CANDIDATE ID: 366

CANDIDATE ID: 366

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9956583e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6472 (ycaR) (b0917)
   Products of gene:
     - G6472-MONOMER (conserved protein)

- EG12375 (ycaI) (b0913)
   Products of gene:
     - EG12375-MONOMER (conserved inner membrane protein)

- EG11409 (lpxK) (b0915)
   Products of gene:
     - TETRAACYLDISACC4KIN-MONOMER (tetraacyldisaccharide 4'-kinase)
       Reactions:
        lipid A disaccharide + ATP  =  lipid IVA + ADP + 2 H+
         In pathways
         LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)
         KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)
         NAGLIPASYN-PWY (lipid IVA biosynthesis)

- EG10519 (kdsB) (b0918)
   Products of gene:
     - CPM-KDOSYNTH-MONOMER (3-deoxy-D-manno-octulosonate cytidylyltransferase)
       Reactions:
        3-deoxy-D-manno-octulosonate + CTP  ->  CMP-3-deoxy-D-manno-octulosonate + diphosphate
         In pathways
         LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)
         KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)
         PWY-5111 (PWY-5111)
         PWY-1269 (CMP-KDO biosynthesis I)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 249
Effective number of orgs (counting one per cluster within 468 clusters): 173

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 103
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py23
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106333
VFIS312309 ncbi Vibrio fischeri ES1144
VEIS391735 ncbi Verminephrobacter eiseniae EF01-24
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252594
TCRU317025 ncbi Thiomicrospira crunogena XCL-24
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4193
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T3
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans3
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3013
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B673
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91503
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SACI56780 ncbi Syntrophus aciditrophicus SB3
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170293
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.13
RSOL267608 ncbi Ralstonia solanacearum GMI10004
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RPAL316058 ncbi Rhodopseudomonas palustris HaA23
RPAL316057 ncbi Rhodopseudomonas palustris BisB53
RPAL316056 ncbi Rhodopseudomonas palustris BisB183
RPAL316055 ncbi Rhodopseudomonas palustris BisA533
RPAL258594 ncbi Rhodopseudomonas palustris CGA0093
RMET266264 ncbi Ralstonia metallidurans CH344
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38413
RFER338969 ncbi Rhodoferax ferrireducens T1184
REUT381666 ncbi Ralstonia eutropha H164
REUT264198 ncbi Ralstonia eutropha JMP1344
RETL347834 ncbi Rhizobium etli CFN 423
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-14
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ24
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L483
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OCAR504832 ncbi Oligotropha carboxidovorans OM53
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2553
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534424
NMEN272831 ncbi Neisseria meningitidis FAM184
NMEN122587 ncbi Neisseria meningitidis Z24914
NMEN122586 ncbi Neisseria meningitidis MC584
NHAM323097 ncbi Nitrobacter hamburgensis X143
NGON242231 ncbi Neisseria gonorrhoeae FA 10904
NEUT335283 ncbi Nitrosomonas eutropha C914
NEUR228410 ncbi Nitrosomonas europaea ATCC 197184
MXAN246197 ncbi Myxococcus xanthus DK 16223
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL13
MSP266779 ncbi Chelativorans sp. BNC13
MPET420662 ncbi Methylibium petroleiphilum PM14
MMAR394221 ncbi Maricaulis maris MCS103
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MLOT266835 ncbi Mesorhizobium loti MAFF3030993
MFLA265072 ncbi Methylobacillus flagellatus KT4
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath4
MAQU351348 ncbi Marinobacter aquaeolei VT84
LPNE400673 ncbi Legionella pneumophila Corby4
LPNE297246 ncbi Legionella pneumophila Paris4
LPNE297245 ncbi Legionella pneumophila Lens4
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 14
LCHO395495 ncbi Leptothrix cholodnii SP-64
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille4
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HNEP81032 Hyphomonas neptunium3
HINF71421 ncbi Haemophilus influenzae Rd KW203
HINF374930 ncbi Haemophilus influenzae PittEE3
HINF281310 ncbi Haemophilus influenzae 86-028NP3
HHAL349124 ncbi Halorhodospira halophila SL13
HDUC233412 ncbi Haemophilus ducreyi 35000HP3
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans4
GURA351605 ncbi Geobacter uraniireducens Rf44
GSUL243231 ncbi Geobacter sulfurreducens PCA3
GOXY290633 ncbi Gluconobacter oxydans 621H3
GMET269799 ncbi Geobacter metallireducens GS-154
GBET391165 ncbi Granulibacter bethesdensis CGDNIH13
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-004
FTUL418136 ncbi Francisella tularensis tularensis WY96-34184
FTUL401614 ncbi Francisella novicida U1124
FTUL393115 ncbi Francisella tularensis tularensis FSC1983
FTUL393011 ncbi Francisella tularensis holarctica OSU183
FTUL351581 Francisella tularensis holarctica FSC2004
FRANT ncbi Francisella tularensis tularensis SCHU S43
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250173
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O13
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0733
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSHI398580 ncbi Dinoroseobacter shibae DFL 123
DPSY177439 ncbi Desulfotalea psychrophila LSv544
DOLE96561 ncbi Desulfococcus oleovorans Hxd34
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB4
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CSP78 Caulobacter sp.3
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CJAP155077 Cellvibrio japonicus4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN3
CBLO203907 ncbi Candidatus Blochmannia floridanus3
CAULO ncbi Caulobacter crescentus CB153
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTRI382640 ncbi Bartonella tribocorum CIP 1054763
BTHA271848 ncbi Burkholderia thailandensis E2644
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSP376 Bradyrhizobium sp.3
BSP36773 Burkholderia sp.4
BQUI283165 ncbi Bartonella quintana Toulouse3
BPSE320373 ncbi Burkholderia pseudomallei 6684
BPSE320372 ncbi Burkholderia pseudomallei 1710b4
BPSE272560 ncbi Burkholderia pseudomallei K962434
BPET94624 Bordetella petrii4
BPER257313 ncbi Bordetella pertussis Tohama I3
BPAR257311 ncbi Bordetella parapertussis 128223
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102474
BMAL320388 ncbi Burkholderia mallei SAVP14
BMAL243160 ncbi Burkholderia mallei ATCC 233444
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1103
BHEN283166 ncbi Bartonella henselae Houston-13
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB504
BBAC360095 ncbi Bartonella bacilliformis KC5833
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP76114 ncbi Aromatoleum aromaticum EbN13
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH724
ASP232721 ncbi Acidovorax sp. JS423
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL033
APLE416269 ncbi Actinobacillus pleuropneumoniae L203
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232703
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-13
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C4
ACRY349163 ncbi Acidiphilium cryptum JF-53
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N4
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3453
AAVE397945 ncbi Acidovorax citrulli AAC00-14


