:Tyes-0-0
BMEL224914:0:Tno-0-0
BMEL359391:0:Tno-0--
BOVI236:0:Tyes-249-0
BPET94624:0:Tyes-0-0
BPSE272560:1:Tyes-0-0
BPSE320372:1:Tno-0-0
BPSE320373:1:Tno-0-0
BQUI283165:0:Tyes-0-0
BSP36773:0:Tyes-0-0
BSP376:0:Tyes-0-0
BSUI204722:1:Tyes-0-0
BSUI470137:1:Tno-0-0
BTHE226186:0:Tyes-0-0
BTRI382640:1:Tyes-0-0
BVIE269482:5:Tyes-0-0
BXEN266265:1:Tyes-0-583
CAULO:0:Tyes-0-0
CBUR227377:1:Tyes-0-0
CBUR360115:1:Tno-0-0
CBUR434922:2:Tno-0-0
CCHL340177:0:Tyes-0-0
CKLU431943:1:Tyes---0
CPSY167879:0:Tyes1010
CSAL290398:0:Tyes-0-0
CSP501479:7:Fyes-0-0
CSP78:2:Tyes-0-0
DSHI398580:5:Tyes-0-0
ECAR218491:0:Tyes-0--
ECOL199310:0:Tno1010
ECOL316407:0:Tno1112012
ECOL331111:6:Tno0111211
ECOL362663:0:Tno1010
ECOL364106:1:Tno1010
ECOL405955:2:Tyes1010
ECOL409438:6:Tyes0121312
ECOL413997:0:Tno0101110
ECOL439855:4:Tno0171817
ECOL469008:0:Tno1314014
ECOL481805:0:Tno1213013
ECOL585034:0:Tno0111211
ECOL585035:0:Tno1010
ECOL585055:0:Tno0141514
ECOL585056:2:Tno1010
ECOL585057:0:Tno0787
ECOL585397:0:Tno1010
ECOL83334:0:Tno0101110
ECOLI:0:Tno101312
ECOO157:0:Tno0111211
EFER585054:1:Tyes1010
ELIT314225:0:Tyes-0-0
ESP42895:1:Tyes0101
FJOH376686:0:Tyes-0-0
FPHI484022:1:Tyes-0-0
FRANT:0:Tno-0-0
FTUL351581:0:Tno-0-0
FTUL393011:0:Tno-0-0
FTUL393115:0:Tyes-0-0
FTUL401614:0:Tyes-0-0
FTUL418136:0:Tno-0-0
FTUL458234:0:Tno-0-0
GBET391165:0:Tyes-0-0
GMET269799:1:Tyes-0-0
GOXY290633:5:Tyes-0-0
GSUL243231:0:Tyes-0-0
GURA351605:0:Tyes-0-0
HCHE349521:0:Tyes-0-0
ILOI283942:0:Tyes-0-0
KPNE272620:2:Tyes1010
LPNE272624:0:Tno-0-0
LPNE297245:1:Fno-0-0
LPNE297246:1:Fyes-0-0
LPNE400673:0:Tno-0-0
MCAP243233:0:Tyes-0-0
MEXT419610:0:Tyes-0-0
MLOT266835:2:Tyes-0-0
MMAG342108:0:Tyes-0-0
MSP266779:3:Tyes-0-0
MSP400668:0:Tyes-0-0
MSP409:2:Tyes1010
MTHE264732:0:Tyes-0-0
NARO279238:0:Tyes---0
NGON242231:0:Tyes-0-0
NHAM323097:2:Tyes1010
NMEN122586:0:Tno-0-0
NMEN122587:0:Tyes-0-0
NMEN272831:0:Tno-0-0
NMEN374833:0:Tno-0-0
OANT439375:4:Tyes-0-0
OCAR504832:0:Tyes-0-0
PAER208963:0:Tyes-0-0
PAER208964:0:Tno-0-0
PARC259536:0:Tyes-0-0
PATL342610:0:Tyes-0-0
PCRY335284:1:Tyes-0-0
PDIS435591:0:Tyes-0-0
PENT384676:0:Tyes-0-0
PFLU205922:0:Tyes-0-0
PFLU216595:1:Tyes-0-0
PFLU220664:0:Tyes-2353-0
PHAL326442:0:Tyes-0-0
PMEN399739:0:Tyes0101
PPRO298386:1:Tyes-0-0
PPUT160488:0:Tno-0-0
PPUT351746:0:Tyes-0-0
PPUT76869:0:Tno-0-0
PSP117:0:Tyes0101
PSP56811:2:Tyes-0-0
PSTU379731:0:Tyes-0-0
PSYR205918:0:Tyes-0-0
PSYR223283:2:Tyes-0-0
RCAN293613:0:Fyes-0--
RDEN375451:4:Tyes-0-0
RETL347834:4:Tyes-0-0
REUT264198:3:Tyes-0-0
REUT381666:1:Tyes1010
RLEG216596:6:Tyes-0-0
RMET266264:1:Tyes1010
RPAL258594:0:Tyes-0-3611
RPAL316055:0:Tyes-0-0
RPAL316056:0:Tyes-1687-0
RPAL316057:0:Tyes0101
RPAL316058:0:Tyes-0-0
RPOM246200:1:Tyes-0-0
RRUB269796:1:Tyes-0-0
RSOL267608:1:Tyes-0-0
RSPH272943:4:Tyes-0-0
RSPH349101:2:Tno-0-0
RSPH349102:5:Tyes-0-0
SALA317655:1:Tyes---0
SBAL399599:3:Tyes0101
SBAL402882:1:Tno0101
SBOY300268:1:Tyes1010
SDYS300267:1:Tyes---0
SFLE198214:0:Tyes1010
SFLE373384:0:Tno8909
SHAL458817:0:Tyes0101
SHIGELLA:0:Tno0101
SLAC55218:1:Fyes0101
SLOI323850:0:Tyes0101
SMED366394:1:Tyes-0-0
SMEL266834:0:Tyes-0-0
SONE211586:1:Tyes-0-0
SPEA398579:0:Tno0101
SPRO399741:1:Tyes0101
SSED425104:0:Tyes0101
SSON300269:1:Tyes0202
SSP387093:0:Tyes0101
SSP644076:3:Fyes-0-0
SSP94122:1:Tyes1010
TTUR377629:0:Tyes-0-0
VCHO:1:Fyes1010
VCHO345073:0:Tno0101
VFIS312309:1:Tyes1010
VPAR223926:0:Tyes0101
VVUL196600:1:Tyes1010
VVUL216895:0:Tno1010
XAUT78245:1:Tyes1010
XAXO190486:0:Tyes-0-1834
XCAM190485:0:Tyes-0-0
XCAM314565:0:Tno-0-0
XCAM316273:0:Tno-0-0
XCAM487884:0:Tno-0-0
XORY291331:0:Tno-0-0
XORY342109:0:Tyes-0-0
XORY360094:0:Tno-0-0
YENT393305:1:Tyes-0--
YPES187410:5:Tno-0--
YPES214092:3:Tno-0--
YPES349746:2:Tno-0--
YPES360102:3:Tyes-0--
YPES377628:2:Tno-0--
YPES386656:2:Tno-0--
YPSE273123:2:Tno-0--
YPSE349747:2:Tno-0--



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