CANDIDATE ID: 380

CANDIDATE ID: 380

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9947767e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG10303 (fhuB) (b0153)
   Products of gene:
     - FHUB-MONOMER (FhuB)
     - ABC-11-CPLX (iron (III) hydroxamate ABC transporter)
       Reactions:
        ATP + iron (III) hydroxamate complex[periplasmic space] + H2O  ->  ADP + phosphate + iron (III) hydroxamate complex[cytosol]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]

- EG10295 (fepC) (b0588)
   Products of gene:
     - FEPC-MONOMER (FepC)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10290 (fecE) (b4287)
   Products of gene:
     - FECE-MONOMER (FecE)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10289 (fecD) (b4288)
   Products of gene:
     - FECD-MONOMER (FecD)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]



Back to top



ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 193
Effective number of orgs (counting one per cluster within 468 clusters): 122

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
VVUL196600 ncbi Vibrio vulnificus YJ0163
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1144
VCHO345073 ncbi Vibrio cholerae O3953
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169613
TLET416591 ncbi Thermotoga lettingae TMO4
TFUS269800 ncbi Thermobifida fusca YX3
TDEN243275 ncbi Treponema denticola ATCC 354053
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT23
STHE292459 ncbi Symbiobacterium thermophilum IAM 148633
SSP644076 Silicibacter sp. TrichCH4B3
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)3
SSP321327 ncbi Synechococcus sp. JA-3-3Ab3
SSP1148 ncbi Synechocystis sp. PCC 68034
SSON300269 ncbi Shigella sonnei Ss0464
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153054
SPRO399741 ncbi Serratia proteamaculans 5684
SMEL266834 ncbi Sinorhizobium meliloti 10213
SMED366394 ncbi Sinorhizobium medicae WSM4194
SHIGELLA ncbi Shigella flexneri 2a str. 2457T3
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14354
SGLO343509 ncbi Sodalis glossinidius morsitans3
SFLE373384 ncbi Shigella flexneri 5 str. 84013
SFLE198214 ncbi Shigella flexneri 2a str. 3013
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23383
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122283
SEPI176279 ncbi Staphylococcus epidermidis RP62A3
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4763
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B673
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91503
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT183
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty23
SDYS300267 ncbi Shigella dysenteriae Sd1974
SCO ncbi Streptomyces coelicolor A3(2)4
SBOY300268 ncbi Shigella boydii Sb2273
SAVE227882 ncbi Streptomyces avermitilis MA-46804
SAUR93062 ncbi Staphylococcus aureus aureus COL4
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83254
SAUR426430 ncbi Staphylococcus aureus aureus Newman4
SAUR418127 ncbi Staphylococcus aureus aureus Mu34
SAUR367830 Staphylococcus aureus aureus USA3004
SAUR359787 ncbi Staphylococcus aureus aureus JH14
SAUR359786 ncbi Staphylococcus aureus aureus JH94
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4764
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2524
SAUR273036 ncbi Staphylococcus aureus RF1224
SAUR196620 ncbi Staphylococcus aureus aureus MW24
SAUR158879 ncbi Staphylococcus aureus aureus N3154
SAUR158878 ncbi Staphylococcus aureus aureus Mu504
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99414
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170253
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170294
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.14
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332093
RETL347834 ncbi Rhizobium etli CFN 423
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30003
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a3
PSP296591 ncbi Polaromonas sp. JS6664
PPUT76869 ncbi Pseudomonas putida GB-13
PPRO298386 ncbi Photobacterium profundum SS93
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp3
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PFLU220664 ncbi Pseudomonas fluorescens Pf-53
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PCRY335284 ncbi Psychrobacter cryohalolentis K54
PAER208964 ncbi Pseudomonas aeruginosa PAO13
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA143
OIHE221109 ncbi Oceanobacillus iheyensis HTE8314
OANT439375 ncbi Ochrobactrum anthropi ATCC 491884
NSP103690 ncbi Nostoc sp. PCC 71204
NFAR247156 ncbi Nocardia farcinica IFM 101524
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MSME246196 ncbi Mycobacterium smegmatis MC2 1553
MAQU351348 ncbi Marinobacter aquaeolei VT84
LXYL281090 ncbi Leifsonia xyli xyli CTCB073
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53343
LSPH444177 ncbi Lysinibacillus sphaericus C3-414
LSAK314315 ncbi Lactobacillus sakei sakei 23K3
LPLA220668 ncbi Lactobacillus plantarum WCFS13
LMON265669 ncbi Listeria monocytogenes 4b F23653
LMON169963 ncbi Listeria monocytogenes EGD-e3
LINN272626 ncbi Listeria innocua Clip112624
KRAD266940 ncbi Kineococcus radiotolerans SRS302164
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP290400 ncbi Jannaschia sp. CCS13
HSP64091 ncbi Halobacterium sp. NRC-14
HSAL478009 ncbi Halobacterium salinarum R14
HMUK485914 ncbi Halomicrobium mukohataei DSM 122863
HMAR272569 ncbi Haloarcula marismortui ATCC 430494
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237794
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-24
GKAU235909 ncbi Geobacillus kaustophilus HTA4264
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354693
EFAE226185 ncbi Enterococcus faecalis V5833
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI13
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE113
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DRAD243230 ncbi Deinococcus radiodurans R14
DHAF138119 ncbi Desulfitobacterium hafniense Y514
DGEO319795 ncbi Deinococcus geothermalis DSM 113004
CVIO243365 ncbi Chromobacterium violaceum ATCC 124724
CTET212717 ncbi Clostridium tetani E884
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CPER289380 ncbi Clostridium perfringens SM1014
CPER195103 ncbi Clostridium perfringens ATCC 131244
CPER195102 ncbi Clostridium perfringens 134
CNOV386415 ncbi Clostridium novyi NT4
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3824
CMIC31964 ncbi Clavibacter michiganensis sepedonicus4
CJEI306537 ncbi Corynebacterium jeikeium K4114
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130323
CEFF196164 ncbi Corynebacterium efficiens YS-3143
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131293
CDIF272563 ncbi Clostridium difficile 6304
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6574
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B4
CBOT498213 ncbi Clostridium botulinum B1 str. Okra4
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall4
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193974
CBOT36826 Clostridium botulinum A4
CACE272562 ncbi Clostridium acetobutylicum ATCC 8244
BXEN266265 ncbi Burkholderia xenovorans LB4004
BWEI315730 ncbi Bacillus weihenstephanensis KBAB44
BVIE269482 ncbi Burkholderia vietnamiensis G44
BTHU412694 ncbi Bacillus thuringiensis Al Hakam4
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-274
BTHA271848 ncbi Burkholderia thailandensis E2643
BSUB ncbi Bacillus subtilis subtilis 1684
BSP36773 Burkholderia sp.4
BPUM315750 ncbi Bacillus pumilus SAFR-0324
BPSE320373 ncbi Burkholderia pseudomallei 6683
BPSE320372 ncbi Burkholderia pseudomallei 1710b3
BPSE272560 ncbi Burkholderia pseudomallei K962433
BMAL320389 ncbi Burkholderia mallei NCTC 102473
BMAL320388 ncbi Burkholderia mallei SAVP13
BMAL243160 ncbi Burkholderia mallei ATCC 233443
BLIC279010 ncbi Bacillus licheniformis ATCC 145804
BHAL272558 ncbi Bacillus halodurans C-1254
BCLA66692 ncbi Bacillus clausii KSM-K164
BCER572264 ncbi Bacillus cereus 03BB1024
BCER405917 Bacillus cereus W4
BCER315749 ncbi Bacillus cytotoxicus NVH 391-984
BCER288681 ncbi Bacillus cereus E33L4
BCER226900 ncbi Bacillus cereus ATCC 145794
BCEN331272 ncbi Burkholderia cenocepacia HI24244
BCEN331271 ncbi Burkholderia cenocepacia AU 10544
BANT592021 ncbi Bacillus anthracis A02484
BANT568206 ncbi Bacillus anthracis CDC 6844
BANT261594 ncbi Bacillus anthracis Ames Ancestor4
BANT260799 ncbi Bacillus anthracis Sterne4
BAMY326423 ncbi Bacillus amyloliquefaciens FZB424
BAMB398577 ncbi Burkholderia ambifaria MC40-64
BAMB339670 ncbi Burkholderia ambifaria AMMD4
AVAR240292 ncbi Anabaena variabilis ATCC 294134
ASP1667 Arthrobacter sp.3
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4493
AORE350688 ncbi Alkaliphilus oremlandii OhILAs4
AMAR329726 ncbi Acaryochloris marina MBIC110174
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
AAUR290340 ncbi Arthrobacter aurescens TC14