Names of the homologs of the genes in the group in each of these orgs
  G6472   EG12375   EG11409   EG10519   
YPSE349747 YPSIP31758_2572YPSIP31758_2578YPSIP31758_2576YPSIP31758_2571
YPSE273123 YPTB1424YPTB1419YPTB1421YPTB1425
YPES386656 YPDSF_2296YPDSF_2301YPDSF_2299YPDSF_2295
YPES377628 YPN_2578YPN_2583YPN_2581YPN_2577
YPES360102 YPA_0693YPA_0685YPA_0687YPA_0694
YPES349746 YPANGOLA_A1964YPANGOLA_A1958YPANGOLA_A1960YPANGOLA_A1965
YPES214092 YPO1399YPO1394YPO1396YPO1400
YPES187410 Y2778Y2776Y2772
YENT393305 YE1549YE1542YE1544YE1550
XORY360094 XOOORF_2348XOOORF_2352XOOORF_2353
XORY342109 XOO2178XOO2174XOO2173
XORY291331 XOO2300XOO2296XOO2295
XFAS405440 XFASM12_0386XFASM12_0390XFASM12_1327
XFAS183190 PD_0358PD_0362PD_1337
XFAS160492 XF1078XF1082XF2299
XCAM487884 XCC-B100_2057XCC-B100_2061XCC-B100_2062
XCAM316273 XCAORF_2387XCAORF_2383XCAORF_2382
XCAM314565 XC_1992XC_1996XC_1997
XCAM190485 XCC2123XCC2119XCC2118
XAXO190486 XAC2084XAC2088XAC2089
XAUT78245 XAUT_2212XAUT_1481XAUT_2630
VVUL216895 VV1_2087VV1_2084VV1_2086VV1_2088
VVUL196600 VV2354VV2359VV2355VV2353
VPAR223926 VP0981VP0983VP0984
VFIS312309 VFA0426VFA0423VFA0425VFA0427
VEIS391735 VEIS_4893VEIS_0403VEIS_4893VEIS_4894
VCHO345073 VC0395_A1467VC0395_A1470VC0395_A1468VC0395_A1466
VCHO VC1876VC1879VC1877VC1875
TTUR377629 TERTU_2813TERTU_2467TERTU_2464TERTU_2463
TDEN292415 TBD_1506TBD_1759TBD_1508TBD_1505
TCRU317025 TCR_0959TCR_0957TCR_0958TCR_0960
STYP99287 STM0987STM0983STM0985STM0988
SSP94122 SHEWANA3_2582SHEWANA3_2585SHEWANA3_2583SHEWANA3_1906
SSP644076 SCH4B_3432SCH4B_2840SCH4B_3376
SSP292414 TM1040_0056TM1040_2642TM1040_0014
SSON300269 SSO_0919SSO_0915SSO_0917SSO_0920
SSED425104 SSED_2824SSED_2827SSED_2825SSED_2424
SPRO399741 SPRO_1718SPRO_1711SPRO_1713SPRO_1719
SPEA398579 SPEA_1772SPEA_1769SPEA_1771SPEA_1985
SONE211586 SO_2800SO_2803SO_2801SO_2478
SMEL266834 SMC03803SMC00892SMC02898
SMED366394 SMED_3047SMED_0426SMED_3427
SLOI323850 SHEW_1640SHEW_1637SHEW_1639SHEW_1856
SLAC55218 SL1157_1454SL1157_1427SL1157_1124
SHIGELLA YCARYCAHKDSB
SHAL458817 SHAL_2504SHAL_2507SHAL_2505SHAL_2316
SGLO343509 SG0997SG0996SG0998
SFUM335543 SFUM_3635SFUM_1716SFUM_0346SFUM_0010
SFLE373384 SFV_0918SFV_0914SFV_0916SFV_0919
SFLE198214 AAN42542.1AAN42540.1AAN42543.1
SENT454169 SEHA_C1085SEHA_C1081SEHA_C1083SEHA_C1086
SENT321314 SCH_0944SCH_0942SCH_0945
SENT295319 SPA1811SPA1813SPA1810
SENT220341 STY0989STY0984STY0986STY0990
SENT209261 T1947T1951T1949T1946
SDYS300267 SDY_2341SDY_2345SDY_2343SDY_2340
SDEN318161 SDEN_2197SDEN_2200SDEN_2198SDEN_2134
SDEG203122 SDE_1297SDE_1702SDE_2059SDE_2058
SBOY300268 SBO_2205SBO_2201SBO_2203SBO_2206
SBAL402882 SHEW185_1670SHEW185_1667SHEW185_1669SHEW185_2363
SBAL399599 SBAL195_1707SBAL195_1704SBAL195_1706SBAL195_2478
SACI56780 SYN_02533SYN_01563SYN_02057
RSPH349102 RSPH17025_2896RSPH17025_0060RSPH17025_2752
RSPH349101 RSPH17029_0141RSPH17029_0113RSPH17029_2821
RSPH272943 RSP_1491RSP_1462RSP_1160
RSOL267608 RSC2531RSC1120RSC2530RSC2532
RRUB269796 RRU_A3709RRU_A0582RRU_A3163
RPOM246200 SPO_3421SPO_3445SPO_0038
RPAL316058 RPB_0294RPB_1856RPB_1768
RPAL316057 RPD_0454RPD_4108RPD_3537
RPAL316056 RPC_0266RPC_4704RPC_3731
RPAL316055 RPE_0408RPE_0881RPE_3769
RPAL258594 RPA0269RPA1159RPA3694
RMET266264 RMET_0534RMET_1043RMET_0535RMET_0533
RLEG216596 RL4569RL0904RL0140
RFER338969 RFER_3156RFER_2476RFER_3155RFER_3157
REUT381666 H16_A0605H16_A1176H16_A0606H16_A0604
REUT264198 REUT_A0592REUT_A1079REUT_A0593REUT_A0591
RETL347834 RHE_CH03977RHE_CH00846RHE_CH00132
RDEN375451 RD1_0037RD1_0294RD1_0375
PSYR223283 PSPTO_3844PSPTO_3848PSPTO_3845PSPTO_3843
PSYR205918 PSYR_1632PSYR_1635PSYR_1636
PSTU379731 PST_2635PST_2639PST_2636PST_2634
PSP312153 PNUC_0283PNUC_1465PNUC_0284PNUC_0282
PSP296591 BPRO_2950BPRO_3158BPRO_2949BPRO_2951
PPUT76869 PPUTGB1_1477PPUTGB1_1473PPUTGB1_1476PPUTGB1_1478
PPUT351746 PPUT_3813PPUT_3817PPUT_3814PPUT_3812
PPUT160488 PP_1901PP_1897PP_1900PP_1902
PPRO298386 PBPRA2383PBPRA2386PBPRA2384PBPRA2382
PNAP365044 PNAP_1922PNAP_1205PNAP_1923PNAP_1921
PMUL272843 PM0859PM0862PM0860PM0858
PMEN399739 PMEN_1615PMEN_1611PMEN_1614PMEN_1616
PLUM243265 PLU1633PLU1629PLU1631PLU1634
PING357804 PING_0902PING_0899PING_0901PING_0903
PHAL326442 PSHAA1659PSHAA1662PSHAA1660PSHAA1658
PFLU220664 PFL_1779PFL_1775PFL_1778PFL_1780
PFLU216595 PFLU3771PFLU3775PFLU3772PFLU3770
PFLU205922 PFL_4174PFL_4178PFL_4175PFL_4173
PENT384676 PSEEN1604PSEEN1603PSEEN1605
PCAR338963 PCAR_1262PCAR_1043PCAR_1261PCAR_1946
PATL342610 PATL_1782PATL_1779PATL_1781PATL_1783
PAER208964 PA2980PA2984PA2981PA2979
PAER208963 PA14_25520PA14_25480PA14_25510PA14_25530
OCAR504832 OCAR_4348OCAR_7251OCAR_7435
OANT439375 OANT_3286OANT_3047OANT_0017
NWIN323098 NWI_0075NWI_2555NWI_0286
NOCE323261 NOC_2677NOC_2672NOC_2676NOC_2840
NMUL323848 NMUL_A1027NMUL_A2506NMUL_A0430
NMEN374833 NMCC_0628NMCC_0660NMCC_0626NMCC_0629
NMEN272831 NMC0623NMC0652NMC0621NMC0624
NMEN122587 NMA0874NMA0906NMA0872NMA0875
NMEN122586 NMB_0674NMB_0702NMB_0672NMB_0675
NHAM323097 NHAM_0083NHAM_3177NHAM_0376
NGON242231 NGO0244NGO0276NGO0242NGO0245
NEUT335283 NEUT_2110NEUT_0728NEUT_2110NEUT_0435
NEUR228410 NE2164NE2408NE2164NE1686
MXAN246197 MXAN_2626MXAN_4711MXAN_1100
MSUC221988 MS0934MS0931MS0933MS0935
MSP409 M446_0487M446_6829M446_1619
MSP400668 MMWYL1_2153MMWYL1_2152MMWYL1_1126
MSP266779 MESO_3270MESO_0439MESO_4086
MPET420662 MPE_A2486MPE_A2554MPE_A2485MPE_A2487
MMAR394221 MMAR10_2939MMAR10_0632MMAR10_0363
MMAG342108 AMB0009AMB4093AMB4168
MLOT266835 MSL4429MLR8270MLR5497
MFLA265072 MFLA_2088MFLA_2093MFLA_2089MFLA_2087
MEXT419610 MEXT_2253MEXT_2969MEXT_0340
MCAP243233 MCA_0634MCA_2627MCA_0633MCA_0635
MAQU351348 MAQU_1739MAQU_1744MAQU_1740MAQU_1738
LPNE400673 LPC_1374LPC_2668LPC_1262LPC_1373
LPNE297246 LPP1895LPP0680LPP1781LPP1894
LPNE297245 LPL1884LPL0663LPL1782LPL1883
LPNE272624 LPG1920LPG0626LPG1818LPG1919
LCHO395495 LCHO_2556LCHO_2608LCHO_2555LCHO_2557
KPNE272620 GKPORF_B5387GKPORF_B5382GKPORF_B5385GKPORF_B5387.1
JSP375286 MMA_2578MMA_1268MMA_2579MMA_2577
JSP290400 JANN_0424JANN_0399JANN_0216
ILOI283942 IL1511IL1514IL1512IL1510
HSOM228400 HSM_0997HSM_1500HSM_0996HSM_0998
HSOM205914 HS_0657HS_1022HS_0656HS_0658
HNEP81032 HNE_3545HNE_0700HNE_2908
HINF71421 HI_0061HI_0059HI_0058
HINF374930 CGSHIEE_02995CGSHIEE_03005CGSHIEE_03010
HINF281310 NTHI0073NTHI0069NTHI0068
HHAL349124 HHAL_1314HHAL_1245HHAL_1244
HDUC233412 HD_1256HD_0217HD_0334
HCHE349521 HCH_02705HCH_02699HCH_02704HCH_02706
HARS204773 HEAR2489HEAR2190HEAR2490HEAR2488
GURA351605 GURA_3227GURA_1885GURA_3228GURA_2980
GSUL243231 GSU_1657GSU_2258GSU_1896
GOXY290633 GOX0764GOX1984GOX0063
GMET269799 GMET_2346GMET_1915GMET_2347GMET_1275
GBET391165 GBCGDNIH1_0252GBCGDNIH1_2244GBCGDNIH1_1993
FTUL458234 FTA_1487FTA_2024FTA_1764FTA_1486
FTUL418136 FTW_0619FTW_1913FTW_0195FTW_0620
FTUL401614 FTN_0682FTN_0155FTN_1605FTN_0683
FTUL393115 FTF1479CFTF0110FTF1478C
FTUL393011 FTH_1362FTH_1608FTH_1361
FTUL351581 FTL_1400FTL_1916FTL_1667FTL_1399
FRANT FT.1481CLPXKKDSB
FPHI484022 FPHI_1862FPHI_1012FPHI_1861
ESP42895 ENT638_1436ENT638_1432ENT638_1434ENT638_1437
EFER585054 EFER_1061EFER_1057EFER_1059EFER_1062
ECOO157 YCARYCAIYCAHKDSB
ECOL83334 ECS1000ECS0996ECS0998ECS1001
ECOL585397 ECED1_0947ECED1_0940ECED1_0942ECED1_0948
ECOL585057 ECIAI39_2230ECIAI39_2234ECIAI39_2232ECIAI39_2229
ECOL585056 ECUMN_1110ECUMN_1106ECUMN_1108ECUMN_1111
ECOL585055 EC55989_0962EC55989_0958EC55989_0960EC55989_0963
ECOL585035 ECS88_0945ECS88_0941ECS88_0943ECS88_0946
ECOL585034 ECIAI1_0958ECIAI1_0954ECIAI1_0956ECIAI1_0959
ECOL481805 ECOLC_2679ECOLC_2683ECOLC_2681ECOLC_2678
ECOL469008 ECBD_2678ECBD_2682ECBD_2680ECBD_2677
ECOL439855 ECSMS35_2203ECSMS35_2207ECSMS35_2205ECSMS35_2202
ECOL413997 ECB_00921ECB_00917ECB_00919ECB_00922
ECOL409438 ECSE_0976ECSE_0972ECSE_0974ECSE_0977
ECOL405955 APECO1_25APECO1_27APECO1_30
ECOL364106 UTI89_C0988UTI89_C0984UTI89_C0986UTI89_C0989
ECOL362663 ECP_0928ECP_0924ECP_0926ECP_0929
ECOL331111 ECE24377A_1015ECE24377A_1011ECE24377A_1013ECE24377A_1016
ECOL316407 ECK0908:JW0900:B0917ECK0904:JW5120:B0913ECK0906:JW0898:B0915ECK0909:JW0901:B0918
ECOL199310 C1058C1052C1059
ECAR218491 ECA2555ECA2558ECA2556ECA2554
DVUL882 DVU_3257DVU_2468DVU_3114
DSHI398580 DSHI_0033DSHI_0031DSHI_3575
DPSY177439 DP2232DP1704DP1938DP2214
DOLE96561 DOLE_1914DOLE_0767DOLE_1433DOLE_0968
DDES207559 DDE_0547DDE_2600DDE_3647
DARO159087 DARO_3207DARO_2832DARO_3208DARO_3206
CVIO243365 CV_3345CV_0471CV_3346CV_3344
CVES412965 COSY_0767COSY_0768COSY_0766
CSP78 CAUL_4588CAUL_4542CAUL_4581
CSP501479 CSE45_4140CSE45_2790CSE45_5462
CSAL290398 CSAL_1588CSAL_1585CSAL_1587CSAL_1589
CRUT413404 RMAG_0842RMAG_0843RMAG_0841
CPSY167879 CPS_2127CPS_2124CPS_2126CPS_2128
CJAP155077 CJA_1358CJA_1778CJA_1781CJA_1782
CBUR434922 COXBU7E912_0920COXBU7E912_0923COXBU7E912_1596
CBUR360115 COXBURSA331_A1095COXBURSA331_A1092COXBURSA331_A0589
CBLO291272 BPEN_388BPEN_389BPEN_387
CBLO203907 BFL377BFL378BFL376
CAULO CC0108CC0301CC2934
BVIE269482 BCEP1808_2639BCEP1808_2190BCEP1808_2638BCEP1808_2640
BTRI382640 BT_1765BT_0296BT_0262
BTHA271848 BTH_I0741BTH_I1890BTH_I0742BTH_I0740
BSUI470137 BSUIS_B0883BSUIS_B0220BSUIS_A0041
BSUI204722 BR_A0891BR_A0216BR_0038
BSP376 BRADO0313BRADO6095BRADO1000
BSP36773 BCEP18194_A5877BCEP18194_A5417BCEP18194_A5876BCEP18194_A5878
BQUI283165 BQ10150BQ02550BQ02230
BPSE320373 BURPS668_0926BURPS668_2581BURPS668_0927BURPS668_0925
BPSE320372 BURPS1710B_A1140BURPS1710B_A2949BURPS1710B_A1141BURPS1710B_A1139
BPSE272560 BPSL0877BPSL2274BPSL0878BPSL0876
BPET94624 BPET2671BPET2761BPET2670BPET2672
BPER257313 BP2767BP2766BP2768
BPAR257311 BPP2562BPP2563BPP2561
BOVI236 GBOORFA0918GBOORFA0213GBOORF0038
BMEL359391 BAB2_0345BAB2_0210BAB1_0035
BMEL224914 BMEII0403BMEII1028BMEI1904
BMAL320389 BMA10247_2152BMA10247_1471BMA10247_2151BMA10247_2153
BMAL320388 BMASAVP1_A0570BMASAVP1_A2198BMASAVP1_A0569BMASAVP1_A0571
BMAL243160 BMA_2274BMA_1693BMA_2273BMA_2275
BJAP224911 BSR0601BLL7514BLL1422
BHEN283166 BH12860BH02670BH02360
BCEN331272 BCEN2424_2546BCEN2424_2111BCEN2424_2545BCEN2424_2547
BCEN331271 BCEN_1934BCEN_5966BCEN_1933BCEN_1935
BCAN483179 BCAN_B0909BCAN_B0217BCAN_A0040
BBRO257310 BB2007BB2304BB2008BB2006
BBAC360095 BARBAKC583_1098BARBAKC583_1203BARBAKC583_1236
BAMB398577 BAMMC406_2464BAMMC406_2021BAMMC406_2463BAMMC406_2465
BAMB339670 BAMB_2594BAMB_2148BAMB_2593BAMB_2595
BABO262698 BRUAB2_0341BRUAB2_0212BRUAB1_0038
ASP76114 EBA5822EBA5085EBA5086
ASP62977 ACIAD2639ACIAD2363ACIAD2362
ASP62928 AZO1471AZO1512AZO1470AZO1472
ASP232721 AJS_2306AJS_2305AJS_2307
ASAL382245 ASA_1553ASA_1550ASA_1552ASA_1554
APLE434271 APJL_0768APJL_1290APJL_0085
APLE416269 APL_0766APL_1278APL_0085
AHYD196024 AHA_2776AHA_2779AHA_2777AHA_2775
AFER243159 AFE_2547AFE_2548AFE_2546
AEHR187272 MLG_1437MLG_1434MLG_1433
ADEH290397 ADEH_2608ADEH_1270ADEH_2613ADEH_4175
ACRY349163 ACRY_2125ACRY_0650ACRY_0643
ACAU438753 AZC_4232AZC_2383AZC_0137
ABOR393595 ABO_2103ABO_1052ABO_1056ABO_1057
ABAU360910 BAV2101BAV1541BAV2100BAV2102
ABAC204669 ACID345_0140ACID345_4719ACID345_0573
AAVE397945 AAVE_2563AAVE_1352AAVE_2564AAVE_2562