Names of the homologs of the genes in the group in each of these orgs
  EG10303   EG10295   EG10290   EG10289   
YPSE349747 YPSIP31758_3331YPSIP31758_2444YPSIP31758_2444YPSIP31758_3804
YPSE273123 YPTB0741YPTB1545YPTB1545YPTB0337
YPES386656 YPDSF_2967YPDSF_1443YPDSF_1443YPDSF_3690
YPES377628 YPN_0700YPN_2447YPN_2447YPN_3387
YPES360102 YPA_2890YPA_0827YPA_0827YPA_4002
YPES349746 YPANGOLA_A0996YPANGOLA_A3186YPANGOLA_A3186YPANGOLA_A0647
YPES214092 YPO3390YPO1533YPO1533YPO0280
YPES187410 Y0798Y2637Y2637Y0540
YENT393305 YE0732YE3621YE3621YE0328
VVUL196600 VVA1506VVA1504VVA1504
VPAR223926 VPA1438VPA1652VPA1652VPA1653
VFIS312309 VFA0160VFA0158VFA0158VFA0972
VCHO345073 VC0395_A2583VC0395_A0308VC0395_A0308
VCHO VC0203VC0779VC0779
TLET416591 TLET_1250TLET_1249TLET_1249TLET_1250
TFUS269800 TFU_0336TFU_0336TFU_2385
TDEN243275 TDE_1179TDE_0625TDE_2357
STYP99287 STM0194STM0590STM0590
STHE292459 STH1283STH1283STH1285
SSP644076 SCH4B_3664SCH4B_3664SCH4B_3538
SSP321332 CYB_2728CYB_2728CYB_2729
SSP321327 CYA_2032CYA_2032CYA_2033
SSP1148 SLR1316SLR1318SLR1318SLR1317
SSON300269 SSO_0165SSO_0539SSO_4459SSO_4460
SSAP342451 SSP2072SSP2073SSP2073SSP0711
SPRO399741 SPRO_3976SPRO_3426SPRO_3426SPRO_2166
SMEL266834 SMA1741SMA1741SMC01511
SMED366394 SMED_2493SMED_2494SMED_2494SMED_4080
SHIGELLA FHUBFEPCFEPC
SHAE279808 SH2246SH2247SH2247SH0865
SGLO343509 SGP1_0036SGP1_0035SGP1_0035
SFLE373384 SFV_0138SFV_0536SFV_0536
SFLE198214 AAN41808.1AAN42151.1AAN42151.1
SERY405948 SACE_0413SACE_0413SACE_4374
SEPI176280 SE_0421SE_0421SE_1766
SEPI176279 SERP0306SERP0306SERP1775
SENT454169 SEHA_C0227SEHA_C0702SEHA_C0702
SENT321314 SCH_0194SCH_0621SCH_0621
SENT295319 SPA0200SPA2144SPA2144
SENT220341 STY0221STY0634STY0634
SENT209261 T0202T2278T2278
SDYS300267 SDY_0169SDY_0519SDY_4293SDY_4294
SCO SCO7398SCO1785SCO0495SCO0997
SBOY300268 SBO_0142SBO_0449SBO_0449
SAVE227882 SAV601SAV6493SAV6493SAV6492
SAUR93062 SACOL2166SACOL0704SACOL0704SACOL2165
SAUR93061 SAOUHSC_02428SAOUHSC_00652SAOUHSC_00652SAOUHSC_02427
SAUR426430 NWMN_2077NWMN_0616NWMN_0616NWMN_2076
SAUR418127 SAHV_2160SAHV_0644SAHV_0644SAHV_2159
SAUR367830 SAUSA300_2135SAUSA300_0633SAUSA300_0633SAUSA300_2134
SAUR359787 SAURJH1_2245SAURJH1_0685SAURJH1_0685SAURJH1_2244
SAUR359786 SAURJH9_2207SAURJH9_0670SAURJH9_0670SAURJH9_2206
SAUR282459 SAS2077SAS0612SAS0612SAS2076
SAUR282458 SAR0658SAR0657SAR0657SAR2266
SAUR273036 SAB2057CSAB0596SAB0596SAB2056C
SAUR196620 MW2102MW0609MW0609MW2101
SAUR158879 SA1978SA0602SA0602SA1977
SAUR158878 SAV2176SAV0647SAV0647SAV2175
RXYL266117 RXYL_0415RXYL_0416RXYL_0416RXYL_0415
RSPH349102 RSPH17025_3334RSPH17025_3334RSPH17025_1384
RSPH349101 RSPH17029_0087RSPH17029_3058RSPH17029_3058RSPH17029_3060
RSPH272943 RSP_1438RSP_3413RSP_3413RSP_3415
RSAL288705 RSAL33209_2062RSAL33209_2862RSAL33209_1681
RETL347834 RHE_PF00465RHE_PE00282RHE_CH03270
PSYR223283 PSPTO_0760PSPTO_0760PSPTO_0761
PSYR205918 PSYR_2593PSYR_0664PSYR_0665
PSP296591 BPRO_4778BPRO_4777BPRO_4777BPRO_4778
PPUT76869 PPUTGB1_1803PPUTGB1_1803PPUTGB1_1805
PPRO298386 PBPRA1563PBPRB1814PBPRB1814
PMUL272843 PM0129PM0128PM0128PM0129
PMEN399739 PMEN_3768PMEN_2860PMEN_2866
PLUM243265 PLU4448PLU4626PLU4450PLU4449
PFLU220664 PFL_3622PFL_3622PFL_3624
PFLU216595 PFLU4090PFLU4088PFLU4088PFLU4089
PCRY335284 PCRYO_1284PCRYO_1285PCRYO_1285PCRYO_1284
PAER208964 PA4158PA4158PA4160
PAER208963 PA14_10180PA14_10180PA14_10160
OIHE221109 OB0452OB0262OB0450OB0453
OANT439375 OANT_2778OANT_4085OANT_4085OANT_2826
NSP103690 ALL0387ALL2584ALL2584ALL2585
NFAR247156 NFA18240NFA25190NFA25190NFA18240
MSP400668 MMWYL1_1008MMWYL1_3639MMWYL1_0690MMWYL1_0691
MSP266779 MESO_0135MESO_0136MESO_0136MESO_1443
MSME246196 MSMEG_0015MSMEG_0015MSMEG_6063
MAQU351348 MAQU_2190MAQU_3299MAQU_3299MAQU_0275
LXYL281090 LXX17240LXX17230LXX17230
LWEL386043 LWE1986LWE1986LWE2377
LSPH444177 BSPH_1674BSPH_1675BSPH_1675BSPH_0992
LSAK314315 LSA0402LSA0400LSA0402
LPLA220668 LP_3104LP_3104LP_3106
LMON265669 LMOF2365_1990LMOF2365_1990LMOF2365_2401
LMON169963 LMO1960LMO1960LMO2430
LINN272626 LIN2071LIN2074LIN2074LIN2524
KRAD266940 KRAD_1240KRAD_1239KRAD_1239KRAD_1240
KPNE272620 GKPORF_B4457GKPORF_B5025GKPORF_B5025GKPORF_B2423
JSP290400 JANN_2124JANN_2125JANN_2135
HSP64091 VNG2560GVNG2558GVNG2558GVNG1370G
HSAL478009 OE4591ROE4587ROE4587ROE2952F
HMUK485914 HMUK_2443HMUK_2442HMUK_2442
HMAR272569 PNG7275PNG7276PNG7276RRNAC3374
HCHE349521 HCH_01394HCH_03795HCH_03795HCH_03457
HAUR316274 HAUR_1736HAUR_1737HAUR_1737HAUR_1736
GTHE420246 GTNG_1319GTNG_1320GTNG_0175GTNG_1319
GKAU235909 GK1460GK1461GK1461GK1460
ESP42895 ENT638_0693ENT638_1120ENT638_1120ENT638_1738
EFER585054 EFER_0176EFER_2506EFER_2506
EFAE226185 EF_0193EF_0191EF_0192
ECOO157 FHUBFEPCFEPCZ4384
ECOL83334 ECS0157ECS0627ECS0627ECS3915
ECOL585397 ECED1_0159ECED1_0585ECED1_5151ECED1_5153
ECOL585057 ECIAI39_0157ECIAI39_0565ECIAI39_4765ECIAI39_4766
ECOL585056 ECUMN_0150ECUMN_0682ECUMN_4855ECUMN_4857
ECOL585055 EC55989_0147EC55989_0580EC55989_4959EC55989_4961
ECOL585035 ECS88_0164ECS88_0627ECS88_4860ECS88_4861
ECOL585034 ECIAI1_0151ECIAI1_0572ECIAI1_0572
ECOL481805 ECOLC_3506ECOLC_3056ECOLC_0739ECOLC_0740
ECOL469008 ECBD_3465ECBD_3067ECBD_3751ECBD_3750
ECOL439855 ECSMS35_0165ECSMS35_0607ECSMS35_0607ECSMS35_3321
ECOL413997 ECB_00152ECB_00555ECB_04153ECB_04154
ECOL409438 ECSE_0154ECSE_0655ECSE_0655
ECOL405955 APECO1_1832APECO1_1461APECO1_1461APECO1_3386
ECOL364106 UTI89_C0169UTI89_C0590UTI89_C0590UTI89_C3461
ECOL362663 ECP_0163ECP_0620ECP_0620ECP_3119
ECOL331111 ECE24377A_0158ECE24377A_0607ECE24377A_4864ECE24377A_4865
ECOL316407 ECK0152:JW0149:B0153ECK0581:JW0580:B0588ECK4277:JW4247:B4287ECK4278:JW4248:B4288
ECOL199310 C0188C0675C0675C3773
ECAR218491 ECA3310ECA2806ECA1073ECA1074
DRAD243230 DR_B0122DR_B0121DR_B0121DR_B0122
DHAF138119 DSY3873DSY1005DSY3570DSY3571
DGEO319795 DGEO_2758DGEO_2759DGEO_2759DGEO_2758
CVIO243365 CV_1794CV_2234CV_2234CV_1794
CTET212717 CTC_01196CTC_01197CTC_01197CTC_01196
CSP501479 CSE45_0698CSE45_0698CSE45_1083
CSAL290398 CSAL_1049CSAL_2702CSAL_2702CSAL_1041
CPER289380 CPR_0796CPR_0797CPR_0797CPR_0796
CPER195103 CPF_0809CPF_0810CPF_0810CPF_0809
CPER195102 CPE0812CPE0813CPE0813CPE0812
CNOV386415 NT01CX_1447NT01CX_1448NT01CX_1448NT01CX_1447
CMIC443906 CMM_0167CMM_2928CMM_2928CMM_2350
CMIC31964 CMS0337CMS3063CMS3063CMS1571
CJEI306537 JK1294JK1818JK1806JK1294
CGLU196627 CG0589CG0589CG0778
CEFF196164 CE0684CE0684CE0694
CDIP257309 DIP1059DIP1059DIP0584
CDIF272563 CD2876CD2875CD2875CD2876
CBOT536232 CLM_0381CLM_0381CLM_0805
CBOT515621 CLJ_B0364CLJ_B0366CLJ_B0366CLJ_B0760
CBOT508765 CLL_A2114CLL_A2113CLL_A2113CLL_A2114
CBOT498213 CLD_0442CLD_0440CLD_0440CLD_0078
CBOT441772 CLI_0381CLI_0383CLI_0383CLI_0757
CBOT441771 CLC_0369CLC_0371CLC_0371CLC_0742
CBOT441770 CLB_0354CLB_0356CLB_0356CLB_0727
CBOT36826 CBO0311CBO0313CBO0313CBO0688
CACE272562 CAC0788CAC0791CAC0791CAC0788
BXEN266265 BXE_B0521BXE_B0520BXE_B0520BXE_B0521
BWEI315730 BCERKBAB4_4357BCERKBAB4_0532BCERKBAB4_5174BCERKBAB4_5175
BVIE269482 BCEP1808_1581BCEP1808_1580BCEP1808_1580BCEP1808_1581
BTHU412694 BALH_4114BALH_0556BALH_4877BALH_4879
BTHU281309 BT9727_4265BT9727_0528BT9727_5061BT9727_5062
BTHA271848 BTH_I2423BTH_I2424BTH_I2424
BSUB BSU33300BSU32940BSU33290BSU07500
BSP36773 BCEP18194_A4782BCEP18194_A4781BCEP18194_A4781BCEP18194_A4782
BPUM315750 BPUM_2991BPUM_2949BPUM_2990BPUM_2991
BPSE320373 BURPS668_1921BURPS668_1920BURPS668_1920
BPSE320372 BURPS1710B_A2242BURPS1710B_A2241BURPS1710B_A2241
BPSE272560 BPSL1783BPSL1784BPSL1784
BMAL320389 BMA10247_0868BMA10247_0867BMA10247_0867
BMAL320388 BMASAVP1_A1630BMASAVP1_A1631BMASAVP1_A1631
BMAL243160 BMA_1187BMA_1188BMA_1188
BLIC279010 BL00704BL02183BL00705BL01088
BHAL272558 BH1038BH1039BH1081BH1082
BCLA66692 ABC3751ABC1084ABC1084ABC1083
BCER572264 BCA_4636BCA_0652BCA_5531BCA_5532
BCER405917 BCE_0685BCE_0686BCE_5510BCE_5511
BCER315749 BCER98_3903BCER98_3902BCER98_3902BCER98_3903
BCER288681 BCE33L0527BCE33L0528BCE33L5078BCE33L5079
BCER226900 BC_0618BC_0619BC_5381BC_5382
BCEN331272 BCEN2424_1636BCEN2424_1635BCEN2424_1635BCEN2424_1636
BCEN331271 BCEN_1156BCEN_1155BCEN_1155BCEN_1156
BANT592021 BAA_4782BAA_0700BAA_5655BAA_5656
BANT568206 BAMEG_4801BAMEG_3969BAMEG_5673BAMEG_5674
BANT261594 GBAA4767GBAA0618GBAA5629GBAA5630
BANT260799 BAS4425BAS0584BAS5230BAS5231
BAMY326423 RBAM_030420RBAM_030060RBAM_030410RBAM_030420
BAMB398577 BAMMC406_1554BAMMC406_1553BAMMC406_1553BAMMC406_1554
BAMB339670 BAMB_1533BAMB_1532BAMB_1532BAMB_1533
AVAR240292 AVA_2828AVA_2830AVA_2830AVA_2828
ASP1667 ARTH_3932ARTH_3932ARTH_3934
ASAL382245 ASA_4367ASA_1847ASA_1847
AORE350688 CLOS_0311CLOS_2428CLOS_2810CLOS_0319
AMAR329726 AM1_A0162AM1_A0161AM1_A0161AM1_A0162
ACAU438753 AZC_3249AZC_0183AZC_0183
AAUR290340 AAUR_2017AAUR_0557AAUR_3763AAUR_3765