Organism features enriched in list (features available for 233 out of the 249 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00001171992
Disease:Brucellosis 0.009934555
Disease:Bubonic_plague 0.003918866
Disease:Dysentery 0.003918866
Disease:Gastroenteritis 0.00600051013
Disease:Tularemia 0.009934555
Endospores:No 1.649e-1442211
Endospores:Yes 2.715e-10253
GC_Content_Range4:0-40 1.416e-2627213
GC_Content_Range4:40-60 3.571e-7118224
GC_Content_Range4:60-100 3.289e-988145
GC_Content_Range7:0-30 6.409e-9247
GC_Content_Range7:30-40 5.143e-1625166
GC_Content_Range7:50-60 4.660e-1376107
GC_Content_Range7:60-70 1.811e-1187134
Genome_Size_Range5:0-2 5.055e-1918155
Genome_Size_Range5:2-4 0.000246560197
Genome_Size_Range5:4-6 7.486e-21125184
Genome_Size_Range5:6-10 0.00033893047
Genome_Size_Range9:0-1 0.0007283327
Genome_Size_Range9:1-2 3.941e-1515128
Genome_Size_Range9:2-3 9.549e-628120
Genome_Size_Range9:4-5 5.002e-96496
Genome_Size_Range9:5-6 1.129e-96188
Genome_Size_Range9:6-8 0.00004722738
Gram_Stain:Gram_Neg 3.105e-51216333
Habitat:Multiple 0.001096187178
Habitat:Specialized 0.0000324853
Motility:No 3.972e-1423151
Motility:Yes 1.247e-10144267
Optimal_temp.:- 0.0076485115257
Optimal_temp.:25-30 5.293e-71819
Optimal_temp.:35-37 5.400e-61313
Optimal_temp.:37 0.002092130106
Oxygen_Req:Aerobic 0.001764889185
Oxygen_Req:Anaerobic 2.520e-1014102
Oxygen_Req:Facultative 0.0000225103201
Pathogenic_in:Plant 0.00683291115
Shape:Coccobacillus 0.00062061011
Shape:Coccus 3.227e-71382
Shape:Rod 5.226e-19189347
Shape:Sphere 0.0042128219
Shape:Spiral 0.0001925434
Temp._range:Mesophilic 0.0000341207473
Temp._range:Thermophilic 2.209e-7135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 305
Effective number of orgs (counting one per cluster within 468 clusters): 244