Organism features enriched in list (features available for 184 out of the 193 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 7.293e-81617
Arrangment:Pairs 7.414e-1368112
Disease:Anthrax 0.009701144
Disease:Botulism 0.003015955
Disease:Bubonic_plague 0.000934066
Disease:Dysentery 0.000934066
Disease:Gastroenteritis 0.0045033913
Disease:Opportunistic_infections 0.003015955
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 2.509e-61111
Disease:Urinary_tract_infection 0.009701144
Endospores:Yes 5.419e-124053
GC_Content_Range4:0-40 0.001335352213
GC_Content_Range7:30-40 0.002256939166
GC_Content_Range7:50-60 0.001952846107
GC_Content_Range7:70-100 0.0048701811
Genome_Size_Range5:0-2 1.753e-291155
Genome_Size_Range5:4-6 9.582e-1192184
Genome_Size_Range5:6-10 3.524e-73147
Genome_Size_Range9:1-2 2.701e-231128
Genome_Size_Range9:4-5 8.362e-75196
Genome_Size_Range9:5-6 0.00055084188
Genome_Size_Range9:6-8 6.011e-62538
Gram_Stain:Gram_Neg 0.004511292333
Gram_Stain:Gram_Pos 2.078e-977150
Habitat:Aquatic 0.00008441491
Habitat:Host-associated 0.000446648206
Habitat:Multiple 7.722e-986178
Habitat:Terrestrial 0.00033061931
Motility:Yes 1.827e-6110267
Optimal_temp.:25-35 0.0087380914
Optimal_temp.:30-37 5.329e-101818
Oxygen_Req:Anaerobic 0.000616519102
Oxygen_Req:Facultative 9.480e-1198201
Pathogenic_in:Animal 0.00451803066
Pathogenic_in:Human 1.722e-795213
Pathogenic_in:No 0.000244353226
Shape:Rod 1.877e-12147347
Shape:Spiral 0.0000270134
Temp._range:Hyperthermophilic 0.0014874123
Temp._range:Mesophilic 0.0000383166473



Back to top



ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 388
Effective number of orgs (counting one per cluster within 468 clusters): 324

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP292414 ncbi Ruegeria sp. TM10400
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2171
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1851
SBAL399599 ncbi Shewanella baltica OS1951
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP357808 ncbi Roseiflexus sp. RS-11
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111701
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H161
REUT264198 ncbi Ralstonia eutropha JMP1340
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1251
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL11
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054761
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse1
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-11
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCAN483179 ncbi Brucella canis ATCC 233651
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5831
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK21
ABAU360910 ncbi Bordetella avium 197N1
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10303   EG10295   EG10290   EG10289   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
TVOL273116
TTUR377629
TTHE300852
TTHE262724 TT_P0178
TTEN273068 TTE1868
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TERY203124
TELO197221
TDEN326298
TDEN292415
TCRU317025
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296 SSU98_0651
SSUI391295
SSP94122 SHEWANA3_3240
SSP84588
SSP64471
SSP387093
SSP292414
SSP1131
SSOL273057
SSED425104
SRUB309807 SRU_1224
SPEA398579 SPEA_3381
SONE211586 SO_3674
SMUT210007
SMAR399550
SLOI323850 SHEW_0713
SHAL458817 SHAL_3459
SGOR29390
SFUM335543 SFUM_2134
SELO269084
SDEN318161 SDEN_1117
SDEG203122
SBAL402882 SHEW185_1016
SBAL399599 SBAL195_1049
SALA317655
SACI56780 SYN_01427
SACI330779
RTYP257363
RSP357808 ROSERS_3566
RSOL267608
RRUB269796 RRU_A0490
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057 RPD_2349
RPAL316056
RPAL316055
RPAL258594
RMET266264 RMET_2788
RMAS416276
RFER338969
RFEL315456
REUT381666 H16_A2971
REUT264198
RDEN375451
RCON272944
RCAS383372 RCAS_4371
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811 PSYCPRWF_1104
PSP312153
PSP117
PRUM264731
PPUT351746
PPUT160488
PPEN278197
PNAP365044
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PING357804 PING_3342
PHOR70601 PH1236
PHAL326442 PSHAA2565
PGIN242619
PFUR186497 PF0910
PFLU205922
PENT384676
PDIS435591
PCAR338963
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844 PAB0677
OTSU357244
OCAR504832 OCAR_4887
NWIN323098
NSP387092
NSP35761
NSEN222891
NPHA348780 NP3816A
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732 MOTH_1465
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988 MS1203
MSTA339860
MSP409
MSP189918
MSP164757
MSP164756
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221 MMAR10_2512
MMAR368407
MMAR267377
MMAG342108
MLOT266835 MLL1150
MLEP272631
MLAB410358 MLAB_1378
MKAN190192
MJAN243232 MJ_0087
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LLAC272623 L128386
LLAC272622 LACR_0373
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
ILOI283942
IHOS453591
HWAL362976
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761
HINF71421
HINF374930 CGSHIEE_08785
HINF281310
HHEP235279
HHAL349124 HHAL_1922
HDUC233412
HBUT415426
HARS204773
HACI382638
GVIO251221 GLL0579
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370 FRANCCI3_4241
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470 CBDBA635
DSP216389 DEHABAV1_0621
DSHI398580 DSHI_0572
DRED349161
DPSY177439
DOLE96561
DNOD246195
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_2393
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJAP155077
CHYD246194
CHUT269798 CHU_1389
CHOM360107
CFET360106
CFEL264202
CDES477974 DAUD_1316
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTRI382640 BT_0771
BTHE226186
BSUI470137 BSUIS_A1396
BSUI204722 BR_1345
BSP376
BSP107806
BQUI283165 BQ04130
BPET94624 BPET4208
BPER257313
BPAR257311
BOVI236 GBOORF1356
BMEL359391 BAB1_1365
BMEL224914 BMEI0659
BLON206672
BJAP224911
BHER314723
BHEN283166 BH04940
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BCAN483179 BCAN_A1372
BBUR224326
BBRO257310
BBAC360095 BARBAKC583_0456
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977
ASP62928
ASP232721
APLE434271 APJL_2065
APLE416269 APL_2015
APHA212042
APER272557
AMAR234826
ALAI441768
AFUL224325
AFER243159
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABOR393595 ABO_2369
ABAU360910 BAV2654
ABAC204669
AAVE397945
AAEO224324