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.1
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE292459 ncbi Symbiobacterium thermophilum IAM 148631
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93110
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63011
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
NSP35761 Nocardioides sp.1
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice11
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293281
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-11
DRAD243230 ncbi Deinococcus radiodurans R11
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CTET212717 ncbi Clostridium tetani E881
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CNOV386415 ncbi Clostridium novyi NT1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-401
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6301
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BSUB ncbi Bacillus subtilis subtilis 1681
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH0
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BCIC186490 Candidatus Baumannia cicadellinicola1
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G6472   EG12375   EG11409   EG10519   
WPIP955 WD_1160
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX2398
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA1968
TTHE262724 TT_C1603
TTEN273068 TTE0941
TSP28240
TSP1755 TETH514_2092
TPSE340099 TETH39_1406
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800 TFU_2509
TERY203124
TELO197221 TLL1702
TDEN326298 TMDEN_0727
TDEN243275
TACI273075
STRO369723
STOK273063
STHE322159 STER_1520
STHE299768 STR1561
STHE292459 STH473
STHE264199 STU1561
SSUI391296 SSU98_0655
SSUI391295 SSU05_0654
SSP84588 SYNW0184OR1239
SSP64471
SSP321332
SSP321327
SSP1148
SSP1131 SYNCC9605_0180
SSOL273057
SSAP342451 SSP1170
SRUB309807 SRU_0014
SPYO370554 MGAS10750_SPY1254
SPYO370553
SPYO370552 MGAS10270_SPY1218
SPYO370551 MGAS9429_SPY1194
SPYO319701 M28_SPY1141
SPYO293653 M5005_SPY1147
SPYO286636 M6_SPY1122
SPYO198466 SPYM3_1073
SPYO193567 SPS0790
SPYO186103 SPYM18_1416
SPYO160490 SPY1408
SPNE488221 SP70585_0995
SPNE487214 SPH_1055
SPNE487213 SPT_1247
SPNE171101 SPR0857
SPNE170187 SPN06131
SPNE1313 SPJ_0896
SMUT210007 SMU_626
SMAR399550
SHAE279808 SH1327
SGOR29390 SGO_1601
SERY405948
SEPI176280 SE_1274
SEPI176279 SERP1155
SELO269084 SYC1810_D
SCO SCO3027
SAVE227882 SAV5049
SAUR93062 SACOL1644
SAUR93061 SAOUHSC_01691
SAUR426430 NWMN_1490
SAUR418127 SAHV_1575
SAUR367830 SAUSA300_1547
SAUR359787 SAURJH1_1680
SAUR359786 SAURJH9_1645
SAUR282459 SAS1525
SAUR282458 SAR1665
SAUR273036
SAUR196620 MW1539
SAUR158879 SA1416
SAUR158878 SAV1588
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI330779
RXYL266117 RXYL_0044
RSP357808 ROSERS_4309
RSP101510
RSAL288705
RCAS383372
RALB246199 GRAORF_3136
PTOR263820
PTHE370438 PTH_0857
PPEN278197 PEPE_1149
PMOB403833 PMOB_1903
PMAR93060
PMAR74547 PMT1914
PMAR74546
PMAR59920
PMAR167555
PMAR167546 P9301ORF_1426
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244 OTBS_0199
OIHE221109 OB1979
NSP35761 NOCA_1426
NSP103690
NSEN222891 NSE_0317
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732 MOTH_0575
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0076
MMOB267748
MMAZ192952 MM3056
MMAR444158
MMAR426368
MMAR402880
MMAR368407 MEMAR_1713
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047 MCAP_0828
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043 LWE1495
LSPH444177 BSPH_0383
LSAK314315
LREU557436 LREU_0645
LPLA220668
LMON265669 LMOF2365_1501
LMON169963 LMO1482
LMES203120
LLAC272623 L0317
LLAC272622
LJOH257314 LJ_1003
LINN272626 LIN1517
LHEL405566 LHV_0889
LGAS324831 LGAS_1174
LDEL390333
LDEL321956
LCAS321967 LSEI_1325
LBRE387344
LACI272621 LBA0839
KRAD266940
IHOS453591
HWAL362976
HSP64091 VNG6354G
HSAL478009 OE6028R
HPYL85963 JHP0215
HPYL357544 HPAG1_0233
HPY HP0230
HMUK485914
HMOD498761 HM1_0097
HMAR272569 RRNAC2645
HBUT415426
HAUR316274 HAUR_2771
HACI382638 HAC_0307
GVIO251221
GTHE420246 GTNG_2451
GKAU235909 GKP05
FSP1855
FSP106370
FNOD381764
FMAG334413 FMG_0788
FALN326424
ERUM302409 ERGA_CDS_01260
ERUM254945 ERWE_CDS_01300
ELIT314225
EFAE226185 EF_2447
ECHA205920 ECH_0194
ECAN269484 ECAJ_0131
DSP255470
DSP216389
DRED349161 DRED_2510
DRAD243230 DR_1854
DHAF138119 DSY3147
DGEO319795
DETH243164
CTET212717 CTC_00821
CSUL444179
CPHY357809 CPHY_3555
CPER289380 CPR_1480
CPER195103 CPF_1849
CPER195102 CPE1597
CNOV386415 NT01CX_0198
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_3147
CJEJ407148 C8J_0764
CJEJ360109 JJD26997_1197
CJEJ354242 CJJ81176_0834
CJEJ195099 CJE_0904
CJEJ192222 CJ0813
CJEI306537
CHYD246194 CHY_0403
CHOM360107 CHAB381_1019
CGLU196627 CG1592
CFET360106 CFF8240_1083
CEFF196164 CE1539
CDIP257309
CDIF272563 CD2478
CDES477974 DAUD_2070
CCUR360105 CCV52592_0131
CCON360104 CCC13826_2053
CBOT498213 CLD_0328
CBOT441772 CLI_0500
CBEI290402 CBEI_1024
CACE272562 CAC0946
BXEN266265
BWEI315730 BCERKBAB4_4176
BTUR314724
BTHU412694 BALH_2515
BTHU281309 BT9727_3797
BSUB BSU25570
BSP107806
BPUM315750 BPUM_2291
BLON206672
BLIC279010 BL02087
BHER314723
BHAL272558 BH1335
BGAR290434
BCLA66692 ABC1648
BCIC186490 BCI_0256
BCER572264 BCA_2884
BCER405917 BCE_4406
BCER315749 BCER98_2755
BCER288681 BCE33L2530
BCER226900 BC_4322
BBUR224326
BAPH372461
BAPH198804
BANT592021 BAA_2866
BANT568206 BAMEG_1792
BANT261594 GBAA2803
BANT260799 BAS2613
BAMY326423 RBAM_023870
BAFZ390236
AYEL322098
AVAR240292
AURANTIMONAS
ASP1667
APHA212042 APH_0052
APER272557
AORE350688 CLOS_1221
ANAE240017
AMET293826 AMET_3062
AMAR329726 AM1_2194
AMAR234826 AM070
ALAI441768 ACL_0895
AFUL224325
ACEL351607 ACEL_0466
AAUR290340