Organism features enriched in list (features available for 362 out of the 388 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 5.620e-63892
Arrangment:Pairs 9.229e-943112
Disease:Gastroenteritis 0.0038718313
Disease:Pneumonia 0.0080218312
Endospores:Yes 1.619e-111053
GC_Content_Range7:50-60 0.006424056107
GC_Content_Range7:70-100 0.0031864211
Genome_Size_Range5:0-2 1.508e-19140155
Genome_Size_Range5:4-6 1.855e-884184
Genome_Size_Range5:6-10 5.064e-71347
Genome_Size_Range9:0-1 0.00026552527
Genome_Size_Range9:1-2 3.876e-15115128
Genome_Size_Range9:4-5 0.00003144296
Genome_Size_Range9:5-6 0.00112284288
Genome_Size_Range9:6-8 0.00001511138
Gram_Stain:Gram_Neg 5.082e-7235333
Gram_Stain:Gram_Pos 3.784e-1947150
Habitat:Aquatic 0.00003237391
Habitat:Multiple 2.838e-686178
Habitat:Specialized 0.00616064153
Habitat:Terrestrial 0.00040051031
Motility:No 0.005759082151
Motility:Yes 0.0017792150267
Optimal_temp.:35-37 0.00187661313
Oxygen_Req:Aerobic 0.0061143127185
Oxygen_Req:Anaerobic 0.000022181102
Oxygen_Req:Facultative 4.395e-1778201
Oxygen_Req:Microaerophilic 0.00995121618
Pathogenic_in:Human 2.911e-1195213
Pathogenic_in:No 0.0000475162226
Salinity:Non-halophilic 0.005223855106
Shape:Coccobacillus 0.00498921111
Shape:Coccus 0.00149633982
Shape:Irregular_coccus 0.00284461617
Shape:Rod 3.323e-6190347
Shape:Sphere 0.00681101719
Shape:Spiral 1.131e-63334
Temp._range:Hyperthermophilic 0.00140132123
Temp._range:Mesophilic 5.281e-7272473



Back to top



ORGANISMS ENRICHED FOR GROUP:




Back to top



ORGANISMS DEPLETED FOR GROUP:




Back to top



PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241400.5108
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121930.4871
IDNCAT-PWY (L-idonate degradation)2461430.4743
RIBOKIN-PWY (ribose degradation)2791540.4717
GALACTITOLCAT-PWY (galactitol degradation)73640.4467
GLUTAMINDEG-PWY (glutamine degradation I)1911170.4354
GLUAMCAT-PWY (N-acetylglucosamine degradation I)3561710.4259
PWY-6196 (serine racemization)102760.4165
MANNIDEG-PWY (mannitol degradation I)99740.4114
PWY-3722 (glycine betaine biosynthesis II (Gram-positive bacteria))141930.4091
PWY-6406 (salicylate biosynthesis I)1881120.4065
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)2701410.4018



Back to top



PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10295   EG10290   EG10289   
EG103030.9994150.999410.999343
EG102950.9998450.999316
EG102900.999537
EG10289



Back to top



PAIRWISE BLAST SCORES:

  EG10303   EG10295   EG10290   EG10289   
EG103030.0f0--2.1e-36
EG10295-0.0f07.3e-55-
EG10290-3.2e-540.0f0-
EG10289---0.0f0



Back to top



PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2001 (ferric dicitrate uptake system) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.500, average score: 0.720)
  Genes in pathway or complex:
             0.9652 0.9083 EG10286 (fecA) EG10286-MONOMER (outer membrane receptor; citrate-dependent iron transport, outer membrane receptor)
             0.4063 0.2289 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.2664 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.6291 0.4139 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
             0.9993 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9993 EG10289 (fecD) FECD-MONOMER (FecD)
             0.9991 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9995 0.9993 EG10303 (fhuB) FHUB-MONOMER (FhuB)

- ABC-9-CPLX (iron dicitrate ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
             0.9991 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
   *in cand* 0.9995 0.9993 EG10289 (fecD) FECD-MONOMER (FecD)
             0.9993 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9995 0.9993 EG10303 (fhuB) FHUB-MONOMER (FhuB)