Organism features enriched in list (features available for 285 out of the 305 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.568e-76792
Arrangment:Clusters 4.045e-61717
Arrangment:Filaments 0.00071801010
Disease:Food_poisoning 0.001493299
Disease:None 0.00142063958
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00034461111
Disease:Wide_range_of_infections 0.00034461111
Endospores:No 1.259e-17152211
Endospores:Yes 1.619e-94653
GC_Content_Range4:0-40 1.426e-17153213
GC_Content_Range4:40-60 1.312e-877224
GC_Content_Range4:60-100 0.000734755145
GC_Content_Range7:0-30 0.00013383547
GC_Content_Range7:30-40 5.646e-12118166
GC_Content_Range7:50-60 2.314e-827107
GC_Content_Range7:60-70 0.000021045134
GC_Content_Range7:70-100 0.00410751011
Genome_Size_Range5:0-2 5.957e-11110155
Genome_Size_Range5:2-4 0.0025565111197
Genome_Size_Range5:4-6 9.559e-1449184
Genome_Size_Range5:6-10 0.00634161547
Genome_Size_Range9:0-1 0.00031722227
Genome_Size_Range9:1-2 1.636e-788128
Genome_Size_Range9:2-3 0.000030778120
Genome_Size_Range9:4-5 1.186e-72496
Genome_Size_Range9:5-6 0.00001302588
Genome_Size_Range9:6-8 0.0006777938
Gram_Stain:Gram_Neg 8.183e-6963333
Gram_Stain:Gram_Pos 5.983e-49145150
Habitat:Multiple 0.002991773178
Habitat:Specialized 0.00008303953
Motility:No 9.379e-15114151
Motility:Yes 1.812e-6103267
Optimal_temp.:- 0.0050189112257
Optimal_temp.:30-37 1.915e-61818
Oxygen_Req:Aerobic 0.000321972185
Oxygen_Req:Anaerobic 0.000033268102
Pathogenic_in:Animal 0.00057452066
Pathogenic_in:No 0.0032341125226
Salinity:Non-halophilic 0.002808064106
Shape:Coccus 6.395e-126882
Shape:Irregular_coccus 4.045e-61717
Shape:Rod 5.246e-23112347
Shape:Sphere 0.00019141719
Temp._range:Hyperthermophilic 1.153e-62223
Temp._range:Mesophilic 0.0000475213473
Temp._range:Thermophilic 4.225e-73135



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462200.8157
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002410.7942
PWY-1269 (CMP-KDO biosynthesis I)3252440.7485
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951810.7283
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181930.7274
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912260.7205
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962270.7132
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251940.7100
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482460.7055
PWY-5918 (heme biosynthesis I)2722140.6957
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902200.6838
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862180.6819
PWY-5913 (TCA cycle variation IV)3012210.6603
TYRFUMCAT-PWY (tyrosine degradation I)1841650.6570
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491450.6564
PWY-4041 (γ-glutamyl cycle)2792100.6490
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831620.6393
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392320.6350
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911620.6088
PWY-5028 (histidine degradation II)1301250.5890
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911590.5875
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551900.5870
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292200.5810
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761470.5579
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982400.5521
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561350.5495
AST-PWY (arginine degradation II (AST pathway))1201120.5321
REDCITCYC (TCA cycle variation II)1741420.5292
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222440.5281
P344-PWY (acrylonitrile degradation)2101590.5204
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491770.5183
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491770.5183
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96950.5140
KDOSYN-PWY (KDO transfer to lipid IVA I)1801430.5137
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791420.5102
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162390.5060
PWY-5148 (acyl-CoA hydrolysis)2271650.5057
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121030.4970
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262060.4967
DAPLYSINESYN-PWY (lysine biosynthesis I)3422120.4960
GLUCONSUPER-PWY (D-gluconate degradation)2291630.4858
PWY-5386 (methylglyoxal degradation I)3051960.4857
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742220.4851
P601-PWY (D-camphor degradation)95900.4743
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001920.4728
PWY-3162 (tryptophan degradation V (side chain pathway))94890.4708
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351130.4696
PWY-46 (putrescine biosynthesis III)1381140.4644
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381140.4644
PWY-5340 (sulfate activation for sulfonation)3852220.4594
PWY0-501 (lipoate biosynthesis and incorporation I)3852220.4594
PWY-5188 (tetrapyrrole biosynthesis I)4392390.4564
GALACTCAT-PWY (D-galactonate degradation)104930.4520
PWY0-862 (cis-dodecenoyl biosynthesis)3432040.4408
GLUT-REDOX-PWY (glutathione redox reactions II)2461640.4403
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94850.4342
PWY-5938 ((R)-acetoin biosynthesis I)3762150.4336
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652110.4332
GALACTARDEG-PWY (D-galactarate degradation I)1511170.4332
GALACTITOLCAT-PWY (galactitol degradation)73710.4261
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111890.4240
POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))116960.4179
LIPASYN-PWY (phospholipases)2121450.4168
VALDEG-PWY (valine degradation I)2901790.4145
GLUCARDEG-PWY (D-glucarate degradation I)1521150.4139
PWY-6389 ((S)-acetoin biosynthesis)3682090.4126
PROSYN-PWY (proline biosynthesis I)4752430.4093
PWY-5025 (IAA biosynthesis IV)92810.4085
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81740.4056
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891770.4041
PWY-6087 (4-chlorocatechol degradation)2231480.4024