Back to top



GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10289 EG10290 (centered at EG10289)
EG10295 (centered at EG10295)
EG10303 (centered at EG10303)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10303   EG10295   EG10290   EG10289   
201/623223/623227/623205/623
AAUR290340:2:Tyes1424031353137
ABAU360910:0:Tyes--0-
ABOR393595:0:Tyes0---
ACAU438753:0:Tyes310300-
AEHR187272:0:Tyes0--0
AHYD196024:0:Tyes2201-0-
AMAR329726:8:Tyes1001
AMET293826:0:Tyes-00-
ANAE240017:0:Tyes-11870-
AORE350688:0:Tyes0218525668
APLE416269:0:Tyes0---
APLE434271:0:Tno0---
ASAL382245:5:Tyes242900-
ASP1667:3:Tyes-002
ASP76114:2:Tyes0--0
AVAR240292:3:Tyes0220
BABO262698:0:Tno--0-
BABO262698:1:Tno---0
BAMB339670:3:Tno1001
BAMB398577:3:Tno1001
BAMY326423:0:Tyes3603536
BANT260799:0:Tno3836046584659
BANT261594:2:Tno3811046224623
BANT568206:2:Tyes799016351636
BANT592021:2:Tno4014048524853
BBAC360095:0:Tyes---0
BCAN483179:1:Tno---0
BCEN331271:2:Tno1001
BCEN331272:3:Tyes1001
BCER226900:1:Tyes0146614662
BCER288681:0:Tno0145674568
BCER315749:1:Tyes1001
BCER405917:1:Tyes0145744575
BCER572264:1:Tno3912047714772
BCLA66692:0:Tyes2696110
BHAL272558:0:Tyes014344
BHEN283166:0:Tyes---0
BLIC279010:0:Tyes2327228023260
BMAL243160:1:Tno011-
BMAL320388:1:Tno011-
BMAL320389:1:Tyes100-
BMEL224914:1:Tno---0
BMEL359391:1:Tno---0
BOVI236:1:Tyes---0
BPET94624:0:Tyes0---
BPSE272560:1:Tyes011-
BPSE320372:1:Tno100-
BPSE320373:1:Tno100-
BPUM315750:0:Tyes4204142
BQUI283165:0:Tyes---0
BSP36773:2:Tyes1001
BSUB:0:Tyes2730269227290
BSUI204722:1:Tyes---0
BSUI470137:1:Tno---0
BTHA271848:1:Tno011-
BTHU281309:1:Tno3705044964497
BTHU412694:1:Tno3403041564157
BTRI382640:1:Tyes---0
BVIE269482:7:Tyes1001
BWEI315730:4:Tyes3746045754576
BXEN266265:1:Tyes0110
CACE272562:1:Tyes0330
CBEI290402:0:Tyes-15710-
CBOT36826:1:Tno022374
CBOT441770:0:Tyes022361
CBOT441771:0:Tno022362
CBOT441772:1:Tno022361
CBOT498213:1:Tno022356
CBOT508765:1:Tyes1001
CBOT515621:2:Tyes022381
CBOT536232:0:Tno-00407
CDES477974:0:Tyes---0
CDIF272563:1:Tyes1001
CDIP257309:0:Tyes-4684680
CEFF196164:0:Fyes-0010
CGLU196627:0:Tyes-00169
CHUT269798:0:Tyes0---
CJEI306537:0:Tyes05355230
CMIC31964:2:Tyes0260226021195
CMIC443906:2:Tyes0282028202230
CNOV386415:0:Tyes0110
CPER195102:1:Tyes0110
CPER195103:0:Tno0110
CPER289380:3:Tyes0110
CPHY357809:0:Tyes0---
CSAL290398:0:Tyes8169116910
CSP501479:8:Fyes-00379
CTET212717:0:Tyes0110
CVIO243365:0:Tyes04464460
DGEO319795:0:Tyes1001
DHAF138119:0:Tyes2904026012602
DRAD243230:1:Tyes1001
DSHI398580:5:Tyes---0
DSP216389:0:Tyes---0
DSP255470:0:Tno---0
ECAR218491:0:Tyes2255173901
ECOL199310:0:Tno04684683505
ECOL316407:0:Tno043041164117
ECOL331111:6:Tno042645064507
ECOL362663:0:Tno04524522952
ECOL364106:1:Tno04184183285
ECOL405955:2:Tyes03803802962
ECOL409438:6:Tyes0510510-
ECOL413997:0:Tno040540414042
ECOL439855:4:Tno04284283051
ECOL469008:0:Tno4010680679
ECOL481805:0:Tno2780232901
ECOL585034:0:Tno0413413-
ECOL585035:0:Tno045145264527
ECOL585055:0:Tno042847354737
ECOL585056:2:Tno052946904692
ECOL585057:0:Tno040246144615
ECOL585397:0:Tno040048364838
ECOL83334:0:Tno04804803847
ECOLI:0:Tno044342104211
ECOO157:0:Tno04774773855
EFAE226185:3:Tyes20-1
EFER585054:1:Tyes023112311-
ESP42895:1:Tyes04284281060
FALN326424:0:Tyes-00-
FSP106370:0:Tyes0---
FSP1855:0:Tyes-00-
GKAU235909:1:Tyes0110
GTHE420246:1:Tyes1130113101130
GVIO251221:0:Tyes---0
HAUR316274:2:Tyes0110
HCHE349521:0:Tyes0229322931971
HHAL349124:0:Tyes---0
HINF374930:0:Tyes0---
HMAR272569:7:Tyes011-
HMAR272569:8:Tyes---0
HMUK485914:1:Tyes100-
HSAL478009:4:Tyes9639629620
HSP64091:2:Tno9399389380
JSP290400:1:Tyes01-11
KPNE272620:2:Tyes1983254025400
KRAD266940:2:Fyes0110
LINN272626:1:Tno033474
LLAC272622:5:Tyes0---
LLAC272623:0:Tyes0---
LMON169963:0:Tno-00494
LMON265669:0:Tyes-00407
LPLA220668:0:Tyes-002
LSAK314315:0:Tyes2-02
LSPH444177:1:Tyes6666676670
LWEL386043:0:Tyes-00391
LXYL281090:0:Tyes100-
MAQU351348:2:Tyes1888298929890
MJAN243232:2:Tyes0---
MLAB410358:0:Tyes--0-
MLOT266835:2:Tyes0---
MMAR394221:0:Tyes0---
MSME246196:0:Tyes-005996
MSP266779:3:Tyes0111319
MSP400668:0:Tyes316299601
MSUC221988:0:Tyes0---
MTHE264732:0:Tyes0---
NFAR247156:2:Tyes07017010
NPHA348780:2:Tyes---0
NSP103690:6:Tyes0221622162217
OANT439375:4:Tyes01301130148
OCAR504832:0:Tyes0---
OIHE221109:0:Tyes1900188191
PABY272844:0:Tyes---0
PACN267747:0:Tyes344--0
PAER208963:0:Tyes-220
PAER208964:0:Tno-002
PCRY335284:1:Tyes0110
PFLU216595:1:Tyes2001
PFLU220664:0:Tyes-002
PFUR186497:0:Tyes0---
PHAL326442:1:Tyes0---
PHOR70601:0:Tyes---0
PING357804:0:Tyes---0
PLUM243265:0:Fyes018421
PMEN399739:0:Tyes9130-6
PMUL272843:1:Tyes1001
PPRO298386:1:Tyes-00-
PPRO298386:2:Tyes0---
PPUT76869:0:Tno-002
PSP296591:2:Tyes1001
PSP56811:2:Tyes0---
PSYR205918:0:Tyes-193101
PSYR223283:2:Tyes-001
RCAS383372:0:Tyes---0
RETL347834:3:Tyes--0-
RETL347834:4:Tyes0---
RETL347834:5:Tyes---0
REUT381666:2:Tyes---0
RLEG216596:3:Tyes0---
RLEG216596:6:Tyes---0
RMET266264:2:Tyes---0
RPAL316057:0:Tyes---0
RRUB269796:1:Tyes---0
RSAL288705:0:Tyes38111810-
RSP101510:3:Fyes-00-
RSP357808:0:Tyes---0
RSPH272943:3:Tyes-002
RSPH272943:4:Tyes0---
RSPH349101:1:Tno-002
RSPH349101:2:Tno0---
RSPH349102:4:Tyes-00-
RSPH349102:5:Tyes---0
RXYL266117:0:Tyes0110
SACI56780:0:Tyes0---
SAGA205921:0:Tno-00-
SAGA208435:0:Tno-00-
SAGA211110:0:Tyes-00-
SARE391037:0:Tyes-00-
SAUR158878:1:Tno1585001584
SAUR158879:1:Tno1490001489
SAUR196620:0:Tno1551001550
SAUR273036:0:Tno1473001472
SAUR282458:0:Tno1001595
SAUR282459:0:Tno1518001517
SAUR359786:1:Tno1573001572
SAUR359787:1:Tno1531001530
SAUR367830:3:Tno1435001434
SAUR418127:0:Tyes1575001574
SAUR426430:0:Tno1516001515
SAUR93061:0:Fno1738001737
SAUR93062:1:Tno1426001425
SAVE227882:1:Fyes0596859685967
SBAL399599:3:Tyes---0
SBAL402882:1:Tno---0
SBOY300268:1:Tyes0287287-
SCO:2:Fyes694412950496
SDEN318161:0:Tyes0---
SDYS300267:1:Tyes033038653866
SENT209261:0:Tno019741974-
SENT220341:0:Tno0365365-
SENT295319:0:Tno018611861-
SENT321314:2:Tno0435435-
SENT454169:2:Tno0459459-
SEPI176279:1:Tyes-001439
SEPI176280:0:Tno-001402
SERY405948:0:Tyes-003912
SFLE198214:0:Tyes0354354-
SFLE373384:0:Tno0376376-
SFUM335543:0:Tyes---0
SGLO343509:2:Tyes100-
SHAE279808:0:Tyes1429143014300
SHAL458817:0:Tyes0---
SHIGELLA:0:Tno0343343-
SLAC55218:1:Fyes-00-
SLOI323850:0:Tyes0---
SMED366394:2:Tyes---0
SMED366394:3:Tyes011-
SMEL266834:0:Tyes-00-
SMEL266834:2:Tyes---0
SONE211586:1:Tyes---0
SPEA398579:0:Tno0---
SPNE1313:0:Tyes-00-
SPNE170187:0:Tyes-00-
SPNE171101:0:Tno-00-
SPNE487213:0:Tno-00-
SPNE487214:0:Tno-00-
SPNE488221:0:Tno-00-
SPRO399741:1:Tyes1833127712770
SPYO160490:0:Tno-00-
SPYO186103:0:Tno-00-
SPYO193567:0:Tno-00-
SPYO198466:0:Tno-00-
SPYO286636:0:Tno-00-
SPYO293653:0:Tno-00-
SPYO319701:0:Tyes-00-
SPYO370551:0:Tno-00-
SPYO370552:0:Tno-00-
SPYO370553:0:Tno-00-
SPYO370554:0:Tyes-00-
SRUB309807:1:Tyes---0
SSAP342451:2:Tyes1410141114110
SSON300269:1:Tyes035540684069
SSP1148:0:Tyes0221
SSP321327:0:Tyes-001
SSP321332:0:Tyes-001
SSP644076:3:Fyes-1241240
SSP94122:1:Tyes---0
SSUI391296:0:Tyes--0-
STHE292459:0:Tyes-002
STRO369723:0:Tyes-9100-
STYP99287:1:Tyes0393393-
TDEN243275:0:Tyes5480-1718
TFUS269800:0:Tyes-002075
TKOD69014:0:Tyes0--0
TLET416591:0:Tyes1001
TTEN273068:0:Tyes0---
TTHE262724:0:Tyes---0
TWHI203267:0:Tyes-00-
TWHI218496:0:Tno-00-
UMET351160:0:Tyes0--0
VCHO:0:Tyes0614614-
VCHO345073:1:Tno219900-
VFIS312309:1:Tyes200814
VPAR223926:0:Tyes0214214215
VVUL196600:1:Tyes200-
VVUL216895:0:Tno2-0-
XAUT78245:1:Tyes0--1416
YENT393305:1:Tyes386318931890
YPES187410:5:Tno263210421040
YPES214092:3:Tno2978121112110
YPES349746:2:Tno340247924790
YPES360102:3:Tyes2091003223
YPES377628:2:Tno0177817782740
YPES386656:2:Tno1535002274
YPSE273123:2:Tno410123212320
YPSE349747:2:Tno875001347



Back to top