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12375   EG11409   EG10519   
G64720.9993170.9997830.999744
EG123750.9995260.999306
EG114090.999719
EG10519



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PAIRWISE BLAST SCORES:

  G6472   EG12375   EG11409   EG10519   
G64720.0f0---
EG12375-0.0f0--
EG11409--0.0f0-
EG10519---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis) (degree of match pw to cand: 0.125, degree of match cand to pw: 0.500, average score: 0.609)
  Genes in pathway or complex:
             0.4689 0.0595 EG10520 (waaA) KDOTRANS-MONOMER (KDO transferase)
             0.4769 0.0789 EG10545 (lpxA) UDPNACETYLGLUCOSAMACYLTRANS-MONOMER (LpxA)
             0.0928 0.0019 EG10265 (lpxC) UDPACYLGLCNACDEACETYL-MONOMER (UDP-3-O-acyl-N-acetylglucosamine deacetylase)
             0.5062 0.1688 EG10316 (lpxD) UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-MONO (UDP-3-O-[3-hydroxymyristoyl]glucosamine N-acetyltransferase)
             0.9705 0.9573 EG12666 (lpxH) EG12666-MONOMER (UDP-2,3-diacylglucosamine hydrolase)
   *in cand* 0.9998 0.9995 EG11409 (lpxK) TETRAACYLDISACC4KIN-MONOMER (tetraacyldisaccharide 4'-kinase)
             0.5196 0.1075 EG10546 (lpxB) LIPIDADISACCHARIDESYNTH-MONOMER (LpxB)
             0.9169 0.7804 EG10464 (lpxL) LAUROYLACYLTRAN-MONOMER (lauroyl acyltransferase)
             0.7416 0.3751 G7241 (lpxP) PALMITOTRANS-MONOMER (palmitoleoyl acyltransferase)
             0.7397 0.4991 EG10614 (lpxM) MYRISTOYLACYLTRAN-MONOMER (myristoyl-acyl carrier protein (ACP)-dependent acyltransferase)
             0.5625 0.0621 EG10973 (gutQ) EG10973-MONOMER (D-arabinose 5-phosphate isomerase)
             0.5233 0.0445 G7662 (kdsD) G7662-MONOMER (D-arabinose 5-phosphate isomerase)
             0.6927 0.2470 EG10518 (kdsA) KDO-8PSYNTH-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate synthase)
             0.3126 0.0506 G7663 (kdsC) G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)
   *in cand* 0.9997 0.9993 EG10519 (kdsB) CPM-KDOSYNTH-MONOMER (3-deoxy-D-manno-octulosonate cytidylyltransferase)
             0.9879 0.9803 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG12375 (ycaI) EG12375-MONOMER (conserved inner membrane protein)
   *in cand* 0.9997 0.9993 G6472 (ycaR) G6472-MONOMER (conserved protein)

- LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis) (degree of match pw to cand: 0.080, degree of match cand to pw: 0.500, average score: 0.607)
  Genes in pathway or complex:
             0.4769 0.0789 EG10545 (lpxA) UDPNACETYLGLUCOSAMACYLTRANS-MONOMER (LpxA)
             0.0928 0.0019 EG10265 (lpxC) UDPACYLGLCNACDEACETYL-MONOMER (UDP-3-O-acyl-N-acetylglucosamine deacetylase)
             0.5062 0.1688 EG10316 (lpxD) UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-MONO (UDP-3-O-[3-hydroxymyristoyl]glucosamine N-acetyltransferase)
             0.9705 0.9573 EG12666 (lpxH) EG12666-MONOMER (UDP-2,3-diacylglucosamine hydrolase)
   *in cand* 0.9998 0.9995 EG11409 (lpxK) TETRAACYLDISACC4KIN-MONOMER (tetraacyldisaccharide 4'-kinase)
             0.5196 0.1075 EG10546 (lpxB) LIPIDADISACCHARIDESYNTH-MONOMER (LpxB)
             0.5625 0.0621 EG10973 (gutQ) EG10973-MONOMER (D-arabinose 5-phosphate isomerase)
             0.5233 0.0445 G7662 (kdsD) G7662-MONOMER (D-arabinose 5-phosphate isomerase)
             0.6927 0.2470 EG10518 (kdsA) KDO-8PSYNTH-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate synthase)
             0.3126 0.0506 G7663 (kdsC) G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)
   *in cand* 0.9997 0.9993 EG10519 (kdsB) CPM-KDOSYNTH-MONOMER (3-deoxy-D-manno-octulosonate cytidylyltransferase)
             0.4689 0.0595 EG10520 (waaA) KDOTRANS-MONOMER (KDO transferase)
             0.7397 0.4991 EG10614 (lpxM) MYRISTOYLACYLTRAN-MONOMER (myristoyl-acyl carrier protein (ACP)-dependent acyltransferase)
             0.9169 0.7804 EG10464 (lpxL) LAUROYLACYLTRAN-MONOMER (lauroyl acyltransferase)
             0.3247 0.1190 EG11423 (waaK) EG11423-MONOMER (lipopolysaccharide core biosynthesis; heptosyl transferase IV; probably hexose transferase)
             0.2114 0.1251 EG11353 (waaJ) EG11353-MONOMER (UDP-glucose:(glucosyl)LPS α-1,2-glucosyltransferase)
             0.3725 0.1482 EG11352 (waaI) EG11352-MONOMER (UDP-D-glucose:(glucosyl)LPS α-1,3-glucosyltransferase)
             0.7064 0.4520 EG11351 (waaB) EG11351-MONOMER (UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase)
             0.1136 0.0902 EG11425 (waaY) EG11425-MONOMER (lipopolysaccharide core heptose (II) kinase)
             0.2975 0.0468 EG11341 (waaQ) EG11341-MONOMER (lipopolysaccharide core heptosyl transferase III)
             0.0915 0.0394 EG11340 (waaP) EG11340-MONOMER (lipopolysaccharide core heptose (I) kinase)
             0.4172 0.3129 EG11339 (waaG) EG11339-MONOMER (lipopolysaccharide glucosyltransferase I)
             0.4492 0.0417 EG12210 (waaF) EG12210-MONOMER (ADP-heptose:LPS heptosyltransferase II)
             0.2005 0.0033 EG11189 (waaC) EG11189-MONOMER (ADP-heptose:LPS heptosyl transferase I)
             0.9879 0.9803 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9993 EG12375 (ycaI) EG12375-MONOMER (conserved inner membrane protein)
   *in cand* 0.9997 0.9993 G6472 (ycaR) G6472-MONOMER (conserved protein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10519 G6472 (centered at EG10519)
EG11409 (centered at EG11409)
EG12375 (centered at EG12375)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6472   EG12375   EG11409   EG10519   
233/623311/623305/623337/623
AAEO224324:0:Tyes--6790
AAVE397945:0:Tyes1193011941192
ABAC204669:0:Tyes-04625439
ABAU360910:0:Tyes5530552554
ABOR393595:0:Tyes1069045
ABUT367737:0:Tyes--024
ACAU438753:0:Tyes4150-22760
ACEL351607:0:Tyes0---
ACRY349163:8:Tyes1491-70
ADEH290397:0:Tyes1353013582934
AEHR187272:0:Tyes-410
AFER243159:0:Tyes1-20
AHYD196024:0:Tyes1420
ALAI441768:0:Tyes-0--
AMAR234826:0:Tyes0---
AMAR329726:9:Tyes---0
AMET293826:0:Tyes-0--
AORE350688:0:Tyes-0--
APHA212042:0:Tyes0---
APLE416269:0:Tyes-68111970
APLE434271:0:Tno-65111810
ASAL382245:5:Tyes3024
ASP232721:2:Tyes1-02
ASP62928:0:Tyes14202
ASP62977:0:Tyes-25710
ASP76114:2:Tyes-42901
BABO262698:0:Tno118-0-
BABO262698:1:Tno---0
BAMB339670:3:Tno4600459461
BAMB398577:3:Tno4530452454
BAMY326423:0:Tyes-0--
BANT260799:0:Tno-0--
BANT261594:2:Tno-0--
BANT568206:2:Tyes-0--
BANT592021:2:Tno-0--
BBAC264462:0:Tyes--6310
BBAC360095:0:Tyes0-97127
BBRO257310:0:Tyes129920
BCAN483179:0:Tno656-0-
BCAN483179:1:Tno---0
BCEN331271:0:Tno-0--
BCEN331271:2:Tno1-02
BCEN331272:3:Tyes4340433435
BCER226900:1:Tyes-0--
BCER288681:0:Tno-0--
BCER315749:1:Tyes-0--
BCER405917:1:Tyes-0--
BCER572264:1:Tno-0--
BCIC186490:0:Tyes0---
BCLA66692:0:Tyes-0--
BFRA272559:1:Tyes--10190
BFRA295405:0:Tno--12540
BHAL272558:0:Tyes-0--
BHEN283166:0:Tyes971-300
BJAP224911:0:Fyes0-6957832
BLIC279010:0:Tyes-0--
BMAL243160:1:Tno5170516518
BMAL320388:1:Tno1159002
BMAL320389:1:Tyes6640663665
BMEL224914:0:Tno0-631-
BMEL224914:1:Tno---0
BMEL359391:0:Tno117-0-
BMEL359391:1:Tno---0
BOVI236:0:Tyes535-0-
BOVI236:1:Tyes---0
BPAR257311:0:Tno1-20
BPER257313:0:Tyes1-02
BPET94624:0:Tyes19502
BPSE272560:1:Tyes1140420
BPSE320372:1:Tno1170320
BPSE320373:1:Tno1159720
BPUM315750:0:Tyes-0--
BQUI283165:0:Tyes701-280
BSP36773:2:Tyes4690468470
BSP376:0:Tyes0-5493641
BSUB:0:Tyes-0--
BSUI204722:0:Tyes641-0-
BSUI204722:1:Tyes---0
BSUI470137:0:Tno613-0-
BSUI470137:1:Tno---0
BTHA271848:1:Tno1112620
BTHE226186:0:Tyes--11650
BTHU281309:1:Tno-0--
BTHU412694:1:Tno-0--
BTRI382640:1:Tyes1316-270
BVIE269482:7:Tyes4390438440
BWEI315730:4:Tyes-0--
CABO218497:0:Tyes--0339
CACE272562:1:Tyes-0--
CAULO:0:Tyes0-1942869
CBEI290402:0:Tyes-0--
CBLO203907:0:Tyes1-20
CBLO291272:0:Tno1-20
CBOT36826:1:Tno-0-2281
CBOT441770:0:Tyes-0-2174
CBOT441771:0:Tno-0-2078
CBOT441772:1:Tno-0--
CBOT498213:1:Tno-0--
CBOT508765:1:Tyes-1627-0
CBOT515621:2:Tyes-0-2431
CBOT536232:0:Tno-0-2513
CBUR227377:1:Tyes--3640
CBUR360115:1:Tno-4704680
CBUR434922:2:Tno-02650
CCAV227941:1:Tyes--0374
CCHL340177:0:Tyes--0151
CCON360104:2:Tyes---0
CCUR360105:0:Tyes---0
CDES477974:0:Tyes-0--
CDIF272563:1:Tyes-0--
CEFF196164:0:Fyes0---
CFEL264202:1:Tyes--3920
CFET360106:0:Tyes---0
CGLU196627:0:Tyes0---
CHOM360107:1:Tyes---0
CHUT269798:0:Tyes--01022
CHYD246194:0:Tyes-0--
CJAP155077:0:Tyes0408411412
CJEJ192222:0:Tyes---0
CJEJ195099:0:Tno---0
CJEJ354242:2:Tyes---0
CJEJ360109:0:Tyes---0
CJEJ407148:0:Tno---0
CKLU431943:1:Tyes-0--
CMUR243161:1:Tyes--2250
CNOV386415:0:Tyes-0--
CPEL335992:0:Tyes--0362
CPER195102:1:Tyes-0--
CPER195103:0:Tno-0--
CPER289380:3:Tyes-0--
CPHY357809:0:Tyes-0--
CPNE115711:1:Tyes--0298
CPNE115713:0:Tno--2880
CPNE138677:0:Tno--2960
CPNE182082:0:Tno--3110
CPRO264201:0:Fyes--9800
CPSY167879:0:Tyes3024
CRUT413404:0:Tyes1-20
CSAL290398:0:Tyes3024
CSP501479:1:Fyes---0
CSP501479:6:Fyes0---
CSP501479:8:Fyes--0-
CSP78:2:Tyes46-039
CTEP194439:0:Tyes--0151
CTET212717:0:Tyes-0--
CTRA471472:0:Tyes--2290
CTRA471473:0:Tno--2290
CVES412965:0:Tyes1-20
CVIO243365:0:Tyes2952029532951
DARO159087:0:Tyes3770378376
DDES207559:0:Tyes-020903155
DHAF138119:0:Tyes-0--
DNOD246195:0:Tyes--5260
DOLE96561:0:Tyes11480664201
DPSY177439:2:Tyes5390244522
DRAD243230:3:Tyes-0--
DRED349161:0:Tyes-0--
DSHI398580:5:Tyes2-03586
DVUL882:1:Tyes-7870645
ECAN269484:0:Tyes0---
ECAR218491:0:Tyes1420
ECHA205920:0:Tyes0---
ECOL199310:0:Tno40-5
ECOL316407:0:Tno4025
ECOL331111:6:Tno4025
ECOL362663:0:Tno4025
ECOL364106:1:Tno4025
ECOL405955:2:Tyes-025
ECOL409438:6:Tyes4025
ECOL413997:0:Tno4025
ECOL439855:4:Tno1530
ECOL469008:0:Tno1530
ECOL481805:0:Tno1530
ECOL585034:0:Tno4025
ECOL585035:0:Tno4025
ECOL585055:0:Tno4025
ECOL585056:2:Tno4025
ECOL585057:0:Tno1530
ECOL585397:0:Tno7028
ECOL83334:0:Tno4025
ECOLI:0:Tno4025
ECOO157:0:Tno4025
EFAE226185:3:Tyes-0--
EFER585054:1:Tyes4025
ERUM254945:0:Tyes0---
ERUM302409:0:Tno0---
ESP42895:1:Tyes4025
FJOH376686:0:Tyes--04306
FMAG334413:1:Tyes-0--
FNUC190304:0:Tyes--3230
FPHI484022:1:Tyes876-0875
FRANT:0:Tno1287-01286
FSUC59374:0:Tyes-0-273
FTUL351581:0:Tno14712460
FTUL393011:0:Tno1-2040
FTUL393115:0:Tyes1262-01261
FTUL401614:0:Tyes52201438523
FTUL418136:0:Tno38014330381
FTUL458234:0:Tno14222220
GBET391165:0:Tyes0-19921741
GFOR411154:0:Tyes--8830
GKAU235909:0:Tyes-0--
GMET269799:1:Tyes108465310850
GOXY290633:5:Tyes696-19070
GSUL243231:0:Tyes-0599237
GTHE420246:1:Tyes-0--
GURA351605:0:Tyes1335013361098
HACI382638:1:Tyes---0
HARS204773:0:Tyes2860287285
HAUR316274:2:Tyes-0--
HCHE349521:0:Tyes5046
HDUC233412:0:Tyes-9120113
HHAL349124:0:Tyes-6410
HHEP235279:0:Tyes--8720
HINF281310:0:Tyes-310
HINF374930:0:Tyes-023
HINF71421:0:Tno-310
HMAR272569:8:Tyes-0--
HMOD498761:0:Tyes-0--
HNEP81032:0:Tyes2795-02165
HPY:0:Tno---0
HPYL357544:1:Tyes---0
HPYL85963:0:Tno---0
HSAL478009:2:Tyes-0--
HSOM205914:1:Tyes136602
HSOM228400:0:Tno150402
HSP64091:1:Tno-0--
ILOI283942:0:Tyes1420
JSP290400:1:Tyes212-1870
JSP375286:0:Tyes1329013301328
KPNE272620:2:Tyes5036
LACI272621:0:Tyes-0--
LBIF355278:2:Tyes--7070
LBIF456481:2:Tno--7290
LBOR355276:1:Tyes--02112
LBOR355277:1:Tno--20640
LCAS321967:1:Tyes-0--
LCHO395495:0:Tyes15402
LGAS324831:0:Tyes-0--
LHEL405566:0:Tyes-0--
LINN272626:1:Tno-0--
LINT189518:1:Tyes--1220
LINT267671:1:Tno--094
LINT363253:3:Tyes--0394
LJOH257314:0:Tyes-0--
LLAC272623:0:Tyes-0--
LMON169963:0:Tno-0--
LMON265669:0:Tyes-0--
LPNE272624:0:Tno1292011901291
LPNE297245:1:Fno1215011041214
LPNE297246:1:Fyes1212010901211
LPNE400673:0:Tno11213780111
LREU557436:0:Tyes-0--
LSPH444177:1:Tyes-0--
LWEL386043:0:Tyes-0--
MAQU351348:2:Tyes1620
MCAP243233:0:Tyes1188502
MCAP340047:0:Tyes-0--
MEXT419610:0:Tyes1926-26430
MFLA265072:0:Tyes1620
MLOT266835:2:Tyes0-3115858
MMAG342108:0:Tyes0-40844159
MMAR368407:0:Tyes-0--
MMAR394221:0:Tyes2564-2690
MMAZ192952:0:Tyes-0--
MMYC272632:0:Tyes-0--
MPET420662:1:Tyes16802
MSP266779:3:Tyes2845-03666
MSP400668:0:Tyes1031-10300
MSP409:2:Tyes0-61011073
MSUC221988:0:Tyes3024
MTHE264732:0:Tyes-0--
MXAN246197:0:Tyes-147634820
NARO279238:0:Tyes-762-0
NEUR228410:0:Tyes4887364880
NEUT335283:2:Tyes165129316510
NGON242231:0:Tyes23103
NHAM323097:2:Tyes0-2977288
NMEN122586:0:Tno23003
NMEN122587:0:Tyes23203
NMEN272831:0:Tno23103
NMEN374833:0:Tno23403
NMUL323848:3:Tyes5922057-0
NOCE323261:1:Tyes504163
NSEN222891:0:Tyes-0--
NSP35761:1:Tyes0---
NSP387092:0:Tyes--500
NWIN323098:0:Tyes0-2510215
OANT439375:4:Tyes237-0-
OANT439375:5:Tyes---0
OCAR504832:0:Tyes0-29013085
OIHE221109:0:Tyes-0--
OTSU357244:0:Fyes0---
PAER208963:0:Tyes4035
PAER208964:0:Tno1520
PARC259536:0:Tyes--10
PATL342610:0:Tyes3024
PCAR338963:0:Tyes2170216914
PCRY335284:1:Tyes--01
PDIS435591:0:Tyes--34030
PENT384676:0:Tyes1-02
PFLU205922:0:Tyes1520
PFLU216595:1:Tyes1520
PFLU220664:0:Tyes4035
PGIN242619:0:Tyes--01016
PHAL326442:1:Tyes1420
PING357804:0:Tyes3024
PINT246198:0:Tyes---0
PINT246198:1:Tyes--0-
PLUM243265:0:Fyes4025
PLUT319225:0:Tyes--12820
PMAR167546:0:Tyes---0
PMAR74547:0:Tyes---0
PMEN399739:0:Tyes4035
PMOB403833:0:Tyes-0--
PMUL272843:1:Tyes1420
PNAP365044:8:Tyes7240725723
PPEN278197:0:Tyes-0--
PPRO298386:2:Tyes1420
PPUT160488:0:Tno4035
PPUT351746:0:Tyes1520
PPUT76869:0:Tno4035
PRUM264731:0:Tyes--0972
PSP117:0:Tyes--02947
PSP296591:2:Tyes121302
PSP312153:0:Tyes1120320
PSP56811:2:Tyes--10
PSTU379731:0:Tyes1520
PSYR205918:0:Tyes-034
PSYR223283:2:Tyes1520
PTHE370438:0:Tyes-0--
RAKA293614:0:Fyes--5080
RALB246199:0:Tyes-0--
RBEL336407:0:Tyes--0820
RBEL391896:0:Fno--6150
RCAN293613:0:Fyes--2320
RCON272944:0:Tno--5880
RDEN375451:4:Tyes0-244320
RETL347834:5:Tyes3809-7090
REUT264198:3:Tyes148820
REUT381666:2:Tyes156520
RFEL315456:2:Tyes--0404
RFER338969:1:Tyes6800679681
RLEG216596:6:Tyes4436-7790
RMAS416276:1:Tyes--4240
RMET266264:2:Tyes151020
RPAL258594:0:Tyes0-8983448
RPAL316055:0:Tyes0-4703331
RPAL316056:0:Tyes0-44453469
RPAL316057:0:Tyes0-36893117
RPAL316058:0:Tyes0-15761488
RPOM246200:1:Tyes3308-33320
RPRO272947:0:Tyes--3320
RRIC392021:0:Fno--5620
RRIC452659:0:Tyes--5770
RRUB269796:1:Tyes3117-02572
RSOL267608:1:Tyes1444014431445
RSP357808:0:Tyes-0--
RSPH272943:4:Tyes28-02781
RSPH349101:2:Tno28-02728
RSPH349102:5:Tyes2810-02667
RTYP257363:0:Tno--3350
RXYL266117:0:Tyes-0--
SACI56780:0:Tyes-07801703
SAUR158878:1:Tno-0--
SAUR158879:1:Tno-0--
SAUR196620:0:Tno-0--
SAUR282458:0:Tno-0--
SAUR282459:0:Tno-0--
SAUR359786:1:Tno-0--
SAUR359787:1:Tno-0--
SAUR367830:3:Tno-0--
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